>LOC_Os07g01720:12007.t00070:unspliced-genomic expressed protein|
Length = 2937
Score = 186 bits (401), Expect(5) = e-105
Identities = 82/152 (53%), Positives = 104/152 (68%)
Frame = +2 / +2
Query: 1097 GGRSPGILEAGDTCGPTQQQGSGIEEIHSTSYITSHDGRNSGSVMQRVGSTPTSSGSIKQ 1276
G SPG EAG T G T+Q+GS +E S S I DGR+S S+M R+GS P SS S+ +
Sbjct: 1784 GVESPGTFEAGSTSGRTEQKGSSLEPTRSNSQIRLQDGRSSSSIMHRLGSPPRSSASVIR 1963
Query: 1277 RLGISSVVSPVQARPRVRSVVSIPSREGLDGSTFTTTPTVCENPASVQSSSEVRHFPAEM 1456
RLG S+ V+ V PRVRSVVSIP++EGLD T TTP+ C+N V++ SEVRH P +
Sbjct: 1964 RLGSSAGVNYVNGNPRVRSVVSIPTKEGLDSGTSITTPSACDNSPPVENISEVRHPPIDT 2143
Query: 1457 SKLEGIDGDDRKTGEASAPDSSVLSTDEGKSQ 1552
+K+EG GD+R +GEASAP+ S LST E K Q
Sbjct: 2144 NKIEGTKGDERNSGEASAPNVSTLSTGEVKDQ 2239
Score = 123 bits (264), Expect(5) = e-105
Identities = 55/94 (58%), Positives = 66/94 (70%)
Frame = +2 / +2
Query: 818 EDLELILRQKALENFRKFKGTVAMVGKTENNGTGKEVLTDNPRNTVTKFPEARSAVALFQ 997
+DLELILRQKALENFRKF+G M GK + NGTGKEV+TD+P+++ TK EA S FQ
Sbjct: 1493 QDLELILRQKALENFRKFRGAALMAGKPQTNGTGKEVVTDSPKSSDTKIAEASSVDKPFQ 1672
Query: 998 RQGSNLGVGHSTRSPEFEDFENGRSPWKQETTHG 1099
RQ S L V S SP EDF N +P KQE++ G
Sbjct: 1673 RQRSGLSVNCSVGSPRLEDFGNHITPRKQESSAG 1774
Score = 61.6 bits (128), Expect(5) = e-105
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +2 / +2
Query: 1559 GTEDKDGSQFEKRTFSRMHDGETVQVSYK 1645
GTE KDGSQFEK+TFSRMH+GETVQVS K
Sbjct: 2243 GTEVKDGSQFEKKTFSRMHEGETVQVSKK 2329
Score = 45.5 bits (93), Expect(5) = e-105
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 1634 VSYKVYIPTTSPRLARRKLQR*RHRMDFHLVVINLV 1741
VSYKVYIP SP LARRKLQR* + +++I LV
Sbjct: 2399 VSYKVYIPKKSPALARRKLQR*SCQDCHQILIICLV 2506
Score = 44.1 bits (90), Expect(5) = e-105
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +2 / +2
Query: 683 AVAVTMKGIDDYENVELKEMESPPSKDAHETGEILPVSCQSPEVEE 820
++ ++ ID +N +++MES P+KDA ET +ILP SP+ ++
Sbjct: 1361 SIEISHSIIDHEKNESVEKMESAPTKDADETQDILPAGSGSPDAQD 1498
Score = 124 bits (265), Expect(7) = 9e-90
Identities = 59/121 (48%), Positives = 74/121 (61%)
Frame = -2 / -3
Query: 1552 LALALISRQNRAVRS*SFTGLSIISIDSFKLAHFSREMSDFTTALDRGRILTNCRGCRKC 1373
L L L S Q+R +RS*SFT +S I SF +R M DFT +RGRI+T+ RG +C
Sbjct: 2239 LILDLTS*QSRNIRS*SFT*ISFIPFSSFNFVSINRRMPDFTNVFNRGRIITSTRGSDRC 2060
Query: 1372 TAIKPFP*GYTHN*SNSGSCLHRTHH*ADA*PLLYTTRTRRGASHPLHYTTTIPTIM*SD 1193
T IKPF GY HN*SNSG +H H A +*P + R AS P+HY T PTI+* +
Sbjct: 2059 TTIKPFLSGYAHN*SNSGISIHIIHPCAAS*PSNHAGRAPWRASQPMHYAGTTPTIL*PN 1880
