ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf44f08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK119730:Os08g0532300 | 210 | 1e-54 | 2 | AK065141:Os08g0532300 | 210 | 1e-54 | 3 | AB011262:Os08g0532300 | 210 | 1e-54 | 4 | AK098941:Os01g0788200 | 138 | 4e-33 | 5 | AK073030:Os01g0788200 | 138 | 4e-33 | 6 | AK101352:Os07g0603100 | 51 | 1e-06 | 7 | AK070143:Os02g0497700 | 49 | 3e-06 | 8 | AK101685:Os03g0418800 | 46 | 3e-05 | 9 | AK101615:Os04g0372800 | 46 | 3e-05 | 10 | AK072990:Os04g0556000 | 33 | 0.17 | 11 | AK063759:Os04g0556000 | 33 | 0.17 | 12 | AK106894:Os07g0606000 | 29 | 0.77 | 13 | AK072242:Os10g0447900 | 30 | 1.4 | 14 | Os04g0559100:Os04g0559100 | 28 | 5.4 | 15 | AK111746:Os07g0678300 | 28 | 5.4 | 16 | AK066463:Os05g0302300 | 28 | 5.4 | 17 | AK111166: | 28 | 7.1 | 18 | AK102859:Os08g0528700 | 23 | 7.4 | 19 | Os03g0850300:Os03g0850300 | 28 | 9.2 | 20 | Os11g0502200:Os11g0502200 | 28 | 9.2 | 21 | AK105271:Os07g0231900 | 28 | 9.2 |
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>AK119730:Os08g0532300 | Length = 122 Score = 210 bits (534), Expect = 1e-54 Identities = 98/122 (80%), Positives = 110/122 (90%) Frame = +2 Query: 113 MDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQC 292 MD D+V+KAFV+HYY+TFD+NR ALV LYQDGSMLTFEG++F G AAIAGKLGSLPF QC Sbjct: 1 MDADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQC 60 Query: 293 QHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDKFRLN 472 H I+TVDCQPSGPQGG+LVFVSG++ TGP EHPLKFSQMF LLPAGG+FYVQND FRLN Sbjct: 61 HHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPAGGNFYVQNDMFRLN 120 Query: 473 YG 478 YG Sbjct: 121 YG 122
>AK065141:Os08g0532300 | Length = 122 Score = 210 bits (534), Expect = 1e-54 Identities = 98/122 (80%), Positives = 110/122 (90%) Frame = +2 Query: 113 MDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQC 292 MD D+V+KAFV+HYY+TFD+NR ALV LYQDGSMLTFEG++F G AAIAGKLGSLPF QC Sbjct: 1 MDADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQC 60 Query: 293 QHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDKFRLN 472 H I+TVDCQPSGPQGG+LVFVSG++ TGP EHPLKFSQMF LLPAGG+FYVQND FRLN Sbjct: 61 HHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPAGGNFYVQNDMFRLN 120 Query: 473 YG 478 YG Sbjct: 121 YG 122
>AB011262:Os08g0532300 | Length = 122 Score = 210 bits (534), Expect = 1e-54 Identities = 98/122 (80%), Positives = 110/122 (90%) Frame = +2 Query: 113 MDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQC 292 MD D+V+KAFV+HYY+TFD+NR ALV LYQDGSMLTFEG++F G AAIAGKLGSLPF QC Sbjct: 1 MDADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQC 60 Query: 293 QHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDKFRLN 472 H I+TVDCQPSGPQGG+LVFVSG++ TGP EHPLKFSQMF LLPAGG+FYVQND FRLN Sbjct: 61 HHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPAGGNFYVQNDMFRLN 120 Query: 473 YG 478 YG Sbjct: 121 YG 122
