ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf44d23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099625:Os01g0624000 | 1356 | 0.0 | 2 | AK069738:Os01g0624000 | 1356 | 0.0 | 3 | AK071073:Os01g0624000 | 765 | 0.0 | 4 | AK071952:Os01g0624000 | 684 | 0.0 | 5 | AK061038:Os10g0521900 | 37 | 0.065 | 6 | Os02g0238300:Os02g0238300 | 32 | 2.1 | 7 | AK120506:Os05g0305600 | 32 | 2.7 | 8 | AK067489:Os05g0305600 | 32 | 2.7 | 9 | AK119314:Os06g0613400 | 31 | 6.1 | 10 | AK063321:Os01g0694900 | 31 | 6.1 |
|---|
>AK099625:Os01g0624000 | Length = 785 Score = 1356 bits (3509), Expect = 0.0 Identities = 668/786 (84%), Positives = 714/786 (90%), Gaps = 1/786 (0%) Frame = +1 Query: 577 MEASSCLRCQVRGFGSSRIWXXXXXXXXXQNCTPVLSDSPYLVGMGSYDITGPAADVNMM 756 MEASS L Q RGFGSSR+W NC+ VLS SPYLVGMGS+DITGPAADVNMM Sbjct: 1 MEASSWLCYQARGFGSSRVWLWLLLALVLLNCSLVLSASPYLVGMGSFDITGPAADVNMM 60 Query: 757 GYANTEQIASGIHFRLKSRAFIVAEPNGERVVFVNLDACMASQLVNIKVLERLKARYGDL 936 GYANTEQIASGIHFRLKSRAFIVAEPNG+RVVFVN+DACMASQ+V IKVLERLKARYGDL Sbjct: 61 GYANTEQIASGIHFRLKSRAFIVAEPNGKRVVFVNIDACMASQIVTIKVLERLKARYGDL 120 Query: 937 YNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEQSIVEAHNNLHPGK 1116 YNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEQSIVEAHNNL PGK Sbjct: 121 YNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEQSIVEAHNNLRPGK 180 Query: 1117 IYVNKGDLIDAGVNRSPSAYLNNPAEERSKYKYNVDKEMTLVKFVDDESGPVGSFNWFAT 1296 I+VNKGDL+DAGVNRSPSAYLNNPAEERSKY+YNVDKEMTL+KFVDDE GPVGSFNWFAT Sbjct: 181 IFVNKGDLLDAGVNRSPSAYLNNPAEERSKYEYNVDKEMTLIKFVDDELGPVGSFNWFAT 240 Query: 1297 HGTSMSRTNSLISGDNKGAAARFMEDWAEQNGLPKQTGVASSDDLGSLHMTSVLPRRVST 1476 HGTSMSRTNSLISGDNKGAAARFMEDWAEQ GLPKQ+ A+SDDL SLH TSVLPRRVST Sbjct: 241 HGTSMSRTNSLISGDNKGAAARFMEDWAEQMGLPKQSAHANSDDLRSLHKTSVLPRRVST 300 Query: 1477 IIPEPDEITDDLMQLASSYEASGGRRLAGSNITRRIRSSQENNAKFVSAFCQSNCGDVSP 1656 IIPEP+EITDDL+QLASSYEASGGRRLAGS+ITRRIRS+Q+N KFVSAFCQSNCGDVSP Sbjct: 301 IIPEPNEITDDLIQLASSYEASGGRRLAGSSITRRIRSTQQNKPKFVSAFCQSNCGDVSP 360 Query: 1657 NVLGTFCIDTHLPCDFNHSTCNGKNELCYGRGPGYPNEFESTRIIGNRQFLKAVDLFNSA 1836 NVLGTFCIDT+LPCDFNHSTCNGKNELCYGRGPGYP+EFESTR+IGNRQFLKA DLF+SA Sbjct: 361 