ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf44d01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073651:Os07g0107900 | 360 | 2e-99 | 2 | AK073520:Os07g0107900 | 360 | 2e-99 | 3 | AK110134: | 33 | 0.58 | 4 | AK121410:Os04g0574600 | 31 | 2.9 | 5 | AK103962:Os06g0554300 | 31 | 2.9 | 6 | AK070137:Os06g0554300 | 31 | 2.9 | 7 | Os02g0794300:Os02g0794300 | 31 | 3.8 | 8 | AK111180: | 31 | 3.8 | 9 | Os07g0152000:Os07g0152000 | 30 | 4.9 | 10 | Os05g0520300:Os05g0520300 | 30 | 4.9 | 11 | Os01g0899800:Os01g0899800 | 30 | 4.9 | 12 | AK099480:Os10g0148100 | 30 | 4.9 | 13 | AK059665:Os10g0148100 | 30 | 4.9 | 14 | AK110221: | 30 | 6.4 | 15 | AK121779:Os04g0132500 | 30 | 6.4 | 16 | AK112081:Os04g0132500 | 30 | 6.4 | 17 | AK110414: | 30 | 8.4 | 18 | AK110013: | 30 | 8.4 |
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>AK073651:Os07g0107900 | Length = 551 Score = 360 bits (925), Expect = 2e-99 Identities = 201/355 (56%), Positives = 244/355 (68%), Gaps = 13/355 (3%) Frame = +2 Query: 671 RDEDAVAVTMKG---------IDDYENVELKEMESPPSKDAHETGEILPVSCQSPEVEED 823 RDE A+A T KG ID +N +++MES P+KDA ET +ILP SP+ + D Sbjct: 199 RDEKAMADTSKGSSIEISHSIIDHEKNESVEKMESAPTKDADETQDILPAGSGSPDAQ-D 257 Query: 824 LELILRQKALENFRKFKGTVAMVGKTENNGTGKEVLTDNPRNTVTKFPEARSAVALFQRQ 1003 LELILRQKALENFRKF+G M GK + NGTGKEV+TD+P+++ TK EA S FQRQ Sbjct: 258 LELILRQKALENFRKFRGAALMAGKPQTNGTGKEVVTDSPKSSDTKIAEASSVDKPFQRQ 317 Query: 1004 GSNLGVGHSTRSPEFEDFENGRSPWKQETTHGG----RSPGILEAGDTCGPTQQQGSGIE 1171 S L V S SP EDF N +P KQE++ G SPG EAG T G T+Q+GS +E Sbjct: 318 RSGLSVNCSVGSPRLEDFGNHITPRKQESSAGKSVGVESPGTFEAGSTSGRTEQKGSSLE 377 Query: 1172 EIHSTSYITSHDGRNSGSVMQRVGSTPTSSGSIKQRLGISSVVSPVQARPRVRSVVSIPS 1351 S S I DGR+S S+M R+GS P SS S+ +RLG S+ V+ V PRVRSVVSIP+ Sbjct: 378 PTRSNSQIRLQDGRSSSSIMHRLGSPPRSSASVIRRLGSSAGVNYVNGNPRVRSVVSIPT 437 Query: 1352 REGLDGSTFTTTPTVCENPASVQSSSEVRHFPAEMSKLEGIDGDDRKTGEASAPDSSVLS 1531 +EGLD T TTP+ C+N V++ SEVRH P + +K+EG GD+R +GEASAP+ S LS Sbjct: 438 KEGLDSGTSITTPSACDNSPPVENISEVRHPPIDTNKIEGTKGDERNSGEASAPNVSTLS 497 Query: 1532 TDEGKSQAAGTEDKDGSQFEKRTFSRMHDGETVQVSYKVYIPTTSPRLARRKLQR 1696 T E K Q GTE KDGSQFEK+TFSRMH+GETVQVSYKVYIP SP LARRKLQR Sbjct: 498 TGEVKDQ-PGTEVKDGSQFEKKTFSRMHEGETVQVSYKVYIPKKSPALARRKLQR 551
