ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf44h24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 587 bits (296), Expect = e-164 Identities = 339/352 (96%), Gaps = 1/352 (0%) Strand = Plus / Plus Query: 1838 tagctgctgttgaagagggaacgatggcctgtcgaatcttttgacctcgggttgggtttg 1897 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1153 tagctgctgttgaagagtgaacgttggcctgtcgaatcttttgacctcgggttgggcttg 1212 Query: 1898 attggtagagtattagaactgagaaaaatgtacaaatgttaggtgtgattaaggctagta 1957 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1213 attggtagagtattagaactgagaaaaatgtacaaatgctaggtgtgattaaggctagta 1272 Query: 1958 aagatggagtatggctgctggttaatctgtgtttggctgtatagtcctttttcaatgtgt 2017 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1273 aagatggagtatggctgctgggtaatctgtgtttggctgtatagtcctttttcaatgtgt 1332 Query: 2018 tttgtcctccttcgctcctgttttttcggttatgagctctcaatacttgtgtaatatgat 2077 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 tttgttctccttcgctcctgttttttcggttatgagctctcaatacttgtgtaatatgat 1392 Query: 2078 tgcttttgggctgtttgaagacttgttgaatcgggtttatgtgttatttaggatgaactt 2137 |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| || Sbjct: 1393 tgcttttgggctgtttgaagacatgttgaatcgagtttatgtgttatttaggatgaattt 1452 Query: 2138 cttgcaccgctgttaaagccttaaatgtattgttgctgttacttttatgtat 2189 ||||||| |||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 1453 cttgcactgctgttaaagcc-taaatatattgctgctgttacttttatgtat 1503 Score = 71.9 bits (36), Expect = 9e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1715 ggttgccagtggggtacttgtttcttcccagcgaacctcgatggactggttgtgag 1770 |||||||||||||| | |||||||||||||||||| || ||||||||||| ||||| Sbjct: 1097 ggttgccagtggggaagttgtttcttcccagcgaaacttgatggactggtcgtgag 1152 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2080 cttttgggctgtttgaagact 2100 ||||||||||||||||||||| Sbjct: 1535 cttttgggctgtttgaagact 1555
>gb|AY596559.1| Saccharum officinarum clone SCVPLB1018C01, complete sequence Length = 2065 Score = 571 bits (288), Expect = e-159 Identities = 545/630 (86%), Gaps = 3/630 (0%) Strand = Plus / Plus Query: 359 atgggttctagatttccatcacatcagctgagcagtggtctttatgtatctggccgacct 418 |||||||| || ||| |||||||||||||||||| ||| || ||||| ||||| |||||| Sbjct: 348 atgggttcaaggtttgcatcacatcagctgagcaatggcctgtatgtttctggtcgacct 407 Query: 419 gagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatacactggtggt 478 ||||||||||||||||||||||| ||| || | |||| | ||||||||| ||||| ||| Sbjct: 408 gagcaacctaaggagaaggccccaaccatttgttccaccgcgatgccatatactgggggt 467 Query: 479 gacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaaagatctaga 538 |||| |||||||||||||||||| |||||||||||||| ||||||| ||| | || ||| Sbjct: 468 gacatcaagaaatctggagagctggggaagatgtttgatctccatgttgagaagtcaaga 527 Query: 539 aaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggtgctgcttcc 598 ||||||||||||||||| ||||||||||| || ||| |||||||||| |||||||||||| Sbjct: 528 aaatctggtcctctaggaaatgctccttcaaggaatacttcatttggaggtgctgcttcc 587 Query: 599 aactctggacctgtctctaatgctggcggtcggtcaaactactcgggttctctttcatct 658 ||||||||||| ||||| |||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 588 aactctggacccgtctccaatgctggtggtcggtccaactactctggttctctttcatct 647 Query: 659 tcagttcctggtgctggaggatcagcaagagcaaaatctaactccggaccactcaataag 718 ||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 648 tcagttcctggtgctggcggatcagccagagcaaaatcaaactccggaccgctcaataag 707 Query: 719 catggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgaccccaatggct 778 |||||||| ||| |||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 708 catggagagccaacaaagaggtcatctggtccccagtctggaggagtgaccccaatggca 767 Query: 779 cgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatcacatctggc 838 |||||||| || || || ||||| || ||||||| || || ||||||||||||||||| Sbjct: 768 cgccagaactctggcccgcttccacctgtgcttccgacaactgggcttatcacatctggg 827 Query: 839 cctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagtatctggatct 898 ||| | |||| || ||||| |||||||||||||| || ||| ||||||||||| | Sbjct: 828 cctatctcttcagggccacttaattcgtctggtgctcc---aaggaaagtatctgggcca 884 Query: 899 cttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggctgtt 958 |||||| |||||||||||||||| ||||||| || || |||||||||| || |||||| Sbjct: 885 cttgattctgctgcatcgatgaaaatgcgggctacttcctttgctcacaatcaagctgtt 944 Query: 959 actacactcaccagtgaaggtggtttctca 988 |||| |||| || ||||| ||||| |||| Sbjct: 945 actaatctcaacactgaagatggttactca 974 Score = 446 bits (225), Expect = e-121 Identities = 546/653 (83%) Strand = Plus / Plus Query: 1075 tgctgttcacaatgcgattgtgctgatagttgttgttgcaatgattggttctgctgctgc 1134 ||||||||||||||| ||| |||||||||||||||| | || |||||| || |||||| Sbjct: 1061 tgctgttcacaatgcaattttgctgatagttgttgtggtgatatttggttttgttgctgc 1120 Query: 1135 acttgtgtcttggaatgtttggcggggcaggagaggcgtgctcaggtttgtcaatagctg 1194 |||| | ||||||| ||| |||| |||||||||| | ||||||| ||| ||| Sbjct: 1121 acttcttatctggaatgcttgctggggtaggagaggcgcaattgggtttgttaatcgcta 1180 Query: 1195 tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggttgt 1254 ||||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||| || Sbjct: 1181 tcctgatgctgatctcagaactgccaaagatggacagtatgtaaaggttacaggggtggt 1240 Query: 1255 tacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgtgtacac 1314 ||| ||||||||||||||||| || ||||| || |||||| | || ||||| || ||||| Sbjct: 1241 tacttgtggaaatttccccctcgaatcctcgttccaaagggtcccaagatgcgtatacac 1300 Query: 1315 ttcaactaggctgtatgagtataggggctgggattcaaaaactgcaaaccccaagcatcg 1374 ||| ||||| |||||||||| ||||| |||||||| ||| |||| || | ||||||| Sbjct: 1301 ttctactagcttgtatgagtacaggggttgggattccaaagctgccaatacggagcatcg 1360 Query: 1375 ccggtttacctggggattacgcacagcagagcggcatgcggtcgatttctacatttcaga 1434 || ||||||||||| |||||| || ||||| |||||||| ||||||||||| ||||| Sbjct: 1361 gcgttttacctggggtttacgctcaatggagcgacatgcggttgatttctacatctcaga 1420 Query: 1435 ctttcagtctgggcttcgagcattggtgagaaccggaagcggtgcacgggtgacaccata 1494 |||||||||||||||||||||||||||| ||| ||| |||||||| ||||| || || Sbjct: 1421 ttttcagtctgggcttcgagcattggtgaaaacaggatatggtgcacgtgtgacccctta 1480 Query: 1495 tgtcgatgaatccgtagtaattgatgtcaatcctgagaacaaggacatgtctcctgaatt 1554 ||||||||||| || ||||||| ||||||| || |||||||| ||||| |||||||| Sbjct: 1481 cgtcgatgaatctgttataattgacatcaatccagacaacaaggatatgtcccctgaatt 1540 Query: 1555 tttaagatggctacgagaaaggaacctctcaagtgatggtcggaaaatgcgcctaaaaga 1614 ||| ||||||||| | || || ||||| ||||| |||| ||||| ||||||||||||||| Sbjct: 1541 tttgagatggctaagggagagaaacctttcaagcgatgatcggacaatgcgcctaaaaga 1600 Query: 1615 aggatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttcaaaagaatgagag 1674 |||||||||||||||||| |||||||||||||||||||| ||||| |||| ||| || | Sbjct: 1601 aggatacatcaaggaaggtagcactgtgagtgtgatgggggttgtccaaaggaacgacaa 1660 Query: 1675 cgtgttgatgatagtacccccatcagagcccatctcatctggttgccagtggg 1727 || ||||||| || || ||||| |||||||||||| ||||||| ||||||| Sbjct: 1661 tgttctgatgattgttcctccatcggagcccatctcaactggttgtcagtggg 1713 Score = 48.1 bits (24), Expect = 0.14 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1917 tgagaaaaatgtacaaatgttaggtgtgatta 1948 |||||||||||| |||||||| |||||||||| Sbjct: 1873 tgagaaaaatgtgcaaatgttgggtgtgatta 1904
>emb|CR855143.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0113I13, complete sequence Length = 138656 Score = 555 bits (280), Expect = e-154 Identities = 537/622 (86%), Gaps = 3/622 (0%) Strand = Plus / Minus Query: 350 ttcaaaaacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatct 409 ||||||||||||||||| || |||||||| |||||||| |||| ||| || ||||| ||| Sbjct: 33922 ttcaaaaacatgggttcgaggtttccatcgcatcagcttagcaatggcctgtatgtgtct 33863 Query: 410 ggccgacctgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatac 469 ||||||||||||||||| |||||||||||||| ||| || | |||| || ||||||||| Sbjct: 33862 ggccgacctgagcaaccgaaggagaaggccccaaccatttgttccactgccatgccatac 33803 Query: 470 actggtggtgacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaa 529 ||||||||||| | || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 33802 actggtggtgatataaaaaaatctggagagcttgggaagatgtttgagctccacgctgtc 33743 Query: 530 agatctagaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggt 589 | || |||||||||||||| || ||||||| |||||||| ||| | |||||||| ||| Sbjct: 33742 aagtcaagaaaatctggtccactgagcaatgcaccttcgaggaatgcgtcatttggaggt 33683 Query: 590 gctgcttccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttct 649 ||||| || ||||||||||||||| ||||||| || | |||||| |||||||| |||||| Sbjct: 33682 gctgcatcaaactctggacctgtccctaatgccggggatcggtccaactactctggttct 33623 Query: 650 ctttcatcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggacca 709 || ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| Sbjct: 33622 ctatcatcttcagttcctggtgctagtggatcagcaagagcaaaatctagctccggacct 33563 Query: 710 ctcaataagcatggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgacc 769 ||||||||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||| Sbjct: 33562 ctcaataagcatggagaaccagtaaagagatcatcaggtcctcagtctggaggagtgacc 33503 Query: 770 ccaatggctcgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatc 829 |||||||| || |||||||| || ||||| ||||| ||||||||||| || || |||||| Sbjct: 33502 ccaatggcgcggcagaattctggccctctccctcctatgcttcctacaactggacttatc 33443 Query: 830 acatctggccctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagta 889 |||||||| ||| | || || || |||||||||||||||||||| | ||| |||||| Sbjct: 33442 acatctgggcctatcacatcggggccactgaattcgtctggtgctc---aaaggaaagta 33386 Query: 890 tctggatctcttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaac 949 |||||| |||||||| |||||||||| | |||| |||||||||||| || |||| ||| Sbjct: 33385 tctggacctcttgattctgctgcatccaagaagacgcgggccacatccttttctcataac 33326 Query: 950 caggctgttactacactcacca 971 ||||||||||||| | |||||| Sbjct: 33325 caggctgttactaaaatcacca 33304 Score = 133 bits (67), Expect = 3e-27 Identities = 100/111 (90%) Strand = Plus / Minus Query: 1617 gatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttcaaaagaatgagagcg 1676 ||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| | || Sbjct: 32146 gatacattaaggaaggcagcaccgtgagtgtgatgggggttgttcaaaagaatgacaacg 32087 Query: 1677 tgttgatgatagtacccccatcagagcccatctcatctggttgccagtggg 1727 |||||||||| || || ||| ||||||||||||| ||||||||||||||| Sbjct: 32086 tgttgatgattgttcctccaccagagcccatctctactggttgccagtggg 32036 Score = 133 bits (67), Expect = 3e-27 Identities = 127/147 (86%) Strand = Plus / Minus Query: 1249 ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 1308 ||||||||| |||||||||||||| || |||||||| | ||||||| |||| |||||||| Sbjct: 32806 ggttgttacttgtggaaatttccctctcgagtcctcgtatcaaagggttccaagatgtgt 32747 Query: 1309 gtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgcaaaccccaa 1368 |||||||||||||| | |||| |||||||| ||||| |||||| |||| ||| || | Sbjct: 32746 gtacacttcaactaccttacatgaatataggggttgggactcaaaagctgccaacaccca 32687 Query: 1369 gcatcgccggtttacctggggattacg 1395 ||||| ||||||||||||||||||||| Sbjct: 32686 gcatcaccggtttacctggggattacg 32660 Score = 119 bits (60), Expect = 4e-23 Identities = 165/200 (82%) Strand = Plus / Minus Query: 1418 gatttctacatttcagactttcagtctgggcttcgagcattggtgagaaccggaagcggt 1477 ||||||||||| ||||| ||||| |||||||| || |||||||||| | | ||| ||| Sbjct: 32460 gatttctacatctcagattttcaatctgggctccgggcattggtgaaagcaggatatggt 32401 Query: 1478 gcacgggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcctgagaacaag 1537 || || ||||| |||| || |||||||| || | ||||| | ||||||| ||||| Sbjct: 32400 gctcgagtgaccccattcgtggatgaatctgtcattattgacattgatcctgacaacaaa 32341 Query: 1538 gacatgtctcctgaatttttaagatggctacgagaaaggaacctctcaagtgatggtcgg 1597 |||||||| ||||||||| ||||||||| || |||||||| ||||||||||||| |||| Sbjct: 32340 gacatgtcccctgaatttcgaagatggctgcgggaaaggaatctctcaagtgatgatcgg 32281 Query: 1598 aaaatgcgcctaaaagaagg 1617 | |||||||||||||||||| Sbjct: 32280 ataatgcgcctaaaagaagg 32261 Score = 83.8 bits (42), Expect = 2e-12 Identities = 153/190 (80%) Strand = Plus / Minus Query: 1062 tcttcattcttattgctgttcacaatgcgattgtgctgatagttgttgttgcaatgattg 1121 |||| ||||||| ||||||||||||||| ||| | |||||||||||| | | || ||| Sbjct: 33213 tcttgattcttagtgctgttcacaatgcaattcttctgatagttgttctggtgctgtttg 33154 Query: 1122 gttctgctgctgcacttgtgtcttggaatgtttggcggggcaggagaggcgtgctcaggt 1181 ||| || |||||||||| | |||||||| ||| ||| |||||||| ||| | ||| Sbjct: 33153 gttttgttgctgcacttttcatttggaatgcttgctgggcaaggagaggtgtgattgggt 33094 Query: 1182 ttgtcaatagctgtcctgatactgatctcagaactgcaaaagatggagagtatgtgaagg 1241 |||| || ||| | ||||| ||||||| |||||||| ||||||||| ||||| | |||| Sbjct: 33093 ttgtggatcgctattctgatgctgatctaagaactgctaaagatggacagtatatcaagg 33034 Query: 1242 ttacaggggt 1251 |||||||||| Sbjct: 33033 ttacaggggt 33024 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Minus Query: 225 tcaggagctgattcaaggtgtaggttgtactatgagaaggacagctgtgcacgtcaagac 284 ||||| |||||| |||| | |||||||| |||||||||||| |||||||||| ||||||| Sbjct: 34050 tcaggtgctgatgcaagatataggttgttctatgagaaggatagctgtgcacatcaagac 33991 Query: 285 tcaaat 290 ||||| Sbjct: 33990 ccaaat 33985 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1910 ttagaactgagaaaaatgtacaaatgttaggtgtgattaaggctagtaaa 1959 |||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 31868 ttagaattgagaaaaatgtacaaatgttggggatgattaaggttagtaaa 31819
