>Q05580:YD266_YEAST Zinc finger protein YDR266C - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 639
 Score = 36.2 bits (82), Expect = 0.58
 Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 3/185 (1%)
 Frame = -3

Query: 2157 GFNSGARSSS*ITHKPDSTSLQTAQKQSYYTSIESS*PKKQERRRTKHIE---KGLYSQT 1987
            G +SG+R+       P+ + L+ A++  YY  +E+S  K+   + + + E   KG  S  
Sbjct: 349  GSSSGSRTDVRSASSPEESRLRLAERAKYY--LENS--KEDFNKFSSYNEDYSKGRLSAE 404

Query: 1986 QINQQPYSIFTSLNHT*HLYIFLSSNTLPIKPNPRSKDSTGHRSLFNSSYSTPQQSSACY 1807
            ++ +    +FT  N   +L I   + T P       K+S+ + +L N+ Y   +Q+ A  
Sbjct: 405  KLLESYKLLFTKPNADVYLLIHNLAETFP-------KNSSKYNNL-NAIYEQREQTLARQ 456

Query: 1806 TGITSMSEVSSHLTTSPSRFAGKKQVPHWQPDEMGSDGGTIINTLSFF*TTPITLTVLPS 1627
            T + S+S  SS L+ S  R        HW     G   G  +   +        +  LP+
Sbjct: 457  TSLPSLSSDSS-LSMSIGR-------GHWGGTNDGGSAGAALGVRN--------IKNLPT 500

Query: 1626 LMYPS 1612
            L  PS
Sbjct: 501  LKSPS 505

>O75154:RFIP3_HUMAN Rab11 family-interacting protein 3 - Homo sapiens (Human)|
          Length = 756

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 25/77 (32%), Positives = 30/77 (38%)
 Frame = -3

Query: 894 PDTFLLGAPDEFSGPEVTGPDVISPVVGSIGGRGPEFWRAIGVTPPDWGPDDRFTGSPCL 715
           P    LGAP    GP+   P +  P  G+    G   W A      + GP D    +P  
Sbjct: 36  PAELRLGAP--VGGPDPQSPGLDEPAPGAAADGGAR-WSAGPAPGLEGGPRDPGPSAPPP 92

Query: 714 LSGPELDFALADPPAPG 664
            SGP    A  D P PG
Sbjct: 93  RSGPRGQLASPDAPGPG 109

>P39769:PHP_DROME Polyhomeotic-proximal chromatin protein - Drosophila melanogaster|
            (Fruit fly)
          Length = 1589

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 14/113 (12%)
 Frame = +2

Query: 689  AKSNSGPLNKHGEPVKRSSGPQSGGVTPMARQNSXXXXXXXXXXXXITSGPVTSGPLNSS 868
            A S++G    +G+   RSS P  G  TP ++Q++                P ++ P + S
Sbjct: 1173 ASSSTGEALSNGDASDRSSTPSKGATTPTSKQSN-----------AAVQPPSSTTPNSVS 1221

Query: 869  G--APRRKVSGSLDPAASMKVRAT------------SLAHNQAVTTLTSEGGF 985
            G   P+    GSL  A S     T            S A + A TT TS G F
Sbjct: 1222 GKEEPKLATCGSLTSATSTSTTTTITNGIGVARTTASTAVSTASTTTTSSGTF 1274

>Q5AI80:VTS1_CANAL Protein VTS1 - Candida albicans (Yeast)|
          Length = 679

 Score = 27.3 bits (59), Expect(3) = 2.1
 Identities = 13/48 (27%), Positives = 28/48 (58%)
 Frame = -2

Query: 1192 AIDKPEHASPAPPNIPRHKCSSRTNHCNNNYQHNRIVNSNKNEETYCK 1049
            +I++  ++S  P ++ +   S+   + +NN   N  +NSN+N+ T+ K
Sbjct: 513  SINRSLNSSSVPASMHKSNYSNSHGNNSNNNSGNTNINSNQNKGTHKK 560



 Score = 22.7 bits (47), Expect(3) = 2.1
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -3

Query: 1053 ANPNSKSVITSQNTHFEMLPITEKPPSLVSVVTAWL 946
            AN N  +  T+ ++    +PI      L++ + AWL
Sbjct: 588  ANANVNTTATTSSSSSSSMPIEVSSLELLNNIPAWL 623



 Score = 21.2 bits (43), Expect(3) = 2.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 1281 DSRGKFPHVTTP 1246
            DS  K PHV TP
Sbjct: 467  DSNRKHPHVATP 478

>Q8R3Q0:TMM66_MOUSE Transmembrane protein 66 precursor - Mus musculus (Mouse)|
          Length = 334

 Score = 33.9 bits (76), Expect = 2.9
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
 Frame = -3

Query: 996 PITEKPPSLVSVVTAWL*ASDVARTFIDAAGSRDPDTFLLGAPDEFSGPEVTGPDVISPV 817
           P +E PP            S+ ++ F  AAG+  P     G   EF+GP+ TG    S  
Sbjct: 198 PYSEHPPY-----------SEHSQRFASAAGAPPP-----GFKSEFTGPQNTGYGASSGF 241

Query: 816 VGSIGGR-----GPEFWRAIG 769
             + GG+     GP FW  +G
Sbjct: 242 GSAFGGQGYGSSGPGFWSGLG 262

>Q9Y4F5:K0284_HUMAN Protein KIAA0284 - Homo sapiens (Human)|
          Length = 1589

 Score = 33.9 bits (76), Expect = 2.9
 Identities = 25/69 (36%), Positives = 26/69 (37%)
 Frame = -3