>AK073520:Os07g0107900 | Length = 551 Score = 360 bits (925), Expect = 2e-99 Identities = 201/355 (56%), Positives = 244/355 (68%), Gaps = 13/355 (3%) Frame = +2 Query: 671 RDEDAVAVTMKG---------IDDYENVELKEMESPPSKDAHETGEILPVSCQSPEVEED 823 RDE A+A T KG ID +N +++MES P+KDA ET +ILP SP+ + D Sbjct: 199 RDEKAMADTSKGSSIEISHSIIDHEKNESVEKMESAPTKDADETQDILPAGSGSPDAQ-D 257 Query: 824 LELILRQKALENFRKFKGTVAMVGKTENNGTGKEVLTDNPRNTVTKFPEARSAVALFQRQ 1003 LELILRQKALENFRKF+G M GK + NGTGKEV+TD+P+++ TK EA S FQRQ Sbjct: 258 LELILRQKALENFRKFRGAALMAGKPQTNGTGKEVVTDSPKSSDTKIAEASSVDKPFQRQ 317 Query: 1004 GSNLGVGHSTRSPEFEDFENGRSPWKQETTHGG----RSPGILEAGDTCGPTQQQGSGIE 1171 S L V S SP EDF N +P KQE++ G SPG EAG T G T+Q+GS +E Sbjct: 318 RSGLSVNCSVGSPRLEDFGNHITPRKQESSAGKSVGVESPGTFEAGSTSGRTEQKGSSLE 377 Query: 1172 EIHSTSYITSHDGRNSGSVMQRVGSTPTSSGSIKQRLGISSVVSPVQARPRVRSVVSIPS 1351 S S I DGR+S S+M R+GS P SS S+ +RLG S+ V+ V PRVRSVVSIP+ Sbjct: 378 PTRSNSQIRLQDGRSSSSIMHRLGSPPRSSASVIRRLGSSAGVNYVNGNPRVRSVVSIPT 437 Query: 1352 REGLDGSTFTTTPTVCENPASVQSSSEVRHFPAEMSKLEGIDGDDRKTGEASAPDSSVLS 1531 +EGLD T TTP+ C+N V++ SEVRH P + +K+EG GD+R +GEASAP+ S LS Sbjct: 438 KEGLDSGTSITTPSACDNSPPVENISEVRHPPIDTNKIEGTKGDERNSGEASAPNVSTLS 497 Query: 1532 TDEGKSQAAGTEDKDGSQFEKRTFSRMHDGETVQVSYKVYIPTTSPRLARRKLQR 1696 T E K Q GTE KDGSQFEK+TFSRMH+GETVQVSYKVYIP SP LARRKLQR Sbjct: 498 TGEVKDQ-PGTEVKDGSQFEKKTFSRMHEGETVQVSYKVYIPKKSPALARRKLQR 551
>AK110134: | Length = 944 Score = 33.5 bits (75), Expect = 0.58 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -1 Query: 728 PHSHNRQSPSW*QQPRPHPYKHPCPCLH 645 PH H+ Q+P Q PHP+ HP P H Sbjct: 189 PHPHHPQNPQMPPQHHPHPHPHPHPHPH 216 Score = 30.0 bits (66), Expect = 6.4 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = -1 Query: 743 PSPSAPHSHNRQSPSW*QQPRPHPYKHPCPCLHH 642 P PH H P P PHP+ HP HH Sbjct: 200 PPQHHPHPHPHPHP----HPHPHPHPHPSQQQHH 229
>AK121410:Os04g0574600 | Length = 666 Score = 31.2 bits (69), Expect = 2.9 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = +2 Query: 1499 EASAPDSSVLSTDEGKSQAAGTEDKDGSQFEKRTFSRMHDGETVQV 1636 E S+ S + G + G KD +F K+ + R H G+TV + Sbjct: 120 EVSSVSGSEDELENGPASDRGLSAKDKGEFRKKLYFRCHSGDTVSI 165
>AK103962:Os06g0554300 | Length = 422 Score = 31.2 bits (69), Expect = 2.9 Identities = 57/269 (21%), Positives = 92/269 (34%), Gaps = 24/269 (8%) Frame = +2 Query: 893 GKTENNGTGKEVLTDNPRNTVTKFPEARSAVALFQRQGSNLG--VGHSTRSPEFEDFENG 1066 G TE N ++ T++ + E+ S+ A + + + G + S E E Sbjct: 131 GNTEANSNDEDGTTNHSEGEKSD-AESNSSDAESKGEDHSTGDDMPQSNTVLEESSAETN 189 Query: 1067 RSPWKQETTHGGRSPGILEAGDTCGPTQQQGSGIEEIHSTSYITSHDGRNSGSVMQRVGS 1246 R P +E HG S + + GS EE + S + S S + G+ Sbjct: 190 RMP-HEEVAHGDES-----TNEDQSNVKSDGSNEEEAEKKEAVDSQNASESLSDDAKGGT 