Query: 1192 I 1190
+
Sbjct: 1879 L 1877
Score = 120 bits (256), Expect(7) = 9e-90
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = -3 / -1
Query: 1104 LPP*VVSCFQGLLPFSKSSNSGDRVEWPTPRLLPCLWKRATADLASGNFVTVFRGLSVNT 925
L P +SCF+G++ F KSSN GD E T R L CL K + +LAS FV++ GLSV T
Sbjct: 1779 LLPAELSCFRGVIWFPKSSNLGDPTEQFTERPLLCL*KGLSTELASAIFVSLLLGLSVTT 1600
Query: 924 SFPVPLFSVLPTMATVPLNFLKFSRAFCLRMSSKS 820
SFPVPL LP M+ PLNFLKFSRAFCLR+SS+S
Sbjct: 1599 SFPVPLVCGLPAMSAAPLNFLKFSRAFCLRISSRS 1495
Score = 57.0 bits (118), Expect(7) = 9e-90
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -3 / -1
Query: 1638 LTCTVSPSCILEKVLFSN*DPSLSSVP 1558
LTCTVSPSCILE V FSN*+PSL+SVP
Sbjct: 2322 LTCTVSPSCILENVFFSN*EPSLTSVP 2242
Score = 47.3 bits (97), Expect(7) = 9e-90
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -1 / -2
Query: 173 ACRGRIGSSWTWPHPRRR 120
ACRGRIG+SWTWPHP ++
Sbjct: 806 ACRGRIGASWTWPHPNKK 753
Score = 44.1 bits (90), Expect(7) = 9e-90
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = -3 / -1
Query: 1740 TRLMTTRWKSIRCLQRCSFLLASRGLVVGM*TL*LT 1633
TR + W LQRCSFLLAS GL GM*TL*LT
Sbjct: 2505 TRQIMRIW*QSWQLQRCSFLLASAGLFFGM*TL*LT 2398
Score = 42.8 bits (87), Expect(7) = 9e-90
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = -2 / -3
Query: 820 LLNLWTLATNR*DLACFMSIFGRWAFHLLQLHILIIVN 707
+L++ T+R*D+ CF+SI GR A HLL IL+++N
Sbjct: 1498 ILSIRASTTSR*DVLCFISILGRSALHLLNGLILLMIN 1385
Score = 31.3 bits (62), Expect(7) = 9e-90
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -3
Query: 131 PRRRPSWRIC 102
PRRRPSWRIC
Sbjct: 523 PRRRPSWRIC 494
Score = 119 bits (255), Expect(5) = 1e-64
Identities = 69/153 (45%), Positives = 87/153 (56%)
Frame = +3 / +3
Query: 1089 RLMGVDHLGYXXXXXXXXXXXXXEAE*KRFIQLLISLHMMVGIVVV*CKGWEAPRRVLVV 1268
R + ++HL + EA * Q+ + MVG+V *C GWEA + L
Sbjct: 1776 RALALNHLEHLRPAAPAGELSRKEAV*NLLDQIHRLGYRMVGVVPA*CIGWEALQGALPA 1955
Query: 1269 *SKG*ASAQW*VLCKQDPELDQL*VYPQGKGLMAVHLRQPLQFVRILPLSKAVVKSDISL 1448
* +G* +AQ *++ + PELDQL* YP KGL+ VHL PL V ILPL K +VKS I L
Sbjct: 1956 *FEG*EAAQG*IM*MEIPELDQL*AYPLRKGLIVVHLSLPLVLVIILPLLKTLVKSGILL 2135
Query: 1449 LK*ASLKESMEMIERPVKLQLLTALFCRLMRAR 1547
L LKE M E VKLQLL L C+L+R+R
Sbjct: 2136 LILTKLKELKGMKEIQVKLQLLMFLLCQLVRSR 2234
Score = 83.5 bits (176), Expect(5) = 1e-64
Identities = 49/93 (52%), Positives = 56/93 (60%)
Frame = +1 / +1
Query: 820 GFGAHSQAESS*ELQEV*GNRGHGRQDRKQWYREGSINR*PPEYCHKIS*SKVCCCPFPE 999
G GA SQAESS*ELQ++* + HGRQ QWYREGS N *P E H+ *S+ C F E