Query: 870 PDEFSGPEVTGPDVISPVVGSIGGRGPEFWRAIGVTPPDWGPDDRFTGSPCLLSGPELDF 691
           P    G E   PD +S   GS GGRGPE         P   P D    SP    GP    
Sbjct: 733 PSRLFGQEELDPDSLSDASGSDGGRGPE---------PGVEPQDSRRRSP--QEGPTWSR 781

Query: 690 ALADPPAPG 664
               P APG
Sbjct: 782 GRRSPRAPG 790

>Q8XJD8:EX7L_CLOPE Exodeoxyribonuclease 7 large subunit - Clostridium perfringens|
          Length = 400

 Score = 33.9 bits (76), Expect = 2.9
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
 Frame = +2

Query: 1397 TAERHAVDFYISDFQSGLRALVRTGSGARVTPYVDESVVIDVNPE---NKDMSPEFLRWL 1567
            +A  H VDF ISDF S +RA   + +G  V+P + E +   +N +   ++ +   FL   
Sbjct: 232  SAVGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLLNKKEFLHRAVDRRFLNAK 291

Query: 1568 RERNLSSDGRK----MRLKEGYIKEGSTV 1642
            R+ +L   G K      + E  IKE +T+
Sbjct: 292  RDVDLLHKGLKGNNPTHIIEKRIKEVNTL 320

>Q01835:P60_LISGR Protein p60 precursor - Listeria grayi (Listeria murrayi)|
          Length = 511

 Score = 33.1 bits (74), Expect = 4.9
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -2

Query: 1231 LSIFCSSEISIRTAIDKPEHASPAPPNIPRHKCSSRTNHCNNNYQHNRIVNSNKNEET 1058
            ++I+   E+S++ +  KP+ A+PA P + +   S+       N  +N    +N N  T
Sbjct: 331  ITIYAGQELSVKASAAKPKPAAPAKPAVSKPATSTPAKVTPTNTTNNSTPTTNVNNNT 388

>Q0SS02:EX7L_CLOPS Exodeoxyribonuclease 7 large subunit - Clostridium perfringens|
            (strain SM101 / Type A)
          Length = 400

 Score = 33.1 bits (74), Expect = 4.9
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
 Frame = +2

Query: 1397 TAERHAVDFYISDFQSGLRALVRTGSGARVTPYVDESVVIDVNPE---NKDMSPEFLRWL 1567
            +A  H VDF ISDF S +RA   + +G  V+P + E +   +N +   ++ +  +FL   
Sbjct: 232  SAVGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLLNKKEFLHRAIDRKFLNAK 291

Query: 1568 RERNLSSDGRK 1600
            R+ +L   G K
Sbjct: 292  RDVDLLYKGLK 302

>Q6CPI4:SYF2_KLULA Pre-mRNA-splicing factor SYF2 - Kluyveromyces lactis (Yeast) (Candida|
            sphaerica)
          Length = 221

 Score = 32.7 bits (73), Expect = 6.5
 Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
 Frame = +2

Query: 1331 EYRGWDSKTANPKHRRFTWG-----LRTAERHAVDFYISDFQSGLRALVRTGSGARV--T 1489
            EY  W++KT N +H +   G      + + +  VD    D    L+  +      +V   
Sbjct: 107  EYEKWEAKTQNSRHNKSVMGDFQTIAKNSYKKEVDALPKDISHPLKGGITEDGKVQVEDN 166

Query: 1490 PYVDESVVIDVNPENKDMSPEFLRWLRERNLSSDGRKMRLKEGYIKE 1630
            P + E +V D+N  +K       R++  +       K+ L +G+I +
Sbjct: 167  PELVEKMVNDLNERSKK------RYMVRKQKLDKQNKINLDDGFIND 207

>Q6ZU67:CCDC4_HUMAN Coiled-coil domain-containing protein 4 - Homo sapiens (Human)|
          Length = 530

 Score = 32.7 bits (73), Expect = 6.5
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
 Frame = -3

Query: 2097 LQTAQKQSYYTSIESS*PKKQERRRTKHIEKGLYSQTQIN----------QQPYSIFTSL 1948
            L +   QS  + ++       ER+   HI KG++SQT  N          +Q  S F  +
Sbjct: 185  LDSNHSQSMISCVKQEGSSYNERQEHCHIGKGVHSQTSDNVDIEMQYMQRKQQTSAFLRV 244

Query: 1947 NHT*HLYIFLSSNTLPIKPNPRSKDSTGHRSLFNSSYSTPQQSSACYTGITSMSEVSSHL 1768
              T  L  +L S + P  PNP S    GH +  +   ++P  +   +T   + SE   H 
Sbjct: 245  -FTDSLQNYLLSGSFP-TPNPSSASEYGHLADVDPLSTSPVHTLGGWTS-PATSESHGHP 301

Query: 1767 TTS 1759
            ++S
Sbjct: 302  SSS 304

>Q0TPD5:EX7L_CLOP1 Exodeoxyribonuclease 7 large subunit - Clostridium perfringens|
            (strain ATCC 13124 / NCTC 8237 / Type A)
          Length = 400

 Score = 32.3 bits (72), Expect = 8.4
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 1397 TAERHAVDFYISDFQSGLRALVRTGSGARVTPYVDESV 1510
            +A  H VDF ISDF S +RA   + +G  V+P + E +
Sbjct: 232  SAVGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMI 269


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 402,562,730
Number of extensions: 9346598
Number of successful extensions: 28990
Number of sequences better than 10.0: 12
Number of HSP's gapped: 28781
Number of HSP's successfully gapped: 14
Length of query: 734
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 613
Effective length of database: 67,496,744
Effective search space: 41375504072
Effective search space used: 41375504072
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)