NVLGTFCIDTNLPCDFNHSTCNGKNELCYGRGPGYPDEFESTRVIGNRQFLKARDLFDSA 420 Query: 1837 SEEIQGKIDYRHTYLDFSQLKVSVSTSTGGPQVVKTCXXXXXXXXXXXXXXXXXXXXFKQ 2016 SEEIQGKIDYRHTYLDFS+L+V VSTS GG Q VKTC F+Q Sbjct: 421 SEEIQGKIDYRHTYLDFSKLEVKVSTSAGGQQTVKTCPAAMGFAFAAGTTDGPGAFDFRQ 480 Query: 2017 GDDKGNPFWRLVRNLLKTPGKEQVECQAPKPILLDTGEMKEPYDWAPAILPIQIIRIGQL 2196 GD KGNPFW+LVRNLLKTPGK+QVEC +PKPILLDTGEMKEPYDWAPAILP+Q+IRIGQL Sbjct: 481 GDVKGNPFWKLVRNLLKTPGKDQVECHSPKPILLDTGEMKEPYDWAPAILPVQMIRIGQL 540 Query: 2197 VILCVPGEFTTMAGRRLRDAVKNVLISGSNSEFGTNIHVVLAGLTNTYSQYVTTFEEYQI 2376 VILCVPGEFTTMAGRRLRDAVK VL SG NSEF NIHVVLAGLTN+YSQY+TTFEEYQI Sbjct: 541 VILCVPGEFTTMAGRRLRDAVKTVLTSG-NSEFDKNIHVVLAGLTNSYSQYITTFEEYQI 599 Query: 2377 QRYEGASTLYGPHTLSAYIQEFQKLATAMIENKEVPTNIQPPDMLEKQIGLLPGVMYDST 2556 QRYEGASTLYGPHTLSAYIQEFQKLA AMI NKEVPTN QPPDML+KQIGLLPGV++DST Sbjct: 600 QRYEGASTLYGPHTLSAYIQEFQKLAMAMIANKEVPTNFQPPDMLDKQIGLLPGVVFDST 659 Query: 2557 PRGVHFGDVSSDVAANSNFRKGSTVNATFYSACPRNDLLTEGTFALVEKLNG-NNWIPVY 2733 P GV FGDV+SDV NS F KGSTVNATFYSACPRNDLLT+GTFALVEKL+G NNW+PVY Sbjct: 660 PLGVKFGDVNSDVPGNSTFNKGSTVNATFYSACPRNDLLTDGTFALVEKLDGNNNWVPVY 719 Query: 2734 DDDDWSLQFKWSRPSKFSPRSFATLEWTIPEDAASGVYRLRHSGASKPLIGSIKHFTGTS 2913 DDDDWSL+FKWSRP++ S RSFATLEWT+PEDAA+GVYRLRH GASKP+ GS++HFTGTS Sbjct: 720 DDDDWSLRFKWSRPARLSSRSFATLEWTVPEDAAAGVYRLRHFGASKPMFGSVRHFTGTS 779 Query: 2914 RAFAVR 2931 RAFAVR Sbjct: 780 RAFAVR 785
>AK069738:Os01g0624000 | Length = 785 Score = 1356 bits (3509), Expect = 0.0 Identities = 668/786 (84%), Positives = 714/786 (90%), Gaps = 1/786 (0%) Frame = +1 Query: 577 MEASSCLRCQVRGFGSSRIWXXXXXXXXXQNCTPVLSDSPYLVGMGSYDITGPAADVNMM 756 MEASS L Q RGFGSSR+W NC+ VLS SPYLVGMGS+DITGPAADVNMM Sbjct: 1 MEASSWLCYQARGFGSSRVWLWLLLALVLLNCSLVLSASPYLVGMGSFDITGPAADVNMM 60 Query: 757 GYANTEQIASGIHFRLKSRAFIVAEPNGERVVFVNLDACMASQLVNIKVLERLKARYGDL 936 GYANTEQIASGIHFRLKSRAFIVAEPNG+RVVFVN+DACMASQ+V IKVLERLKARYGDL Sbjct: 61 GYANTEQIASGIHFRLKSRAFIVAEPNGKRVVFVNIDACMASQIVTIKVLERLKARYGDL 120 Query: 937 YNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEQSIVEAHNNLHPGK 1116 YNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEQSIVEAHNNL PGK Sbjct: 121 YNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEQSIVEAHNNLRPGK 180 Query: 1117 IYVNKGDLIDAGVNRSPSAYLNNPAEERSKYKYNVDKEMTLVKFVDDESGPVGSFNWFAT 1296 I+VNKGDL+DAGVNRSPSAYLNNPAEERSKY+YNVDKEMTL+KFVDDE GPVGSFNWFAT Sbjct: 181 IFVNKGDLLDAGVNRSPSAYLNNPAEERSKYEYNVDKEMTLIKFVDDELGPVGSFNWFAT 240 Query: 1297 HGTSMSRTNSLISGDNKGAAARFMEDWAEQNGLPKQTGVASSDDLGSLHMTSVLPRRVST 1476 HGTSMSRTNSLISGDNKGAAARFMEDWAEQ GLPKQ+ A+SDDL SLH TSVLPRRVST Sbjct: 241 HGTSMSRTNSLISGDNKGAAARFMEDWAEQMGLPKQSAHANSDDLRSLHKTSVLPRRVST 300 Query: 1477 IIPEPDEITDDLMQLASSYEASGGRRLAGSNITRRIRSSQENNAKFVSAFCQSNCGDVSP 1656 IIPEP+EITDDL+QLASSYEASGGRRLAGS+ITRRIRS+Q+N KFVSAFCQSNCGDVSP Sbjct: 301 IIPEPNEITDDLIQLASSYEASGGRRLAGSSITRRIRSTQQNKPKFVSAFCQSNCGDVSP 360 Query: 1657 NVLGTFCIDTHLPCDFNHSTCNGKNELCYGRGPGYPNEFESTRIIGNRQFLKAVDLFNSA 1836 NVLGTFCIDT+LPCDFNHSTCNGKNELCYGRGPGYP+EFESTR+IGNRQFLKA DLF+SA Sbjct: 361 NVLGTFCIDTNLPCDFNHSTCNGKNELCYGRGPGYPDEFESTRVIGNRQFLKARDLFDSA 420 Query: 1837 SEEIQGKIDYRHTYLDFSQLKVSVSTSTGGPQVVKTCXXXXXXXXXXXXXXXXXXXXFKQ 2016 SEEIQGKIDYRHTYLDFS+L+V VSTS GG Q VKTC F+Q Sbjct: 421 SEEIQGKIDYRHTYLDFSKLEVKVSTSAGGQQTVKTCPAAMGFAFAAGTTDGPGAFDFRQ 480 Query: 2017 GDDKGNPFWRLVRNLLKTPGKEQVECQAPKPILLDTGEMKEPYDWAPAILPIQIIRIGQL 2196 GD KGNPFW+LVRNLLKTPGK+QVEC +PKPILLDTGEMKEPYDWAPAILP+Q+IRIGQL Sbjct: 481 GDVKGNPFWKLVRNLLKTPGKDQVECHSPKPILLDTGEMKEPYDWAPAILPVQMIRIGQL 540 Query: 2197 VILCVPGEFTTMAGRRLRDAVKNVLISGSNSEFGTNIHVVLAGLTNTYSQYVTTFEEYQI 2376 VILCVPGEFTTMAGRRLRDAVK VL SG NSEF NIHVVLAGLTN+YSQY+TTFEEYQI Sbjct: 541 VILCVPGEFTTMAGRRLRDAVKTVLTSG-NSEFDKNIHVVLAGLTNSYSQYITTFEEYQI 599 Query: 2377 QRYEGASTLYGPHTLSAYIQEFQKLATAMIENKEVPTNIQPPDMLEKQIGLLPGVMYDST 2556 QRYEGASTLYGPHTLSAYIQEFQKLA AMI NKEVPTN QPPDML+KQIGLLPGV++DST Sbjct: 600 QRYEGASTLYGPHTLSAYIQEFQKLAMAMIANKEVPTNFQPPDMLDKQIGLLPGVVFDST 659 Query: 2557 PRGVHFGDVSSDVAANSNFRKGSTVNATFYSACPRNDLLTEGTFALVEKLNG-NNWIPVY 2733 P GV FGDV+SDV NS F KGSTVNATFYSACPRNDLLT+GTFALVEKL+G NNW+PVY Sbjct: 660 PLGVKFGDVNSDVPGNSTFNKGSTVNATFYSACPRNDLLTDGTFALVEKLDGNNNWVPVY 719 Query: 2734 DDDDWSLQFKWSRPSKFSPRSFATLEWTIPEDAASGVYRLRHSGASKPLIGSIKHFTGTS 2913 DDDDWSL+FKWSRP++ S RSFATLEWT+PEDAA+GVYRLRH GASKP+ GS++HFTGTS Sbjct: 720 DDDDWSLRFKWSRPARLSSRSFATLEWTVPEDAAAGVYRLRHFGASKPMFGSVRHFTGTS 779 Query: 2914 RAFAVR 2931 RAFAVR Sbjct: 780 RAFAVR 785
