ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf47b03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009374.1| Triticum aestivum clone wlm96.pk029.g10:fis, full insert mRNA sequence Length = 1635 Score = 1104 bits (557), Expect = 0.0 Identities = 788/862 (91%), Gaps = 26/862 (3%) Strand = Plus / Plus Query: 2074 taggcatatgagtcttgtagactatgagaaaacacggccagagaacccagagcgtgaggc 2133 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 taggcatatgagtct---agactatgagaaaacacggccagagaacccagagcgtgaggc 692 Query: 2134 tgaagagagcatccctgaggtcatgagaaca---cctgacgatgcaaccactagctccaa 2190 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 693 tgaagagagcatccctgaggtcatgagaacaacacctgacgatgcaaccactagctccaa 752 Query: 2191 tggtgaatcattcttatcttctgatttacatcagcctaaaacattggatcatttttggga 2250 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 753 tggtgaatcattcttctctcctgatttacatcagcctaaaacattggatcatttttggga 812 Query: 2251 gtccttcaaatcccctacagcagtaaaaattgcaagaattgtcaatgcttcagctcaagg 2310 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 gtcgttcaagtcccctacagcagtaaaaattgcaagaattgtcaatgcttcagctcaagg 872 Query: 2311 gaacaaaccaaagctcggcaagatcagcataactgataaggattccagcacttcagctcc 2370 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 873 gaacaaaccaaagctcggcaagatcagcataatagataaggattccagcacgtcagctcc 932 Query: 2371 cgctccagctaaatcttcaagaaagaacaagtggaagcccgaggaaattaagagcttaat 2430 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 933 tgctgcagctaaatcttcaagaaagaacaagtggaagcccgaggaaattaagagcttgat 992 Query: 2431 acagctgcgtggggaaatggatgagaaattccaatccgtgaaaggaagaatggttctttg 2490 |||||||||||| |||||| |||||||||||||| |||| ||||||||||||||||| || Sbjct: 993 acagctgcgtggagaaatgaatgagaaattccaaaccgtcaaaggaagaatggttctgtg 1052 Query: 2491 ggaagagatatctggtagcctgttgaagcaggggataactcgtacaccggcacagtgcaa 2550 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1053 ggaagagatatctggtagcctgttgaagcaggggataactcgtacaccagcacagtgcaa 1112 Query: 2551 atctgtgtggacatcattgcttcagaaatacgaggagagcaagaaggatggcgaaagcat 2610 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 1113 atctgtgtggacatcattgcttcagaaatacgaggagagcaagaaggatgaagaaaacat 1172 Query: 2611 gcaaacatggccttattttttagccatggatggttttttatcatgcgaaggggaaatggc 2670 ||| ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 1173 gcagacatggcaatatttttcggccatggatagttttttatcatgcgaaggggaaatggc 1232 Query: 2671 aaccaaatgaaacagacccgtaata----gcttagcgatagtaatttggagatcagcata 2726 |||||||||||||||| | |||||| ||||||||||||| ||||||||||||| || Sbjct: 1233 aaccaaatgaaacagatctgtaataaattgcttagcgatagttatttggagatcagtgta 1292 Query: 2727 ttgtaaggtagcccgtgaatcaatgacaagatcagtagcctc---aggaagtaatcgctt 2783 ||||| ||||||||||||||| | |||||||||| |||||| ||||||||||| | Sbjct: 1293 ttgta-ggtagcccgtgaatcgacgacaagatcaacagcctctccaggaagtaatcctat 1351 Query: 2784 cgtatcattctttgccattgcatgagatgcctggggtagttaagtgaaactaggtttacc 2843 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1352 cacgtcattctttgccattgcatgagatgcttggggtagttaagtgaaactaggtttacc 1411 Query: 2844 agtctaccatgttgttgtgttagtttttgt---------aactagatctaacaattgatt 2894 | || ||||||||| | ||||||||||| ||||||||||| ||||||||| Sbjct: 1412 aatccaccatgttg---tattagtttttgtgggatcagcaactagatctatcaattgatt 1468 Query: 2895 agtcagttctgttggaacatta 2916 |||||||| |||| ||||||| Sbjct: 1469 agtcagttaagttgcaacatta 1490 Score = 1021 bits (515), Expect = 0.0 Identities = 590/615 (95%) Strand = Plus / Plus Query: 1425 atcatgatgaactggaggaagttctacagattgttaaaccgcagcatttcttgcctgttc 1484 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 atcacgatgaactggaggaagttctacagattgttaaaccgcagcatttcttgcctgttc 82 Query: 1485 atggggaactcctgtttctcaaagagcatgaattgctcggaaggtcaactggcataaggc 1544 ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct: 83 atggggaactcttgtttctcaaagaacatgaattgctaggaaggtcaactggcataaagc 142 Query: 1545 acactactgtaattaaaaatggggagatgcttggtgtatctcatttaagaaacagaaagg 1604 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 143 acactactgtaattaaaaatggggagatgcttggtgtatctcatctaagaaacagaaagg 202 Query: 1605 ttttgtcaaatgggtttatttctttagggaagcaggactttaagctaatgtatagtgatg 1664 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 203 ttttgtcaaatgggtttgtttctttagggaagcaggactttaagctaatgtatagtgacg 262 Query: 1665 gagacaaagcttttggaacatctactgatctctgcattgatgaaagattcaggattgcat 1724 ||||||||||||||||||| || |||||||||||||| ||||| ||||||||||| |||| Sbjct: 263 gagacaaagcttttggaacgtccactgatctctgcatcgatgagagattcaggatcgcat 322 Query: 1725 ctgatggcattatctttgtcagcatggagatcttccgacctgaacctgcttcaccagagt 1784 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 323 ctgatggcattatctttgtcagcatggagatcttccgacctaaacctgcttcaccacagt 382 Query: 1785 caggcttgaaagggaaatttaaaataactacacggtgtctatggcttgataatgggagac 1844 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 383 ctggcttgaaagggaaatttaaaataacaacacggtgtctatggcttgataatgggaggc 442 Query: 1845 tactcgacgcactttacaaggctgcacatgctgcattgtcaagctgtcctttgaattgcc 1904 |||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 443 tacttgatgcactttacaaggctgcgcatgcagcattgtcaagctgtcctttgaattgcc 502 Query: 1905 cacttagtcacatggagcggatggtatctgaaatcttgaggaaaatggtcagaaagtaca 1964 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 503 cacttagtcacatggagcgaatggtatctgaaatcttgaggaaaatggttagaaagtaca 562 Query: 1965 gtggaaagagacctgacgtcattgtagttgcttcagagaacactacagtaggtttcacag 2024 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 563 gtggaaagagacctgacgtcattgtagttgcttcagagaacactacagtaggtttctcag 622 Query: 2025 aagaggtaataaata 2039 ||||||||||||||| Sbjct: 623 aagaggtaataaata 637
>ref|NM_001053593.1| Oryza sativa (japonica cultivar-group) Os02g0539600 (Os02g0539600) mRNA, complete cds Length = 1335 Score = 389 bits (196), Expect = e-104 Identities = 439/520 (84%) Strand = Plus / Plus Query: 2161 aacacctgacgatgcaaccactagctccaatggtgaatcattcttatcttctgatttaca 2220 ||||| ||| ||||||||||| ||||||||||| ||| |||| || || || ||||| || Sbjct: 476 aacacgtgatgatgcaaccacaagctccaatggcgaagcatttttctcctcagatttgca 535 Query: 2221 tcagcctaaaacattggatcatttttgggagtccttcaaatcccctacagcagtaaaaat 2280 | ||||||||||| | || ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 536 taagcctaaaacactagagcatttttgggactcattcaaatcccctacagctgtaaaaat 595 Query: 2281 tgcaagaattgtcaatgcttcagctcaagggaacaaaccaaagctcggcaagatcagcat 2340 ||||||||||||||||| |||||||||||||| ||| ||||| | |||||||||||||| Sbjct: 596 tgcaagaattgtcaatggttcagctcaagggagtaaatcaaagattggcaagatcagcat 655 Query: 2341 aactgataaggattccagcacttcagctcccgctccagctaaatcttcaagaaagaacaa 2400 | | |||||| || ||| | | || | ||||||| ||||||||||| ||||||||| Sbjct: 656 agtgggtaaggactctagcgatccttcttctgctccagttaaatcttcaaaaaagaacaa 715 Query: 2401 gtggaagcccgaggaaattaagagcttaatacagctgcgtggggaaatggatgagaaatt 2460 ||||||||| |||||||||||||||||||| ||| ||||||| |||||| ||||| |||| Sbjct: 716 gtggaagcctgaggaaattaagagcttaattcagatgcgtggcgaaatgaatgagcaatt 775 Query: 2461 ccaatccgtgaaaggaagaatggttctttgggaagagatatctggtagcctgttgaagca 2520 || | |||||||| ||||||||||| ||||||||||||||| |||| |||||| || Sbjct: 776 tcagactgtgaaagggagaatggttctgtgggaagagatatcttctagcatgttgagcca 835 Query: 2521 ggggataactcgtacaccggcacagtgcaaatctgtgtggacatcattgcttcagaaata 2580 |||||||| ||||||||| ||||||||||| ||| | |||||||||||| |||||||||| Sbjct: 836 ggggataagtcgtacaccagcacagtgcaagtctctatggacatcattggttcagaaata 895 Query: 2581 cgaggagagcaagaaggatggcgaaagcatgcaaacatggccttattttttagccatgga 2640 |||||||||||||| |||| |||||| | | || ||||| ||||| || | |||||| Sbjct: 896 tgaggagagcaagaaagatgaggaaagcgtaaagacgtggccgtatttcttggacatgga 955 Query: 2641 tggttttttatcatgcgaaggggaaatggcaaccaaatga 2680 | |||||||| || ||||||||||||||||| ||||| Sbjct: 956 cagggttttatcaagccaaggggaaatggcaacccaatga 995 Score = 281 bits (142), Expect = 7e-72 Identities = 264/305 (86%), Gaps = 6/305 (1%) Strand = Plus / Plus Query: 1715 aggattgcatctgatggcattatctttgtcagcatggagatcttccgacct------gaa 1768 |||||||||||||||||| |||| |||||||||||||| |||||||||||| ||| Sbjct: 3 aggattgcatctgatggcgttatttttgtcagcatggaaatcttccgacctcagaaggaa 62 Query: 1769 cctgcttcaccagagtcaggcttgaaagggaaatttaaaataactacacggtgtctatgg 1828 | ||||||| || ||||||| ||||||||||| || |||||||| ||| | || |||||| Sbjct: 63 cttgcttcatcacagtcaggattgaaagggaagttcaaaataacaacaagatgcctatgg 122 Query: 1829 cttgataatgggagactactcgacgcactttacaaggctgcacatgctgcattgtcaagc 1888 ||||||||||| |||||| | || ||||||||||| |||||| |||||||||| ||||| Sbjct: 123 cttgataatggaagactattagatgcactttacaaagctgcatatgctgcattatcaagt 182 Query: 1889 tgtcctttgaattgcccacttagtcacatggagcggatggtatctgaaatcttgaggaaa 1948 ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 183 tgtccagtgaattgtccacttagtcacatggagaggatggtatctgaaatcttgaggaaa 242 Query: 1949 atggtcagaaagtacagtggaaagagacctgacgtcattgtagttgcttcagagaacact 2008 ||||| || ||||| ||||| ||||| ||||| ||||||| |||||| |||||||||| Sbjct: 243 atggtaaggaagtatagtgggaagaggcctgatgtcattgcggttgctacagagaacaca 302 Query: 2009 acagt 2013 ||||| Sbjct: 303 acagt 307
