>LOC_Os04g55570:12004.t05029:unspliced-genomic expressed protein|
          Length = 5531
 Score = 31.8 bits (63), Expect(2) = 0.60
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3 / +2

                                               
Query: 588  FSLAWSVQFKVFIFLRRKTTGWRQFTVKIQLLFCF 692
            + L+W    KVFI LR+ + G+  F+ ++Q+L  F
Sbjct: 1301 YLLSWHTPAKVFIKLRKCSKGFLCFSPRVQILVFF 1405



 Score = 27.2 bits (53), Expect(2) = 0.60
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3 / +1

                                      
Query: 903  SFQDS*ENRRCLFCLHSRFNFPGRYL 980
            SF   *  R+C  C+H  +N  G YL
Sbjct: 1543 SFLIE*HPRKCSVCIHLLYNLVGIYL 1620

>LOC_Os08g39550:12008.t03687:unspliced-genomic polygalacturonase inhibitor 2 precursor, putative, expressed|
          Length = 1673

 Score = 25.8 bits (50), Expect(3) = 1.3
 Identities = 10/41 (24%), Positives = 16/41 (39%)
 Frame = -1 / +3

                                                    
Query: 293 QISHDPKPKQQGSEEQGTNINGTDEENPPGLARPRNRRTEH 171
           +++  P+P QQ +  +     G      P  ARP      H
Sbjct: 615 RVAEAPRPHQQPAHRRDPGRRGRPHHAQPRAARPEQAHRRH 737



 Score = 24.4 bits (47), Expect(3) = 1.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1 / +2

                                           
Query: 485 LHLHASIPTKLVIRAKHNLHFSSQP*IKSSRP 390
           L L +++PT+   R  H+L   + P  +SS P
Sbjct: 2   LSLCSAVPTRAETRRWHHLPLQAPPRRRSSSP 97



 Score = 24.4 bits (47), Expect(3) = 1.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -2 / +2

                                        
Query: 178  RSTTTRTECSPGIQADKEQRKGSARSKP 95
            RSTT+    SP   A    R  SAR  P
Sbjct: 1112 RSTTSTPPPSPATAASAAARSASARDVP 1195

>LOC_Os05g51090:12005.t04539:unspliced-genomic seven-transmembrane-domain protein 1, putative, expressed|
          Length = 1847

 Score = 34.5 bits (69), Expect = 1.5
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -2 / -3

                                        
Query: 607 TDQAKLKPQPSISRSDHVSTEATKPTRPI 521
           TD A+  P+PS SRS   S  AT+ TR I
Sbjct: 654 TDPARTPPRPSSSRSSRTSAMATRTTRTI 568

>LOC_Os12g44070:12012.t04073:unspliced-genomic nitrate and chloride transporter, putative, expressed|
          Length = 2084

 Score = 34.1 bits (68), Expect = 2.0
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = +1 / +2

                                                          
Query: 157  PSWSWCSVRRFRGLASPGGFSSSVPLILVPCSSEPCCFGLGSWLIC 294
            P  SW      RG ASP   ++S P    PCSS P        L+C
Sbjct: 881  PPTSWSPSSSRRGSASPAPSTASAPPSCSPCSSSPSPL*CARRLLC 1018

>LOC_Os10g10200:12010.t00829:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3475

 Score = 34.1 bits (68), Expect = 2.0
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -3 / -2

                                                  
Query: 330  MDP*IRSQVNSKTD*PRP*TKAARFRRTGYQYQRNRRG 217
            +DP  R    ++   PRP  K +R+RRT  + ++NRRG
Sbjct: 1344 VDPVARILTPTRDRSPRPPRKESRYRRTPIKLRKNRRG 1231

>LOC_Os06g30750:12006.t02778:unspliced-genomic reticulon, putative, expressed|
          Length = 3921

 Score = 34.1 bits (68), Expect = 2.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2 / -3