243 Query: 1247 TPT-SSGSIKQRLGISSVVSPVQARPRVRSVVSIPS--REGLDGSTFTTTPTVCENPASV 1417 SSG++ G ++PS E +TT + Sbjct: 244 DDEHSSGTLPDETG------------------NLPSGQNENSQSDATSTTSDASSEAVHI 285 Query: 1418 QSSSEVRHFPAEMSKLEGI-DGDDRKTGEASAPDSSVLSTDEG----------------- 1543 ++ SE + +K G GDD K A DS+ +DEG Sbjct: 286 ETGSENE----DAAKSSGTASGDDDKGSANEASDSNETKSDEGNVAAEVSNDQAANTEAG 341 Query: 1544 -KSQAAGTEDKDGSQFEKRTFSRMHDGET 1627 +A+ E +GS E + +DG T Sbjct: 342 NSQEASAAEAANGSSEETKPVENQNDGNT 370
>AK070137:Os06g0554300 | Length = 422 Score = 31.2 bits (69), Expect = 2.9 Identities = 57/269 (21%), Positives = 92/269 (34%), Gaps = 24/269 (8%) Frame = +2 Query: 893 GKTENNGTGKEVLTDNPRNTVTKFPEARSAVALFQRQGSNLG--VGHSTRSPEFEDFENG 1066 G TE N ++ T++ + E+ S+ A + + + G + S E E Sbjct: 131 GNTEANSNDEDGTTNHSEGEKSD-AESNSSDAESKGEDHSTGDDMPQSNTVLEESSAETN 189 Query: 1067 RSPWKQETTHGGRSPGILEAGDTCGPTQQQGSGIEEIHSTSYITSHDGRNSGSVMQRVGS 1246 R P +E HG S + + GS EE + S + S S + G+ Sbjct: 190 RMP-HEEVAHGDES-----TNEDQSNVKSDGSNEEEAEKKEAVDSQNASESLSDDAKGGT 243 Query: 1247 TPT-SSGSIKQRLGISSVVSPVQARPRVRSVVSIPS--REGLDGSTFTTTPTVCENPASV 1417 SSG++ G ++PS E +TT + Sbjct: 244 DDEHSSGTLPDETG------------------NLPSGQNENSQSDATSTTSDASSEAVHI 285 Query: 1418 QSSSEVRHFPAEMSKLEGI-DGDDRKTGEASAPDSSVLSTDEG----------------- 1543 ++ SE + +K G GDD K A DS+ +DEG Sbjct: 286 ETGSENE----DAAKSSGTASGDDDKGSANEASDSNETKSDEGNVAAEVSNDQAANTEAG 341 Query: 1544 -KSQAAGTEDKDGSQFEKRTFSRMHDGET 1627 +A+ E +GS E + +DG T Sbjct: 342 NSQEASAAEAANGSSEETKPVENQNDGNT 370
>Os02g0794300:Os02g0794300 | Length = 1369 Score = 30.8 bits (68), Expect = 3.8 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 10/136 (7%) Frame = +2 Query: 1208 GRNSGSVMQRVGSTPTSSGSIKQRLGISSVVSPVQAR-----PRVRSVVSIPSREGLDGS 1372 GR+S + + GS S S ++R S +SP +R R+ + S S S Sbjct: 59 GRSSAAAAEAAGSQARRSQSTERRPATPSRLSPGGSRAAAPSSRISAPTSPSSAPSSPSS 118 Query: 1373 TFTTTPTVCENPASVQSSSEVRHFPAEMSKLEGIDGDDRKTG-----EASAPDSSVLSTD 1537 + +++ T + + +S S R + +G+ R EA S+ S D Sbjct: 119 SSSSSSTPVRDAVAAESQSAPRRLAGGRAPPDGLWPSMRSLSSSLQLEAKGKRSNGGSAD 178 Query: 1538 EGKSQAAGTEDKDGSQ 1585 + K++ AG + S+ Sbjct: 179 QAKARDAGDRKRSPSR 194