>AK071073:Os01g0624000 | Length = 426 Score = 765 bits (1975), Expect = 0.0 Identities = 378/426 (88%), Positives = 399/426 (93%) Frame = +1 Query: 577 MEASSCLRCQVRGFGSSRIWXXXXXXXXXQNCTPVLSDSPYLVGMGSYDITGPAADVNMM 756 MEASS L Q RGFGSSR+W NC+ VLS SPYLVGMGS+DITGPAADVNMM Sbjct: 1 MEASSWLCYQARGFGSSRVWLWLLLALVLLNCSLVLSASPYLVGMGSFDITGPAADVNMM 60 Query: 757 GYANTEQIASGIHFRLKSRAFIVAEPNGERVVFVNLDACMASQLVNIKVLERLKARYGDL 936 GYANTEQIASGIHFRLKSRAFIVAEPNG+RVVFVN+DACMASQ+V IKVLERLKARYGDL Sbjct: 61 GYANTEQIASGIHFRLKSRAFIVAEPNGKRVVFVNIDACMASQIVTIKVLERLKARYGDL 120 Query: 937 YNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEQSIVEAHNNLHPGK 1116 YNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEQSIVEAHNNL PGK Sbjct: 121 YNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEQSIVEAHNNLRPGK 180 Query: 1117 IYVNKGDLIDAGVNRSPSAYLNNPAEERSKYKYNVDKEMTLVKFVDDESGPVGSFNWFAT 1296 I+VNKGDL+DAGVNRSPSAYLNNPAEERSKY+YNVDKEMTL+KFVDDE GPVGSFNWFAT Sbjct: 181 IFVNKGDLLDAGVNRSPSAYLNNPAEERSKYEYNVDKEMTLIKFVDDELGPVGSFNWFAT 240 Query: 1297 HGTSMSRTNSLISGDNKGAAARFMEDWAEQNGLPKQTGVASSDDLGSLHMTSVLPRRVST 1476 HGTSMSRTNSLISGDNKGAAARFMEDWAEQ GLPKQ+ A+SDDL SLH TSVLPRRVST Sbjct: 241 HGTSMSRTNSLISGDNKGAAARFMEDWAEQMGLPKQSAHANSDDLRSLHKTSVLPRRVST 300 Query: 1477 IIPEPDEITDDLMQLASSYEASGGRRLAGSNITRRIRSSQENNAKFVSAFCQSNCGDVSP 1656 IIPEP+EITDDL+QLASSYEASGGRRLAGS+ITRRIRS+Q+N KFVSAFCQSNCGDVSP Sbjct: 301 IIPEPNEITDDLIQLASSYEASGGRRLAGSSITRRIRSTQQNKPKFVSAFCQSNCGDVSP 360 Query: 1657 NVLGTFCIDTHLPCDFNHSTCNGKNELCYGRGPGYPNEFESTRIIGNRQFLKAVDLFNSA 1836 NVLGTFCIDT+LPCDFNHSTCNGKNELCYGRGPGYP+EFESTR+IGNRQFLKA DLF+SA Sbjct: 361 NVLGTFCIDTNLPCDFNHSTCNGKNELCYGRGPGYPDEFESTRVIGNRQFLKARDLFDSA 420 Query: 1837 SEEIQG 1854 SEEIQG Sbjct: 421 SEEIQG 426
>AK071952:Os01g0624000 | Length = 405 Score = 684 bits (1765), Expect = 0.0 Identities = 332/406 (81%), Positives = 360/406 (88%), Gaps = 1/406 (0%) Frame = +1 Query: 1717 CNGKNELCYGRGPGYPNEFESTRIIGNRQFLKAVDLFNSASEEIQGKIDYRHTYLDFSQL 1896 CNGKNELCYGRGPGYP+EFESTR+IGNRQFLKA DLF+SASEEIQGKIDYRHTYLDFS+L Sbjct: 1 