>ref|NM_001060336.1| Oryza sativa (japonica cultivar-group) Os04g0606500 (Os04g0606500) mRNA, complete cds Length = 2228 Score = 555 bits (280), Expect = e-154 Identities = 537/622 (86%), Gaps = 3/622 (0%) Strand = Plus / Plus Query: 350 ttcaaaaacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatct 409 ||||||||||||||||| || |||||||| |||||||| |||| ||| || ||||| ||| Sbjct: 425 ttcaaaaacatgggttcgaggtttccatcgcatcagcttagcaatggcctgtatgtgtct 484 Query: 410 ggccgacctgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatac 469 ||||||||||||||||| |||||||||||||| ||| || | |||| || ||||||||| Sbjct: 485 ggccgacctgagcaaccgaaggagaaggccccaaccatttgttccactgccatgccatac 544 Query: 470 actggtggtgacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaa 529 ||||||||||| | || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 545 actggtggtgatataaaaaaatctggagagcttgggaagatgtttgagctccacgctgtc 604 Query: 530 agatctagaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggt 589 | || |||||||||||||| || ||||||| |||||||| ||| | |||||||| ||| Sbjct: 605 aagtcaagaaaatctggtccactgagcaatgcaccttcgaggaatgcgtcatttggaggt 664 Query: 590 gctgcttccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttct 649 ||||| || ||||||||||||||| ||||||| || | |||||| |||||||| |||||| Sbjct: 665 gctgcatcaaactctggacctgtccctaatgccggggatcggtccaactactctggttct 724 Query: 650 ctttcatcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggacca 709 || ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| Sbjct: 725 ctatcatcttcagttcctggtgctagtggatcagcaagagcaaaatctagctccggacct 784 Query: 710 ctcaataagcatggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgacc 769 ||||||||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||| Sbjct: 785 ctcaataagcatggagaaccagtaaagagatcatcaggtcctcagtctggaggagtgacc 844 Query: 770 ccaatggctcgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatc 829 |||||||| || |||||||| || ||||| ||||| ||||||||||| || || |||||| Sbjct: 845 ccaatggcgcggcagaattctggccctctccctcctatgcttcctacaactggacttatc 904 Query: 830 acatctggccctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagta 889 |||||||| ||| | || || || |||||||||||||||||||| | ||| |||||| Sbjct: 905 acatctgggcctatcacatcggggccactgaattcgtctggtgctc---aaaggaaagta 961 Query: 890 tctggatctcttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaac 949 |||||| |||||||| |||||||||| | |||| |||||||||||| || |||| ||| Sbjct: 962 tctggacctcttgattctgctgcatccaagaagacgcgggccacatccttttctcataac 1021 Query: 950 caggctgttactacactcacca 971 ||||||||||||| | |||||| Sbjct: 1022 caggctgttactaaaatcacca 1043 Score = 424 bits (214), Expect = e-115 Identities = 553/666 (83%) Strand = Plus / Plus Query: 1062 tcttcattcttattgctgttcacaatgcgattgtgctgatagttgttgttgcaatgattg 1121 |||| ||||||| ||||||||||||||| ||| | |||||||||||| | | || ||| Sbjct: 1134 tcttgattcttagtgctgttcacaatgcaattcttctgatagttgttctggtgctgtttg 1193 Query: 1122 gttctgctgctgcacttgtgtcttggaatgtttggcggggcaggagaggcgtgctcaggt 1181 ||| || |||||||||| | |||||||| ||| ||| |||||||| ||| | ||| Sbjct: 1194 gttttgttgctgcacttttcatttggaatgcttgctgggcaaggagaggtgtgattgggt 1253 Query: 1182 ttgtcaatagctgtcctgatactgatctcagaactgcaaaagatggagagtatgtgaagg 1241 |||| || ||| | ||||| ||||||| |||||||| ||||||||| ||||| | |||| Sbjct: 1254 ttgtggatcgctattctgatgctgatctaagaactgctaaagatggacagtatatcaagg 1313 Query: 1242 ttacaggggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccga 1301 |||||||||||||||| |||||||||||||| || |||||||| | ||||||| |||| | Sbjct: 1314 ttacaggggttgttacttgtggaaatttccctctcgagtcctcgtatcaaagggttccaa 1373 Query: 1302 gatgtgtgtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgcaa 1361 ||||||||||||||||||||| | |||| |||||||| ||||| |||||| |||| | Sbjct: 1374 gatgtgtgtacacttcaactaccttacatgaatataggggttgggactcaaaagctgcca 1433 Query: 1362 accccaagcatcgccggtttacctggggattacgcacagcagagcggcatgcggtcgatt 1421 || || |||||| ||||||||||||||||||||| || |||| || || || |||| Sbjct: 1434 acacccagcatcaccggtttacctggggattacggtcaatggagcaacacgcagtggatt 1493 Query: 1422 tctacatttcagactttcagtctgggcttcgagcattggtgagaaccggaagcggtgcac 1481 ||||||| ||||| ||||| |||||||| || |||||||||| | | ||| ||||| | Sbjct: 1494 tctacatctcagattttcaatctgggctccgggcattggtgaaagcaggatatggtgctc 1553 Query: 1482 gggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcctgagaacaaggaca 1541 | ||||| |||| || |||||||| || | ||||| | ||||||| ||||| |||| Sbjct: 1554 gagtgaccccattcgtggatgaatctgtcattattgacattgatcctgacaacaaagaca 1613 Query: 1542 tgtctcctgaatttttaagatggctacgagaaaggaacctctcaagtgatggtcggaaaa 1601 |||| ||||||||| ||||||||| || |||||||| ||||||||||||| ||||| || Sbjct: 1614 tgtcccctgaatttcgaagatggctgcgggaaaggaatctctcaagtgatgatcggataa 1673 Query: 1602 tgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttc 1661 |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 1674 tgcgcctaaaagaaggatacattaaggaaggcagcaccgtgagtgtgatgggggttgttc 1733 Query: 1662 aaaagaatgagagcgtgttgatgatagtacccccatcagagcccatctcatctggttgcc 1721 |||||||||| | |||||||||||| || || ||| ||||||||||||| ||||||||| Sbjct: 1734 aaaagaatgacaacgtgttgatgattgttcctccaccagagcccatctctactggttgcc 1793 Query: 1722 agtggg 1727 |||||| Sbjct: 1794 agtggg 1799 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Plus Query: 225 tcaggagctgattcaaggtgtaggttgtactatgagaaggacagctgtgcacgtcaagac 284 ||||| |||||| |||| | |||||||| |||||||||||| |||||||||| ||||||| Sbjct: 297 tcaggtgctgatgcaagatataggttgttctatgagaaggatagctgtgcacatcaagac 356 Query: 285 tcaaat 290 ||||| Sbjct: 357 ccaaat 362 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1910 ttagaactgagaaaaatgtacaaatgttaggtgtgattaaggctagtaaa 1959 |||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 1967 ttagaattgagaaaaatgtacaaatgttggggatgattaaggttagtaaa 2016
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 555 bits (280), Expect = e-154 Identities = 537/622 (86%), Gaps = 3/622 (0%) Strand = Plus / Minus Query: 350 ttcaaaaacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatct 409 ||||||||||||||||| || |||||||| |||||||| |||| ||| || ||||| ||| Sbjct: 30678452 ttcaaaaacatgggttcgaggtttccatcgcatcagcttagcaatggcctgtatgtgtct 30678393 Query: 410 ggccgacctgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatac 469 ||||||||||||||||| |||||||||||||| ||| || | |||| || ||||||||| Sbjct: 30678392 ggccgacctgagcaaccgaaggagaaggccccaaccatttgttccactgccatgccatac 30678333 Query: 470 actggtggtgacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaa 529 ||||||||||| | || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 30678332 actggtggtgatataaaaaaatctggagagcttgggaagatgtttgagctccacgctgtc 30678273 Query: 530 agatctagaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggt 589 | || |||||||||||||| || ||||||| |||||||| ||| | |||||||| ||| Sbjct: 30678272 aagtcaagaaaatctggtccactgagcaatgcaccttcgaggaatgcgtcatttggaggt 30678213 Query: 590 gctgcttccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttct 649 ||||| || ||||||||||||||| ||||||| || | |||||| |||||||| |||||| Sbjct: 30678212 gctgcatcaaactctggacctgtccctaatgccggggatcggtccaactactctggttct 30678153 Query: 650 ctttcatcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggacca 709 || ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| Sbjct: 30678152 ctatcatcttcagttcctggtgctagtggatcagcaagagcaaaatctagctccggacct 30678093 Query: 710 ctcaataagcatggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgacc 769 ||||||||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||| Sbjct: 30678092 ctcaataagcatggagaaccagtaaagagatcatcaggtcctcagtctggaggagtgacc 30678033 Query: 770 ccaatggctcgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatc 829 |||||||| || |||||||| || ||||| ||||| ||||||||||| || || |||||| Sbjct: 30678032 ccaatggcgcggcagaattctggccctctccctcctatgcttcctacaactggacttatc 30677973 Query: 830 acatctggccctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagta 889 |||||||| ||| | || || || |||||||||||||||||||| | ||| |||||| Sbjct: 30677972 acatctgggcctatcacatcggggccactgaattcgtctggtgctc---aaaggaaagta 30677916 Query: 890 tctggatctcttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaac 949 |||||| |||||||| |||||||||| | |||| |||||||||||| || |||| ||| Sbjct: 30677915 tctggacctcttgattctgctgcatccaagaagacgcgggccacatccttttctcataac 30677856 Query: 950 caggctgttactacactcacca 971 ||||||||||||| | |||||| Sbjct: 30677855 caggctgttactaaaatcacca 30677834 Score = 133 bits (67), Expect = 3e-27 Identities = 100/111 (90%) Strand = Plus / Minus Query: 1617 gatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttcaaaagaatgagagcg 1676 ||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| | || Sbjct: 30676676 gatacattaaggaaggcagcaccgtgagtgtgatgggggttgttcaaaagaatgacaacg 30676617 Query: 1677 tgttgatgatagtacccccatcagagcccatctcatctggttgccagtggg 1727 |||||||||| || || ||| ||||||||||||| ||||||||||||||| Sbjct: 30676616 tgttgatgattgttcctccaccagagcccatctctactggttgccagtggg 30676566 Score = 133 bits (67), Expect = 3e-27 Identities = 127/147 (86%) Strand = Plus / Minus Query: 1249 ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 1308 ||||||||| |||||||||||||| || |||||||| | ||||||| |||| |||||||| Sbjct: 30677336 ggttgttacttgtggaaatttccctctcgagtcctcgtatcaaagggttccaagatgtgt 30677277 Query: 1309 gtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgcaaaccccaa 1368 |||||||||||||| | |||| |||||||| ||||| |||||| |||| ||| || | Sbjct: 30677276 gtacacttcaactaccttacatgaatataggggttgggactcaaaagctgccaacaccca 30677217 Query: 1369 gcatcgccggtttacctggggattacg 1395 ||||| ||||||||||||||||||||| Sbjct: 30677216 gcatcaccggtttacctggggattacg 30677190 Score = 119 bits (60), Expect = 4e-23 Identities = 165/200 (82%) Strand = Plus / Minus Query: 1418 gatttctacatttcagactttcagtctgggcttcgagcattggtgagaaccggaagcggt 1477 ||||||||||| ||||| ||||| |||||||| || |||||||||| | | ||| ||| Sbjct: 30676990 gatttctacatctcagattttcaatctgggctccgggcattggtgaaagcaggatatggt 30676931 Query: 1478 gcacgggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcctgagaacaag 1537 || || ||||| |||| || |||||||| || | ||||| | ||||||| ||||| Sbjct: 30676930 gctcgagtgaccccattcgtggatgaatctgtcattattgacattgatcctgacaacaaa 30676871 Query: 1538 gacatgtctcctgaatttttaagatggctacgagaaaggaacctctcaagtgatggtcgg 1597 |||||||| ||||||||| ||||||||| || |||||||| ||||||||||||| |||| Sbjct: 30676870 gacatgtcccctgaatttcgaagatggctgcgggaaaggaatctctcaagtgatgatcgg 30676811 Query: 1598 aaaatgcgcctaaaagaagg 1617 | |||||||||||||||||| Sbjct: 30676810 ataatgcgcctaaaagaagg 30676791 Score = 83.8 bits (42), Expect = 2e-12 Identities = 153/190 (80%) Strand = Plus / Minus Query: 1062 tcttcattcttattgctgttcacaatgcgattgtgctgatagttgttgttgcaatgattg 1121 |||| ||||||| ||||||||||||||| ||| | |||||||||||| | | || ||| Sbjct: 30677743 tcttgattcttagtgctgttcacaatgcaattcttctgatagttgttctggtgctgtttg 30677684 Query: 1122 gttctgctgctgcacttgtgtcttggaatgtttggcggggcaggagaggcgtgctcaggt 1181 ||| || |||||||||| | |||||||| ||| ||| |||||||| ||| | ||| Sbjct: 30677683 gttttgttgctgcacttttcatttggaatgcttgctgggcaaggagaggtgtgattgggt 30677624 Query: 1182 ttgtcaatagctgtcctgatactgatctcagaactgcaaaagatggagagtatgtgaagg 1241 |||| || ||| | ||||| ||||||| |||||||| ||||||||| ||||| | |||| Sbjct: 30677623 ttgtggatcgctattctgatgctgatctaagaactgctaaagatggacagtatatcaagg 30677564 Query: 1242 ttacaggggt 1251 |||||||||| Sbjct: 30677563 ttacaggggt 30677554 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Minus Query: 225 tcaggagctgattcaaggtgtaggttgtactatgagaaggacagctgtgcacgtcaagac 284 ||||| |||||| |||| | |||||||| |||||||||||| |||||||||| ||||||| Sbjct: 30678580 tcaggtgctgatgcaagatataggttgttctatgagaaggatagctgtgcacatcaagac 30678521 Query: 285 tcaaat 290 ||||| Sbjct: 30678520 ccaaat 30678515 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1910 ttagaactgagaaaaatgtacaaatgttaggtgtgattaaggctagtaaa 1959 |||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 30676398 ttagaattgagaaaaatgtacaaatgttggggatgattaaggttagtaaa 30676349