>dbj|AK059666.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F01, full insert sequence Length = 1335 Score = 389 bits (196), Expect = e-104 Identities = 439/520 (84%) Strand = Plus / Plus Query: 2161 aacacctgacgatgcaaccactagctccaatggtgaatcattcttatcttctgatttaca 2220 ||||| ||| ||||||||||| ||||||||||| ||| |||| || || || ||||| || Sbjct: 476 aacacgtgatgatgcaaccacaagctccaatggcgaagcatttttctcctcagatttgca 535 Query: 2221 tcagcctaaaacattggatcatttttgggagtccttcaaatcccctacagcagtaaaaat 2280 | ||||||||||| | || ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 536 taagcctaaaacactagagcatttttgggactcattcaaatcccctacagctgtaaaaat 595 Query: 2281 tgcaagaattgtcaatgcttcagctcaagggaacaaaccaaagctcggcaagatcagcat 2340 ||||||||||||||||| |||||||||||||| ||| ||||| | |||||||||||||| Sbjct: 596 tgcaagaattgtcaatggttcagctcaagggagtaaatcaaagattggcaagatcagcat 655 Query: 2341 aactgataaggattccagcacttcagctcccgctccagctaaatcttcaagaaagaacaa 2400 | | |||||| || ||| | | || | ||||||| ||||||||||| ||||||||| Sbjct: 656 agtgggtaaggactctagcgatccttcttctgctccagttaaatcttcaaaaaagaacaa 715 Query: 2401 gtggaagcccgaggaaattaagagcttaatacagctgcgtggggaaatggatgagaaatt 2460 ||||||||| |||||||||||||||||||| ||| ||||||| |||||| ||||| |||| Sbjct: 716 gtggaagcctgaggaaattaagagcttaattcagatgcgtggcgaaatgaatgagcaatt 775 Query: 2461 ccaatccgtgaaaggaagaatggttctttgggaagagatatctggtagcctgttgaagca 2520 || | |||||||| ||||||||||| ||||||||||||||| |||| |||||| || Sbjct: 776 tcagactgtgaaagggagaatggttctgtgggaagagatatcttctagcatgttgagcca 835 Query: 2521 ggggataactcgtacaccggcacagtgcaaatctgtgtggacatcattgcttcagaaata 2580 |||||||| ||||||||| ||||||||||| ||| | |||||||||||| |||||||||| Sbjct: 836 ggggataagtcgtacaccagcacagtgcaagtctctatggacatcattggttcagaaata 895 Query: 2581 cgaggagagcaagaaggatggcgaaagcatgcaaacatggccttattttttagccatgga 2640 |||||||||||||| |||| |||||| | | || ||||| ||||| || | |||||| Sbjct: 896 tgaggagagcaagaaagatgaggaaagcgtaaagacgtggccgtatttcttggacatgga 955 Query: 2641 tggttttttatcatgcgaaggggaaatggcaaccaaatga 2680 | |||||||| || ||||||||||||||||| ||||| Sbjct: 956 cagggttttatcaagccaaggggaaatggcaacccaatga 995 Score = 281 bits (142), Expect = 7e-72 Identities = 264/305 (86%), Gaps = 6/305 (1%) Strand = Plus / Plus Query: 1715 aggattgcatctgatggcattatctttgtcagcatggagatcttccgacct------gaa 1768 |||||||||||||||||| |||| |||||||||||||| |||||||||||| ||| Sbjct: 3 aggattgcatctgatggcgttatttttgtcagcatggaaatcttccgacctcagaaggaa 62 Query: 1769 cctgcttcaccagagtcaggcttgaaagggaaatttaaaataactacacggtgtctatgg 1828 | ||||||| || ||||||| ||||||||||| || |||||||| ||| | || |||||| Sbjct: 63 cttgcttcatcacagtcaggattgaaagggaagttcaaaataacaacaagatgcctatgg 122 Query: 1829 cttgataatgggagactactcgacgcactttacaaggctgcacatgctgcattgtcaagc 1888 ||||||||||| |||||| | || ||||||||||| |||||| |||||||||| ||||| Sbjct: 123 cttgataatggaagactattagatgcactttacaaagctgcatatgctgcattatcaagt 182 Query: 1889 tgtcctttgaattgcccacttagtcacatggagcggatggtatctgaaatcttgaggaaa 1948 ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 183 tgtccagtgaattgtccacttagtcacatggagaggatggtatctgaaatcttgaggaaa 242 Query: 1949 atggtcagaaagtacagtggaaagagacctgacgtcattgtagttgcttcagagaacact 2008 ||||| || ||||| ||||| ||||| ||||| ||||||| |||||| |||||||||| Sbjct: 243 atggtaaggaagtatagtgggaagaggcctgatgtcattgcggttgctacagagaacaca 302 Query: 2009 acagt 2013 ||||| Sbjct: 303 acagt 307
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 351 bits (177), Expect = 9e-93 Identities = 363/425 (85%) Strand = Plus / Plus Query: 2161 aacacctgacgatgcaaccactagctccaatggtgaatcattcttatcttctgatttaca 2220 ||||| ||| ||||||||||| ||||||||||| ||| |||| || || || ||||| || Sbjct: 20032050 aacacgtgatgatgcaaccacaagctccaatggcgaagcatttttctcctcagatttgca 20032109 Query: 2221 tcagcctaaaacattggatcatttttgggagtccttcaaatcccctacagcagtaaaaat 2280 | ||||||||||| | || ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 20032110 taagcctaaaacactagagcatttttgggactcattcaaatcccctacagctgtaaaaat 20032169 Query: 2281 tgcaagaattgtcaatgcttcagctcaagggaacaaaccaaagctcggcaagatcagcat 2340 ||||||||||||||||| |||||||||||||| ||| ||||| | |||||||||||||| Sbjct: 20032170 tgcaagaattgtcaatggttcagctcaagggagtaaatcaaagattggcaagatcagcat 20032229 Query: 2341 aactgataaggattccagcacttcagctcccgctccagctaaatcttcaagaaagaacaa 2400 | | |||||| || ||| | | || | ||||||| ||||||||||| ||||||||| Sbjct: 20032230 agtgggtaaggactctagcgatccttcttctgctccagttaaatcttcaaaaaagaacaa 20032289 Query: 2401 gtggaagcccgaggaaattaagagcttaatacagctgcgtggggaaatggatgagaaatt 2460 ||||||||| |||||||||||||||||||| ||| ||||||| |||||| ||||| |||| Sbjct: 20032290 gtggaagcctgaggaaattaagagcttaattcagatgcgtggcgaaatgaatgagcaatt 20032349 Query: 2461 ccaatccgtgaaaggaagaatggttctttgggaagagatatctggtagcctgttgaagca 2520 || | |||||||| ||||||||||| ||||||||||||||| |||| |||||| || Sbjct: 20032350 tcagactgtgaaagggagaatggttctgtgggaagagatatcttctagcatgttgagcca 20032409 Query: 2521 ggggataactcgtacaccggcacagtgcaaatctgtgtggacatcattgcttcagaaata 2580 |||||||| ||||||||| ||||||||||| ||| | |||||||||||| |||||||||| Sbjct: 20032410 ggggataagtcgtacaccagcacagtgcaagtctctatggacatcattggttcagaaata 20032469 Query: 2581 cgagg 2585 |||| Sbjct: 20032470 tgagg 20032474 Score = 240 bits (121), Expect = 2e-59 Identities = 237/276 (85%), Gaps = 6/276 (2%) Strand = Plus / Plus Query: 1744 cagcatggagatcttccgacct------gaacctgcttcaccagagtcaggcttgaaagg 1797 ||||||||| |||||||||||| |||| ||||||| || ||||||| |||||||| Sbjct: 20031413 cagcatggaaatcttccgacctcagaaggaacttgcttcatcacagtcaggattgaaagg 20031472 Query: 1798 gaaatttaaaataactacacggtgtctatggcttgataatgggagactactcgacgcact 1857 ||| || |||||||| ||| | || ||||||||||||||||| |||||| | || ||||| Sbjct: 20031473 gaagttcaaaataacaacaagatgcctatggcttgataatggaagactattagatgcact 20031532 Query: 1858 ttacaaggctgcacatgctgcattgtcaagctgtcctttgaattgcccacttagtcacat 1917 |||||| |||||| |||||||||| ||||| ||||| ||||||| |||||||||||||| Sbjct: 20031533 ttacaaagctgcatatgctgcattatcaagttgtccagtgaattgtccacttagtcacat 20031592 Query: 1918 ggagcggatggtatctgaaatcttgaggaaaatggtcagaaagtacagtggaaagagacc 1977 |||| ||||||||||||||||||||||||||||||| || ||||| ||||| ||||| || Sbjct: 20031593 ggagaggatggtatctgaaatcttgaggaaaatggtaaggaagtatagtgggaagaggcc 20031652 Query: 1978 tgacgtcattgtagttgcttcagagaacactacagt 2013 ||| ||||||| |||||| |||||||||| ||||| Sbjct: 20031653 tgatgtcattgcggttgctacagagaacacaacagt 20031688 Score = 218 bits (110), Expect = 9e-53 Identities = 173/194 (89%) Strand = Plus / Plus Query: 615 agctcataaaaaagcgtttgaaggagtttgggatttttctctcatccaggcttaagagtt 674 |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||| || Sbjct: 20027611 agctaataaagaggcgtttgaaggagtttggaatttttctctcgtccaggcttaaggttt 20027670 Query: 675 ttagagttagaaatagatttcaggctggtccatttgaagtggaacctatccgtgtaactc 734 ||||||| || || |||||||||||||| |||||||| ||||| || |||||||||||| Sbjct: 20027671 ttagagtaaggaagagatttcaggctgggccatttgaggtggagcccctccgtgtaactc 20027730 Query: 735 attcaattccagactgctgtggattagtacttcgttgtggtgatggcacaattttccata 794 |||||||||| ||||||||||| ||||| |||||||||| |||||||| ||||||||||| Sbjct: 20027731 attcaattccggactgctgtggcttagtgcttcgttgtgctgatggcataattttccata 20027790 Query: 795 ccggtgactggaaa 808 | |||||||||||| Sbjct: 20027791 ctggtgactggaaa 20027804 Score = 212 bits (107), Expect = 5e-51 Identities = 169/189 (89%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 886 gatgatgagtgactctacaaatattctgtcccctggaagatccaccagtgaatctgttgt 945 |||||||||||| ||||||||| |||| ||||||||||| |||| ||| ||||||||||| Sbjct: 20028436 gatgatgagtgattctacaaatgttctatcccctggaaggtccatcagcgaatctgttgt 20028495 Query: 946 cgctagttcattgttacgtcatgtttcagaagcaaaagggagaagagtaattacaacaca 1005 ||| |||||||||| || ||| |||||||||||||||| |||||||||||| ||||| Sbjct: 20028496 tgctggttcattgttgcgacatatttcagaagcaaaagg---aagagtaattaccacaca 20028552 Query: 1006 atttgcttcaaatatacatcgcattgggagcatcaaagccgctgcagacttaactggtcg 1065 |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 20028553 gtttgcttccaatatacatcgtattgggagcatcaaagctgctgcagacttaactggtcg 20028612 Query: 1066 aaggctggt 1074 || |||||| Sbjct: 20028613 aaagctggt 20028621 Score = 196 bits (99), Expect = 3e-46 Identities = 195/227 (85%) Strand = Plus / Plus Query: 209 tctcacgaatccagaataccccgtagaaggttccgaagaaccgagggtgctactaagagc 268 ||||| |||||||||| || ||||||||| | | | ||| |||||||| || |||||| Sbjct: 20026359 tctcaagaatccagaactccacgtagaagggtgaggaaaactgagggtgccaccaagagc 20026418 Query: 269 atggaagattcagtcaagcgaaagatggagcagttctacgagggggtggatggtccgccc 328 |||||||||||||||||||||||||||||||||| || || || |||||||||| || Sbjct: 20026419 ctggaagattcagtcaagcgaaagatggagcagttttatgaaggattggatggtccacct 20026478 Query: 329 