CNGKNELCYGRGPGYPDEFESTRVIGNRQFLKARDLFDSASEEIQGKIDYRHTYLDFSKL 60 Query: 1897 KVSVSTSTGGPQVVKTCXXXXXXXXXXXXXXXXXXXXFKQGDDKGNPFWRLVRNLLKTPG 2076 +V VSTS GG Q VKTC F+QGD KGNPFW+LVRNLLKTPG Sbjct: 61 EVKVSTSAGGQQTVKTCPAAMGFAFAAGTTDGPGAFDFRQGDVKGNPFWKLVRNLLKTPG 120 Query: 2077 KEQVECQAPKPILLDTGEMKEPYDWAPAILPIQIIRIGQLVILCVPGEFTTMAGRRLRDA 2256 K+QVEC +PKPILLDTGEMKEPYDWAPAILP+Q+IRIGQLVILCVPGEFTTMAGRRLRDA Sbjct: 121 KDQVECHSPKPILLDTGEMKEPYDWAPAILPVQMIRIGQLVILCVPGEFTTMAGRRLRDA 180 Query: 2257 VKNVLISGSNSEFGTNIHVVLAGLTNTYSQYVTTFEEYQIQRYEGASTLYGPHTLSAYIQ 2436 VK VL SG NSEF NIHVVLAGLTN+YSQY+TTFEEYQIQRYEGASTLYGPHTLSAYIQ Sbjct: 181 VKTVLTSG-NSEFDKNIHVVLAGLTNSYSQYITTFEEYQIQRYEGASTLYGPHTLSAYIQ 239 Query: 2437 EFQKLATAMIENKEVPTNIQPPDMLEKQIGLLPGVMYDSTPRGVHFGDVSSDVAANSNFR 2616 EFQKLA AMI NKEVPTN QPPDML+KQIGLLPGV++DSTP GV FGDV+SDV NS F Sbjct: 240 EFQKLAMAMIANKEVPTNFQPPDMLDKQIGLLPGVVFDSTPLGVKFGDVNSDVPGNSTFN 299 Query: 2617 KGSTVNATFYSACPRNDLLTEGTFALVEKLNG-NNWIPVYDDDDWSLQFKWSRPSKFSPR 2793 KGSTVNATFYSACPRNDLLT+GTFALVEKL+G NNW+PVYDDDDWSL+FKWSRP++ S R Sbjct: 300 KGSTVNATFYSACPRNDLLTDGTFALVEKLDGNNNWVPVYDDDDWSLRFKWSRPARLSSR 359 Query: 2794 SFATLEWTIPEDAASGVYRLRHSGASKPLIGSIKHFTGTSRAFAVR 2931 SFATLEWT+PEDAA+GVYRLRH GASKP+ GS++HFTGTSRAFAVR Sbjct: 360 SFATLEWTVPEDAAAGVYRLRHFGASKPMFGSVRHFTGTSRAFAVR 405
>AK061038:Os10g0521900 | Length = 338 Score = 37.4 bits (85), Expect = 0.065 Identities = 25/71 (35%), Positives = 32/71 (45%) Frame = -2 Query: 261 GRRAGMSRRWQWRQGRSGEDGDGQGVASKPRLGKGGPVDAWWGTTGGIGLKESAAPATGF 82 GRR G RR +WR RSG G G G G P + ++ + + AP T Sbjct: 26 GRRRGAVRRRRWRSTRSGR-GRGSGCR-----GSSRPSSSPTSSSSPLPCTSTTAPPTPL 79 Query: 81 ALFRVTGFYRR 49 A R +GF RR Sbjct: 80 AAARASGFLRR 90
>Os02g0238300:Os02g0238300 | Length = 782 Score = 32.3 bits (72), Expect = 2.1 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -2 Query: 261 GRRAGMSRRWQWRQGRSGEDGDGQGVASKPRLGKGGPVDAWWGTTGG 121 G R G+ R +W + RS G+G G+ + R +GG + G G Sbjct: 57 GGRGGVRRHQEWIRCRSAAAGNGDGIRGRQRWRRGGGAEERQGEGAG 103