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 555 bits (280), Expect = e-154 Identities = 537/622 (86%), Gaps = 3/622 (0%) Strand = Plus / Minus Query: 350 ttcaaaaacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatct 409 ||||||||||||||||| || |||||||| |||||||| |||| ||| || ||||| ||| Sbjct: 82183 ttcaaaaacatgggttcgaggtttccatcgcatcagcttagcaatggcctgtatgtgtct 82124 Query: 410 ggccgacctgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatac 469 ||||||||||||||||| |||||||||||||| ||| || | |||| || ||||||||| Sbjct: 82123 ggccgacctgagcaaccgaaggagaaggccccaaccatttgttccactgccatgccatac 82064 Query: 470 actggtggtgacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaa 529 ||||||||||| | || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 82063 actggtggtgatataaaaaaatctggagagcttgggaagatgtttgagctccacgctgtc 82004 Query: 530 agatctagaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggt 589 | || |||||||||||||| || ||||||| |||||||| ||| | |||||||| ||| Sbjct: 82003 aagtcaagaaaatctggtccactgagcaatgcaccttcgaggaatgcgtcatttggaggt 81944 Query: 590 gctgcttccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttct 649 ||||| || ||||||||||||||| ||||||| || | |||||| |||||||| |||||| Sbjct: 81943 gctgcatcaaactctggacctgtccctaatgccggggatcggtccaactactctggttct 81884 Query: 650 ctttcatcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggacca 709 || ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| Sbjct: 81883 ctatcatcttcagttcctggtgctagtggatcagcaagagcaaaatctagctccggacct 81824 Query: 710 ctcaataagcatggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgacc 769 ||||||||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||| Sbjct: 81823 ctcaataagcatggagaaccagtaaagagatcatcaggtcctcagtctggaggagtgacc 81764 Query: 770 ccaatggctcgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatc 829 |||||||| || |||||||| || ||||| ||||| ||||||||||| || || |||||| Sbjct: 81763 ccaatggcgcggcagaattctggccctctccctcctatgcttcctacaactggacttatc 81704 Query: 830 acatctggccctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagta 889 |||||||| ||| | || || || |||||||||||||||||||| | ||| |||||| Sbjct: 81703 acatctgggcctatcacatcggggccactgaattcgtctggtgctc---aaaggaaagta 81647 Query: 890 tctggatctcttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaac 949 |||||| |||||||| |||||||||| | |||| |||||||||||| || |||| ||| Sbjct: 81646 tctggacctcttgattctgctgcatccaagaagacgcgggccacatccttttctcataac 81587 Query: 950 caggctgttactacactcacca 971 ||||||||||||| | |||||| Sbjct: 81586 caggctgttactaaaatcacca 81565 Score = 133 bits (67), Expect = 3e-27 Identities = 100/111 (90%) Strand = Plus / Minus Query: 1617 gatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttcaaaagaatgagagcg 1676 ||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| | || Sbjct: 80407 gatacattaaggaaggcagcaccgtgagtgtgatgggggttgttcaaaagaatgacaacg 80348 Query: 1677 tgttgatgatagtacccccatcagagcccatctcatctggttgccagtggg 1727 |||||||||| || || ||| ||||||||||||| ||||||||||||||| Sbjct: 80347 tgttgatgattgttcctccaccagagcccatctctactggttgccagtggg 80297 Score = 133 bits (67), Expect = 3e-27 Identities = 127/147 (86%) Strand = Plus / Minus Query: 1249 ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 1308 ||||||||| |||||||||||||| || |||||||| | ||||||| |||| |||||||| Sbjct: 81067 ggttgttacttgtggaaatttccctctcgagtcctcgtatcaaagggttccaagatgtgt 81008 Query: 1309 gtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgcaaaccccaa 1368 |||||||||||||| | |||| |||||||| ||||| |||||| |||| ||| || | Sbjct: 81007 gtacacttcaactaccttacatgaatataggggttgggactcaaaagctgccaacaccca 80948 Query: 1369 gcatcgccggtttacctggggattacg 1395 ||||| ||||||||||||||||||||| Sbjct: 80947 gcatcaccggtttacctggggattacg 80921 Score = 119 bits (60), Expect = 4e-23 Identities = 165/200 (82%) Strand = Plus / Minus Query: 1418 gatttctacatttcagactttcagtctgggcttcgagcattggtgagaaccggaagcggt 1477 ||||||||||| ||||| ||||| |||||||| || |||||||||| | | ||| ||| Sbjct: 80721 gatttctacatctcagattttcaatctgggctccgggcattggtgaaagcaggatatggt 80662 Query: 1478 gcacgggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcctgagaacaag 1537 || || ||||| |||| || |||||||| || | ||||| | ||||||| ||||| Sbjct: 80661 gctcgagtgaccccattcgtggatgaatctgtcattattgacattgatcctgacaacaaa 80602 Query: 1538 gacatgtctcctgaatttttaagatggctacgagaaaggaacctctcaagtgatggtcgg 1597 |||||||| ||||||||| ||||||||| || |||||||| ||||||||||||| |||| Sbjct: 80601 gacatgtcccctgaatttcgaagatggctgcgggaaaggaatctctcaagtgatgatcgg 80542 Query: 1598 aaaatgcgcctaaaagaagg 1617 | |||||||||||||||||| Sbjct: 80541 ataatgcgcctaaaagaagg 80522 Score = 83.8 bits (42), Expect = 2e-12 Identities = 153/190 (80%) Strand = Plus / Minus Query: 1062 tcttcattcttattgctgttcacaatgcgattgtgctgatagttgttgttgcaatgattg 1121 |||| ||||||| ||||||||||||||| ||| | |||||||||||| | | || ||| Sbjct: 81474 tcttgattcttagtgctgttcacaatgcaattcttctgatagttgttctggtgctgtttg 81415 Query: 1122 gttctgctgctgcacttgtgtcttggaatgtttggcggggcaggagaggcgtgctcaggt 1181 ||| || |||||||||| | |||||||| ||| ||| |||||||| ||| | ||| Sbjct: 81414 gttttgttgctgcacttttcatttggaatgcttgctgggcaaggagaggtgtgattgggt 81355 Query: 1182 ttgtcaatagctgtcctgatactgatctcagaactgcaaaagatggagagtatgtgaagg 1241 |||| || ||| | ||||| ||||||| |||||||| ||||||||| ||||| | |||| Sbjct: 81354 ttgtggatcgctattctgatgctgatctaagaactgctaaagatggacagtatatcaagg 81295 Query: 1242 ttacaggggt 1251 |||||||||| Sbjct: 81294 ttacaggggt 81285 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Minus Query: 225 tcaggagctgattcaaggtgtaggttgtactatgagaaggacagctgtgcacgtcaagac 284 ||||| |||||| |||| | |||||||| |||||||||||| |||||||||| ||||||| Sbjct: 82311 tcaggtgctgatgcaagatataggttgttctatgagaaggatagctgtgcacatcaagac 82252 Query: 285 tcaaat 290 ||||| Sbjct: 82251 ccaaat 82246 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1910 ttagaactgagaaaaatgtacaaatgttaggtgtgattaaggctagtaaa 1959 |||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 80129 ttagaattgagaaaaatgtacaaatgttggggatgattaaggttagtaaa 80080
>dbj|AK068251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145H18, full insert sequence Length = 2228 Score = 555 bits (280), Expect = e-154 Identities = 537/622 (86%), Gaps = 3/622 (0%) Strand = Plus / Plus Query: 350 ttcaaaaacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatct 409 ||||||||||||||||| || |||||||| |||||||| |||| ||| || ||||| ||| Sbjct: 425 ttcaaaaacatgggttcgaggtttccatcgcatcagcttagcaatggcctgtatgtgtct 484 Query: 410 ggccgacctgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatac 469 ||||||||||||||||| |||||||||||||| ||| || | |||| || ||||||||| Sbjct: 485 ggccgacctgagcaaccgaaggagaaggccccaaccatttgttccactgccatgccatac 544 Query: 470 actggtggtgacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaa 529 ||||||||||| | || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 545 actggtggtgatataaaaaaatctggagagcttgggaagatgtttgagctccacgctgtc 604 Query: 530 agatctagaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggt 589 | || |||||||||||||| || ||||||| |||||||| ||| | |||||||| ||| Sbjct: 605 aagtcaagaaaatctggtccactgagcaatgcaccttcgaggaatgcgtcatttggaggt 664 Query: 590 gctgcttccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttct 649 ||||| || ||||||||||||||| ||||||| || | |||||| |||||||| |||||| Sbjct: 665 gctgcatcaaactctggacctgtccctaatgccggggatcggtccaactactctggttct 724 Query: 650 ctttcatcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggacca 709 || ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| Sbjct: 725 ctatcatcttcagttcctggtgctagtggatcagcaagagcaaaatctagctccggacct 784 Query: 710 ctcaataagcatggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgacc 769 ||||||||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||| Sbjct: 785 ctcaataagcatggagaaccagtaaagagatcatcaggtcctcagtctggaggagtgacc 844 Query: 770 ccaatggctcgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatc 829 |||||||| || |||||||| || ||||| ||||| ||||||||||| || || |||||| Sbjct: 845 ccaatggcgcggcagaattctggccctctccctcctatgcttcctacaactggacttatc 904 Query: 830 acatctggccctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagta 889 |||||||| ||| | || || || |||||||||||||||||||| | ||| |||||| Sbjct: 905 acatctgggcctatcacatcggggccactgaattcgtctggtgctc---aaaggaaagta 961 Query: 890 tctggatctcttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaac 949 |||||| |||||||| |||||||||| | |||| |||||||||||| || |||| ||| Sbjct: 962 tctggacctcttgattctgctgcatccaagaagacgcgggccacatccttttctcataac 1021 Query: 950 caggctgttactacactcacca 971 ||||||||||||| | |||||| Sbjct: 1022 caggctgttactaaaatcacca 1043 Score = 424 bits (214), Expect = e-115 Identities = 553/666 (83%) Strand = Plus / Plus Query: 1062 tcttcattcttattgctgttcacaatgcgattgtgctgatagttgttgttgcaatgattg 1121 |||| ||||||| ||||||||||||||| ||| | |||||||||||| | | || ||| Sbjct: 1134 tcttgattcttagtgctgttcacaatgcaattcttctgatagttgttctggtgctgtttg 1193 Query: 1122 gttctgctgctgcacttgtgtcttggaatgtttggcggggcaggagaggcgtgctcaggt 1181 ||| || |||||||||| | |||||||| ||| ||| |||||||| ||| | ||| Sbjct: 1194 gttttgttgctgcacttttcatttggaatgcttgctgggcaaggagaggtgtgattgggt 1253 Query: 1182 ttgtcaatagctgtcctgatactgatctcagaactgcaaaagatggagagtatgtgaagg 1241 |||| || ||| | ||||| ||||||| |||||||| ||||||||| ||||| | |||| Sbjct: 1254 ttgtggatcgctattctgatgctgatctaagaactgctaaagatggacagtatatcaagg 1313 Query: 1242 ttacaggggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccga 1301 |||||||||||||||| |||||||||||||| || |||||||| | ||||||| |||| | Sbjct: 1314 ttacaggggttgttacttgtggaaatttccctctcgagtcctcgtatcaaagggttccaa 1373 Query: 1302 gatgtgtgtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgcaa 1361 ||||||||||||||||||||| | |||| |||||||| ||||| |||||| |||| | Sbjct: 1374 gatgtgtgtacacttcaactaccttacatgaatataggggttgggactcaaaagctgcca 1433 Query: 1362 accccaagcatcgccggtttacctggggattacgcacagcagagcggcatgcggtcgatt 1421 || || |||||| ||||||||||||||||||||| || |||| || || || |||| Sbjct: 1434 acacccagcatcaccggtttacctggggattacggtcaatggagcaacacgcagtggatt 1493 Query: 1422 tctacatttcagactttcagtctgggcttcgagcattggtgagaaccggaagcggtgcac 1481 ||||||| ||||| ||||| |||||||| || |||||||||| | | ||| ||||| | Sbjct: 1494 tctacatctcagattttcaatctgggctccgggcattggtgaaagcaggatatggtgctc 1553 Query: 1482 gggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcctgagaacaaggaca 1541 | ||||| |||| || |||||||| || | ||||| | ||||||| ||||| |||| Sbjct: 1554 gagtgaccccattcgtggatgaatctgtcattattgacattgatcctgacaacaaagaca 1613 Query: 1542 tgtctcctgaatttttaagatggctacgagaaaggaacctctcaagtgatggtcggaaaa 1601 |||| ||||||||| ||||||||| || |||||||| ||||||||||||| ||||| || Sbjct: 1614 tgtcccctgaatttcgaagatggctgcgggaaaggaatctctcaagtgatgatcggataa 1673 Query: 1602 tgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttc 1661 |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 1674 tgcgcctaaaagaaggatacattaaggaaggcagcaccgtgagtgtgatgggggttgttc 1733 Query: 1662 aaaagaatgagagcgtgttgatgatagtacccccatcagagcccatctcatctggttgcc 1721 |||||||||| | |||||||||||| || || ||| ||||||||||||| ||||||||| Sbjct: 1734 aaaagaatgacaacgtgttgatgattgttcctccaccagagcccatctctactggttgcc 1793 Query: 1722 agtggg 1727 |||||| Sbjct: 1794 agtggg 1799 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Plus Query: 225 tcaggagctgattcaaggtgtaggttgtactatgagaaggacagctgtgcacgtcaagac 284 ||||| |||||| |||| | |||||||| |||||||||||| |||||||||| ||||||| Sbjct: 297 tcaggtgctgatgcaagatataggttgttctatgagaaggatagctgtgcacatcaagac 356 Query: 285 tcaaat 290 ||||| Sbjct: 357 ccaaat 362 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1910 ttagaactgagaaaaatgtacaaatgttaggtgtgattaaggctagtaaa 1959 |||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 1967 ttagaattgagaaaaatgtacaaatgttggggatgattaaggttagtaaa 2016