ctccgggtcctcccaatcggcggccttggggaaatcggcatgaattgcatgctcgtcggg 388 ||||| ||||| ||||| || |||||||| |||||||||||||||||||||||||| ||| Sbjct: 20026479 ctccgagtccttccaataggtggccttggagaaatcggcatgaattgcatgctcgtaggg 20026538 Query: 389 aactatgaccgttatattctgattgatgcaggggttatgttcccaga 435 |||||||||||||| || |||| ||||||||||| ||||| ||||| Sbjct: 20026539 aactatgaccgttacatattgatagatgcaggggtcatgtttccaga 20026585 Score = 149 bits (75), Expect = 7e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 1438 ggaggaagttctacagattgttaaaccgcagcatttcttgcctgttcatggggaactcct 1497 ||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 20030394 ggaggaagtcctacagattgtcaaaccacagcatttcttgcctgttcatggagaactcct 20030453 Query: 1498 gtttctcaaagagcatgaattgctcggaaggtcaactggcataaggcacactactgtaa 1556 |||||| ||||| |||||||| || ||||| || ||||||||||||||||| ||||||| Sbjct: 20030454 gtttcttaaagaacatgaattacttggaagatctactggcataaggcacaccactgtaa 20030512 Score = 143 bits (72), Expect = 4e-30 Identities = 93/100 (93%) Strand = Plus / Plus Query: 1647 agctaatgtatagtgatggagacaaagcttttggaacatctactgatctctgcattgatg 1706 ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||| Sbjct: 20031157 agctaatgtatagtgatggcgataaagcttttggaacatccactgatctctgcattgatg 20031216 Query: 1707 aaagattcaggattgcatctgatggcattatctttgtcag 1746 | ||||| |||||||||||||||||| |||| |||||||| Sbjct: 20031217 agagattaaggattgcatctgatggcgttatttttgtcag 20031256 Score = 141 bits (71), Expect = 2e-29 Identities = 107/119 (89%) Strand = Plus / Plus Query: 443 gagtttggtgtgcaaaagattattcctgacacaactttcatcaagaaatggagccacaag 502 ||||| ||||||||||||||||| || |||||||| ||||||||||||||||| ||||| Sbjct: 20026916 gagttcggtgtgcaaaagattatcccagacacaacattcatcaagaaatggagtcacaaa 20026975 Query: 503 attgaagcagttattattacacatggccatgaagatcacattggtgcgttgccttgggt 561 || ||||| |||||||| || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 20026976 atcgaagctgttattataacgcatggccatgaagatcacatcggtgcgttgccctgggt 20027034 Score = 115 bits (58), Expect = 9e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 1217 caggcagagccacgtgcggctctgaatctcgcatcttatgggggaagccatgctcttaaa 1276 ||||||||||||||||| ||||| ||||| ||||||| ||| ||||| ||||| |||||| Sbjct: 20029588 caggcagagccacgtgcagctctaaatcttgcatcttttggaggaagtcatgcccttaaa 20029647 Query: 1277 ctatccaaagaggacgtccttctttattcagctaaggt 1314 |||||||||||||| |||||||| ||||| |||||||| Sbjct: 20029648 ctatccaaagaggatgtccttctgtattctgctaaggt 20029685 Score = 109 bits (55), Expect = 6e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 1311 aggttattcctggaaacgaatccagggtaatgaagatgttaaatcgcctcaccgaccttg 1370 ||||||| |||||||| || || | ||||||||||||||||||||||| || || |||| Sbjct: 20030104 aggttatccctggaaatgagtcacgtgtaatgaagatgttaaatcgccttactgagcttg 20030163 Query: 1371 gccccaaaattgttatgggtaaagatgccggcctccatacctctgggcatgcttatcatg 1430 | || |||||||| ||||| || ||||| || |||||||||||||||||||| ||||| | Sbjct: 20030164 gtccaaaaattgtgatgggaaaggatgctggtctccatacctctgggcatgcctatcacg 20030223 Query: 1431 atgaact 1437 ||||||| Sbjct: 20030224 atgaact 20030230 Score = 103 bits (52), Expect = 4e-18 Identities = 73/80 (91%) Strand = Plus / Plus Query: 1076 tttgttggaatgtcactgaggacataccttgaggctgctttcagggatggaaaggcacca 1135 ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||| Sbjct: 20028718 tttgttggaatgtcactcaggacttaccttgatgctgctttcagggatggaaagtcaccg 20028777 Query: 1136 ctggatccatcaaccttggt 1155 | ||||||||||||||||| Sbjct: 20028778 attgatccatcaaccttggt 20028797 Score = 91.7 bits (46), Expect = 1e-14 Identities = 67/74 (90%) Strand = Plus / Plus Query: 809 attgatgaatcaccagtggatggaaaaatattcgaccgacaagcattggaggagctctcg 868 ||||| |||||||||||||||||||||||||| || || ||||||||||| |||||||| Sbjct: 20027882 attgacgaatcaccagtggatggaaaaatatttgatcggcaagcattggaagagctctcc 20027941 Query: 869 aaagaaggtgttac 882 |||||||| ||||| Sbjct: 20027942 aaagaaggcgttac 20027955 Score = 87.7 bits (44), Expect = 2e-13 Identities = 74/84 (88%) Strand = Plus / Plus Query: 1553 gtaattaaaaatggggagatgcttggtgtatctcatttaagaaacagaaaggttttgtca 1612 |||||||||||||| ||||||||||| || || |||||||||||||||| |||||||| Sbjct: 20030973 gtaattaaaaatggagagatgcttggcgtgtcacatttaagaaacagaagagttttgtct 20031032 Query: 1613 aatgggtttatttctttagggaag 1636 ||||||||| || | ||||||||| Sbjct: 20031033 aatgggtttgttgcattagggaag 20031056 Score = 67.9 bits (34), Expect = 2e-07 Identities = 58/66 (87%) Strand = Plus / Plus Query: 1153 ggttaaggcagaggacatggatgcatatgaccctaaaaatcttttagtcgttactacagg 1212 |||||||| ||||||||||||||| |||| ||| || ||||| |||| ||||||||||| Sbjct: 20029447 ggttaaggtagaggacatggatgcctatgccccaaatgatcttctagttgttactacagg 20029506 Query: 1213 ttcaca 1218 |||||| Sbjct: 20029507 ttcaca 20029512 Score = 48.1 bits (24), Expect = 0.18 Identities = 39/44 (88%) Strand = Plus / Plus Query: 573 tggattcgaccacacctatttttgcatcatcttttacgatggag 616 ||||||| | |||||| ||||| |||||||||||||| |||||| Sbjct: 20027454 tggattcaagcacaccgattttcgcatcatcttttaccatggag 20027497 Score = 46.1 bits (23), Expect = 0.72 Identities = 26/27 (96%) Strand = Plus / Plus Query: 88 cgccatggtcgcgctcgcctccctctc 114 ||||||||| ||||||||||||||||| Sbjct: 20025410 cgccatggtggcgctcgcctccctctc 20025436 Score = 46.1 bits (23), Expect = 0.72 Identities = 32/35 (91%) Strand = Plus / Plus Query: 2646 ttttatcatgcgaaggggaaatggcaaccaaatga 2680 |||||||| || ||||||||||||||||| ||||| Sbjct: 20032871 ttttatcaagccaaggggaaatggcaacccaatga 20032905
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 351 bits (177), Expect = 9e-93 Identities = 363/425 (85%) Strand = Plus / Plus Query: 2161 aacacctgacgatgcaaccactagctccaatggtgaatcattcttatcttctgatttaca 2220 ||||| ||| ||||||||||| ||||||||||| ||| |||| || || || ||||| || Sbjct: 136171 aacacgtgatgatgcaaccacaagctccaatggcgaagcatttttctcctcagatttgca 136230 Query: 2221 tcagcctaaaacattggatcatttttgggagtccttcaaatcccctacagcagtaaaaat 2280 | ||||||||||| | || ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 136231 taagcctaaaacactagagcatttttgggactcattcaaatcccctacagctgtaaaaat 136290 Query: 2281 tgcaagaattgtcaatgcttcagctcaagggaacaaaccaaagctcggcaagatcagcat 2340 ||||||||||||||||| |||||||||||||| ||| ||||| | |||||||||||||| Sbjct: 136291 tgcaagaattgtcaatggttcagctcaagggagtaaatcaaagattggcaagatcagcat 136350 Query: 2341 aactgataaggattccagcacttcagctcccgctccagctaaatcttcaagaaagaacaa 2400 | | |||||| || ||| | | || | ||||||| ||||||||||| ||||||||| Sbjct: 136351 agtgggtaaggactctagcgatccttcttctgctccagttaaatcttcaaaaaagaacaa 136410 Query: 2401 gtggaagcccgaggaaattaagagcttaatacagctgcgtggggaaatggatgagaaatt 2460 ||||||||| |||||||||||||||||||| ||| ||||||| |||||| ||||| |||| Sbjct: 136411 gtggaagcctgaggaaattaagagcttaattcagatgcgtggcgaaatgaatgagcaatt 136470 Query: 2461 ccaatccgtgaaaggaagaatggttctttgggaagagatatctggtagcctgttgaagca 2520 || | |||||||| ||||||||||| ||||||||||||||| |||| |||||| || Sbjct: 136471 tcagactgtgaaagggagaatggttctgtgggaagagatatcttctagcatgttgagcca 136530 Query: 2521 ggggataactcgtacaccggcacagtgcaaatctgtgtggacatcattgcttcagaaata 2580 |||||||| ||||||||| ||||||||||| ||| | |||||||||||| |||||||||| Sbjct: 136531 ggggataagtcgtacaccagcacagtgcaagtctctatggacatcattggttcagaaata 136590 Query: 2581 cgagg 2585 |||| Sbjct: 136591 tgagg 136595 Score = 240 bits (121), Expect = 2e-59 Identities = 237/276 (85%), Gaps = 6/276 (2%) Strand = Plus / Plus Query: 1744 cagcatggagatcttccgacct------gaacctgcttcaccagagtcaggcttgaaagg 1797 ||||||||| |||||||||||| |||| ||||||| || ||||||| |||||||| Sbjct: 135534 cagcatggaaatcttccgacctcagaaggaacttgcttcatcacagtcaggattgaaagg 135593 Query: 1798 gaaatttaaaataactacacggtgtctatggcttgataatgggagactactcgacgcact 1857 ||| || |||||||| ||| | || ||||||||||||||||| |||||| | || ||||| Sbjct: 135594 gaagttcaaaataacaacaagatgcctatggcttgataatggaagactattagatgcact 135653 Query: 1858 ttacaaggctgcacatgctgcattgtcaagctgtcctttgaattgcccacttagtcacat 1917 |||||| |||||| |||||||||| ||||| ||||| ||||||| |||||||||||||| Sbjct: 135654 ttacaaagctgcatatgctgcattatcaagttgtccagtgaattgtccacttagtcacat 135713 Query: 1918 ggagcggatggtatctgaaatcttgaggaaaatggtcagaaagtacagtggaaagagacc 1977 |||| ||||||||||||||||||||||||||||||| || ||||| ||||| ||||| || Sbjct: 135714 ggagaggatggtatctgaaatcttgaggaaaatggtaaggaagtatagtgggaagaggcc 135773 Query: 1978 tgacgtcattgtagttgcttcagagaacactacagt 2013 ||| ||||||| |||||| |||||||||| ||||| Sbjct: 135774 tgatgtcattgcggttgctacagagaacacaacagt 135809 Score = 218 bits (110), Expect = 9e-53 Identities = 173/194 (89%) Strand = Plus / Plus Query: 615 agctcataaaaaagcgtttgaaggagtttgggatttttctctcatccaggcttaagagtt 674 |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||| || Sbjct: 131732 agctaataaagaggcgtttgaaggagtttggaatttttctctcgtccaggcttaaggttt 131791 Query: 675 ttagagttagaaatagatttcaggctggtccatttgaagtggaacctatccgtgtaactc 734 ||||||| || || |||||||||||||| |||||||| ||||| || |||||||||||| Sbjct: 