                                                 
Query: 304  QQQDRLATTLNQSSKVQKNRVPISTEQTRRIHRD*LD 194
            Q Q  L  T+ Q++K  KNR   S EQ   +H  *LD
Sbjct: 2365 QSQKNLELTIGQTNKQTKNRTLFSKEQLGLLHTQ*LD 2255

>LOC_Os04g55120:12004.t04985:unspliced-genomic jp18, putative, expressed|
          Length = 901

 Score = 33.6 bits (67), Expect = 2.8
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = -1 / -3

                                                               
Query: 296 RQISHDPKPKQQGSEEQGTNINGTDEENPPGLARPRNRRTEHHDQDGMLAWN 141
           R+  H  +P  +  +EQ  N N     +PP   R R   +    Q G+ +WN
Sbjct: 698 RKKEHSARPLPKHGDEQALNPNSNTPLHPPPAPRSRAASSSLRAQLGLRSWN 543

>LOC_Os01g61610:12001.t05539:unspliced-genomic gibberellin 20 oxidase 2, putative, expressed|
          Length = 4934

 Score = 33.6 bits (67), Expect = 2.8
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3 / -2

                                              
Query: 552  ET*SEREIEGCGFSLAWSVQFKVFIFLRRKTTGW 653
            ++*+E+EI GC   L++SV    +  LR K T W
Sbjct: 1939 QS*NEKEINGCSRQLSYSVHDNQYTVLR*KLTEW 1838

>LOC_Os05g35440:12005.t03137:unspliced-genomic serine hydroxymethyltransferase, mitochondrial precursor, putative,|
            expressed
          Length = 4919

 Score = 32.7 bits (65), Expect(2) = 3.2
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1 / +2

                             
Query: 475  WRWSSSFGFISVCYGRL 525
            WR+SS FGF+ VC G++
Sbjct: 2816 WRYSSLFGFVLVCMGKM 2866



 Score = 23.5 bits (45), Expect(2) = 3.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1 / +3

                        
Query: 253  SEPCCFGLGSWL 288
            S  CC GL +WL
Sbjct: 2583 SPDCCHGLSTWL 2618

>LOC_Os03g64080:12003.t05622:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 15359

 Score = 32.7 bits (65), Expect = 5.2
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +1 / +2

                                 
Query: 1054 IVSAELLYCCSVFLLWYVEVY 1116
            +VS+ + +CCS + +WYV ++
Sbjct: 8696 LVSSFMFWCCSTYFVWYVNIH 8758

>LOC_Os02g57060:12002.t05278:unspliced-genomic C-terminal protease precursor, putative, expressed|
          Length = 3509

 Score = 32.7 bits (65), Expect = 5.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1 / +2

                                                                  
Query: 529 WSV*LLQWRHDPNERLKVVVSVWLGLFSSRCLYFCGEKQRVGDSSQSKFSCYFAF 693
           W V LL+    P+   ++ ++VW   + S CLY     Q +  SSQ  F+   +F
Sbjct: 125 WVVILLEATRQPSPSCQLALAVWFWGWCSSCLYLQPPIQHLHVSSQLWFNM*LSF 289

>LOC_Os01g47490:12001.t04197:unspliced-genomic negatively light-regulated protein, putative, expressed|
          Length = 4121

 Score = 32.7 bits (65), Expect = 5.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3 / -3

                            
Query: 465 YRCVEVEQFVWFHFCLL 515
           Y C++ EQ +WFHF  L
Sbjct: 717 YHCIDSEQLIWFHFFFL 667

>LOC_Os05g44300:12005.t03919:unspliced-genomic plant-specific domain TIGR01615 family protein, expressed|
          Length = 2117

 Score = 32.2 bits (64), Expect = 7.2
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1 / -3

                                    
Query: 482  HLHASIPTKLVIRAKHNLHFSSQP 411
            H+HA++P  L+ R  H+ H ++QP
Sbjct: 1608 HVHAALPRALLRRGAHDAHHAAQP 1537

>LOC_Os02g58560:12002.t005527:unspliced-genomic CALS1, putative, expressed|
          Length = 6152