>gb|AY107054.1| Zea mays PCO135612 mRNA sequence Length = 1006 Score = 535 bits (270), Expect = e-148 Identities = 521/604 (86%), Gaps = 3/604 (0%) Strand = Plus / Plus Query: 359 atgggttctagatttccatcacatcagctgagcagtggtctttatgtatctggccgacct 418 |||||||| || ||| |||| ||||||||||||| ||| || ||||| ||||| |||||| Sbjct: 395 atgggttcaaggtttgcatcgcatcagctgagcaatggcctgtatgtttctggtcgacct 454 Query: 419 gagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatacactggtggt 478 || |||||||||||||||||||| ||| || | |||| || ||||||||| ||||| ||| Sbjct: 455 gaacaacctaaggagaaggccccaaccatttgttccactgcgatgccatatactgggggt 514 Query: 479 gacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaaagatctaga 538 |||| ||||||||| |||||||| |||||||||||||| ||||||| ||| | || ||| Sbjct: 515 gacatcaagaaatcaggagagctggggaagatgtttgatctccatgttgagaagtcaaga 574 Query: 539 aaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggtgctgcttcc 598 ||||||||||||||||| ||||||||||| || ||| |||||||||| |||||||||||| Sbjct: 575 aaatctggtcctctaggaaatgctccttcaaggaatacttcatttggaggtgctgcttcc 634 Query: 599 aactctggacctgtctctaatgctggcggtcggtcaaactactcgggttctctttcatct 658 ||||||||||| || || ||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 635 aactctggacccgtatccaatgctggcggtcggtccaattactctggttctctttcatct 694 Query: 659 tcagttcctggtgctggaggatcagcaagagcaaaatctaactccggaccactcaataag 718 ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||||| Sbjct: 695 tcagttcctggtgctggcggatcagccagagcaaaatcaaactctggaccgctcaataag 754 Query: 719 catggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgaccccaatggct 778 |||||||| ||| |||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 755 catggagagccaacaaagaggtcatctggtccccagtctggaggagtgaccccaatggca 814 Query: 779 cgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatcacatctggc 838 ||||||||||| || || |||||||| ||||||| || || ||||||||||||||||| Sbjct: 815 cgccagaattctggcccccttcctcctgtgcttccgacaactgggcttatcacatctggg 874 Query: 839 cctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagtatctggatct 898 ||| | |||| || ||||| ||||||||||||| || ||| ||||||||||| | Sbjct: 875 cctatctcttcagggccacttaattcgtctggtgttcc---aaggaaagtatctgggcca 931 Query: 899 cttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggctgtt 958 |||||| ||||||| |||||||| ||||||| || || |||||||||| || |||||| Sbjct: 932 cttgattctgctgcgtcgatgaaaatgcgggctacttcctttgctcacaatcaagctgtt 991 Query: 959 acta 962 |||| Sbjct: 992 acta 995
>gb|AY106118.1| Zea mays PCO078446 mRNA sequence Length = 988 Score = 436 bits (220), Expect = e-118 Identities = 526/628 (83%) Strand = Plus / Plus Query: 1179 ggtttgtcaatagctgtcctgatactgatctcagaactgcaaaagatggagagtatgtga 1238 ||||||| ||| ||| ||||||| |||||||||||||||| ||||||||| | ||||| | Sbjct: 88 ggtttgttaatcgctatcctgatgctgatctcagaactgctaaagatggacaatatgtaa 147 Query: 1239 aggttacaggggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattc 1298 ||||||||||||||||||| ||||||||||||||||| || ||||| || |||||| | | Sbjct: 148 aggttacaggggttgttacctgtggaaatttcccccttgaatcctcgttccaaagggtcc 207 Query: 1299 cgagatgtgtgtacacttcaactaggctgtatgagtataggggctgggattcaaaaactg 1358 |||||||||| |||||||| ||||| |||||||||| || || |||||||| ||| ||| Sbjct: 208 cgagatgtgtatacacttctactagcttgtatgagtacagaggttgggattccaaagctg 267 Query: 1359 caaaccccaagcatcgccggtttacctggggattacgcacagcagagcggcatgcggtcg 1418 | || | ||||||| || ||||||||||| |||||| || ||||| |||||||| | Sbjct: 268 ccaatacagagcatcggcgttttacctggggcttacgctcaatggagcgccatgcggttg 327 Query: 1419 atttctacatttcagactttcagtctgggcttcgagcattggtgagaaccggaagcggtg 1478 ||||||| || ||||| |||||||| ||||||||||||||||||| ||| ||| |||| Sbjct: 328 atttctatatctcagattttcagtccgggcttcgagcattggtgaaaacaggatatggtg 387 Query: 1479 cacgggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcctgagaacaagg 1538 |||| ||||| || |||||||||||||| || ||||||| ||||||| || ||||||| Sbjct: 388 cacgtgtgaccccgtatgtcgatgaatctgttataattgacatcaatccagacaacaagg 447 Query: 1539 acatgtctcctgaatttttaagatggctacgagaaaggaacctctcaagtgatggtcgga 1598 | ||||| ||||| ||||| ||||||||||| || || ||||| ||||| |||| ||| | Sbjct: 448 atatgtcccctgattttttgagatggctacgggagagaaacctttcaagcgatgatcgta 507 Query: 1599 aaatgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatgggtgttg 1658 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 508 caatgcgcctaaaagaaggatacatcaaggaaggtagcactgtgagtgtgatgggggttg 567 Query: 1659 ttcaaaagaatgagagcgtgttgatgatagtacccccatcagagcccatctcatctggtt 1718 | |||| |||||| | || ||||||| || || |||||||||||||||||| |||||| Sbjct: 568 tccaaaggaatgacaatgttctgatgattgttcctccatcagagcccatctcaactggtt 627 Query: 1719 gccagtggggtacttgtttcttcccagcgaacctcgatggactggttgtgagatgtgaag 1778 | ||||||| | || | ||||| | ||||| ||||| || ||| | ||||| |||| Sbjct: 628 gtcagtgggccaagtgcgttctcccaaccaaccttgatgggcttgttttaagatgcgaag 687 Query: 1779 atacttcagacatggatgtgataccagt 1806 |||||||| | || |||||||||||||| Sbjct: 688 atacttcaaatattgatgtgataccagt 715
>ref|NM_001067832.1| Oryza sativa (japonica cultivar-group) Os08g0230200 (Os08g0230200) mRNA, complete cds Length = 2079 Score = 347 bits (175), Expect = 1e-91 Identities = 498/605 (82%), Gaps = 3/605 (0%) Strand = Plus / Plus Query: 356 aacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatctggccga 415 ||||||||||| | |||||||| || || || |||| ||| |||||||| || |||||| Sbjct: 333 aacatgggttcacggtttccatcccaccaactaagcaatggcctttatgtctcgggccga 392 Query: 416 cctgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatacactggt 475 || |||||||||||||||||||| || | || | |||| | |||||||||||||| Sbjct: 393 ccagagcaacctaaggagaaggctccagtcatttgctccacagcaatgccatacactggg 452 Query: 476 ggtgacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaaagatct 535 ||||||| |||||||||||||| || ||||| |||||||| ||||||| ||||| || Sbjct: 453 ggtgacataaagaaatctggagaactagggaaaatgtttgacctccatgttgaaaagtcg 512 Query: 536 agaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggtgctgct 595 | || ||||||||| | || ||| ||||| |||||| |||||||||| ||||||| | Sbjct: 513 cggaagtctggtcctttgggtaatcaaccttcaagaaatacttcatttggtggtgctggt 572 Query: 596 tccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttctctttca 655 |||||||||||||| || ||||||||| |||||||| |||||||| |||||| ||||| Sbjct: 573 tccaactctggaccagtttctaatgctcttggtcggtccaactactctggttctatttca 632 Query: 656 tcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggaccactcaat 715 || || |||||||||||||||||||||||||| |||||||| || || ||||| |||||| Sbjct: 633 tcatctgttcctggtgctggaggatcagcaagggcaaaatcaaattctggacctctcaat 692 Query: 716 aagcatggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgaccccaatg 775 |||||||||||||||| |||| |||||||||||||||||| || || |||||||||||| Sbjct: 693 aagcatggagaaccaggaaagaagtcatctggtccccagtcaggcggagtgaccccaatg 752 Query: 776 gctcgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatcacatct 835 || || |||||||| |||||| | ||||| | |||||||| || ||||| |||||||| Sbjct: 753 gcacgtcagaattctggtcctttacctcctgttcttcctacaactgggctgatcacatca 812 Query: 836 ggccctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagtatctgga 895 || ||| | | |||||||| |||||||| |||||||| || | |||||||||| || Sbjct: 813 gggcctatctcctctggacctctgaattcatctggtgctcc---acgaaaagtatcaggc 869 Query: 896 tctcttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggct 955 ||||||||||| || ||| |||||| |||| || || || |||||||||||| ||| Sbjct: 870 cctcttgatcctagtgtatcaatgaagatgcgtgcaacttcttttgctcacaacccagct 929 Query: 956 gttac 960 ||||| Sbjct: 930 gttac 934 Score = 184 bits (93), Expect = 9e-43 Identities = 147/165 (89%) Strand = Plus / Plus Query: 1195 tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggttgt 1254 ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| |||||||| Sbjct: 1169 tcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggttgt 1228 Query: 1255 tacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgtgtacac 1314 ||| ||||||||||| || || |||||||||||||||||| | || |||||||||||||| Sbjct: 1229 tacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgtgtacac 1288 Query: 1315 ttcaactaggctgtatgagtataggggctgggattcaaaaactgc 1359 ||||||| | |||||||||| |||||||||||||| ||| |||| Sbjct: 1289 ttcaacttgcttgtatgagtacaggggctgggattcgaaagctgc 1333 Score = 180 bits (91), Expect = 1e-41 Identities = 262/319 (82%) Strand = Plus / Plus Query: 1409 catgcggtcgatttctacatttcagactttcagtctgggcttcgagcattggtgagaacc 1468 ||||| || ||||||||||| || || || || ||||| || ||||||||||| | ||| Sbjct: 1383 catgctgttgatttctacatctctgatttccaatctggactacgagcattggtcaaaaca 1442 Query: 1469 ggaagcggtgcacgggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcct 1528 ||| || |||||||| || || ||||| |||||||| || || ||||| | || || Sbjct: 1443 ggatatggagcacgggtaaccccttatgttgatgaatctgttgttattgacataaaccca 1502 Query: 1529 gagaacaaggacatgtctcctgaatttttaagatggctacgagaaaggaacctctcaagt 1588 || ||||||||||||||||| || || || |||||||| || |||||||| || |||||| Sbjct: 1503 gataacaaggacatgtctcccgagttcttgagatggctgcgtgaaaggaatctatcaagt 1562 Query: 1589 gatggtcggaaaatgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtg 1648 |||| ||||| ||||||||| |||||||||||||| ||||| |||||||| |||||||| Sbjct: 1563 gatgatcggataatgcgcctgaaagaaggatacattaaggagggcagcacggtgagtgtt 1622 Query: 1649 atgggtgttgttcaaaagaatgagagcgtgttgatgatagtacccccatcagagcccatc 1708 ||||| |||||||||| ||| || | |||||||||||| || || ||||| || |||||| Sbjct: 1623 atgggggttgttcaaaggaacgacaacgtgttgatgattgttcctccatcggaacccatc 1682 Query: 1709 tcatctggttgccagtggg 1727 || |||| |||||||||| Sbjct: 1683 tccactggctgccagtggg 1701
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 347 bits (175), Expect = 1e-91 Identities = 498/605 (82%), Gaps = 3/605 (0%) Strand = Plus / Plus Query: 356 aacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatctggccga 415 ||||||||||| | |||||||| || || || |||| ||| |||||||| || |||||| Sbjct: 7935396 aacatgggttcacggtttccatcccaccaactaagcaatggcctttatgtctcgggccga 7935455 Query: 416 cctgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatacactggt 475 || |||||||||||||||||||| || | || | |||| | |||||||||||||| Sbjct: 7935456 ccagagcaacctaaggagaaggctccagtcatttgctccacagcaatgccatacactggg 7935515 Query: 476 ggtgacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaaagatct 535 ||||||| |||||||||||||| || ||||| |||||||| ||||||| ||||| || Sbjct: 7935516 ggtgacataaagaaatctggagaactagggaaaatgtttgacctccatgttgaaaagtcg 7935575 Query: 536 agaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggtgctgct 595 | || ||||||||| | || ||| ||||| |||||| |||||||||| ||||||| | Sbjct: 7935576 cggaagtctggtcctttgggtaatcaaccttcaagaaatacttcatttggtggtgctggt 7935635 Query: 596 tccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttctctttca 655 |||||||||||||| || ||||||||| |||||||| |||||||| |||||| ||||| Sbjct: 7935636 tccaactctggaccagtttctaatgctcttggtcggtccaactactctggttctatttca 7935695 Query: 656 tcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggaccactcaat 715 || || |||||||||||||||||||||||||| |||||||| || || ||||| |||||| Sbjct: 7935696 tcatctgttcctggtgctggaggatcagcaagggcaaaatcaaattctggacctctcaat 7935755 Query: 716 aagcatggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgaccccaatg 775 |||||||||||||||| |||| |||||||||||||||||| || || |||||||||||| Sbjct: 7935756 aagcatggagaaccaggaaagaagtcatctggtccccagtcaggcggagtgaccccaatg 7935815 Query: 776 gctcgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatcacatct 835 || || |||||||| |||||| | ||||| | |||||||| || ||||| |||||||| Sbjct: 