131792 ttagagtaaggaagagatttcaggctgggccatttgaggtggagcccctccgtgtaactc 131851 Query: 735 attcaattccagactgctgtggattagtacttcgttgtggtgatggcacaattttccata 794 |||||||||| ||||||||||| ||||| |||||||||| |||||||| ||||||||||| Sbjct: 131852 attcaattccggactgctgtggcttagtgcttcgttgtgctgatggcataattttccata 131911 Query: 795 ccggtgactggaaa 808 | |||||||||||| Sbjct: 131912 ctggtgactggaaa 131925 Score = 212 bits (107), Expect = 5e-51 Identities = 169/189 (89%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 886 gatgatgagtgactctacaaatattctgtcccctggaagatccaccagtgaatctgttgt 945 |||||||||||| ||||||||| |||| ||||||||||| |||| ||| ||||||||||| Sbjct: 132557 gatgatgagtgattctacaaatgttctatcccctggaaggtccatcagcgaatctgttgt 132616 Query: 946 cgctagttcattgttacgtcatgtttcagaagcaaaagggagaagagtaattacaacaca 1005 ||| |||||||||| || ||| |||||||||||||||| |||||||||||| ||||| Sbjct: 132617 tgctggttcattgttgcgacatatttcagaagcaaaagg---aagagtaattaccacaca 132673 Query: 1006 atttgcttcaaatatacatcgcattgggagcatcaaagccgctgcagacttaactggtcg 1065 |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 132674 gtttgcttccaatatacatcgtattgggagcatcaaagctgctgcagacttaactggtcg 132733 Query: 1066 aaggctggt 1074 || |||||| Sbjct: 132734 aaagctggt 132742 Score = 196 bits (99), Expect = 3e-46 Identities = 195/227 (85%) Strand = Plus / Plus Query: 209 tctcacgaatccagaataccccgtagaaggttccgaagaaccgagggtgctactaagagc 268 ||||| |||||||||| || ||||||||| | | | ||| |||||||| || |||||| Sbjct: 130480 tctcaagaatccagaactccacgtagaagggtgaggaaaactgagggtgccaccaagagc 130539 Query: 269 atggaagattcagtcaagcgaaagatggagcagttctacgagggggtggatggtccgccc 328 |||||||||||||||||||||||||||||||||| || || || |||||||||| || Sbjct: 130540 ctggaagattcagtcaagcgaaagatggagcagttttatgaaggattggatggtccacct 130599 Query: 329 ctccgggtcctcccaatcggcggccttggggaaatcggcatgaattgcatgctcgtcggg 388 ||||| ||||| ||||| || |||||||| |||||||||||||||||||||||||| ||| Sbjct: 130600 ctccgagtccttccaataggtggccttggagaaatcggcatgaattgcatgctcgtaggg 130659 Query: 389 aactatgaccgttatattctgattgatgcaggggttatgttcccaga 435 |||||||||||||| || |||| ||||||||||| ||||| ||||| Sbjct: 130660 aactatgaccgttacatattgatagatgcaggggtcatgtttccaga 130706 Score = 149 bits (75), Expect = 7e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 1438 ggaggaagttctacagattgttaaaccgcagcatttcttgcctgttcatggggaactcct 1497 ||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 134515 ggaggaagtcctacagattgtcaaaccacagcatttcttgcctgttcatggagaactcct 134574 Query: 1498 gtttctcaaagagcatgaattgctcggaaggtcaactggcataaggcacactactgtaa 1556 |||||| ||||| |||||||| || ||||| || ||||||||||||||||| ||||||| Sbjct: 134575 gtttcttaaagaacatgaattacttggaagatctactggcataaggcacaccactgtaa 134633 Score = 143 bits (72), Expect = 4e-30 Identities = 93/100 (93%) Strand = Plus / Plus Query: 1647 agctaatgtatagtgatggagacaaagcttttggaacatctactgatctctgcattgatg 1706 ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||| Sbjct: 135278 agctaatgtatagtgatggcgataaagcttttggaacatccactgatctctgcattgatg 135337 Query: 1707 aaagattcaggattgcatctgatggcattatctttgtcag 1746 | ||||| |||||||||||||||||| |||| |||||||| Sbjct: 135338 agagattaaggattgcatctgatggcgttatttttgtcag 135377 Score = 141 bits (71), Expect = 2e-29 Identities = 107/119 (89%) Strand = Plus / Plus Query: 443 gagtttggtgtgcaaaagattattcctgacacaactttcatcaagaaatggagccacaag 502 ||||| ||||||||||||||||| || |||||||| ||||||||||||||||| ||||| Sbjct: 131037 gagttcggtgtgcaaaagattatcccagacacaacattcatcaagaaatggagtcacaaa 131096 Query: 503 attgaagcagttattattacacatggccatgaagatcacattggtgcgttgccttgggt 561 || ||||| |||||||| || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 131097 atcgaagctgttattataacgcatggccatgaagatcacatcggtgcgttgccctgggt 131155 Score = 115 bits (58), Expect = 9e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 1217 caggcagagccacgtgcggctctgaatctcgcatcttatgggggaagccatgctcttaaa 1276 ||||||||||||||||| ||||| ||||| ||||||| ||| ||||| ||||| |||||| Sbjct: 133709 caggcagagccacgtgcagctctaaatcttgcatcttttggaggaagtcatgcccttaaa 133768 Query: 1277 ctatccaaagaggacgtccttctttattcagctaaggt 1314 |||||||||||||| |||||||| ||||| |||||||| Sbjct: 133769 ctatccaaagaggatgtccttctgtattctgctaaggt 133806 Score = 109 bits (55), Expect = 6e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 1311 aggttattcctggaaacgaatccagggtaatgaagatgttaaatcgcctcaccgaccttg 1370 ||||||| |||||||| || || | ||||||||||||||||||||||| || || |||| Sbjct: 134225 aggttatccctggaaatgagtcacgtgtaatgaagatgttaaatcgccttactgagcttg 134284 Query: 1371 gccccaaaattgttatgggtaaagatgccggcctccatacctctgggcatgcttatcatg 1430 | || |||||||| ||||| || ||||| || |||||||||||||||||||| ||||| | Sbjct: 134285 gtccaaaaattgtgatgggaaaggatgctggtctccatacctctgggcatgcctatcacg 134344 Query: 1431 atgaact 1437 ||||||| Sbjct: 134345 atgaact 134351 Score = 103 bits (52), Expect = 4e-18 Identities = 73/80 (91%) Strand = Plus / Plus Query: 1076 tttgttggaatgtcactgaggacataccttgaggctgctttcagggatggaaaggcacca 1135 ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||| Sbjct: 132839 tttgttggaatgtcactcaggacttaccttgatgctgctttcagggatggaaagtcaccg 132898 Query: 1136 ctggatccatcaaccttggt 1155 | ||||||||||||||||| Sbjct: 132899 attgatccatcaaccttggt 132918 Score = 91.7 bits (46), Expect = 1e-14 Identities = 67/74 (90%) Strand = Plus / Plus Query: 809 attgatgaatcaccagtggatggaaaaatattcgaccgacaagcattggaggagctctcg 868 ||||| |||||||||||||||||||||||||| || || ||||||||||| |||||||| Sbjct: 132003 attgacgaatcaccagtggatggaaaaatatttgatcggcaagcattggaagagctctcc 132062 Query: 869 aaagaaggtgttac 882 |||||||| ||||| Sbjct: 132063 aaagaaggcgttac 132076 Score = 87.7 bits (44), Expect = 2e-13 Identities = 74/84 (88%) Strand = Plus / Plus Query: 1553 gtaattaaaaatggggagatgcttggtgtatctcatttaagaaacagaaaggttttgtca 1612 |||||||||||||| ||||||||||| || || |||||||||||||||| |||||||| Sbjct: 135094 gtaattaaaaatggagagatgcttggcgtgtcacatttaagaaacagaagagttttgtct 135153 Query: 1613 aatgggtttatttctttagggaag 1636 ||||||||| || | ||||||||| Sbjct: 135154 aatgggtttgttgcattagggaag 135177 Score = 67.9 bits (34), Expect = 2e-07 Identities = 58/66 (87%) Strand = Plus / Plus Query: 1153 ggttaaggcagaggacatggatgcatatgaccctaaaaatcttttagtcgttactacagg 1212 |||||||| ||||||||||||||| |||| ||| || ||||| |||| ||||||||||| Sbjct: 133568 ggttaaggtagaggacatggatgcctatgccccaaatgatcttctagttgttactacagg 133627 Query: 1213 ttcaca 1218 |||||| Sbjct: 133628 ttcaca 133633 Score = 48.1 bits (24), Expect = 0.18 Identities = 39/44 (88%) Strand = Plus / Plus Query: 573 tggattcgaccacacctatttttgcatcatcttttacgatggag 616 ||||||| | |||||| ||||| |||||||||||||| |||||| Sbjct: 131575 tggattcaagcacaccgattttcgcatcatcttttaccatggag 131618 Score = 46.1 bits (23), Expect = 0.72 Identities = 26/27 (96%) Strand = Plus / Plus Query: 88 cgccatggtcgcgctcgcctccctctc 114 ||||||||| ||||||||||||||||| Sbjct: 129531 cgccatggtggcgctcgcctccctctc 129557 Score = 46.1 bits (23), Expect = 0.72 Identities = 32/35 (91%) Strand = Plus / Plus Query: 2646 ttttatcatgcgaaggggaaatggcaaccaaatga 2680 |||||||| || ||||||||||||||||| ||||| Sbjct: 136992 ttttatcaagccaaggggaaatggcaacccaatga 137026
>gb|DQ246001.1| Zea mays clone 94160 mRNA sequence Length = 837 Score = 331 bits (167), Expect = 8e-87 Identities = 275/311 (88%) Strand = Plus / Plus Query: 251 gagggtgctactaagagcatggaagattcagtcaagcgaaagatggagcagttctacgag 310 ||||||||||| |||||| |||||||||| |||||||||||||||||||||||||| || Sbjct: 205 gagggtgctaccaagagcctggaagattcggtcaagcgaaagatggagcagttctatgaa 264 Query: 311 ggggtggatggtccgcccctccgggtcctcccaatcggcggccttggggaaatcggcatg 370 |||| |||||||| || || || || ||||| || ||||| |||||||||||||||||| Sbjct: 265 ggggctgatggtccacctctgcgagtgctccctattggcggtcttggggaaatcggcatg 324 Query: 371 aattgcatgctcgtcgggaactatgaccgttatattctgattgatgcaggggttatgttc 430 ||||||||||| || ||||| ||||| || ||||| |||||||||| |||||||||||| Sbjct: 325 aattgcatgcttgtggggaattatgatcgatatatcttgattgatgctggggttatgttc 384 Query: 431 ccagactacgacgagtttggtgtgcaaaagattattcctgacacaactttcatcaagaaa 490 ||||| || || ||||||||||||||||||||||| || ||||| || |||||||||||| Sbjct: 385 ccagattatgatgagtttggtgtgcaaaagattataccagacaccacattcatcaagaaa 444 Query: 491 tggagccacaagattgaagcagttattattacacatggccatgaagatcacattggtgcg 550 ||||||||||| |||||||| ||||| || || |||||||||||||||||||| |||||| Sbjct: 445 tggagccacaaaattgaagctgttatcatcacgcatggccatgaagatcacatcggtgcg 504 Query: 551 ttgccttgggt 561 ||||||||||| Sbjct: 505 ttgccttgggt 515 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 82 cgccgccgccatggtcgcgctcgcctccctctcttctctgtgcctctgcggcttcgatcg 141 ||||||||||||||| ||||||||||| ||||| ||||| || | ||||||| ||| || Sbjct: 18 cgccgccgccatggtggcgctcgcctcactctcatctctctgtccctgcggcatcgcccg 77 Query: 142 ccgccg 147 |||||| Sbjct: 78 ccgccg 83