>AK098941:Os01g0788200 | Length = 146 Score = 138 bits (348), Expect = 4e-33 Identities = 71/121 (58%), Positives = 86/121 (71%), Gaps = 2/121 (1%) Frame = +2 Query: 122 DSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQHK 301 D V++AFV++YYQTFD+NRAAL LY SML+FEG G I KL LPF+QC+H Sbjct: 26 DVVARAFVEYYYQTFDTNRAALAALYGQTSMLSFEGHMVAGAEEIGRKLLGLPFEQCRHA 85 Query: 302 IDTVDCQPSGP-QGGVLVFVSGTITTGPGEHPLKFSQMFHLLP-AGGSFYVQNDKFRLNY 475 + TVDCQP+ GG+LVFVSG + EH L+FSQMF L+P GSF+VQND FRLNY Sbjct: 86 VCTVDCQPTPSFPGGILVFVSGNLQLAGEEHQLRFSQMFQLVPNEQGSFFVQNDIFRLNY 145 Query: 476 G 478 G Sbjct: 146 G 146
>AK073030:Os01g0788200 | Length = 146 Score = 138 bits (348), Expect = 4e-33 Identities = 71/121 (58%), Positives = 86/121 (71%), Gaps = 2/121 (1%) Frame = +2 Query: 122 DSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQHK 301 D V++AFV++YYQTFD+NRAAL LY SML+FEG G I KL LPF+QC+H Sbjct: 26 DVVARAFVEYYYQTFDTNRAALAALYGQTSMLSFEGHMVAGAEEIGRKLLGLPFEQCRHA 85 Query: 302 IDTVDCQPSGP-QGGVLVFVSGTITTGPGEHPLKFSQMFHLLP-AGGSFYVQNDKFRLNY 475 + TVDCQP+ GG+LVFVSG + EH L+FSQMF L+P GSF+VQND FRLNY Sbjct: 86 VCTVDCQPTPSFPGGILVFVSGNLQLAGEEHQLRFSQMFQLVPNEQGSFFVQNDIFRLNY 145 Query: 476 G 478 G Sbjct: 146 G 146
>AK101352:Os07g0603100 | Length = 569 Score = 50.8 bits (120), Expect = 1e-06 Identities = 43/132 (32%), Positives = 56/132 (42%), Gaps = 14/132 (10%) Frame = +2 Query: 113 MDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGP------------AAI 256 + P + AFVQ YY S+ + Y D S L G P AI Sbjct: 12 LSPQMIGNAFVQQYYNVLHSSPGQVCKFYHDSSTL-------GRPDSNGTMTSVTTLTAI 64 Query: 257 AGKLGSLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTI-TTGPGEHPLKFSQMFHLLP-A 430 + S F C K++ VD Q S GGV + V+G+I G H +FSQ F L P Sbjct: 65 NDEFLSTDFSSCLIKLENVDAQLS-LNGGVHILVTGSIGHNGTMRH--RFSQSFFLAPQE 121 Query: 431 GGSFYVQNDKFR 466 G ++V ND R Sbjct: 122 SGGYFVLNDMLR 133
>AK070143:Os02g0497700 | Length = 480 Score = 49.3 bits (116), Expect = 3e-06 Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 7/120 (5%) Frame = +2 Query: 128 VSKAFVQHYYQTFDSNRAALVGLYQDGSML-TFEGEKFGGPA------AIAGKLGSLPFQ 286 V AFVQ YYQ + + YQD S L +++G AI K+ ++ Sbjct: 15 VGNAFVQQYYQILHQSPDLVYRFYQDASRLGRPPADRYGDMVSVTTMEAINEKIMAMDMS 74 Query: 287 QCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDKFR 466 + + I TVD Q S GGV V V+G +T G +FSQ F L P ++V ND FR Sbjct: 75 RAE--IKTVDSQES-LGGGVTVLVTGHLTVRDGV-CREFSQSFFLAPQEKGYFVLNDMFR 130
>AK101685:Os03g0418800 | Length = 488 Score = 45.8 bits (107), Expect = 3e-05 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Frame = +2 Query: 113 MDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGE----KFGGPAAIAGK-LGSL 277 + P +S AFVQ YY + YQD S++ K+ A K + S+ Sbjct: 12 ISPQVISGAFVQQYYHILHETPDQVYKFYQDASIVGRPDSNGVMKYVSTTADINKIILSM 71 Query: 278 PFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLP-AGGSFYVQN 454 F +I+T D Q S Q GVL+ V+G++T+ +F+Q F L P G + V N Sbjct: 72 DFSNYLTEIETADAQLS-HQDGVLIVVTGSLTS--EGICRRFTQSFFLAPQESGGYVVLN 128 Query: 455 DKFR 466 D FR Sbjct: 129 DIFR 132