 Score = 32.2 bits (64), Expect = 7.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1 / +3

                                              
Query: 871  R*FLSGYILVFHFKIPRKIGGACFVCILDLIFLG 972
            R F+  Y LV+H  I +       +C L LIFLG
Sbjct: 4767 RFFIYQYGLVYHLNITKHTKSVLVICYLHLIFLG 4868

>LOC_Os03g02100:12003.t00102:unspliced-genomic valyl-tRNA synthetase, putative, expressed|
          Length = 7838

 Score = 28.6 bits (56), Expect(2) = 8.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1 / -2

                                               
Query: 223  SVPLILVPCSSEPCCFGLGSWLICLAVDL*SDLGI 327
            S  LI+  CS +   F + SW +C A  L* +  I
Sbjct: 7579 SASLIISSCSKKLVSFLMSSWTLCGAFSL*PEASI 7475



 Score = 26.7 bits (52), Expect(2) = 8.4
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2 / -1

                                 
Query: 869  GGDS*VAIFWCFISRFLGKSE 931
            G  S  A F CF S FLG SE
Sbjct: 1481 GFSSSTAFFLCFFSLFLGPSE 1419

>LOC_Os12g42840:12012.t03957:unspliced-genomic expressed protein|
          Length = 2966

 Score = 27.6 bits (54), Expect(2) = 8.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3 / -3

                                              
Query: 177 GAPRPGRNARLEYKQTKNSGKGARDRNRLRTPYLR 73
           G  R  R     ++  + SG+GA  R R RTP  R
Sbjct: 471 GGTRWRRRGGRTWRAPRRSGRGAPRRRRCRTPSTR 367



 Score = 26.3 bits (51), Expect(2) = 8.9
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = -2 / -3

                                                                    
Query: 1159 VRRIDRLHHSNQHLNTPRHTTREKQSSSKVVLQRQSKSIFSILERTFKQITSKANF 992
            +R   R   SNQ  + P     EKQS+        S S  S+L+ + + +  K  F
Sbjct: 831  IRSSIRRSESNQIRDYPEQKKEEKQSNQT*GYNASSSSTISLLDLSTELVPPKHPF 664

>LOC_Os02g56020:12002.t05176:unspliced-genomic methyltransferase WBSCR22, putative, expressed|
          Length = 3051

 Score = 29.9 bits (59), Expect(2) = 9.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1 / +3

                                       
Query: 175 SVRRFRGLASPGGFSSSVPLILVPCSSE 258
           S  R+  +ASP  FS+SV L+L  CS++
Sbjct: 525 SCLRYPTMASPSCFSTSVMLLLSSCSND 608



 Score = 24.0 bits (46), Expect(2) = 9.1
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = +1 / +2

                                    
Query: 1063 AELLYCCSVFLLWYVEVYSSAGYC 1134
            A  L  CS   L YV  +    YC
Sbjct: 2132 AHALQACSCIALCYVSCFKGTTYC 2203

>LOC_Os05g30190:12005.t02618:unspliced-genomic phytochrome A-associated F-box protein, putative, expressed|
          Length = 1589

 Score = 26.7 bits (52), Expect(2) = 9.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2 / +2

                                        
Query: 181 GRSTTTRTECSPGIQADKEQRKGSARSKP 95
           GRSTTT T   P       +R+   R +P
Sbjct: 512 GRSTTTSTSTPPTTAPPPRRRRSQTRLRP 598



 Score = 26.3 bits (51), Expect(2) = 9.3
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2 / +1

                                
Query: 586 PQPSISRSDHVSTEATKPTRP 524
           P PS S  DH ST  + P  P
Sbjct: 409 PSPSSSSLDHASTATSAPAPP 471

>LOC_Os12g41690:12012.t03845:unspliced-genomic plant integral membrane protein TIGR01569 containing protein,|
            expressed
          Length = 5006