>gb|AY110231.1| Zea mays CL852_1 mRNA sequence Length = 1931 Score = 305 bits (154), Expect = 5e-79 Identities = 239/269 (88%) Strand = Plus / Plus Query: 987 gaagagtaattacaacacaatttgcttcaaatatacatcgcattgggagcatcaaagccg 1046 ||||||||||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| | Sbjct: 16 gaagagtaattacgacacagtttgcctcaaacatacatcgaattgggagcatcaaagctg 75 Query: 1047 ctgcagacttaactggtcgaaggctggtgtttgttggaatgtcactgaggacataccttg 1106 ||||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| Sbjct: 76 ctgcagatttaactggtcgnnnnntggtatttgttggaatgtcactcaggacataccttg 135 Query: 1107 aggctgctttcagggatggaaaggcaccactggatccatcaaccttggttaaggcagagg 1166 | |||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||| Sbjct: 136 aagctgctttcaaggatggaaaggcaccactggatccatcaaccttgatcaaggtagagg 195 Query: 1167 acatggatgcatatgaccctaaaaatcttttagtcgttactacaggttcacaggcagagc 1226 | |||||||| |||| ||||||| ||||||| || || |||||||||||||| | ||||| Sbjct: 196 atatggatgcgtatgcccctaaagatcttttggttgtcactacaggttcacaaggagagc 255 Query: 1227 cacgtgcggctctgaatctcgcatcttat 1255 ||||||| ||||||||||| ||||||||| Sbjct: 256 cacgtgcagctctgaatcttgcatcttat 284 Score = 266 bits (134), Expect = 4e-67 Identities = 306/367 (83%) Strand = Plus / Plus Query: 1314 ttattcctggaaacgaatccagggtaatgaagatgttaaatcgcctcaccgaccttggcc 1373 ||||||||||||| || | |||||||||||||| | ||||| ||||| || ||||||| Sbjct: 343 ttattcctggaaatgagacacgggtaatgaagatgatgaatcgtctcactgatcttggcc 402 Query: 1374 ccaaaattgttatgggtaaagatgccggcctccatacctctgggcatgcttatcatgatg 1433 | || | |||||||||||| | ||||| ||||||||||||||||| || | || | Sbjct: 403 cnnnnnttatcatgggtaaagattctggcctgcatacctctgggcatgcctaccgagagg 462 Query: 1434 aactggaggaagttctacagattgttaaaccgcagcatttcttgcctgttcatggggaac 1493 | |||||||||||||| | |||||||||||| || |||||||||||||||||||| |||| Sbjct: 463 agctggaggaagttcttcggattgttaaaccacaacatttcttgcctgttcatggagaac 522 Query: 1494 tcctgtttctcaaagagcatgaattgctcggaaggtcaactggcataaggcacactactg 1553 |||| ||||||||||| ||||||| || ||||| |||||||||||| ||||||| |||| Sbjct: 523 tcctatttctcaaagaacatgaatcacttggaagatcaactggcatacggcacacaactg 582 Query: 1554 taattaaaaatggggagatgcttggtgtatctcatttaagaaacagaaaggttttgtcaa 1613 |||| ||| || |||||||||||||| ||| |||||||||||| |||||||| | Sbjct: 583 taatnnnnnntggagaaatgcttggtgtatcgcatctaagaaacagaagagttttgtcca 642 Query: 1614 atgggtttatttctttagggaagcaggactttaagctaatgtatagtgatggagacaaag 1673 |||||||| |||| ||||||||| |||| || |||| |||||||||||||| || |||| Sbjct: 643 atgggtttgtttcattagggaaggaggatcttcagctcatgtatagtgatggtgataaag 702 Query: 1674 cttttgg 1680 ||||||| Sbjct: 703 cttttgg 709 Score = 196 bits (99), Expect = 3e-46 Identities = 174/199 (87%) Strand = Plus / Plus Query: 1790 ttgaaagggaaatttaaaataactacacggtgtctatggcttgataatgggagactactc 1849 |||||||| |||||||| || || ||| | |||||||||||||||||||| ||| | | Sbjct: 825 ttgaaaggaaaatttaagattacgacaagatgtctatggcttgataatggaagattgtta 884 Query: 1850 gacgcactttacaaggctgcacatgctgcattgtcaagctgtcctttgaattgcccactt 1909 |||||||| ||||| || || |||||||||||||||||||||||| ||||||| |||||| Sbjct: 885 gacgcactctacaaagcagctcatgctgcattgtcaagctgtcctgtgaattgtccactt 944 Query: 1910 agtcacatggagcggatggtatctgaaatcttgaggaaaatggtcagaaagtacagtgga 1969 |||||||||||| |||||||| |||||||||||||||||||||| | ||||| ||||| Sbjct: 945 agtcacatggagaggatggtagctgaaatcttgaggaaaatggtacggaagtatagtggg 1004 Query: 1970 aagagacctgacgtcattg 1988 ||||| ||||||||||||| Sbjct: 1005 aagaggcctgacgtcattg 1023 Score = 170 bits (86), Expect = 2e-38 Identities = 197/236 (83%) Strand = Plus / Plus Query: 2363 tcagctcccgctccagctaaatcttcaagaaagaacaagtggaagcccgaggaaattaag 2422 |||||||| ||||||||||||||||| |||||||||||| || |||||||| ||| Sbjct: 1413 tcagctccggctccagctaaatcttcnnnnnngaacaagtggaaacctgaggaaatcaag 1472 Query: 2423 agcttaatacagctgcgtggggaaatggatgagaaattccaatccgtgaaaggaagaatg 2482 |||||||||||| ||||||| || ||| |||||| ||| || |||||||||||||||| Sbjct: 1473 agcttaatacagatgcgtggcgagatgaatgagagatttcagagcgtgaaaggaagaatg 1532 Query: 2483 gttctttgggaagagatatctggtagcctgttgaagcaggggataactcgtacaccggca 2542 || || ||||| ||||| || | | | |||||||||| || |||| |||||| |||||| Sbjct: 1533 gtcctgtgggaggagatttccgacaacatgttgaagcaaggaataagtcgtactccggca 1592 Query: 2543 cagtgcaaatctgtgtggacatcattgcttcagaaatacgaggagagcaagaagga 2598 ||||||||||| | |||||||| || |||||||||||||||| ||||||||||| Sbjct: 1593 cagtgcaaatcgctttggacatcgttagttcagaaatacgaggaaagcaagaagga 1648 Score = 139 bits (70), Expect = 6e-29 Identities = 112/126 (88%) Strand = Plus / Plus Query: 2171 gatgcaaccactagctccaatggtgaatcattcttatcttctgatttacatcagcctaaa 2230 ||||||||||| || |||||||||||| ||||||| ||||| |||||||||||||||||| Sbjct: 1227 gatgcaaccacaagttccaatggtgaagcattcttctcttcagatttacatcagcctaaa 1286 Query: 2231 acattggatcatttttgggagtccttcaaatcccctacagcagtaaaaattgcaagaatt 2290 |||||||| || || |||||||| |||||||| |||||||| || ||||||||| | ||| Sbjct: 1287 acattggagcacttctgggagtcattcaaatctcctacagctgttaaaattgcacggatt 1346 Query: 2291 gtcaat 2296 |||||| Sbjct: 1347 gtcaat 1352
>gb|BT018195.1| Zea mays clone EL01N0559C12.c mRNA sequence Length = 1458 Score = 232 bits (117), Expect = 6e-57 Identities = 213/245 (86%) Strand = Plus / Plus Query: 1782 agtcaggcttgaaagggaaatttaaaataactacacggtgtctatggcttgataatggga 1841 ||||||| |||||||| |||||||| || || ||| | |||||||||||||||||||| | Sbjct: 172 agtcaggtttgaaaggaaaatttaagattaccacaagatgtctatggcttgataatggaa 231 Query: 1842 gactactcgacgcactttacaaggctgcacatgctgcattgtcaagctgtcctttgaatt 1901 || || | ||||| || ||||| || || |||||||||||||||||||||||| |||||| Sbjct: 232 gattattggacgcgctctacaaagcagctcatgctgcattgtcaagctgtcctgtgaatt 291 Query: 1902 gcccacttagtcacatggagcggatggtatctgaaatcttgaggaaaatggtcagaaagt 1961 | |||| ||||||||||||| |||||||| |||||||||||||||||||||| | |||| Sbjct: 292 gtccacatagtcacatggagaggatggtagctgaaatcttgaggaaaatggtacggaagt 351 Query: 1962 acagtggaaagagacctgacgtcattgtagttgcttcagagaacactacagtaggtttca 2021 | ||||||||||| ||||||||||||| |||||| |||||||||| |||| ||||||| Sbjct: 352 atagtggaaagaggcctgacgtcattgctgttgctacagagaacaccacagcaggtttct 411 Query: 2022 cagaa 2026 ||||| Sbjct: 412 cagaa 416 Score = 165 bits (83), Expect = 1e-36 Identities = 194/231 (83%) Strand = Plus / Plus Query: 2363 tcagctcccgctccagctaaatcttcaagaaagaacaagtggaagcccgaggaaattaag 2422 |||||||| ||||||| |||||| |||| | |||||||||||| || |||||||||||| Sbjct: 768 tcagctcctgctccagttaaatcctcaaaacggaacaagtggaaacctgaggaaattaag 827 Query: 2423 agcttaatacagctgcgtggggaaatggatgagaaattccaatccgtgaaaggaagaatg 2482 |||||||||||| ||||||| |||||| |||||||||| || |||||||||||||||| Sbjct: 828 agcttaatacagatgcgtggcgaaatgaatgagaaatttcagagcgtgaaaggaagaatg 887 Query: 2483 gttctttgggaagagatatctggtagcctgttgaagcaggggataactcgtacaccggca 2542 || || ||| | ||||| |||| || | ||||||| || || ||| |||||| |||||| Sbjct: 888 gtactgtggaaggagatttctgataccatgttgaaccaaggagtaagtcgtactccggca 947 Query: 2543 cagtgcaaatctgtgtggacatcattgcttcagaaatacgaggagagcaag 2593 |||||||||||| | |||||||| | |||||||||| ||||| |||||| Sbjct: 948 cagtgcaaatctctatggacatcgctagttcagaaatatgaggaaagcaag 998 Score = 153 bits (77), Expect = 4e-33 Identities = 122/137 (89%) Strand = Plus / Plus Query: 2161 aacacctgacgatgcaaccactagctccaatggtgaatcattcttatcttctgatttaca 2220 |||||| |||||||||||||| ||||||||||| ||| |||| || ||||| |||||||| Sbjct: 572 aacacccgacgatgcaaccacaagctccaatggcgaagcattattctcttcagatttaca 631 Query: 2221 tcagcctaaaacattggatcatttttgggagtccttcaaatcccctacagcagtaaaaat 2280 |||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||| Sbjct: 632 tcagcctaaaacattggagcacttttgggagtcattcaaatcccctacagctgtcaaaat 691 Query: 2281 tgcaagaattgtcaatg 2297 |||| | || ||||||| Sbjct: 692 tgcacggatcgtcaatg 708 Score = 123 bits (62), Expect = 4e-24 Identities = 101/114 (88%) Strand = Plus / Plus Query: 1652 atgtatagtgatggagacaaagcttttggaacatctactgatctctgcattgatgaaaga 1711 |||||||||||||| || || |||||||| ||||| |||||||||||| ||||||| ||| Sbjct: 36 atgtatagtgatggtgataaggcttttggtacatccactgatctctgcgttgatgagaga 95 Query: 1712 ttcaggattgcatctgatggcattatctttgtcagcatggagatcttccgacct 1765 | || |||||||||||||||||||| ||||| || |||||||||||||||||| Sbjct: 96 ctaagaattgcatctgatggcattatttttgtaagtatggagatcttccgacct 149