7935816 gcacgtcagaattctggtcctttacctcctgttcttcctacaactgggctgatcacatca 7935875 Query: 836 ggccctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagtatctgga 895 || ||| | | |||||||| |||||||| |||||||| || | |||||||||| || Sbjct: 7935876 gggcctatctcctctggacctctgaattcatctggtgctcc---acgaaaagtatcaggc 7935932 Query: 896 tctcttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggct 955 ||||||||||| || ||| |||||| |||| || || || |||||||||||| ||| Sbjct: 7935933 cctcttgatcctagtgtatcaatgaagatgcgtgcaacttcttttgctcacaacccagct 7935992 Query: 956 gttac 960 ||||| Sbjct: 7935993 gttac 7935997 Score = 117 bits (59), Expect = 2e-22 Identities = 98/111 (88%) Strand = Plus / Plus Query: 1249 ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 1308 ||||||||| ||||||||||| || || |||||||||||||||||| | || |||||||| Sbjct: 7936841 ggttgttacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgt 7936900 Query: 1309 gtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgc 1359 ||||||||||||| | |||||||||| |||||||||||||| ||| |||| Sbjct: 7936901 gtacacttcaacttgcttgtatgagtacaggggctgggattcgaaagctgc 7936951 Score = 97.6 bits (49), Expect = 2e-16 Identities = 169/209 (80%) Strand = Plus / Plus Query: 1409 catgcggtcgatttctacatttcagactttcagtctgggcttcgagcattggtgagaacc 1468 ||||| || ||||||||||| || || || || ||||| || ||||||||||| | ||| Sbjct: 7937127 catgctgttgatttctacatctctgatttccaatctggactacgagcattggtcaaaaca 7937186 Query: 1469 ggaagcggtgcacgggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcct 1528 ||| || |||||||| || || ||||| |||||||| || || ||||| | || || Sbjct: 7937187 ggatatggagcacgggtaaccccttatgttgatgaatctgttgttattgacataaaccca 7937246 Query: 1529 gagaacaaggacatgtctcctgaatttttaagatggctacgagaaaggaacctctcaagt 1588 || ||||||||||||||||| || || || |||||||| || |||||||| || |||||| Sbjct: 7937247 gataacaaggacatgtctcccgagttcttgagatggctgcgtgaaaggaatctatcaagt 7937306 Query: 1589 gatggtcggaaaatgcgcctaaaagaagg 1617 |||| ||||| ||||||||| |||||||| Sbjct: 7937307 gatgatcggataatgcgcctgaaagaagg 7937335 Score = 85.7 bits (43), Expect = 6e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 1617 gatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttcaaaagaatgagagcg 1676 ||||||| ||||| |||||||| |||||||| ||||| |||||||||| ||| || | || Sbjct: 7937472 gatacattaaggagggcagcacggtgagtgttatgggggttgttcaaaggaacgacaacg 7937531 Query: 1677 tgttgatgatagtacccccatcagagcccatctcatctggttgccagtggg 1727 |||||||||| || || ||||| || |||||||| |||| |||||||||| Sbjct: 7937532 tgttgatgattgttcctccatcggaacccatctccactggctgccagtggg 7937582 Score = 73.8 bits (37), Expect = 2e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 1195 tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggt 1251 ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| ||||| Sbjct: 7936232 tcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggt 7936288 Score = 65.9 bits (33), Expect = 6e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 1249 ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 1308 ||||||||| | ||||||||| ||| | |||||||||||||||||| |||| |||||| | Sbjct: 7914215 ggttgttacttatggaaattttcccgtcgagtcctcatttcaaagggttccaagatgttt 7914156 Query: 1309 gtaca 1313 ||||| Sbjct: 7914155 gtaca 7914151 Score = 44.1 bits (22), Expect = 2.1 Identities = 58/70 (82%) Strand = Plus / Minus Query: 1617 gatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttcaaaagaatgagagcg 1676 ||||||||||||| ||||||| || || | ||||| |||||||||| ||| || || | Sbjct: 7913606 gatacatcaaggagggcagcagagtttgtattatgggggttgttcaaaggaacgacagtg 7913547 Query: 1677 tgttgatgat 1686 |||||||||| Sbjct: 7913546 tgttgatgat 7913537 Score = 44.1 bits (22), Expect = 2.1 Identities = 49/58 (84%) Strand = Plus / Minus Query: 1409 catgcggtcgatttctacatttcagactttcagtctgggcttcgagcattggtgagaa 1466 ||||| ||||||||||||||||| || || || ||||| | ||||||||||| |||| Sbjct: 7913883 catgctgtcgatttctacatttctgatttccaatctggacggcgagcattggtcagaa 7913826 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1195 tcctgatactgatctcagaactgcaaaagatgga 1228 ||||||| ||||||| ||||| |||||||||||| Sbjct: 7914598 tcctgattctgatcttagaacagcaaaagatgga 7914565 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 982 tttctcagttatgggaagcat 1002 ||||||||||||||||||||| Sbjct: 8807059 tttctcagttatgggaagcat 8807039
>dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461A06 Length = 136384 Score = 347 bits (175), Expect = 1e-91 Identities = 498/605 (82%), Gaps = 3/605 (0%) Strand = Plus / Plus Query: 356 aacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatctggccga 415 ||||||||||| | |||||||| || || || |||| ||| |||||||| || |||||| Sbjct: 7566 aacatgggttcacggtttccatcccaccaactaagcaatggcctttatgtctcgggccga 7625 Query: 416 cctgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatacactggt 475 || |||||||||||||||||||| || | || | |||| | |||||||||||||| Sbjct: 7626 ccagagcaacctaaggagaaggctccagtcatttgctccacagcaatgccatacactggg 7685 Query: 476 ggtgacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaaagatct 535 ||||||| |||||||||||||| || ||||| |||||||| ||||||| ||||| || Sbjct: 7686 ggtgacataaagaaatctggagaactagggaaaatgtttgacctccatgttgaaaagtcg 7745 Query: 536 agaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggtgctgct 595 | || ||||||||| | || ||| ||||| |||||| |||||||||| ||||||| | Sbjct: 7746 cggaagtctggtcctttgggtaatcaaccttcaagaaatacttcatttggtggtgctggt 7805 Query: 596 tccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttctctttca 655 |||||||||||||| || ||||||||| |||||||| |||||||| |||||| ||||| Sbjct: 7806 tccaactctggaccagtttctaatgctcttggtcggtccaactactctggttctatttca 7865 Query: 656 tcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggaccactcaat 715 || || |||||||||||||||||||||||||| |||||||| || || ||||| |||||| Sbjct: 7866 tcatctgttcctggtgctggaggatcagcaagggcaaaatcaaattctggacctctcaat 7925 Query: 716 aagcatggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgaccccaatg 775 |||||||||||||||| |||| |||||||||||||||||| || || |||||||||||| Sbjct: 7926 aagcatggagaaccaggaaagaagtcatctggtccccagtcaggcggagtgaccccaatg 7985 Query: 776 gctcgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatcacatct 835 || || |||||||| |||||| | ||||| | |||||||| || ||||| |||||||| Sbjct: 7986 gcacgtcagaattctggtcctttacctcctgttcttcctacaactgggctgatcacatca 8045 Query: 836 ggccctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagtatctgga 895 || ||| | | |||||||| |||||||| |||||||| || | |||||||||| || Sbjct: 8046 gggcctatctcctctggacctctgaattcatctggtgctcc---acgaaaagtatcaggc 8102 Query: 896 tctcttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggct 955 ||||||||||| || ||| |||||| |||| || || || |||||||||||| ||| Sbjct: 8103 cctcttgatcctagtgtatcaatgaagatgcgtgcaacttcttttgctcacaacccagct 8162 Query: 956 gttac 960 ||||| Sbjct: 8163 gttac 8167 Score = 117 bits (59), Expect = 2e-22 Identities = 98/111 (88%) Strand = Plus / Plus Query: 1249 ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 1308 ||||||||| ||||||||||| || || |||||||||||||||||| | || |||||||| Sbjct: 9011 ggttgttacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgt 9070 Query: 1309 gtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgc 1359 ||||||||||||| | |||||||||| |||||||||||||| ||| |||| Sbjct: 9071 gtacacttcaacttgcttgtatgagtacaggggctgggattcgaaagctgc 9121 Score = 97.6 bits (49), Expect = 2e-16 Identities = 169/209 (80%) Strand = Plus / Plus Query: 1409 catgcggtcgatttctacatttcagactttcagtctgggcttcgagcattggtgagaacc 1468 ||||| || ||||||||||| || || || || ||||| || ||||||||||| | ||| Sbjct: 9297 catgctgttgatttctacatctctgatttccaatctggactacgagcattggtcaaaaca 9356 Query: 1469 ggaagcggtgcacgggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcct 1528 ||| || |||||||| || || ||||| |||||||| || || ||||| | || || Sbjct: 9357 ggatatggagcacgggtaaccccttatgttgatgaatctgttgttattgacataaaccca 9416 Query: 1529 gagaacaaggacatgtctcctgaatttttaagatggctacgagaaaggaacctctcaagt 1588 || ||||||||||||||||| || || || |||||||| || |||||||| || |||||| Sbjct: 9417 gataacaaggacatgtctcccgagttcttgagatggctgcgtgaaaggaatctatcaagt 9476 Query: 1589 gatggtcggaaaatgcgcctaaaagaagg 1617 |||| ||||| ||||||||| |||||||| Sbjct: 9477 gatgatcggataatgcgcctgaaagaagg 9505 Score = 85.7 bits (43), Expect = 6e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 1617 gatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttcaaaagaatgagagcg 1676 ||||||| ||||| |||||||| |||||||| ||||| |||||||||| ||| || | || Sbjct: 9642 gatacattaaggagggcagcacggtgagtgttatgggggttgttcaaaggaacgacaacg 9701 Query: 1677 tgttgatgatagtacccccatcagagcccatctcatctggttgccagtggg 1727 |||||||||| || || ||||| || |||||||| |||| |||||||||| Sbjct: 9702 tgttgatgattgttcctccatcggaacccatctccactggctgccagtggg 9752 Score = 73.8 bits (37), Expect = 2e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 1195 tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggt 1251 ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| ||||| Sbjct: 8402 tcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggt 8458
>dbj|AP005410.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0038P10 Length = 148527 Score = 347 bits (175), Expect = 1e-91 Identities = 498/605 (82%), Gaps = 3/605 (0%) Strand = Plus / Plus Query: 356 aacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatctggccga 415 ||||||||||| | |||||||| || || || |||| ||| |||||||| || |||||| Sbjct: 125287 aacatgggttcacggtttccatcccaccaactaagcaatggcctttatgtctcgggccga 125346 Query: 416 cctgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatacactggt 475 || |||||||||||||||||||| || | || | |||| | |||||||||||||| Sbjct: 125347 ccagagcaacctaaggagaaggctccagtcatttgctccacagcaatgccatacactggg 125406 Query: 476 ggtgacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaaagatct 535 ||||||| |||||||||||||| || ||||| |||||||| ||||||| ||||| || Sbjct: 125407 ggtgacataaagaaatctggagaactagggaaaatgtttgacctccatgttgaaaagtcg 125466 Query: 536 agaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggtgctgct 595 | || ||||||||| | || ||| ||||| |||||| |||||||||| ||||||| | Sbjct: 125467 cggaagtctggtcctttgggtaatcaaccttcaagaaatacttcatttggtggtgctggt 125526 Query: 596 tccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttctctttca 655 |||||||||||||| || ||||||||| |||||||| |||||||| |||||| ||||| Sbjct: 125527 tccaactctggaccagtttctaatgctcttggtcggtccaactactctggttctatttca 125586 Query: 656 tcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggaccactcaat 715 || || |||||||||||||||||||||||||| |||||||| || || ||||| |||||| Sbjct: 125587 tcatctgttcctggtgctggaggatcagcaagggcaaaatcaaattctggacctctcaat 125646 Query: 716 aagcatggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgaccccaatg 775 |||||||||||||||| |||| |||||||||||||||||| || || |||||||||||| Sbjct: 125647 aagcatggagaaccaggaaagaagtcatctggtccccagtcaggcggagtgaccccaatg 125706 Query: 776 gctcgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatcacatct 835 || || |||||||| |||||| | ||||| | |||||||| || ||||| |||||||| Sbjct: 125707 gcacgtcagaattctggtcctttacctcctgttcttcctacaactgggctgatcacatca 125766 Query: 836 ggccctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagtatctgga 895 || ||| | | |||||||| |||||||| |||||||| || | |||||||||| || Sbjct: 125767 gggcctatctcctctggacctctgaattcatctggtgctcc---acgaaaagtatcaggc 125823 Query: 896 tctcttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggct 955 ||||||||||| || ||| |||||| |||| || || || |||||||||||| ||| Sbjct: 125824 cctcttgatcctagtgtatcaatgaagatgcgtgcaacttcttttgctcacaacccagct 125883 Query: 956 gttac 960 ||||| Sbjct: 125884 gttac 125888 Score = 117 bits (59), Expect = 2e-22 Identities = 98/111 (88%) Strand = Plus / Plus Query: 1249 ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 1308 ||||||||| ||||||||||| || || |||||||||||||||||| | || |||||||| Sbjct: 126732 ggttgttacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgt 126791 Query: 1309 gtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgc 1359 ||||||||||||| | |||||||||| |||||||||||||| ||| |||| Sbjct: 126792 gtacacttcaacttgcttgtatgagtacaggggctgggattcgaaagctgc 