>AK111180: | Length = 935 Score = 30.8 bits (68), Expect = 3.8 Identities = 40/178 (22%), Positives = 62/178 (34%), Gaps = 9/178 (5%) Frame = +2 Query: 1085 ETTHGGRSPGILEAGDTCGPTQQQGSGIEEIHSTSYITSHDGRNSGSVMQRVGSTPTSS- 1261 E GG + +A Q S E S T +GR++ S + Sbjct: 144 EAQQGGGAEAAADADMNGVQEQATASSANEKEEESTSTGSNGRDTAHAKGAPASKELAQL 203 Query: 1262 --GSIKQRLGISSVVSPVQAR------PRVRSVVSIPSREGLDGSTFTTTPTVCENPASV 1417 GS G + P ++R P ++ V P E D S+ PT + Sbjct: 204 GLGSFGD--GAEDALGPRRSRRGPGASPDPKARVPKPEPE-TDASSLQGIPTDSAEADDI 260 Query: 1418 QSSSEVRHFPAEMSKLEGIDGDDRKTGEASAPDSSVLSTDEGKSQAAGTEDKDGSQFE 1591 ++ V + G DD+K +ASA + +EG + A E +GS E Sbjct: 261 NDATAVNQDAQASADAVGAADDDQKAADASAVPQEAMQLEEGAADAK-VEADNGSGLE 317
>Os07g0152000:Os07g0152000 | Length = 445 Score = 30.4 bits (67), Expect = 4.9 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -1 Query: 752 VGFPSPSAPHSHNRQSPSW*QQPRPHPYKHPCPCLHHV 639 +GF + +APH+ R+S + PH + P P L ++ Sbjct: 261 IGFAAAAAPHTQPRKSAAGHHSAMPHTFASPAPHLANI 298
>Os05g0520300:Os05g0520300 | Length = 386 Score = 30.4 bits (67), Expect = 4.9 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = +2 Query: 1469 GIDGDDRKTGEASAPDSSVLSTDEGKSQAAGTEDKDGS 1582 G GDDR G ASA S+V + D + +G D D S Sbjct: 64 GGGGDDRAAGNASADSSTVTAVDSCSNSFSGLADGDFS 101
>Os01g0899800:Os01g0899800 | Length = 692 Score = 30.4 bits (67), Expect = 4.9 Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 15/127 (11%) Frame = +2 Query: 1040 PEFEDFENGRSPWKQETTHGGRSPGILEAGDTC---------------GPTQQQGSGIEE 1174 P+ EDF G S +Q+ HGG+ I + C + Q + Sbjct: 67 PKLEDFLGGISFSEQQHHHGGKGGVIPSSAAACYASSGSSVGYLYPPPSSSSLQFADSVM 126 Query: 1175 IHSTSYITSHDGRNSGSVMQRVGSTPTSSGSIKQRLGISSVVSPVQARPRVRSVVSIPSR 1354 + ++S + +HDG + G + V + ++ S +G+S + + ++++P + ++ Sbjct: 127 VATSSPVVAHDGVSGGGM---VSAAAAAAASGNGGIGLSMIKNWLRSQPAPQPAQALSLS 183 Query: 1355 EGLDGST 1375 + G+T Sbjct: 184 MNMAGTT 190
>AK099480:Os10g0148100 | Length = 271 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 743 PSPSAPHSHNRQSPSW*QQPRPHPYKHPCPCLHH 642 PSP AP ++++ PS+ P P Y +P P H Sbjct: 173 PSPPAPAAYHKPPPSY-THPAPPVYSYPTPAYSH 205
>AK059665:Os10g0148100 | Length = 271 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 743 PSPSAPHSHNRQSPSW*QQPRPHPYKHPCPCLHH 642 PSP AP ++++ PS+ P P Y +P P H Sbjct: 173 PSPPAPAAYHKPPPSY-THPAPPVYSYPTPAYSH 205
>AK110221: | Length = 710 Score = 30.0 bits (66), Expect = 6.4 Identities = 40/199 (20%), Positives = 68/199 (34%), Gaps = 9/199 (4%) Frame = +2 Query: 1097 GGRSPGILEAGDTCGPTQQQGSGIEE---------IHSTSYITSHDGRNSGSVMQRVGST 1249 G S ++G Q SG + S++ ++ S + S Sbjct: 38 GSISGSASDSGSQSSAKSQSDSGADSSAKLGADSGAQSSAQSSAQSSAQSSAQSSAQSSA 97 Query: 1250 PTSSGSIKQRLGISSVVSPVQARPRVRSVVSIPSREGLDGSTFTTTPTVCENPASVQSSS 1429 +S+ S Q SS S +A + S S S D ++ +++ + N +S SS Sbjct: 98 QSSAQSSAQSSAQSSAQSSSEASSQASSESSAHSSSQSDANSSSSSSS--SNSSSQSSSQ 155 Query: 1430 EVRHFPAEMSKLEGIDGDDRKTGEASAPDSSVLSTDEGKSQAAGTEDKDGSQFEKRTFSR 1609 H +E S + + A++ +S +D A G+Q + S Sbjct: 156 ASSHSSSESSASSSSHAESQSGSSANSSANSDAGSDANAGSDAKGSSDSGAQSNHASGSS 215 Query: 1610 MHDGETVQVSYKVYIPTTS 1666 G T S TTS Sbjct: 216 SSAGPTSTASASGTAATTS 234