>ref|NM_125737.3| Arabidopsis thaliana EMB2746; catalytic (EMB2746) mRNA, complete cds Length = 3026 Score = 111 bits (56), Expect = 1e-20 Identities = 122/144 (84%) Strand = Plus / Plus Query: 497 cacaagattgaagcagttattattacacatggccatgaagatcacattggtgcgttgcct 556 ||||| |||||||| ||| |||| || ||||| ||||||||||||||||||||||||||| Sbjct: 625 cacaaaattgaagctgttgttataacgcatggtcatgaagatcacattggtgcgttgcct 684 Query: 557 tgggttattcctgcattggattcgaccacacctatttttgcatcatcttttacgatggag 616 |||||||| || |||||||| | | ||||| || || |||||||| || || |||||| Sbjct: 685 tgggttatcccagcattggaccctaatacaccaatattcgcatcatccttcaccatggag 744 Query: 617 ctcataaaaaagcgtttgaaggag 640 || ||||| ||||| ||||||||| Sbjct: 745 cttataaagaagcgcttgaaggag 768 Score = 73.8 bits (37), Expect = 3e-09 Identities = 118/145 (81%) Strand = Plus / Plus Query: 987 gaagagtaattacaacacaatttgcttcaaatatacatcgcattgggagcatcaaagccg 1046 |||||||||| ||||| || ||||| || |||||||| || | || || || ||||| | Sbjct: 1112 gaagagtaatcacaactcagtttgcctctaatatacaccgtttgggaagtataaaagctg 1171 Query: 1047 ctgcagacttaactggtcgaaggctggtgtttgttggaatgtcactgaggacataccttg 1106 |||| || |||||||||||| | |||| |||||||| ||||| || |||||||||| | Sbjct: 1172 ctgctgatataactggtcgaaagttggtctttgttggcatgtcgttgcggacatacctag 1231 Query: 1107 aggctgctttcagggatggaaaggc 1131 |||| |||| |||||||||||||| Sbjct: 1232 aggcagcttggagggatggaaaggc 1256 Score = 65.9 bits (33), Expect = 8e-07 Identities = 213/273 (78%) Strand = Plus / Plus Query: 1484 catggggaactcctgtttctcaaagagcatgaattgctcggaaggtcaactggcataagg 1543 ||||| ||||| ||||||| || |||||||| |||||||| | ||| ||||| || || Sbjct: 1609 catggagaacttttgtttcttaaggagcatgagttgctcgggaagtctactgggattaga 1668 Query: 1544 cacactactgtaattaaaaatggggagatgcttggtgtatctcatttaagaaacagaaag 1603 ||||||||||| || || || || || ||||| || || ||||| | ||||| |||| | Sbjct: 1669 cacactactgttataaagaacggagaaatgctaggagtttctcacctgagaaatagaagg 1728 Query: 1604 gttttgtcaaatgggtttatttctttagggaagcaggactttaagctaatgtatagtgat 1663 |||||||| ||||| |||| ||| | || | | || | || || |||||||||||||| Sbjct: 1729 gttttgtctaatggatttagctctcttggcagggagaatttgcagttaatgtatagtgat 1788 Query: 1664 ggagacaaagcttttggaacatctactgatctctgcattgatgaaagattcaggattgca 1723 || || ||||| ||||| ||||| | || || |||||||| ||| || | || ||| | Sbjct: 1789 ggtgataaagcatttggcacatcaagcgaactatgcattgacgaacgacttagaatttct 1848 Query: 1724 tctgatggcattatctttgtcagcatggagatc 1756 |||||||||||||| || | |||||||||||| Sbjct: 1849 tctgatggcattatagttctgagcatggagatc 1881 Score = 56.0 bits (28), Expect = 8e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 797 ggtgactggaaaattgatgaatcaccagtggatggaaaaatattcgaccgacaagcattg 856 ||||| ||||| ||||||||| ||||| ||||||||||| | || || || |||| || Sbjct: 925 ggtgattggaagattgatgaagcaccattggatggaaaagtctttgatcgtgaagcttta 984 Query: 857 gaggagctctcgaaagaaggtgttactctgatgatgagtgactctacaaatattctgtcc 916 || || ||||| || ||||| || || |||||||||||||||| |||||| | |||| Sbjct: 985 gaagaactctcaaaggaaggagtcacattgatgatgagtgactcaacaaatgtgttgtca 1044 Query: 917 cctggaag 924 |||||||| Sbjct: 1045 cctggaag 1052 Score = 50.1 bits (25), Expect = 0.046 Identities = 49/57 (85%) Strand = Plus / Plus Query: 2537 ccggcacagtgcaaatctgtgtggacatcattgcttcagaaatacgaggagagcaag 2593 |||| ||| ||||||||| | ||| ||||| | ||||||||||||||||||||||| Sbjct: 2725 ccgggacaatgcaaatctctctgggcatcacttattcagaaatacgaggagagcaag 2781
>dbj|AK221272.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL24-15-P14 Length = 3036 Score = 111 bits (56), Expect = 1e-20 Identities = 122/144 (84%) Strand = Plus / Plus Query: 497 cacaagattgaagcagttattattacacatggccatgaagatcacattggtgcgttgcct 556 ||||| |||||||| ||| |||| || ||||| ||||||||||||||||||||||||||| Sbjct: 625 cacaaaattgaagctgttgttataacgcatggtcatgaagatcacattggtgcgttgcct 684 Query: 557 tgggttattcctgcattggattcgaccacacctatttttgcatcatcttttacgatggag 616 |||||||| || |||||||| | | ||||| || || |||||||| || || |||||| Sbjct: 685 tgggttatcccagcattggaccctaatacaccaatattcgcatcatccttcaccatggag 744 Query: 617 ctcataaaaaagcgtttgaaggag 640 || ||||| ||||| ||||||||| Sbjct: 745 cttataaagaagcgcttgaaggag 768 Score = 73.8 bits (37), Expect = 3e-09 Identities = 118/145 (81%) Strand = Plus / Plus Query: 987 gaagagtaattacaacacaatttgcttcaaatatacatcgcattgggagcatcaaagccg 1046 |||||||||| ||||| || ||||| || |||||||| || | || || || ||||| | Sbjct: 1112 gaagagtaatcacaactcagtttgcctctaatatacaccgtttgggaagtataaaagctg 1171 Query: 1047 ctgcagacttaactggtcgaaggctggtgtttgttggaatgtcactgaggacataccttg 1106 |||| || |||||||||||| | |||| |||||||| ||||| || |||||||||| | Sbjct: 1172 ctgctgatataactggtcgaaagttggtctttgttggcatgtcgttgcggacatacctag 1231 Query: 1107 aggctgctttcagggatggaaaggc 1131 |||| |||| |||||||||||||| Sbjct: 1232 aggcagcttggagggatggaaaggc 1256 Score = 65.9 bits (33), Expect = 8e-07 Identities = 213/273 (78%) Strand = Plus / Plus Query: 1484 catggggaactcctgtttctcaaagagcatgaattgctcggaaggtcaactggcataagg 1543 ||||| ||||| ||||||| || |||||||| |||||||| | ||| ||||| || || Sbjct: 1609 catggagaacttttgtttcttaaggagcatgagttgctcgggaagtctactgggattaga 1668 Query: 1544 cacactactgtaattaaaaatggggagatgcttggtgtatctcatttaagaaacagaaag 1603 ||||||||||| || || || || || ||||| || || ||||| | ||||| |||| | Sbjct: 1669 cacactactgttataaagaacggagaaatgctaggagtttctcacctgagaaatagaagg 1728 Query: 1604 gttttgtcaaatgggtttatttctttagggaagcaggactttaagctaatgtatagtgat 1663 |||||||| ||||| |||| ||| | || | | || | || || |||||||||||||| Sbjct: 1729 gttttgtctaatggatttagctctcttggcagggagaatttgcagttaatgtatagtgat 1788 Query: 1664 ggagacaaagcttttggaacatctactgatctctgcattgatgaaagattcaggattgca 1723 || || ||||| ||||| ||||| | || || |||||||| ||| || | || ||| | Sbjct: 1789 ggtgataaagcatttggcacatcaagcgaactatgcattgacgaacgacttagaatttct 1848 Query: 1724 tctgatggcattatctttgtcagcatggagatc 1756 |||||||||||||| || | |||||||||||| Sbjct: 1849 tctgatggcattatagttctgagcatggagatc 1881 Score = 56.0 bits (28), Expect = 8e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 797 ggtgactggaaaattgatgaatcaccagtggatggaaaaatattcgaccgacaagcattg 856 ||||| ||||| ||||||||| ||||| ||||||||||| | || || || |||| || Sbjct: 925 ggtgattggaagattgatgaagcaccattggatggaaaagtctttgatcgtgaagcttta 984 Query: 857 gaggagctctcgaaagaaggtgttactctgatgatgagtgactctacaaatattctgtcc 916 || || ||||| || ||||| || || |||||||||||||||| |||||| | |||| Sbjct: 985 gaagaactctcaaaggaaggagtcacattgatgatgagtgactcaacaaatgtgttgtca 1044 Query: 917 cctggaag 924 |||||||| Sbjct: 1045 cctggaag 1052 Score = 50.1 bits (25), Expect = 0.046 Identities = 49/57 (85%) Strand = Plus / Plus Query: 2537 ccggcacagtgcaaatctgtgtggacatcattgcttcagaaatacgaggagagcaag 2593 |||| ||| ||||||||| | ||| ||||| | ||||||||||||||||||||||| Sbjct: 2725 ccgggacaatgcaaatctctctgggcatcacttattcagaaatacgaggagagcaag 2781
>gb|BT004210.1| Arabidopsis thaliana clone RAFL16-01-C03 (R50172) unknown protein (At5g63420) mRNA, complete cds Length = 3042 Score = 111 bits (56), Expect = 1e-20 Identities = 122/144 (84%) Strand = Plus / Plus Query: 497 cacaagattgaagcagttattattacacatggccatgaagatcacattggtgcgttgcct 556 ||||| |||||||| ||| |||| || ||||| ||||||||||||||||||||||||||| Sbjct: 625 cacaaaattgaagctgttgttataacgcatggtcatgaagatcacattggtgcgttgcct 684 Query: 557 tgggttattcctgcattggattcgaccacacctatttttgcatcatcttttacgatggag 616 |||||||| || |||||||| | | ||||| || || |||||||| || || |||||| Sbjct: 685 tgggttatcccagcattggaccctaatacaccaatattcgcatcatccttcaccatggag 744 Query: 617 ctcataaaaaagcgtttgaaggag 640 || ||||| ||||| ||||||||| Sbjct: 745 cttataaagaagcgcttgaaggag 768 Score = 73.8 bits (37), Expect = 3e-09 Identities = 118/145 (81%) Strand = Plus / Plus Query: 987 gaagagtaattacaacacaatttgcttcaaatatacatcgcattgggagcatcaaagccg 1046 |||||||||| ||||| || ||||| || |||||||| || | || || || ||||| | Sbjct: 1112 gaagagtaatcacaactcagtttgcctctaatatacaccgtttgggaagtataaaagctg 1171 Query: 1047 ctgcagacttaactggtcgaaggctggtgtttgttggaatgtcactgaggacataccttg 1106 |||| || |||||||||||| | |||| |||||||| ||||| || |||||||||| | Sbjct: 1172 ctgctgatataactggtcgaaagttggtctttgttggcatgtcgttgcggacatacctag 1231 Query: 1107 aggctgctttcagggatggaaaggc 1131 |||| |||| |||||||||||||| Sbjct: 1232 aggcagcttggagggatggaaaggc 1256 Score = 65.9 bits (33), Expect = 8e-07 Identities = 213/273 (78%) Strand = Plus / Plus Query: 1484 catggggaactcctgtttctcaaagagcatgaattgctcggaaggtcaactggcataagg 1543 ||||| ||||| ||||||| || |||||||| |||||||| | ||| ||||| || || Sbjct: 1609 catggagaacttttgtttcttaaggagcatgagttgctcgggaagtctactgggattaga 1668 Query: 1544 cacactactgtaattaaaaatggggagatgcttggtgtatctcatttaagaaacagaaag 1603 ||||||||||| || || || || || ||||| || || ||||| | ||||| |||| | Sbjct: 1669 cacactactgttataaagaacggagaaatgctaggagtttctcacctgagaaatagaagg 1728 Query: 1604 gttttgtcaaatgggtttatttctttagggaagcaggactttaagctaatgtatagtgat 1663 |||||||| ||||| |||| ||| | || | | || | || || |||||||||||||| Sbjct: 1729 gttttgtctaatggatttagctctcttggcagggagaatttgcagttaatgtatagtgat 1788 Query: 1664 ggagacaaagcttttggaacatctactgatctctgcattgatgaaagattcaggattgca 1723 || || ||||| ||||| ||||| | || || |||||||| ||| || | || ||| | Sbjct: 1789 ggtgataaagcatttggcacatcaagcgaactatgcattgacgaacgacttagaatttct 1848 Query: 1724 tctgatggcattatctttgtcagcatggagatc 1756 |||||||||||||| || | |||||||||||| Sbjct: 1849 tctgatggcattatagttctgagcatggagatc 1881 Score = 56.0 bits (28), Expect = 8e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 797 ggtgactggaaaattgatgaatcaccagtggatggaaaaatattcgaccgacaagcattg 856 ||||| ||||| ||||||||| ||||| ||||||||||| | || || || |||| || Sbjct: 925 ggtgattggaagattgatgaagcaccattggatggaaaagtctttgatcgtgaagcttta 984 Query: 857 gaggagctctcgaaagaaggtgttactctgatgatgagtgactctacaaatattctgtcc 916 || || ||||| || ||||| || || |||||||||||||||| |||||| | |||| Sbjct: 985 gaagaactctcaaaggaaggagtcacattgatgatgagtgactcaacaaatgtgttgtca 1044 Query: 917 cctggaag 924 |||||||| Sbjct: 1045 cctggaag 1052 Score = 50.1 bits (25), Expect = 0.046 Identities = 49/57 (85%) Strand = Plus / Plus Query: 2537 ccggcacagtgcaaatctgtgtggacatcattgcttcagaaatacgaggagagcaag 2593 |||| ||| ||||||||| | ||| ||||| | ||||||||||||||||||||||| Sbjct: 2725 ccgggacaatgcaaatctctctgggcatcacttattcagaaatacgaggagagcaag 2781