126842 Score = 97.6 bits (49), Expect = 2e-16 Identities = 169/209 (80%) Strand = Plus / Plus Query: 1409 catgcggtcgatttctacatttcagactttcagtctgggcttcgagcattggtgagaacc 1468 ||||| || ||||||||||| || || || || ||||| || ||||||||||| | ||| Sbjct: 127018 catgctgttgatttctacatctctgatttccaatctggactacgagcattggtcaaaaca 127077 Query: 1469 ggaagcggtgcacgggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcct 1528 ||| || |||||||| || || ||||| |||||||| || || ||||| | || || Sbjct: 127078 ggatatggagcacgggtaaccccttatgttgatgaatctgttgttattgacataaaccca 127137 Query: 1529 gagaacaaggacatgtctcctgaatttttaagatggctacgagaaaggaacctctcaagt 1588 || ||||||||||||||||| || || || |||||||| || |||||||| || |||||| Sbjct: 127138 gataacaaggacatgtctcccgagttcttgagatggctgcgtgaaaggaatctatcaagt 127197 Query: 1589 gatggtcggaaaatgcgcctaaaagaagg 1617 |||| ||||| ||||||||| |||||||| Sbjct: 127198 gatgatcggataatgcgcctgaaagaagg 127226 Score = 85.7 bits (43), Expect = 6e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 1617 gatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttcaaaagaatgagagcg 1676 ||||||| ||||| |||||||| |||||||| ||||| |||||||||| ||| || | || Sbjct: 127363 gatacattaaggagggcagcacggtgagtgttatgggggttgttcaaaggaacgacaacg 127422 Query: 1677 tgttgatgatagtacccccatcagagcccatctcatctggttgccagtggg 1727 |||||||||| || || ||||| || |||||||| |||| |||||||||| Sbjct: 127423 tgttgatgattgttcctccatcggaacccatctccactggctgccagtggg 127473 Score = 73.8 bits (37), Expect = 2e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 1195 tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggt 1251 ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| ||||| Sbjct: 126123 tcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggt 126179 Score = 65.9 bits (33), Expect = 6e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 1249 ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 1308 ||||||||| | ||||||||| ||| | |||||||||||||||||| |||| |||||| | Sbjct: 104106 ggttgttacttatggaaattttcccgtcgagtcctcatttcaaagggttccaagatgttt 104047 Query: 1309 gtaca 1313 ||||| Sbjct: 104046 gtaca 104042 Score = 44.1 bits (22), Expect = 2.1 Identities = 58/70 (82%) Strand = Plus / Minus Query: 1617 gatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttcaaaagaatgagagcg 1676 ||||||||||||| ||||||| || || | ||||| |||||||||| ||| || || | Sbjct: 103497 gatacatcaaggagggcagcagagtttgtattatgggggttgttcaaaggaacgacagtg 103438 Query: 1677 tgttgatgat 1686 |||||||||| Sbjct: 103437 tgttgatgat 103428 Score = 44.1 bits (22), Expect = 2.1 Identities = 49/58 (84%) Strand = Plus / Minus Query: 1409 catgcggtcgatttctacatttcagactttcagtctgggcttcgagcattggtgagaa 1466 ||||| ||||||||||||||||| || || || ||||| | ||||||||||| |||| Sbjct: 103774 catgctgtcgatttctacatttctgatttccaatctggacggcgagcattggtcagaa 103717 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1195 tcctgatactgatctcagaactgcaaaagatgga 1228 ||||||| ||||||| ||||| |||||||||||| Sbjct: 104489 tcctgattctgatcttagaacagcaaaagatgga 104456
>dbj|AK069639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026D01, full insert sequence Length = 2080 Score = 347 bits (175), Expect = 1e-91 Identities = 498/605 (82%), Gaps = 3/605 (0%) Strand = Plus / Plus Query: 356 aacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatctggccga 415 ||||||||||| | |||||||| || || || |||| ||| |||||||| || |||||| Sbjct: 334 aacatgggttcacggtttccatcccaccaactaagcaatggcctttatgtctcgggccga 393 Query: 416 cctgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatacactggt 475 || |||||||||||||||||||| || | || | |||| | |||||||||||||| Sbjct: 394 ccagagcaacctaaggagaaggctccagtcatttgctccacagcaatgccatacactggg 453 Query: 476 ggtgacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaaagatct 535 ||||||| |||||||||||||| || ||||| |||||||| ||||||| ||||| || Sbjct: 454 ggtgacataaagaaatctggagaactagggaaaatgtttgacctccatgttgaaaagtcg 513 Query: 536 agaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggtgctgct 595 | || ||||||||| | || ||| ||||| |||||| |||||||||| ||||||| | Sbjct: 514 cggaagtctggtcctttgggtaatcaaccttcaagaaatacttcatttggtggtgctggt 573 Query: 596 tccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttctctttca 655 |||||||||||||| || ||||||||| |||||||| |||||||| |||||| ||||| Sbjct: 574 tccaactctggaccagtttctaatgctcttggtcggtccaactactctggttctatttca 633 Query: 656 tcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggaccactcaat 715 || || |||||||||||||||||||||||||| |||||||| || || ||||| |||||| Sbjct: 634 tcatctgttcctggtgctggaggatcagcaagggcaaaatcaaattctggacctctcaat 693 Query: 716 aagcatggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgaccccaatg 775 |||||||||||||||| |||| |||||||||||||||||| || || |||||||||||| Sbjct: 694 aagcatggagaaccaggaaagaagtcatctggtccccagtcaggcggagtgaccccaatg 753 Query: 776 gctcgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatcacatct 835 || || |||||||| |||||| | ||||| | |||||||| || ||||| |||||||| Sbjct: 754 gcacgtcagaattctggtcctttacctcctgttcttcctacaactgggctgatcacatca 813 Query: 836 ggccctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagtatctgga 895 || ||| | | |||||||| |||||||| |||||||| || | |||||||||| || Sbjct: 814 gggcctatctcctctggacctctgaattcatctggtgctcc---acgaaaagtatcaggc 870 Query: 896 tctcttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggct 955 ||||||||||| || ||| |||||| |||| || || || |||||||||||| ||| Sbjct: 871 cctcttgatcctagtgtatcaatgaagatgcgtgcaacttcttttgctcacaacccagct 930 Query: 956 gttac 960 ||||| Sbjct: 931 gttac 935 Score = 184 bits (93), Expect = 9e-43 Identities = 147/165 (89%) Strand = Plus / Plus Query: 1195 tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggttgt 1254 ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| |||||||| Sbjct: 1170 tcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggttgt 1229 Query: 1255 tacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgtgtacac 1314 ||| ||||||||||| || || |||||||||||||||||| | || |||||||||||||| Sbjct: 1230 tacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgtgtacac 1289 Query: 1315 ttcaactaggctgtatgagtataggggctgggattcaaaaactgc 1359 ||||||| | |||||||||| |||||||||||||| ||| |||| Sbjct: 1290 ttcaacttgcttgtatgagtacaggggctgggattcgaaagctgc 1334 Score = 180 bits (91), Expect = 1e-41 Identities = 262/319 (82%) Strand = Plus / Plus Query: 1409 catgcggtcgatttctacatttcagactttcagtctgggcttcgagcattggtgagaacc 1468 ||||| || ||||||||||| || || || || ||||| || ||||||||||| | ||| Sbjct: 1384 catgctgttgatttctacatctctgatttccaatctggactacgagcattggtcaaaaca 1443 Query: 1469 ggaagcggtgcacgggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcct 1528 ||| || |||||||| || || ||||| |||||||| || || ||||| | || || Sbjct: 1444 ggatatggagcacgggtaaccccttatgttgatgaatctgttgttattgacataaaccca 1503 Query: 1529 gagaacaaggacatgtctcctgaatttttaagatggctacgagaaaggaacctctcaagt 1588 || ||||||||||||||||| || || || |||||||| || |||||||| || |||||| Sbjct: 1504 gataacaaggacatgtctcccgagttcttgagatggctgcgtgaaaggaatctatcaagt 1563 Query: 1589 gatggtcggaaaatgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtg 1648 |||| ||||| ||||||||| |||||||||||||| ||||| |||||||| |||||||| Sbjct: 1564 gatgatcggataatgcgcctgaaagaaggatacattaaggagggcagcacggtgagtgtt 1623 Query: 1649 atgggtgttgttcaaaagaatgagagcgtgttgatgatagtacccccatcagagcccatc 1708 ||||| |||||||||| ||| || | |||||||||||| || || ||||| || |||||| Sbjct: 1624 atgggggttgttcaaaggaacgacaacgtgttgatgattgttcctccatcggaacccatc 1683 Query: 1709 tcatctggttgccagtggg 1727 || |||| |||||||||| Sbjct: 1684 tccactggctgccagtggg 1702
>dbj|AK060252.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-D04, full insert sequence Length = 1786 Score = 347 bits (175), Expect = 1e-91 Identities = 498/605 (82%), Gaps = 3/605 (0%) Strand = Plus / Plus Query: 356 aacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatctggccga 415 ||||||||||| | |||||||| || || || |||| ||| |||||||| || |||||| Sbjct: 37 aacatgggttcacggtttccatcccaccaactaagcaatggcctttatgtctcgggccga 96 Query: 416 cctgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatacactggt 475 || |||||||||||||||||||| || | || | |||| | |||||||||||||| Sbjct: 97 ccagagcaacctaaggagaaggctccagtcatttgctccacagcaatgccatacactggg 156 Query: 476 ggtgacaccaagaaatctggagagcttgggaagatgtttgagctccatgctgaaagatct 535 ||||||| |||||||||||||| || ||||| |||||||| ||||||| ||||| || Sbjct: 157 ggtgacataaagaaatctggagaactagggaaaatgtttgacctccatgttgaaaagtcg 216 Query: 536 agaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggtgctgct 595 | || ||||||||| | || ||| ||||| |||||| |||||||||| ||||||| | Sbjct: 217 cggaagtctggtcctttgggtaatcaaccttcaagaaatacttcatttggtggtgctggt 276 Query: 596 tccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttctctttca 655 |||||||||||||| || ||||||||| |||||||| |||||||| |||||| ||||| Sbjct: 277 tccaactctggaccagtttctaatgctcttggtcggtccaactactctggttctatttca 336 Query: 656 tcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggaccactcaat 715 || || |||||||||||||||||||||||||| |||||||| || || ||||| |||||| Sbjct: 337 tcatctgttcctggtgctggaggatcagcaagggcaaaatcaaattctggacctctcaat 396 Query: 716 aagcatggagaaccagtaaagcggtcatctggtccccagtctggaggtgtgaccccaatg 775 |||||||||||||||| |||| |||||||||||||||||| || || |||||||||||| Sbjct: 397 aagcatggagaaccaggaaagaagtcatctggtccccagtcaggcggagtgaccccaatg 456 Query: 776 gctcgccagaattccggtcctcttcctccaatgcttcctacgaccgggcttatcacatct 835 || || |||||||| |||||| | ||||| | |||||||| || ||||| |||||||| Sbjct: 457 gcacgtcagaattctggtcctttacctcctgttcttcctacaactgggctgatcacatca 516 Query: 836 ggccctgttacttctggaccactgaattcgtctggtgccccaagaagaaaagtatctgga 895 || ||| | | |||||||| |||||||| |||||||| || | |||||||||| || Sbjct: 517 gggcctatctcctctggacctctgaattcatctggtgctcc---acgaaaagtatcaggc 573 Query: 896 tctcttgatcctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggct 955 ||||||||||| || ||| |||||| |||| || || || |||||||||||| ||| Sbjct: 574 cctcttgatcctagtgtatcaatgaagatgcgtgcaacttcttttgctcacaacccagct 633 Query: 956 gttac 960 ||||| Sbjct: 634 gttac 638 Score = 174 bits (88), Expect = 9e-40 Identities = 139/156 (89%) Strand = Plus / Plus Query: 1195 tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggttgt 1254 ||||||| ||||||||||||| |||||| ||||| |||||||||| ||||| |||||||| Sbjct: 873 tcctgatgctgatctcagaacagcaaaaaatggacagtatgtgaaagttactggggttgt 932 Query: 1255 tacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgtgtacac 1314 ||| ||||||||||| || || |||||||||||||||||| | || |||||||||||||| Sbjct: 933 tacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgtgtacac 992 Query: 1315 ttcaactaggctgtatgagtataggggctgggattc 1350 ||||||| | |||||||||| |||||||||||||| Sbjct: 993 ttcaacttgcttgtatgagtacaggggctgggattc 1028 Score = 174 bits (88), Expect = 9e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 1420 tttctacatttcagactttcagtctgggcttcgagcattggtgagaaccggaagcggtgc 1479 ||||||||| || || || || ||||| || ||||||||||| | ||| ||| || || Sbjct: 1098 tttctacatctctgatttccaatctggactacgagcattggtcaaaacaggatatggagc 1157 Query: 1480 acgggtgacaccatatgtcgatgaatccgtagtaattgatgtcaatcctgagaacaagga 1539 |||||| || || ||||| |||||||| || || ||||| | || || || |||||||| Sbjct: 1158 acgggtaaccccttatgttgatgaatctgttgttattgacataaacccagataacaagga 1217 Query: 1540 catgtctcctgaatttttaagatggctacgagaaaggaacctctcaagtgatggtcggaa 1599 ||||||||| || || || |||||||| || |||||||| || |||||||||| ||||| Sbjct: 1218 catgtctcccgagttcttgagatggctgcgtgaaaggaatctatcaagtgatgatcggat 1277 Query: 1600 aatgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatgggtgttgt 1659 ||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| ||||| Sbjct: 1278 aatgcgcctgaaagaaggatacattaaggagggcagcacggtgagtgttatgggggttgt 1337 Query: 1660 tcaaaagaatgagagcgtgttgatgatagtacccccatcagagcccatctcatctggttg 1719 ||||| ||| || | |||||||||||| || || ||||| || |||||||| |||| || Sbjct: 1338 tcaaaggaacgacaacgtgttgatgattgttcctccatcggaacccatctccactggctg 1397 Query: 1720 ccagtggg 1727 |||||||| Sbjct: 1398 ccagtggg 1405