>AK121779:Os04g0132500 | Length = 1147 Score = 30.0 bits (66), Expect = 6.4 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -3 Query: 1029 EWPTPRLLPCLWKRATADLASGNFVTV-FRGLSVNTSFPVPLFSVLPTMATV 877 +W PC W D A+G+ +V F+ + + P + + LP++A++ Sbjct: 53 DWSPSASSPCKWSHVGCDAATGSVTSVTFQSVHLAAPLPPGICAALPSLASL 104
>AK112081:Os04g0132500 | Length = 1147 Score = 30.0 bits (66), Expect = 6.4 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -3 Query: 1029 EWPTPRLLPCLWKRATADLASGNFVTV-FRGLSVNTSFPVPLFSVLPTMATV 877 +W PC W D A+G+ +V F+ + + P + + LP++A++ Sbjct: 53 DWSPSASSPCKWSHVGCDAATGSVTSVTFQSVHLAAPLPPGICAALPSLASL 104
>AK110414: | Length = 652 Score = 29.6 bits (65), Expect = 8.4 Identities = 31/108 (28%), Positives = 39/108 (36%), Gaps = 8/108 (7%) Frame = +2 Query: 965 PEARSAVALFQRQGSNLGVGHSTRSPEFEDFENGRSPWKQETTHGGRSPGILE-AGDTCG 1141 P + A +Q+ GS L T PE E T+HG S G E A D G Sbjct: 483 PTSSRPEAFYQQPGSYLHQEQETPIPEDEQ--------SYVTSHGDVSDGEQEYAIDESG 534 Query: 1142 PTQQQGSG-------IEEIHSTSYITSHDGRNSGSVMQRVGSTPTSSG 1264 + G + S Y D R +QR G+ TSSG Sbjct: 535 QYMRDADGRRIPFRSVRSPASDEYDVQEDRRRELEHLQRYGTAATSSG 582
>AK110013: | Length = 733 Score = 29.6 bits (65), Expect = 8.4 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 3/116 (2%) Frame = +2 Query: 1244 STPTSSGSIKQRLGISSVVSPVQARPRVRSVVSIPSREGL-DGSTFTTTPTV--CENPAS 1414 ST S G ++R +S SP +A ++P DGST+ PTV E Sbjct: 108 STTHSEGRERRRSDAASQRSPARAE-------AVPDAAPAGDGSTYHDVPTVDVTEPDGK 160 Query: 1415 VQSSSEVRHFPAEMSKLEGIDGDDRKTGEASAPDSSVLSTDEGKSQAAGTEDKDGS 1582 + + + D DD+ T +A + + EG+ +A G+ K+G+ Sbjct: 161 APGDRDEDEDDEDEDDEDDDDDDDKATTDAGSASEA-----EGEDKAEGSSAKEGA 211 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 47,342,103 Number of extensions: 1073656 Number of successful extensions: 3156 Number of sequences better than 10.0: 18 Number of HSP's gapped: 3133 Number of HSP's successfully gapped: 19 Length of query: 676 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 569 Effective length of database: 11,115,468 Effective search space: 6324701292 Effective search space used: 6324701292 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