>dbj|AK176547.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL25-06-L06 Length = 2942 Score = 111 bits (56), Expect = 1e-20 Identities = 122/144 (84%) Strand = Plus / Plus Query: 497 cacaagattgaagcagttattattacacatggccatgaagatcacattggtgcgttgcct 556 ||||| |||||||| ||| |||| || ||||| ||||||||||||||||||||||||||| Sbjct: 586 cacaaaattgaagctgttgttataacgcatggtcatgaagatcacattggtgcgttgcct 645 Query: 557 tgggttattcctgcattggattcgaccacacctatttttgcatcatcttttacgatggag 616 |||||||| || |||||||| | | ||||| || || |||||||| || || |||||| Sbjct: 646 tgggttatcccagcattggaccctaatacaccaatattcgcatcatccttcaccatggag 705 Query: 617 ctcataaaaaagcgtttgaaggag 640 || ||||| ||||| ||||||||| Sbjct: 706 cttataaagaagcgcttgaaggag 729 Score = 71.9 bits (36), Expect = 1e-08 Identities = 117/144 (81%) Strand = Plus / Plus Query: 988 aagagtaattacaacacaatttgcttcaaatatacatcgcattgggagcatcaaagccgc 1047 ||||||||| ||||| || ||||| || |||||||| || | || || || ||||| || Sbjct: 1074 aagagtaatcacaactcagtttgcctctaatatacaccgtttgggaagtataaaagctgc 1133 Query: 1048 tgcagacttaactggtcgaaggctggtgtttgttggaatgtcactgaggacataccttga 1107 ||| || |||||||||||| | |||| |||||||| ||||| || |||||||||| || Sbjct: 1134 tgctgatataactggtcgaaagttggtctttgttggcatgtcgttgcggacatacctaga 1193 Query: 1108 ggctgctttcagggatggaaaggc 1131 ||| |||| |||||||||||||| Sbjct: 1194 ggcagcttggagggatggaaaggc 1217 Score = 65.9 bits (33), Expect = 8e-07 Identities = 213/273 (78%) Strand = Plus / Plus Query: 1484 catggggaactcctgtttctcaaagagcatgaattgctcggaaggtcaactggcataagg 1543 ||||| ||||| ||||||| || |||||||| |||||||| | ||| ||||| || || Sbjct: 1570 catggagaacttttgtttcttaaggagcatgagttgctcgggaagtctactgggattaga 1629 Query: 1544 cacactactgtaattaaaaatggggagatgcttggtgtatctcatttaagaaacagaaag 1603 ||||||||||| || || || || || ||||| || || ||||| | ||||| |||| | Sbjct: 1630 cacactactgttataaagaacggagaaatgctaggagtttctcacctgagaaatagaagg 1689 Query: 1604 gttttgtcaaatgggtttatttctttagggaagcaggactttaagctaatgtatagtgat 1663 |||||||| ||||| |||| ||| | || | | || | || || |||||||||||||| Sbjct: 1690 gttttgtctaatggatttagctctcttggcagggagaatttgcagttaatgtatagtgat 1749 Query: 1664 ggagacaaagcttttggaacatctactgatctctgcattgatgaaagattcaggattgca 1723 || || ||||| ||||| ||||| | || || |||||||| ||| || | || ||| | Sbjct: 1750 ggtgataaagcatttggcacatcaagcgaactatgcattgacgaacgacttagaatttct 1809 Query: 1724 tctgatggcattatctttgtcagcatggagatc 1756 |||||||||||||| || | |||||||||||| Sbjct: 1810 tctgatggcattatagttctgagcatggagatc 1842 Score = 56.0 bits (28), Expect = 8e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 797 ggtgactggaaaattgatgaatcaccagtggatggaaaaatattcgaccgacaagcattg 856 ||||| ||||| ||||||||| ||||| ||||||||||| | || || || |||| || Sbjct: 886 ggtgattggaagattgatgaagcaccattggatggaaaagtctttgatcgtgaagcttta 945 Query: 857 gaggagctctcgaaagaaggtgttactctgatgatgagtgactctacaaatattctgtcc 916 || || ||||| || ||||| || || |||||||||||||||| |||||| | |||| Sbjct: 946 gaagaactctcaaaggaaggagtcacattgatgatgagtgactcaacaaatgtgttgtca 1005 Query: 917 cctggaag 924 |||||||| Sbjct: 1006 cctggaag 1013 Score = 50.1 bits (25), Expect = 0.046 Identities = 49/57 (85%) Strand = Plus / Plus Query: 2537 ccggcacagtgcaaatctgtgtggacatcattgcttcagaaatacgaggagagcaag 2593 |||| ||| ||||||||| | ||| ||||| | ||||||||||||||||||||||| Sbjct: 2686 ccgggacaatgcaaatctctctgggcatcacttattcagaaatacgaggagagcaag 2742
>emb|CU012042.6| M.truncatula DNA sequence from clone MTH2-25G4 on chromosome 3, complete sequence Length = 124442 Score = 93.7 bits (47), Expect = 3e-15 Identities = 92/107 (85%) Strand = Plus / Plus Query: 455 caaaagattattcctgacacaactttcatcaagaaatggagccacaagattgaagcagtt 514 ||||||||||| ||||| ||||| || || | |||||||||||||| |||||||| || Sbjct: 90050 caaaagattatacctgatacaacgtttataagaaaatggagccacaaaattgaagcgctt 90109 Query: 515 attattacacatggccatgaagatcacattggtgcgttgccttgggt 561 |||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 90110 gttataacacatggtcatgaagatcatattggtgcgttgccctgggt 90156 Score = 48.1 bits (24), Expect = 0.18 Identities = 33/36 (91%) Strand = Plus / Plus Query: 2468 gtgaaaggaagaatggttctttgggaagagatatct 2503 ||||||||||| |||| ||| ||||||||||||||| Sbjct: 96414 gtgaaaggaaggatggctctctgggaagagatatct 96449 Score = 46.1 bits (23), Expect = 0.72 Identities = 50/59 (84%) Strand = Plus / Plus Query: 359 gaaatcggcatgaattgcatgctcgtcgggaactatgaccgttatattctgattgatgc 417 ||||| || ||||| || |||||||| ||||| ||||||||||||| || |||||||| Sbjct: 89295 gaaattggaatgaactgtatgctcgttgggaatcatgaccgttatatcctcattgatgc 89353
>gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete sequence Length = 135659 Score = 93.7 bits (47), Expect = 3e-15 Identities = 92/107 (85%) Strand = Plus / Plus Query: 455 caaaagattattcctgacacaactttcatcaagaaatggagccacaagattgaagcagtt 514 ||||||||||| ||||| ||||| || || | |||||||||||||| |||||||| || Sbjct: 51605 caaaagattatacctgatacaacgtttataagaaaatggagccacaaaattgaagcgctt 51664 Query: 515 attattacacatggccatgaagatcacattggtgcgttgccttgggt 561 |||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 51665 gttataacacatggtcatgaagatcatattggtgcgttgccctgggt 51711 Score = 48.1 bits (24), Expect = 0.18 Identities = 33/36 (91%) Strand = Plus / Plus Query: 2468 gtgaaaggaagaatggttctttgggaagagatatct 2503 ||||||||||| |||| ||| ||||||||||||||| Sbjct: 57969 gtgaaaggaaggatggctctctgggaagagatatct 58004 Score = 46.1 bits (23), Expect = 0.72 Identities = 50/59 (84%) Strand = Plus / Plus Query: 359 gaaatcggcatgaattgcatgctcgtcgggaactatgaccgttatattctgattgatgc 417 ||||| || ||||| || |||||||| ||||| ||||||||||||| || |||||||| Sbjct: 50850 gaaattggaatgaactgtatgctcgttgggaatcatgaccgttatatcctcattgatgc 50908
>dbj|AB007649.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLE2 Length = 58527 Score = 81.8 bits (41), Expect = 1e-11 Identities = 59/65 (90%) Strand = Plus / Plus Query: 497 cacaagattgaagcagttattattacacatggccatgaagatcacattggtgcgttgcct 556 ||||| |||||||| ||| |||| || ||||| ||||||||||||||||||||||||||| Sbjct: 13117 cacaaaattgaagctgttgttataacgcatggtcatgaagatcacattggtgcgttgcct 13176 Query: 557 tgggt 561 ||||| Sbjct: 13177 tgggt 13181 Score = 50.1 bits (25), Expect = 0.046 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1484 catggggaactcctgtttctcaaagagcatgaattgctcggaaggtcaactggcataagg 1543 ||||| ||||| ||||||| || |||||||| |||||||| | ||| ||||| || || Sbjct: 15517 catggagaacttttgtttcttaaggagcatgagttgctcgggaagtctactgggattaga 15576 Query: 1544 cacactactgtaa 1556 ||||||||||||| Sbjct: 15577 cacactactgtaa 15589 Score = 48.1 bits (24), Expect = 0.18 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1076 tttgttggaatgtcactgaggacataccttgaggctgctttcagggatggaaaggc 1131 |||||||| ||||| || |||||||||| ||||| |||| |||||||||||||| Sbjct: 14508 tttgttggcatgtcgttgcggacatacctagaggcagcttggagggatggaaaggc 14563 Score = 48.1 bits (24), Expect = 0.18 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1650 taatgtatagtgatggagacaaagcttttggaacatctactgatctctgcattgatgaaa 1709 |||||||||||||||| || ||||| ||||| ||||| | || || |||||||| ||| Sbjct: 16100 taatgtatagtgatggtgataaagcatttggcacatcaagcgaactatgcattgacgaac 16159 Query: 1710 gattcaggattgcatctgatggcattat 1737 || | || ||| | |||||||||||||| Sbjct: 16160 gacttagaatttcttctgatggcattat 16187
>gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete sequence Length = 124563 Score = 79.8 bits (40), Expect = 5e-11 Identities = 88/104 (84%) Strand = Plus / Plus Query: 458 aagattattcctgacacaactttcatcaagaaatggagccacaagattgaagcagttatt 517 ||||| || ||||| ||||| || || || |||||||||||||| ||||||||||| || Sbjct: 40425 aagataatacctgatacaacatttattaaaaaatggagccacaaaattgaagcagtagtt 40484 Query: 518 attacacatggccatgaagatcacattggtgcgttgccttgggt 561 || ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 40485 ataacacacggtcatgaagatcatatcggtgcattgccttgggt 40528 Score = 54.0 bits (27), Expect = 0.003 Identities = 60/71 (84%) Strand = Plus / Plus Query: 1654 gtatagtgatggagacaaagcttttggaacatctactgatctctgcattgatgaaagatt 1713 ||||||||| || |||||||| ||||| ||||| | ||| |||| ||||||||||||| | Sbjct: 45801 gtatagtgacggtgacaaagcatttggcacatcaagtgaactcttcattgatgaaagact 45860 Query: 1714 caggattgcat 1724 || ||||||| Sbjct: 45861 aagaattgcat 45871