Sbjct: 1495 GSGADSQAESS*ELQKI*RSSAHGRQAANQWYREGSGNG*PQEQ*HENC*SEFC*QTFSE 1674
Query: 1000 AGKQSWSWPLYSIT*I*RF*EW*KSLEAGNDSW 1098
A K S+S L I *I F E S +AG W
Sbjct: 1675 AKKWSFSELLCWIP*IGGFREPYNSSKAGKLRW 1773
Score = 42.3 bits (86), Expect(5) = 1e-64
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +3 / +3
Query: 720 RMWS*RRWKAHLPKMLMKQARSYLLVAKVQRLR 818
RM RRW+A LP+MLMK SYLLV + LR
Sbjct: 1398 RMSPLRRWRALLPRMLMKHKTSYLLVVEALMLR 1496
Score = 40.9 bits (83), Expect(5) = 1e-64
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1 / +1
Query: 1633 GQL*SLHTNDEPATCKKEAAALKASNGLPSSRH 1731
GQL SLHT ++ +TCK+EA ALK P+S +
Sbjct: 2398 GQLQSLHTKEKSSTCKEEATALKLPRLSPNSHY 2496
Score = 37.3 bits (75), Expect(5) = 1e-64
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +1 / +1
Query: 1561 DRGQRWVSV*EEDFL*DA*WRDSAGQ 1638
D GQRW SV*E+D L*+A* R+ AG+
Sbjct: 2245 D*GQRWFSV*EKDIL*NA*GRNCAGE 2322
Score = 80.8 bits (170), Expect(6) = 5e-53
Identities = 43/90 (47%), Positives = 55/90 (61%)
Frame = -2 / -3
Query: 1087 FLLPRTSTILKIFKFR*SSRVANSKIASLPLEKGNSRPCFRKFCDSIPGVIC*YFLPCTI 908
FLL R+ + +I + R S+R + K SLPL++ +R F F + G I +FLPCTI
Sbjct: 1762 FLLSRSYMVPEILQSRGSNRAVH*KTTSLPLKRFVNRTRFSNFRVTALGAIRYHFLPCTI 1583
Query: 907 VFCLAYHGHGSLKLPEVLKSFLPENELQIL 818
LA H S K EVLKSFLPEN+LQIL
Sbjct: 1582 GLRLACHERCSSKFSEVLKSFLPENQLQIL 1493
Score = 66.6 bits (139), Expect(6) = 5e-53
Identities = 31/64 (48%), Positives = 35/64 (54%)
Frame = -3 / -1
Query: 1287 MPNLCFILPELVGVLPTLCITLPLFLPSCXXXXXXXXXXXIPLPCC*VGPQVSPASSIPG 1108
+PNL L EL+G LP LCI L L LPSC LP C V P V PAS++PG
Sbjct: 1974 LPNLRITLAELLGGLPNLCIMLELLLPSCSLICEFDRVGSRLLPFCSVRPLVLPASNVPG 1795
Query: 1107 DLPP 1096
D P
Sbjct: 1794 DSTP 1783
Score = 47.3 bits (97), Expect(6) = 5e-53
Identities = 30/68 (44%), Positives = 32/68 (47%)
Frame = -3 / -1
Query: 1545 LPSSVDKTELSGAEASPVFXXXXXXXXXXXXSAGKCLTSLLLWTEAGFSQTXXXXXXVLP 1366
L S VDK E GAEASP F S G CLTSL+ T SQ V
Sbjct: 2232 LTSPVDKVETLGAEASPEFLSSPLVPSILLVSIGGCLTSLMFSTGGELSQALGVVIDVPL 2053
Query: 1365 SSPSLEGI 1342
SSPSL G+
Sbjct: 2052 SSPSLVGM 2029
Score = 40.0 bits (81), Expect(6) = 5e-53
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -2 / -3
Query: 1645 FIADLHCLSIMHPRESPLLKLRPIFVLGP 1559
F+A LH S+MH RE LKLR IF L P
Sbjct: 2329 FLAHLHSFSLMHSRECLFLKLRTIFDLSP 2243
Score = 36.8 bits (74), Expect(6) = 5e-53
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2 / -3
Query: 1741 DEINDD*MEVHSMPSALQLPSCKSRARRWYVDFIADL 1631
D+ N++ + SAL LP CK WYVDF+ DL