>gb|AY107919.1| Zea mays PCO100890 mRNA sequence Length = 660 Score = 127 bits (64), Expect = 2e-25 Identities = 163/196 (83%) Strand = Plus / Plus Query: 535 tagaaaatctggtcctctaggcaatgctccttcgagaaatccttcatttggcggtgctgc 594 ||||||||||||||| | || ||| | ||||| || ||| |||| ||||| |||||||| Sbjct: 431 tagaaaatctggtccattgggtaatccgccttcaaggaatacttcctttggtggtgctgc 490 Query: 595 ttccaactctggacctgtctctaatgctggcggtcggtcaaactactcgggttctctttc 654 ||||||||||||| || || ||||||| |||||| || |||||||| |||||| |||| Sbjct: 491 cgccaactctggaccagtttccaatgctgtcggtcgctccaactactctggttctatttc 550 Query: 655 atcttcagttcctggtgctggaggatcagcaagagcaaaatctaactccggaccactcaa 714 ||| |||||||||| |||||||||| | || ||||||||||||| ||||| ||||| Sbjct: 551 gtctgcagttcctggcactggaggatcttctaggacaaaatctaactctggacctctcaa 610 Query: 715 taagcatggagaacca 730 ||||||||||||||| Sbjct: 611 caagcatggagaacca 626 Score = 91.7 bits (46), Expect = 1e-14 Identities = 136/166 (81%) Strand = Plus / Plus Query: 358 catgggttctagatttccatcacatcagctgagcagtggtctttatgtatctggccgacc 417 ||||||||| | |||||||| |||||||| |||| ||| | ||||| ||||||||||| Sbjct: 266 catgggttcgcggtttccatcccatcagctaagcaatggcttgtatgtctctggccgacc 325 Query: 418 tgagcaacctaaggagaaggccccgacctttggatccaatgtgatgccatacactggtgg 477 |||||||||||| ||||||||||| | || | ||| | ||||| |||||||| || Sbjct: 326 tgagcaacctaaagagaaggccccagtcatttgctcctcggctatgccgtacactggcgg 385 Query: 478 tgacaccaagaaatctggagagcttgggaagatgtttgagctccat 523 |||| |||||||||||||| ||||| ||||||||||| |||||| Sbjct: 386 ggacataaagaaatctggagaacttggaaagatgtttgatctccat 431
>gb|BT017922.1| Zea mays clone EL01N0519C02.c mRNA sequence Length = 1074 Score = 117 bits (59), Expect = 2e-22 Identities = 149/179 (83%) Strand = Plus / Plus Query: 1211 agaactgcaaaagatggagagtatgtgaaggttacaggggttgttacgtgtggaaatttc 1270 |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 18 agaactgcaaaagatggagagtatgttcctgttactggggttgttacttgtggaaatttg 77 Query: 1271 cccctggagtcctcatttcaaaggattccgagatgtgtgtacacttcaactaggctgtat 1330 ||||| ||||||||||| ||| || | || |||||||||||||||||||| | |||| Sbjct: 78 ccccttgagtcctcattccaacgggtgccacgatgtgtgtacacttcaacttgcttgtac 137 Query: 1331 gagtataggggctgggattcaaaaactgcaaaccccaagcatcgccggtttacctgggg 1389 ||||| ||||| ||||| || ||| | |||||| ||| || || |||||||| ||||| Sbjct: 138 gagtacaggggttgggactcgaaagccgcaaacgccacacaccgacggtttacttgggg 196 Score = 103 bits (52), Expect = 3e-18 Identities = 109/128 (85%) Strand = Plus / Plus Query: 1601 atgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatgggtgttgtt 1660 |||||||| |||||||||||||||||||| |||||||| ||||| |||||||| || ||| Sbjct: 408 atgcgcctcaaagaaggatacatcaaggagggcagcaccgtgagcgtgatgggcgtcgtt 467 Query: 1661 caaaagaatgagagcgtgttgatgatagtacccccatcagagcccatctcatctggttgc 1720 || | ||| |||| |||| ||||||| || || ||| | ||||||||||| |||| ||| Sbjct: 468 cagaggaacgagaacgtgctgatgatcgttcctccagccgagcccatctccactggctgc 527 Query: 1721 cagtgggg 1728 |||||||| Sbjct: 528 cagtgggg 535
>gb|BT013729.1| Lycopersicon esculentum clone 132589F, mRNA sequence Length = 1921 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 359 atgggttctagatttccatcacatcagctgagcagtggtctttatgtatctggccgacct 418 ||||||||| |||| ||||| |||||| |||| ||||| ||||||||||||||||| ||| Sbjct: 159 atgggttctcgattcccatctcatcagttgagtagtggcctttatgtatctggccggcct 218 Query: 419 gagca 423 ||||| Sbjct: 219 gagca 223 Score = 46.1 bits (23), Expect = 0.54 Identities = 98/123 (79%) Strand = Plus / Plus Query: 1537 ggacatgtctcctgaatttttaagatggctacgagaaaggaacctctcaagtgatggtcg 1596 ||||||||| ||||||||| | |||||||| ||| || || || || ||||||| || Sbjct: 1304 ggacatgtcacctgaatttgtcagatggctggcagagagaaatctatccagtgatgaccg 1363 Query: 1597 gaaaatgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatgggtgt 1656 | |||||| | |||||||| || || || ||||| |||||||||||||| ||||| || Sbjct: 1364 aataatgcgattgaaagaagggtatataaaagaaggtagcactgtgagtgtaatgggagt 1423 Query: 1657 tgt 1659 ||| Sbjct: 1424 tgt 1426
>emb|AJ234565.1|HVU234565 Hordeum vulgare genomic DNA fragment; clone MWG0808.uni Length = 326 Score = 61.9 bits (31), Expect = 9e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 356 aacatgggttctagatttccatcacatcagctgagcagtggtctttatgtatctggccga 415 |||||||||||| | |||||||| || || | |||| ||| |||||||| ||||| ||| Sbjct: 97 aacatgggttctcggtttccatcccaccaattaagcaatgggctttatgtctctgggcga 38 Query: 416 cctgagcaacctaaggagaaggc 438 ||||||||||| ||||| ||||| Sbjct: 37 cctgagcaaccaaaggaaaaggc 15
>ref|NM_106536.3| Arabidopsis thaliana unknown protein (AT1G78880) mRNA, complete cds Length = 2202 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||||||||| |||||||| | ||||||||| ||||| | |||||||||||||| Sbjct: 466 atgccatacaccggtggtgatatcaagaaatcaggagaattggggaagatgtttga 521 Score = 46.1 bits (23), Expect = 0.54 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1398 cagcagagcggcatgcggtcgatttctacatttcagactttcagtctgggcttcgagcat 1457 |||||||| |||||| ||| || ||||||||||| || || || |||||||| | |||| Sbjct: 1358 cagcagagaggcatgtggtagacttctacatttctgatttccaatctgggctcagggcat 1417 Query: 1458 tggtgagaaccggaagcggtgca 1480 |||| | ||| |||| ||||||| Sbjct: 1418 tggtcaaaactggaaacggtgca 1440
>gb|BT000364.1| Arabidopsis thaliana unknown protein (At1g78880) mRNA, complete cds Length = 1434 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||||||||| |||||||| | ||||||||| ||||| | |||||||||||||| Sbjct: 103 atgccatacaccggtggtgatatcaagaaatcaggagaattggggaagatgtttga 158 Score = 46.1 bits (23), Expect = 0.54 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1398 cagcagagcggcatgcggtcgatttctacatttcagactttcagtctgggcttcgagcat 1457 |||||||| |||||| ||| || ||||||||||| || || || |||||||| | |||| Sbjct: 995 cagcagagaggcatgtggtagacttctacatttctgatttccaatctgggctcagggcat 1054 Query: 1458 tggtgagaaccggaagcggtgca 1480 |||| | ||| |||| ||||||| Sbjct: 1055 tggtcaaaactggaaacggtgca 1077
>gb|AY096686.1| Arabidopsis thaliana unknown protein (At1g78880) mRNA, complete cds Length = 1438 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||||||||| |||||||| | ||||||||| ||||| | |||||||||||||| Sbjct: 103 atgccatacaccggtggtgatatcaagaaatcaggagaattggggaagatgtttga 158 Score = 46.1 bits (23), Expect = 0.54 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1398 cagcagagcggcatgcggtcgatttctacatttcagactttcagtctgggcttcgagcat 1457 |||||||| |||||| ||| || ||||||||||| || || || |||||||| | |||| Sbjct: 995 cagcagagaggcatgtggtagacttctacatttctgatttccaatctgggctcagggcat 1054 Query: 1458 tggtgagaaccggaagcggtgca 1480 |||| | ||| |||| ||||||| Sbjct: 1055 tggtcaaaactggaaacggtgca 1077
>gb|AY072176.1| Arabidopsis thaliana unknown protein (At1g78880) mRNA, complete cds Length = 2187 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||||||||| |||||||| | ||||||||| ||||| | |||||||||||||| Sbjct: 465 atgccatacaccggtggtgatatcaagaaatcaggagaattggggaagatgtttga 520 Score = 46.1 bits (23), Expect = 0.54 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1398 cagcagagcggcatgcggtcgatttctacatttcagactttcagtctgggcttcgagcat 1457 |||||||| |||||| ||| || ||||||||||| || || || |||||||| | |||| Sbjct: 1357 cagcagagaggcatgtggtagacttctacatttctgatttccaatctgggctcagggcat 1416 Query: 1458 tggtgagaaccggaagcggtgca 1480 |||| | ||| |||| ||||||| Sbjct: 1417 tggtcaaaactggaaacggtgca 1439
>gb|AY120734.1| Arabidopsis thaliana unknown protein (At1g78880) mRNA, complete cds Length = 2166 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||||||||| |||||||| | ||||||||| ||||| | |||||||||||||| Sbjct: 466 atgccatacaccggtggtgatatcaagaaatcaggagaattggggaagatgtttga 521 Score = 46.1 bits (23), Expect = 0.54 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1398 cagcagagcggcatgcggtcgatttctacatttcagactttcagtctgggcttcgagcat 1457 |||||||| |||||| ||| || ||||||||||| || || || |||||||| | |||| Sbjct: 1358 cagcagagaggcatgtggtagacttctacatttctgatttccaatctgggctcagggcat 1417 Query: 1458 tggtgagaaccggaagcggtgca 1480 |||| | ||| |||| ||||||| Sbjct: 1418 tggtcaaaactggaaacggtgca 1440
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||||||||| |||||||| | ||||||||| ||||| | |||||||||||||| Sbjct: 23172 atgccatacaccggtggtgatatcaagaaatcaggagaattggggaagatgtttga 23227
>gb|AC121957.2| Mus musculus BAC clone RP24-232G13 from 18, complete sequence Length = 178929 Score = 52.0 bits (26), Expect = 0.009 Identities = 26/26 (100%) Strand = Plus / Minus Query: 877 aagaagaaaagtatctggatctcttg 902 |||||||||||||||||||||||||| Sbjct: 31803 aagaagaaaagtatctggatctcttg 31778
>ref|NM_118355.1| Arabidopsis thaliana cysteine-type endopeptidase/ ubiquitin thiolesterase (AT4G22290) mRNA, complete cds Length = 2925 Score = 50.1 bits (25), Expect = 0.035 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1601 atgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatggg 1653 ||||| || |||||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 1129 atgcgtctcaaagaaggatacataaaagaaggaagcacagtgagcgtgatggg 1181
>gb|AY140104.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1717 Score = 50.1 bits (25), Expect = 0.035 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1601 atgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatggg 1653 ||||| || |||||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 1215 atgcgtctcaaagaaggatacataaaagaaggaagcacagtgagcgtgatggg 1267
>gb|BT006592.1| Arabidopsis thaliana At4g22290 mRNA, complete cds Length = 1338 Score = 50.1 bits (25), Expect = 0.035 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1601 atgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatggg 1653 ||||| || |||||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 1129 atgcgtctcaaagaaggatacataaaagaaggaagcacagtgagcgtgatggg 1181
>emb|BX827002.1|CNS0A4AI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB85ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1702 Score = 50.1 bits (25), Expect = 0.035 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1601 atgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatggg 1653 ||||| || |||||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 1198 atgcgtctcaaagaaggatacataaaagaaggaagcacagtgagcgtgatggg 1250
>emb|BX827259.1|CNS0A2E0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS2ZA05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1669 Score = 50.1 bits (25), Expect = 0.035 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1601 atgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatggg 1653 ||||| || |||||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 1189 atgcgtctcaaagaaggatacataaaagaaggaagcacagtgagcgtgatggg 1241
>ref|NM_101547.3| Arabidopsis thaliana unknown protein (AT1G16860) mRNA, complete cds Length = 2215 Score = 48.1 bits (24), Expect = 0.14 Identities = 48/56 (85%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||| |||||||||||||| | ||||| ||| ||||| | |||||||||||||| Sbjct: 517 atgccttacactggtggtgatatcaagagatcaggagaattggggaagatgtttga 572
>gb|BT000665.1| Arabidopsis thaliana clone RAFL07-11-D20 (R10953) unknown protein (At1g16860) mRNA, complete cds Length = 2169 Score = 48.1 bits (24), Expect = 0.14 Identities = 48/56 (85%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||| |||||||||||||| | ||||| ||| ||||| | |||||||||||||| Sbjct: 470 atgccttacactggtggtgatatcaagagatcaggagaattggggaagatgtttga 525
>gb|AY117261.1| Arabidopsis thaliana unknown protein (At1g16860) mRNA, complete cds Length = 1456 Score = 48.1 bits (24), Expect = 0.14 Identities = 48/56 (85%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||| |||||||||||||| | ||||| ||| ||||| | |||||||||||||| Sbjct: 103 atgccttacactggtggtgatatcaagagatcaggagaattggggaagatgtttga 158
>gb|AY050887.1| Arabidopsis thaliana unknown protein (At1g16860) mRNA, complete cds Length = 2043 Score = 48.1 bits (24), Expect = 0.14 Identities = 48/56 (85%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||| |||||||||||||| | ||||| ||| ||||| | |||||||||||||| Sbjct: 465 atgccttacactggtggtgatatcaagagatcaggagaattggggaagatgtttga 520
>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete sequence Length = 90498 Score = 48.1 bits (24), Expect = 0.14 Identities = 48/56 (85%) Strand = Plus / Minus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||| |||||||||||||| | ||||| ||| ||||| | |||||||||||||| Sbjct: 32554 atgccttacactggtggtgatatcaagagatcaggagaattggggaagatgtttga 32499
>gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I1 genomic sequence, complete sequence Length = 93677 Score = 48.1 bits (24), Expect = 0.14 Identities = 48/56 (85%) Strand = Plus / Minus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||| |||||||||||||| | ||||| ||| ||||| | |||||||||||||| Sbjct: 79251 atgccttacactggtggtgatatcaagagatcaggagaattggggaagatgtttga 79196
>emb|BX816953.1|CNS0ADWZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZD10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2129 Score = 48.1 bits (24), Expect = 0.14 Identities = 48/56 (85%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||| |||||||||||||| | ||||| ||| ||||| | |||||||||||||| Sbjct: 517 atgccttacactggtggtgatatcaagagatcaggagaattggggaagatgtttga 572
>emb|BX814062.1|CNS0AC9R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2083 Score = 48.1 bits (24), Expect = 0.14 Identities = 48/56 (85%) Strand = Plus / Plus Query: 461 atgccatacactggtggtgacaccaagaaatctggagagcttgggaagatgtttga 516 ||||| |||||||||||||| | ||||| ||| ||||| | |||||||||||||| Sbjct: 453 atgccttacactggtggtgatatcaagagatcaggagaattggggaagatgtttga 508
>emb|BX826707.1|CNS0A432 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB56ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1673 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1238 aaggttacaggggttgttacgtgtggaa 1265 |||||||||||||||||||| ||||||| Sbjct: 825 aaggttacaggggttgttacatgtggaa 852 Score = 42.1 bits (21), Expect = 8.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1601 atgcgcctaaaagaaggatacatcaaggaaggcagcactgtgagtgtgatggg 1653 ||||| || |||||||||||||| || ||||| || || ||||| |||||||| Sbjct: 1190 atgcgtctcaaagaaggatacataaaagaaggaagaacagtgagcgtgatggg 1242
>gb|AC133504.2| Mus musculus BAC clone RP24-174N6 from chromosome 15, complete sequence Length = 145186 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1218 caaaagatggagagtatgtgaag 1240 ||||||||||||||||||||||| Sbjct: 32841 caaaagatggagagtatgtgaag 32819
>gb|AC124675.9| Mus musculus chromosome 15, clone RP24-88M7, complete sequence Length = 207904 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1218 caaaagatggagagtatgtgaag 1240 ||||||||||||||||||||||| Sbjct: 136012 caaaagatggagagtatgtgaag 135990
>emb|CR753865.8| Zebrafish DNA sequence from clone DKEY-172B2 in linkage group 14, complete sequence Length = 134371 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 actacagctgattgaataataat 330 ||||||||||||||||||||||| Sbjct: 70828 actacagctgattgaataataat 70850
>emb|CT030638.12| Mouse DNA sequence from clone RP23-340M21 on chromosome 14, complete sequence Length = 223278 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1206 atctcagaactgcaaaagatgga 1228 ||||||||||||||||||||||| Sbjct: 98489 atctcagaactgcaaaagatgga 98511
>ref|NM_001067831.1| Oryza sativa (japonica cultivar-group) Os08g0230100 (Os08g0230100) mRNA, complete cds Length = 3513 Score = 44.1 bits (22), Expect = 2.1 Identities = 58/70 (82%) Strand = Plus / Plus Query: 1617 gatacatcaaggaaggcagcactgtgagtgtgatgggtgttgttcaaaagaatgagagcg 1676 ||||||||||||| ||||||| || || | ||||| |||||||||| ||| || || | Sbjct: 3429 gatacatcaaggagggcagcagagtttgtattatgggggttgttcaaaggaacgacagtg 3488 Query: 1677 tgttgatgat 1686 |||||||||| Sbjct: 3489 tgttgatgat 3498
>emb|CT573215.2| Medicago truncatula chromosome 5 clone mth2-51h23, COMPLETE SEQUENCE Length = 121342 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2006 ttttcaatgtgttttgtcctccttcg 2031 ||||||||||||||||||||| |||| Sbjct: 86497 ttttcaatgtgttttgtcctcattcg 86522
>emb|AJ833968.1| Zea mays partial mRNA for hypothetical protein (cuc3 gene), and 3' UTR Length = 1300 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1801 accagtatagcaagctgatgat 1822 |||||||||||||||||||||| Sbjct: 488 accagtatagcaagctgatgat 509
>gb|AC005171.3| Arabidopsis thaliana chromosome 2 clone T4E14 map mi310, complete sequence Length = 138181 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1123 ttctgctgctgcacttgtgtct 1144 |||||||||||||||||||||| Sbjct: 61876 ttctgctgctgcacttgtgtct 61855
>ref|NM_001067885.1| Oryza sativa (japonica cultivar-group) Os08g0244400 (Os08g0244400) mRNA, partial cds Length = 1499 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 982 tttctcagttatgggaagcat 1002 ||||||||||||||||||||| Sbjct: 1245 tttctcagttatgggaagcat 1265
>gb|AC187851.2| Pan troglodytes chromosome X clone RP43-41J12 map human ortholog p11.23, complete sequence Length = 187722 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2049 atgagctctcaatacttgtgtaata 2073 ||||||||||||||||| ||||||| Sbjct: 10328 atgagctctcaatacttatgtaata 10352
>gb|AC151341.2| Xenopus tropicalis clone ISB-362O14, complete sequence Length = 75913 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1058 ggtctcttcattcttattgct 1078 ||||||||||||||||||||| Sbjct: 71142 ggtctcttcattcttattgct 71162
>ref|XM_629229.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0219838) mRNA, complete cds Length = 2364 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1102 agttgttgttgcaatgattggttctgctgctgc 1134 |||||||| ||||||||||| | |||||||||| Sbjct: 1503 agttgttgatgcaatgattgctgctgctgctgc 1471
>gb|AC150392.2| Branchiostoma floridae clone CH302-12P3, complete sequence Length = 180902 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1691 cccccatcagagcccatctcatctg 1715 |||||||||||||||| |||||||| Sbjct: 99143 cccccatcagagcccaactcatctg 99167
>gb|AC123898.40| Medicago truncatula clone mth2-31m6, complete sequence Length = 152299 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 ttgaataataatatatacttg 339 ||||||||||||||||||||| Sbjct: 84457 ttgaataataatatatacttg 84437
>gb|AF207550.3| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 128713 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2049 atgagctctcaatacttgtgtaata 2073 ||||||||||||||||| ||||||| Sbjct: 25893 atgagctctcaatacttatgtaata 25917
>gb|AC101093.9| Mus musculus chromosome 3, clone RP23-90B11, complete sequence Length = 167727 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 gggaagatgtttgagctccat 523 ||||||||||||||||||||| Sbjct: 13155 gggaagatgtttgagctccat 13175
>gb|AC153572.13| Mus musculus 10 BAC RP23-187O15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210950 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2165 tattgttgctgttacttttat 2185 ||||||||||||||||||||| Sbjct: 132154 tattgttgctgttacttttat 132134
>gb|AC148226.7| Medicago truncatula clone mth2-5i20, complete sequence Length = 84259 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2006 ttttcaatgtgttttgtcctc 2026 ||||||||||||||||||||| Sbjct: 3773 ttttcaatgtgttttgtcctc 3793
>gb|AC136611.2| Homo sapiens chromosome 16 clone RP11-159J3, complete sequence Length = 158324 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1914 aactgagaaaaatgtacaaat 1934 ||||||||||||||||||||| Sbjct: 93604 aactgagaaaaatgtacaaat 93624
>gb|BC063483.1| Homo sapiens cDNA clone IMAGE:5242363, partial cds Length = 3041 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 929 gccacatcgcttgctcacaac 949 ||||||||||||||||||||| Sbjct: 551 gccacatcgcttgctcacaac 531
>gb|AC122891.4| Mus musculus BAC clone RP23-66J6 from 12, complete sequence Length = 205784 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 645 gttctctttcatcttcagttc 665 ||||||||||||||||||||| Sbjct: 16636 gttctctttcatcttcagttc 16616
>gb|AC009030.10| Homo sapiens chromosome 16 clone RP11-13G6, complete sequence Length = 189379 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1914 aactgagaaaaatgtacaaat 1934 ||||||||||||||||||||| Sbjct: 9011 aactgagaaaaatgtacaaat 9031
>gb|AC048383.25| Homo sapiens chromosome 15, clone RP11-543G18, complete sequence Length = 192235 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 905 cctgctgcatcgatgaaggtg 925 ||||||||||||||||||||| Sbjct: 159576 cctgctgcatcgatgaaggtg 159596
>gb|AC158562.8| Mus musculus chromosome 8, clone RP24-275J2, complete sequence Length = 181144 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1132 tgcacttgtgtcttggaatgt 1152 ||||||||||||||||||||| Sbjct: 158788 tgcacttgtgtcttggaatgt 158808
>gb|AC090495.5| Genomic sequence for Mus musculus, clone RP23-60B7, complete sequence Length = 82400 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1211 agaactgcaaaagatggagag 1231 ||||||||||||||||||||| Sbjct: 62660 agaactgcaaaagatggagag 62680
>gb|AC005743.5| Mus musculus strain 129S6/SvEvTac chromosome 8c1 clone rp21-657p21, complete sequence Length = 185548 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1132 tgcacttgtgtcttggaatgt 1152 ||||||||||||||||||||| Sbjct: 86535 tgcacttgtgtcttggaatgt 86555
>emb|AL731556.11| Human DNA sequence from clone RP11-428P16 on chromosome 10 Contains the 5' end of the KCNMA1 gene for potassium large conductance calcium-activated channel subfamily M alpha member 1, a novel zinc finger pseudogene (KIAA1629) and two CpG islands, complete sequence Length = 203003 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 493 tggagagcttgggaagatgtt 513 ||||||||||||||||||||| Sbjct: 60704 tggagagcttgggaagatgtt 60724
>emb|AL158167.15| Human DNA sequence from clone RP11-534G20 on chromosome 10 Contains two novel genes and the 3' end of the SVIL gene for supervillin (archvillin) and a CpG island, complete sequence Length = 227744 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 929 gccacatcgcttgctcacaac 949 ||||||||||||||||||||| Sbjct: 194806 gccacatcgcttgctcacaac 194786
>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0437G01 Length = 147101 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 982 tttctcagttatgggaagcat 1002 ||||||||||||||||||||| Sbjct: 84808 tttctcagttatgggaagcat 84788
>gb|AC078795.19| Homo sapiens 3 BAC RP11-362K14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125445 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1064 ttcattcttattgctgttcac 1084 ||||||||||||||||||||| Sbjct: 73881 ttcattcttattgctgttcac 73901
>gb|AC008055.7| Homo sapiens 12 BAC RP11-718L23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 196753 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2102 gttgaatcgggtttatgtgttattt 2126 |||||||| |||||||||||||||| Sbjct: 36958 gttgaatctggtttatgtgttattt 36934
>dbj|AK103017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116N08, full insert sequence Length = 1500 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 982 tttctcagttatgggaagcat 1002 ||||||||||||||||||||| Sbjct: 1246 tttctcagttatgggaagcat 1266
>dbj|AK072666.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134A15, full insert sequence Length = 1289 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 982 tttctcagttatgggaagcat 1002 ||||||||||||||||||||| Sbjct: 123 tttctcagttatgggaagcat 143
>gb|AC171338.5| Rhesus Macaque BAC CH250-526I15 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 165606 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1332 agtataggggctgggattcaaaaac 1356 ||||||||||||||| ||||||||| Sbjct: 134688 agtataggggctgggtttcaaaaac 134712
>dbj|AB042425.1| Homo sapiens Pim-2h, UGT1, UGT2 genes for pim-2 protooncogene homolog, UDP-galactose transporter 1, UDP-galactose transporter 2, complete cds Length = 19185 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2049 atgagctctcaatacttgtgtaata 2073 ||||||||||||||||| ||||||| Sbjct: 3226 atgagctctcaatacttatgtaata 3202 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 388,539,958 Number of extensions: 20557337 Number of successful extensions: 101307 Number of sequences better than 10.0: 75 Number of HSP's gapped: 101269 Number of HSP's successfully gapped: 167 Length of query: 2204 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2181 Effective length of database: 18,503,978,556 Effective search space: 40357177230636 Effective search space used: 40357177230636 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