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 52.0 bits (26), Expect = 0.012 Identities = 32/34 (94%) Strand = Plus / Plus Query: 524 catggccatgaagatcacattggtgcgttgcctt 557 ||||| ||||||||||| |||||||||||||||| Sbjct: 1831587 catggacatgaagatcatattggtgcgttgcctt 1831620
>ref|XM_773520.1| Giardia lamblia ATCC 50803 glycosylation-inhibiting factor (GLP_111_71171_70827) partial mRNA Length = 345 Score = 52.0 bits (26), Expect = 0.012 Identities = 26/26 (100%) Strand = Plus / Plus Query: 1674 cttttggaacatctactgatctctgc 1699 |||||||||||||||||||||||||| Sbjct: 146 cttttggaacatctactgatctctgc 171
>ref|XM_773519.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_111_70821_71108) partial mRNA Length = 288 Score = 52.0 bits (26), Expect = 0.012 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1674 cttttggaacatctactgatctctgc 1699 |||||||||||||||||||||||||| Sbjct: 206 cttttggaacatctactgatctctgc 181
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome Length = 799476 Score = 50.1 bits (25), Expect = 0.046 Identities = 31/33 (93%) Strand = Plus / Plus Query: 516 ttattacacatggccatgaagatcacattggtg 548 |||| |||||||| ||||||||||||||||||| Sbjct: 638902 ttataacacatggacatgaagatcacattggtg 638934
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2021 acagaagaggtaataaataaatca 2044 |||||||||||||||||||||||| Sbjct: 21323336 acagaagaggtaataaataaatca 21323359
>dbj|AK128869.1| Homo sapiens cDNA FLJ46847 fis, clone UTERU3005264 Length = 4088 Score = 48.1 bits (24), Expect = 0.18 Identities = 27/28 (96%) Strand = Plus / Minus Query: 64 cccggtccgaacctcccgcgccgccgcc 91 |||| ||||||||||||||||||||||| Sbjct: 43 cccgctccgaacctcccgcgccgccgcc 16
>gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8 Length = 278911 Score = 48.1 bits (24), Expect = 0.18 Identities = 27/28 (96%) Strand = Plus / Minus Query: 64 cccggtccgaacctcccgcgccgccgcc 91 |||| ||||||||||||||||||||||| Sbjct: 4884 cccgctccgaacctcccgcgccgccgcc 4857
>gb|AC010017.5| Drosophila melanogaster 3L BAC RP98-2C22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182960 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2021 acagaagaggtaataaataaatca 2044 |||||||||||||||||||||||| Sbjct: 24246 acagaagaggtaataaataaatca 24223
>gb|AC099553.1| Drosophila melanogaster 3L BAC RP98-25G5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177608 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2021 acagaagaggtaataaataaatca 2044 |||||||||||||||||||||||| Sbjct: 36893 acagaagaggtaataaataaatca 36916
>emb|AL031033.5|HS321D2 Human DNA sequence from clone LA16c-321D2 on chromosome 16 Contains a gene for a Ribosomal Large Subunit Pseudouridine Synthase (EC 4.2.1.70, Pseudouridylate Synthase, Uracil Hydrolase) LIKE protein, a gene for a novel protein similar to replication factors, and part of a novel gene and ESTs, complete sequence Length = 25815 Score = 48.1 bits (24), Expect = 0.18 Identities = 27/28 (96%) Strand = Plus / Minus Query: 64 cccggtccgaacctcccgcgccgccgcc 91 |||| ||||||||||||||||||||||| Sbjct: 4392 cccgctccgaacctcccgcgccgccgcc 4365
>dbj|AK024476.1| Homo sapiens mRNA for FLJ00069 protein, partial cds Length = 4494 Score = 48.1 bits (24), Expect = 0.18 Identities = 27/28 (96%) Strand = Plus / Minus Query: 64 cccggtccgaacctcccgcgccgccgcc 91 |||| ||||||||||||||||||||||| Sbjct: 30 cccgctccgaacctcccgcgccgccgcc 3
>emb|AJ333112.1|HSA333112 Homo sapiens genomic sequence surrounding NotI site, clone NR1-MM18RS Length = 584 Score = 48.1 bits (24), Expect = 0.18 Identities = 27/28 (96%) Strand = Plus / Plus Query: 64 cccggtccgaacctcccgcgccgccgcc 91 |||| ||||||||||||||||||||||| Sbjct: 245 cccgctccgaacctcccgcgccgccgcc 272
>emb|BX293563.9| Mouse DNA sequence from clone RP23-379K6 on chromosome 4, complete sequence Length = 104349 Score = 48.1 bits (24), Expect = 0.18 Identities = 27/28 (96%) Strand = Plus / Minus Query: 32 ctccactccactccacgccctccctccc 59 |||||||||||||||| ||||||||||| Sbjct: 19615 ctccactccactccactccctccctccc 19588
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 46.1 bits (23), Expect = 0.72 Identities = 29/31 (93%) Strand = Plus / Minus Query: 518 attacacatggccatgaagatcacattggtg 548 ||||| |||||||| |||||||||||||||| Sbjct: 2727344 attactcatggccacgaagatcacattggtg 2727314
>dbj|AK095511.1| Homo sapiens cDNA FLJ38192 fis, clone FCBBF1000270 Length = 3584 Score = 46.1 bits (23), Expect = 0.72 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1423 ttatcatgatgaactggaggaag 1445 ||||||||||||||||||||||| Sbjct: 2386 ttatcatgatgaactggaggaag 2364
>emb|AL592464.24| Human DNA sequence from clone RP11-740P5 on chromosome 1, complete sequence Length = 120028 Score = 46.1 bits (23), Expect = 0.72 Identities = 23/23 (100%) Strand = Plus / Plus Query: 37 ctccactccacgccctccctccc 59 ||||||||||||||||||||||| Sbjct: 37616 ctccactccacgccctccctccc 37638
>gb|AE014133.1| Streptococcus mutans UA159, complete genome Length = 2030921 Score = 46.1 bits (23), Expect = 0.72 Identities = 29/31 (93%) Strand = Plus / Minus Query: 518 attacacatggccatgaagatcacattggtg 548 ||||||||||| || |||||||||||||||| Sbjct: 351447 attacacatggacacgaagatcacattggtg 351417
>gb|AC020709.4|AC020709 Homo sapiens clone RP11-425F18, complete sequence Length = 184104 Score = 46.1 bits (23), Expect = 0.72 Identities = 23/23 (100%) Strand = Plus / Plus Query: 37 ctccactccacgccctccctccc 59 ||||||||||||||||||||||| Sbjct: 27820 ctccactccacgccctccctccc 27842
>gb|AC009487.3| Homo sapiens BAC clone RP11-334E15 from 2, complete sequence Length = 183666 Score = 46.1 bits (23), Expect = 0.72 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1423 ttatcatgatgaactggaggaag 1445 ||||||||||||||||||||||| Sbjct: 63376 ttatcatgatgaactggaggaag 63354
>dbj|AP003973.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-89C3, complete sequence Length = 189099 Score = 46.1 bits (23), Expect = 0.72 Identities = 23/23 (100%) Strand = Plus / Minus Query: 490 atggagccacaagattgaagcag 512 ||||||||||||||||||||||| Sbjct: 128471 atggagccacaagattgaagcag 128449
>gb|DQ158857.1| Bigelowiella natans nucleomorph chromosome 2, partial sequence Length = 134144 Score = 44.1 bits (22), Expect = 2.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 524 catggccatgaagatcacattggtgc 549 ||||||||||||||||| |||||||| Sbjct: 71644 catggccatgaagatcatattggtgc 71669
>ref|XM_759347.1| Theileria parva strain Muguga chromosome 4 hypothetical protein (TP04_0803) partial mRNA Length = 1451 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1609 gtcaaatgggtttatttcttta 1630 |||||||||||||||||||||| Sbjct: 1123 gtcaaatgggtttatttcttta 1102
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 44.1 bits (22), Expect = 2.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 79 ccgcgccgccgccatggtcgcgctcg 104 |||||||||||||||||||| ||||| Sbjct: 87868 ccgcgccgccgccatggtcgagctcg 87843
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 2.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 79 ccgcgccgccgccatggtcgcgctcg 104 |||||||||||||||||||| ||||| Sbjct: 21117838 ccgcgccgccgccatggtcgagctcg 21117863
>emb|AL603833.3| Human DNA sequence from clone RP11-453O12 on chromosome 6, complete sequence Length = 40111 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1985 attgtagttgcttcagagaacactacagta 2014 ||||||| |||| ||||||||||||||||| Sbjct: 39251 attgtagctgctacagagaacactacagta 39280
>emb|AL365222.24| Human DNA sequence from clone RP11-274E6 on chromosome 6, complete sequence Length = 166244 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1985 attgtagttgcttcagagaacactacagta 2014 ||||||| |||| ||||||||||||||||| Sbjct: 1140 attgtagctgctacagagaacactacagta 1169
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 44.1 bits (22), Expect = 2.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 524 catggccatgaagatcacattggtgc 549 ||||| |||||||||||||||||||| Sbjct: 1919079 catggtcatgaagatcacattggtgc 1919054
>gb|L43135.1|MTBPPQEF Methylobacterium extorquens putative proteases (pqqE, pqqF) and ORF219 genes, complete cds's, dioxygenase (ORF88') gene, 5' end of cds Length = 4256 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 351 gccttggggaaatcggcatgaa 372 |||||||||||||||||||||| Sbjct: 154 gccttggggaaatcggcatgaa 175 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 569,964,580 Number of extensions: 31704798 Number of successful extensions: 158004 Number of sequences better than 10.0: 45 Number of HSP's gapped: 157990 Number of HSP's successfully gapped: 124 Length of query: 2942 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2919 Effective length of database: 18,503,978,556 Effective search space: 54013113404964 Effective search space used: 54013113404964 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