>AK120506:Os05g0305600 | Length = 1153 Score = 32.0 bits (71), Expect = 2.7 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -3 Query: 2963 GIPSKALCIP*RTANAREVPVKCLIDPINGLEAPECLNL-YTPEAASSGMVHSRVAKLLG 2787 G+PS C RT N + L + ++ ECL+L Y E + + +L Sbjct: 612 GLPSTFACKALRTLNLYNTKITMLPQWVTSIDTLECLDLGYCHELMEFPKGIANLRRLAV 671 Query: 2786 LNFEGLDHLNC 2754 LN EG L C Sbjct: 672 LNLEGCSKLRC 682
>AK067489:Os05g0305600 | Length = 1153 Score = 32.0 bits (71), Expect = 2.7 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -3 Query: 2963 GIPSKALCIP*RTANAREVPVKCLIDPINGLEAPECLNL-YTPEAASSGMVHSRVAKLLG 2787 G+PS C RT N + L + ++ ECL+L Y E + + +L Sbjct: 612 GLPSTFACKALRTLNLYNTKITMLPQWVTSIDTLECLDLGYCHELMEFPKGIANLRRLAV 671 Query: 2786 LNFEGLDHLNC 2754 LN EG L C Sbjct: 672 LNLEGCSKLRC 682
>AK119314:Os06g0613400 | Length = 573 Score = 30.8 bits (68), Expect = 6.1 Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 8/149 (5%) Frame = +1 Query: 1084 VEAHNNLHPGKIYVNKG------DLIDAGVNRSPSAYLNNPAEERSKYKYNVDKE--MTL 1239 +++ N GKI N+G +++D + SP P++ + K + KE + Sbjct: 284 LKSQYNFLVGKIGQNEGSKSPVVNVVDRKTSGSP------PSKRKLKDLVDTKKENNQAV 337 Query: 1240 VKFVDDESGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWAEQNGLPKQTGVAS 1419 K VD+++GP S TH S R S S +R + +T AS Sbjct: 338 SKTVDEKNGPASSAKAQGTHHASSVR--SSFSNSRLCLPSRTTNPPPKNATSNSKTEAAS 395 Query: 1420 SDDLGSLHMTSVLPRRVSTIIPEPDEITD 1506 S SLH R+ ++ D+ D Sbjct: 396 SFTRPSLHWRETRARKEPGVVDPHDDFLD 424
>AK063321:Os01g0694900 | Length = 568 Score = 30.8 bits (68), Expect = 6.1 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = +1 Query: 2071 PGKEQVECQAPKPILLDTGEMKEPYDWAPAILPIQIIRIGQLVILCVPGEFTTMAGRRLR 2250 P E V PKP ++DTG++ D P++ I+ L I+ GE +T L+ Sbjct: 359 PSTEVVPPPPPKPEVVDTGDLLGLSDPTPSVSAIEESNALALAIIPTGGETSTSGTATLQ 418 Query: 2251 D 2253 D Sbjct: 419 D 419 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 93,964,460 Number of extensions: 2236234 Number of successful extensions: 6674 Number of sequences better than 10.0: 10 Number of HSP's gapped: 6650 Number of HSP's successfully gapped: 10 Length of query: 1043 Length of database: 15,399,855 Length adjustment: 111 Effective length of query: 932 Effective length of database: 10,955,304 Effective search space: 10210343328 Effective search space used: 10210343328 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