Sbjct: 2506 DKTNNENLVTILATSAL*LPPCKCWTFLWYVDFVTDL 2396
Score = 29.9 bits (59), Expect(6) = 5e-53
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1 / -2
Query: 818 PQPLDFGN*QVRSRLFHEHLWKVGFPSPSAPHSHNRQ 708
P+ F QVR +FH+H W PS HS + Q
Sbjct: 1496 PEHQGFHYQQVRCLVFHQHPW*ERSPSSQRTHSSHDQ 1386
Score = 93.2 bits (197), Expect(4) = 4e-43
Identities = 51/125 (40%), Positives = 73/125 (58%)
Frame = +3 / +3
Query: 714 IMRMWS*RRWKAHLPKMLMKQARSYLLVAKVQRLRRIWSSFSGRKLLRTSGSLREPWPW* 893
IMR S R L ++ + ++ L+ + RIWS FSGRKLLRTS +L E W
Sbjct: 1389 IMRRMSPLRRWRALLPRMLMKHKTSYLLVVEALMLRIWS*FSGRKLLRTSENLEEQRSWQ 1568
Query: 894 ARQKTMVQGRKY*QITPGILSQNFLKQGLLLPFSRGREAILELATLLDHLNLKILRMVEV 1073
A +K MVQGRK+*+I P +++ LK+ LL RG+E + + LLD L+ +I + +
Sbjct: 1569 ASRKPMVQGRKW*RIAPRAVTRKLLKRVLLTNLFRGKEVVFQ*TALLDPLDWRISGTI*L 1748
Query: 1074 LGSRK 1088
L SRK
Sbjct: 1749 LESRK 1763
Score = 90.4 bits (191), Expect(4) = 4e-43
Identities = 72/152 (47%), Positives = 83/152 (54%)
Frame = +1 / +1
Query: 1090 DSWG*ITWDTRGW*YLWSYSAAGKRNRRDSFNFLYHFT*W*E*W*CNAKGGKHPDEFW*Y 1269
+ W *ITW+ G + + A K++R S F T W*E*+ NA GK E
Sbjct: 1777 ERWR*ITWNI*GRQHQRAN*AERKQSRTYSIKFTD*ATGW*E*FQHNA*VGKPSKELCQR 1956
Query: 1270 KAKVRHQLSGESCASKTQS*ISCEYTLKGRA*WQYIYDNPYSL*ESCLCPKQ**SQTFPC 1449
+KVR Q GE C K+QS*ISCE+T GRA* YIY P L* C K **SQ
Sbjct: 1957 DSKVRKQRRGELCEWKSQS*ISCEHTH*GRA**WYIYHYP*CL**FSPC*KH**SQASSY 2136
Query: 1450 *NEQA*RNRWR**KDR*SFSS*QLCFVD**GQ 1545
* Q *RN * K R*SFSS* FV+ *GQ
Sbjct: 2137 *Y*QN*RN*RG*KKFR*SFSS*CFYFVNW*GQ 2232
Score = 34.5 bits (69), Expect(4) = 4e-43
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3 / +3
Query: 1632 RSAIKSTYQRRARDLQEGSCSAE 1700
RS KSTYQR+ + LQ GS SAE
Sbjct: 2397 RSVTKSTYQRKVQHLQGGSYSAE 2465
Score = 29.5 bits (58), Expect(4) = 4e-43
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 433 RLREVSEPTAQEPLQRY*EEE 495
R EV EPTA EPL R *EEE
Sbjct: 1021 RF*EVGEPTA*EPL*RC*EEE 1083
Score = 97.7 bits (207), Expect(5) = 1e-32
Identities = 54/105 (51%), Positives = 66/105 (62%)
Frame = -1 / -2
Query: 1541 PHQSTKQSCQELKLHRSFYHLHRFLQACSFQQGNV*LHYCFGQRQDSHKL*GLS*MYCHQ 1362
PHQ TK ELKLH +F+H FLQ C +Q + *LH CF Q ++ HK *G *MY +Q
Sbjct: 2228 PHQLTK*KH*ELKLHLNFFHPL*FLQFC*YQ*EDA*LH*CFQQGENYHKH*G***MYHYQ 2049
Query: 1361 ALPLRVYSQLI*LWVLLAQDSPLS*CLTFALYYQNSSGCFPPFAL 1227
ALP V SQLI*LW + +SPL LTF +Q+S FP +AL
Sbjct: 2048 ALP*WVCSQLI*LWDFHSHNSPLRCFLTFESRWQSSLEGFPTYAL 1914
Score = 53.8 bits (111), Expect(5) = 1e-32
Identities = 28/43 (65%), Positives = 30/43 (69%)