 Score = 31.8 bits (63), Expect = 9.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1 / +2

                                     
Query: 1078 CCSVFLLWYVEVYSSAGYCDVIYQS 1152
            C  +FL+WY+ + SS G C ++ Q+
Sbjct: 3752 CLFIFLIWYLFLVSSVGVCLLLLQN 3826

>LOC_Os12g07730:12012.t00655:unspliced-genomic SWIRM domain containing protein, expressed|
          Length = 5967

 Score = 31.8 bits (63), Expect = 9.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1 / +2

                                       
Query: 1075 YCCSVFLLWYVEVYSSAGYCDVIYQSF 1155
            YC       Y+ VYS AGYC + +++F
Sbjct: 5873 YCRRYLCKGYILVYSLAGYCGLYFETF 5953

>LOC_Os08g32350:12008.t02980:unspliced-genomic expressed protein|
          Length = 3614

 Score = 31.8 bits (63), Expect = 9.9
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1 / +1

                                       
Query: 1054 IVSAELLYCCSVFLLWYVEVYSSAGYC 1134
            +VS+ LLYC +V  + +  +Y ++ YC
Sbjct: 1084 LVSSHLLYCDTVLFITFPSIYRTSQYC 1164

>LOC_Os07g39220:12007.t03583:unspliced-genomic BES1/BZR1 homolog protein 1, putative, expressed|
          Length = 1536

 Score = 31.8 bits (63), Expect = 9.9
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1 / -3

                                                
Query: 209 PGLARPRNRRTEHHDQDGMLAWNTSRQRTAEREREIE 99
           P L RPR RR     +DG  A +  R+   E   E E
Sbjct: 751 PDLGRPRRRRRRERRRDGRAAGDAERREVGEPPEERE 641

>LOC_Os05g38840:12005.t03426:unspliced-genomic hypothetical protein|
          Length = 543

 Score = 31.8 bits (63), Expect = 9.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1 / -1

                                  
Query: 199 ASPGGFSSSVPLILVPCSSEPCC 267
           +SPGG  +   ++L  CS  PCC
Sbjct: 75  SSPGGHGNLASMVLASCSLVPCC 7

>LOC_Os04g01140:12004.t00015:unspliced-genomic cytochrome P450 93A2, putative, expressed|
          Length = 2025

 Score = 31.8 bits (63), Expect = 9.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1 / -3

                                              
Query: 163  WSWCSVRRFRGLASPGGFSSSVPLILVPCSSEPC 264
            W+W   R FR    P   S S+ L+ + C S+ C
Sbjct: 1636 WAWRRRRCFRAQTRPSASSMSINLLSMHCQSKHC 1535

>LOC_Os02g11020:12002.t00950:unspliced-genomic cytochrome P450 72A1, putative, expressed|
          Length = 2859

 Score = 31.8 bits (63), Expect = 9.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1 / -2

                                          
Query: 157  PSWSWCSVRRFRGLASPGGFSSSVPLILVP 246
            PS SW S    R +A+ GG+S SV  +++P
Sbjct: 1925 PSESWTSTLARRMVATAGGYSRSVSFMIMP 1836

>LOC_Os01g16550:12001.t01504:unspliced-genomic expressed protein|
          Length = 2733

 Score = 31.8 bits (63), Expect = 9.9
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1 / +1

                                         
Query: 757  LGLSGYICFRLAAYTCQII*KGLCYITML 843
            LG+ GY+C RL A   + +   LCYI  L
Sbjct: 2251 LGICGYLCLRLCAIEDECVEWILCYIAYL 2337


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 460,162,553
Number of extensions: 7508846
Number of successful extensions: 30276
Number of sequences better than 10.0: 26
Length of query: 391
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 341
Effective length of database: 52,799,986
Effective search space: 18004795226
Effective search space used: 18004795226
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)