>AK101615:Os04g0372800 | Length = 486 Score = 45.8 bits (107), Expect = 3e-05 Identities = 45/147 (30%), Positives = 60/147 (40%), Gaps = 7/147 (4%) Frame = +2 Query: 65 APNPKRGEARRAEGEAMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSML-------TF 223 A P + A G V AFV YY + + YQDGS + Sbjct: 2 ASPPPPPPSAAAPGSPPSAQVVGNAFVHQYYNILHQSPDLVHRFYQDGSRIGRPASPAAA 61 Query: 224 EGEKFGGPAAIAGKLGSLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKF 403 E + AI K+ S+ + + I VD Q S GGV V V+G + TG + +F Sbjct: 62 EMDTVTTMEAINAKIVSMDIVRAE--IKAVDAQES-LGGGVTVLVTGHL-TGSDDVRREF 117 Query: 404 SQMFHLLPAGGSFYVQNDKFRLNYG*G 484 SQ F L P ++V ND R G G Sbjct: 118 SQSFFLAPQEKGYFVLNDILRYVGGEG 144
>AK072990:Os04g0556000 | Length = 1002 Score = 33.5 bits (75), Expect = 0.17 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = -2 Query: 417 WNICENLRGCSPGPVVMVPETKTRTPPW--GPEGWQSTVSILCW 292 W + N+ G V+ P T+ R PPW G S+VS++CW Sbjct: 945 WALGYNIIGIPIAAGVLFPSTRFRLPPWVAGAAMAASSVSVVCW 988
>AK063759:Os04g0556000 | Length = 576 Score = 33.5 bits (75), Expect = 0.17 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = -2 Query: 417 WNICENLRGCSPGPVVMVPETKTRTPPW--GPEGWQSTVSILCW 292 W + N+ G V+ P T+ R PPW G S+VS++CW Sbjct: 519 WALGYNIIGIPIAAGVLFPSTRFRLPPWVAGAAMAASSVSVVCW 562
>AK106894:Os07g0606000 | Length = 196 Score = 29.3 bits (64), Expect(2) = 0.77 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 3 RTPLPHLPNSGSQHPKPPHPELQTLSEARR 92 R+PLP L + G + +PP P + EARR Sbjct: 36 RSPLPPLGSRGGEEDRPPLPRRRRPREARR 65 Score = 20.8 bits (42), Expect(2) = 0.77 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = +1 Query: 169 LQPRRAGGAVPGRLHAH 219 LQPRR+ ++ +H H Sbjct: 74 LQPRRSSPSIAAFIHRH 90
>AK072242:Os10g0447900 | Length = 515 Score = 30.4 bits (67), Expect = 1.4 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 6/69 (8%) Frame = -2 Query: 363 PETKTRTPPWG-PEGWQS-TVSILCWHCWKGRDP----SLPAMAAGPPNFSPSKVSMEPS 202 P + + + PW P W + T S C +GR S A A+ PP+ + S + P+ Sbjct: 12 PSSASSSAPWSSPSSWSAPTCSSTSATCCRGRAAAARTSSSASASSPPSPARSSPTTPPA 71 Query: 201 WYSPTSAAR 175 SP+S++R Sbjct: 72 SSSPSSSSR 80
>Os04g0559100:Os04g0559100 | Length = 532 Score = 28.5 bits (62), Expect = 5.4 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +3 Query: 51 PPHPELQTLSEARRGAQRERQ 113 PP P LQ L ARRGA R+R+ Sbjct: 69 PPPPLLQKLGAARRGAGRDRK 89
>AK111746:Os07g0678300 | Length = 498 Score = 28.5 bits (62), Expect = 5.4 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +2 Query: 200 QDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQHKI 304 ++G M+T EG+K GP + G+ G + + C KI Sbjct: 429 KEGYMVTREGKKGTGPVYVKGENGGIVAKVCVFKI 463