Frame = -1 / -2
Query: 947 SGGYLLILPSLYHCFLSCLPWPRFP*TS*SSQELSA*E*APNP 819
S GY L LPSLYH F +CLP * *SSQELSA*E AP+P
Sbjct: 1622 SWGYPLPLPSLYHWFAACLP*ALLL*IF*SSQELSA*ESAPDP 1494
Score = 32.7 bits (65), Expect(5) = 1e-32
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -1 / -2
Query: 1634 PALSLHHAS*RKSSSQTETHLCPRS 1560
PA L HA *R S SQTE HL P+S
Sbjct: 2318 PAQFLPHAF*RMSFSQTENHL*PQS 2244
Score = 24.0 bits (46), Expect(5) = 1e-32
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -2
Query: 1679 LQVAGSSLVCRLYS*P 1632
LQV SLVCRL +*P
Sbjct: 2444 LQVLDFSLVCRLCN*P 2397
Score = 23.5 bits (45), Expect(5) = 1e-32
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3 / -1
Query: 828 SKSSSTSGLWQLTGKISPVS*ASLEGGL 745
S S SGL GK+S VS ASL G L
Sbjct: 1506 SSRS*ASGLPLPAGKMSCVSSASLVGAL 1423
>LOC_Os04g15980:12004.t01358:unspliced-genomic transposon protein, putative, unclassified|
Length = 3511
Score = 28.1 bits (55), Expect(4) = 0.75
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -1 / +1
Query: 128 RRRPSWRICXXXXXXXXXXXXXXGHKGVFAAGRC 27
RRRPSW +C + G AA RC
Sbjct: 3334 RRRPSWGLCWTGNGGRALACCCSTYSGSSAAWRC 3435
Score = 24.4 bits (47), Expect(4) = 0.75
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / +1
Query: 167 RGRIGSSWTW 138
RGR G WTW
Sbjct: 2677 RGRSGGGWTW 2706
Score = 23.5 bits (45), Expect(4) = 0.75
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / +1
Query: 1248 VLPTLCITLPL 1216
V P LC+TLPL
Sbjct: 1285 VAPCLCVTLPL 1317
Score = 23.5 bits (45), Expect(4) = 0.75
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3 / +3
Query: 879 VPLNFLKFSRAFCLRMSSKSSSTSGLWQ 796
VPL L +A L + + + T G+WQ
Sbjct: 1809 VPLLLLMVPQALALPLRTFTVHTRGMWQ 1892
>LOC_Os06g28524:12006.t04900:unspliced-genomic expressed protein|
Length = 1287
Score = 32.7 bits (65), Expect = 9.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2 / +2
Query: 1478 GDDRKTGEASAPDSSVLSTDEGKSQAAGTEDKDG 1579
GD+ + GE+SAP S +L ++ G S G+ + G
Sbjct: 128 GDESRGGESSAPPSPLLPSNPGGSGGGGSATRKG 229
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 662,778,444
Number of extensions: 10671416
Number of successful extensions: 48729
Number of sequences better than 10.0: 35
Length of query: 676
Length of database: 55,613,886
Length adjustment: 52
Effective length of query: 624
Effective length of database: 52,687,430
Effective search space: 32876956320
Effective search space used: 32876956320
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)