>AK066463:Os05g0302300 | Length = 971 Score = 28.5 bits (62), Expect = 5.4 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +2 Query: 50 ASASRAPNPKRGEARRAEGEAMDPDSVS 133 ASA P P+RGE RR G P+ S Sbjct: 11 ASAPPPPPPRRGEKRRMRGRTPSPEPAS 38
>AK111166: | Length = 613 Score = 28.1 bits (61), Expect = 7.1 Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Frame = +2 Query: 53 SASRAPNPKRGEARRAEGEAMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGE 232 S + P P R +A AE E D D A V+ + FDS R F+G Sbjct: 63 SLNPPPAPLRLQAPTAEQEQADYD----AAVKQVQEWFDSPR--------------FKGI 104 Query: 233 KFG-GPAAIAGKLGSLPFQ 286 K GP A+ K GS+P Q Sbjct: 105 KRPYGPEAVVSKRGSMPVQ 123
>AK102859:Os08g0528700 | Length = 187 Score = 23.5 bits (49), Expect(2) = 7.4 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%) Frame = -3 Query: 197 TAPPAR---RGWSRTSGSSAERRPSTPN 123 +A PAR R + GSSA RRP++P+ Sbjct: 77 SASPARTSPRSSPPSHGSSAPRRPASPS 104 Score = 23.1 bits (48), Expect(2) = 7.4 Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 6/77 (7%) Frame = -2 Query: 390 CSPGPVVMVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFS------ 229 C+P P PP P W++T S S P + PP S Sbjct: 13 CTPTAASTPPPPPGPPPPRHPSPWRTTSSTPA--------ASPPPRRSKPPRTSPTSSPP 64 Query: 228 PSKVSMEPSWYSPTSAA 178 PS+ PS SP SA+ Sbjct: 65 PSRTRCSPS--SPGSAS 79
>Os03g0850300:Os03g0850300 | Length = 304 Score = 27.7 bits (60), Expect = 9.2 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 18/56 (32%) Frame = +3 Query: 9 PLP---HLPNSGSQHPKPP---HPE--LQTLSEARRGAQRERQ----------WIP 122 PLP H S S HP+PP HPE L L+ + A R Q WIP Sbjct: 120 PLPQRRHHKTSSSSHPRPPRRAHPEDALDPLNHSSAAAHRRGQKPAQRRPRTAWIP 175
>Os11g0502200:Os11g0502200 | Length = 1099 Score = 27.7 bits (60), Expect = 9.2 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -2 Query: 459 LSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPP 337 LSF + + P A S+WN SP P P K TPP Sbjct: 267 LSFYSRRSPRAASRWNRPPRSSSASPAP-FNPPAAKPATPP 306
>AK105271:Os07g0231900 | Length = 481 Score = 27.7 bits (60), Expect = 9.2 Identities = 13/44 (29%), Positives = 21/44 (47%) Frame = +1 Query: 586 AIYCKKWPDLIGIHQIIFCFVFSMYCRCLGSTFFGMLMETVLVL 717 AIYC +P + I I+ C M + FG+ + T+ +L Sbjct: 328 AIYCSPYPAVTSISTIVKCIDMFMQFNQVARPLFGIGVRTIALL 371 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 22,672,545 Number of extensions: 547894 Number of successful extensions: 2179 Number of sequences better than 10.0: 21 Number of HSP's gapped: 2175 Number of HSP's successfully gapped: 23 Length of query: 258 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 160 Effective length of database: 11,475,837 Effective search space: 1836133920 Effective search space used: 1836133920 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
