>Q3TFK5:GPTC4_MOUSE G patch domain-containing protein 4 - Mus musculus (Mouse)|
          Length = 415
 Score = 35.4 bits (80), Expect = 0.46
 Identities = 24/63 (38%), Positives = 33/63 (52%)
 Frame = -1

Query: 275 KPKQQGSEEQGTNINGTDEENPPGLARPRNRRTEHHDQDGMLAWNTSRQRTAEREREIET 96
           K K+Q +E QGT I G++EE   G + PR   TE  DQ        SR++   R++  E 
Sbjct: 243 KKKRQKAERQGTAI-GSEEEEAAGESGPRELSTEQSDQ-------PSRKKKKRRKQRHEE 294

Query: 95  DYE 87
           D E
Sbjct: 295 DGE 297

>Q6RHR9:MAGI1_MOUSE Membrane-associated guanylate kinase, WW and PDZ domain-containing|
            protein 1 - Mus musculus (Mouse)
          Length = 1471

 Score = 33.5 bits (75), Expect = 1.7
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
 Frame = -1

Query: 320  KSDHKSTARQISHDPKPKQQGSEEQGTNI--NGTDEENPPGLARPRNRRTE--HHDQDGM 153
            KS   +  R  + DPK  ++ S++   +   NGT  +   G  RP++R  +     Q   
Sbjct: 1262 KSSQHAEKRAHAKDPKGNREHSKQPNEHHTWNGTSRKQDSGACRPKDRPPDAWREAQPER 1321

Query: 152  LAWNTSRQRTAERERE 105
             A N S++R+ E+ RE
Sbjct: 1322 TATNGSKRRSPEKRRE 1337

>Q5BKF8:CCNL2_XENTR Cyclin-L2 - Xenopus tropicalis (Western clawed frog) (Silurana|
            tropicalis)
          Length = 497

 Score = 33.5 bits (75), Expect = 1.7
 Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
 Frame = -2

Query: 1096 REKQSSSKVVLQRQSKSIFSILERTFKQITSKANFHVHLRYLPGKL------NLECKQNK 935
            REKQ S+ ++L ++  ++ + + +  +++  +  F VH+++ P K+       LEC++NK
Sbjct: 133  REKQKSTPLILDQEYVNLKNQIIKAERRVLKELGFCVHVKH-PHKIIVMYLQVLECERNK 191

Query: 934  HL 929
            HL
Sbjct: 192  HL 193

>P50729:RECQ_BACSU ATP-dependent DNA helicase recQ - Bacillus subtilis|
          Length = 496

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 26/101 (25%), Positives = 41/101 (40%)
 Frame = +2

Query: 554 DMIRTRD*RLWFQFGLVCSVQGVYIFAAKNNGLETVHSQNSAVILLLIPFLHTWSDLIRI 733
           D  R RD  L +  G   +   +++F      +E +  + S  + L +  +H  S L++ 
Sbjct: 369 DERRLRDVLLQYGVGETQARMMIHLFMQGKTSVELMKKEISYRMELKLEKMHRVSFLLQR 428

Query: 734 SGSWKKVC*VYPDIFAFA*QPIHARSYEKDCAILPCCKLCG 856
            G  ++    Y D            SYE D   LPCC  CG
Sbjct: 429 DGCLRQALLTYFD-----------ESYEPDDGNLPCCSHCG 458

>P09406:RU17_XENLA U1 small nuclear ribonucleoprotein 70 kDa - Xenopus laevis (African|
           clawed frog)
          Length = 471

 Score = 32.0 bits (71), Expect = 5.1
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -1

Query: 293 QISHDPKPK-QQGSEEQGTNINGTDEENPPGLARPRNRRTEHHDQDGMLAWNTSRQRTAE 117
           ++  +P+ K ++   E+  +    +++      R R+RR  H D+D     +  R R  +
Sbjct: 340 ELKQEPEEKSRERDRERDRDREKGEKDRDKDRDRDRDRRRSHRDRDREKDRDRDRDRRRD 399

Query: 116 REREIETDYEH 84
           R+R+ E D +H
Sbjct: 400 RDRDRERDKDH 410

>Q9BTC0:DIDO1_HUMAN Death-inducer obliterator 1 - Homo sapiens (Human)|
          Length = 2240

 Score = 32.0 bits (71), Expect = 5.1
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -1

Query: 197  RPRNRRTEHHDQDGMLAWNTSRQRTAEREREIETD 93
            RPR     H D+D    W+ +R+R+A R+RE E D
Sbjct: 2131 RPREW-DRHRDKDSSRDWDRNRERSANRDREREAD 2164

>Q61687:ATRX_MOUSE Transcriptional regulator ATRX - Mus musculus (Mouse)|
          Length = 2476

 Score = 31.6 bits (70), Expect = 6.6
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
 Frame = -1

Query: 320  KSDHKSTARQISHDPKPKQQGSEEQGTNINGTDEEN-----PPGLARPRNRRTEHHD--- 165
            K    S++   SH  + K++G EE   + +  +E+       PG  R + R+    D   
Sbjct: 1416 KVQEDSSSENKSHSEEDKKEGDEEDEEDEDEDEEDENDDSKSPGKGRKKIRKILKDDKLR 1475

Query: 164  ---QDGMLAWNTSRQRTAEREREIE 99
               Q+ +      R+R AERERE E
Sbjct: 1476 TETQNALKEEEERRKRIAERERERE 1500

>Q9ERB0:SNP29_MOUSE Synaptosomal-associated protein 29 - Mus musculus (Mouse)|
          Length = 260

 Score = 31.2 bits (69), Expect = 8.7
 Identities = 24/69 (34%), Positives = 32/69 (46%)
 Frame = -2

Query: 352 IRSQPEHDGSLNQITSQQQDRLATTLNQSSKVQKNRVPISTEQTRRIHRD*LDLEIDGRS 173
           +   PE +GS   I SQ   RL   +N +SK Q+N+   S    RR+    LD      S
Sbjct: 128 VEPPPEQNGS---IVSQPNSRLKEAIN-TSKDQENKYQASHPNLRRLQDAELDSVPKEPS 183

Query: 172 TTTRTECSP 146
           +T  TE  P
Sbjct: 184 STVNTEVYP 192

>Q7ZVX0:CCNL1_DANRE Cyclin-L1 - Danio rerio (Zebrafish) (Brachydanio rerio)|
          Length = 498

 Score = 31.2 bits (69), Expect = 8.7
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
 Frame = -1

Query: 344 TTRA*WIPKSDHKST-ARQISHDPKPKQQGSEEQGTNINGTDEENPPGLARPRNRRTEHH 168
           T+R+    +  H  T +   SH P P+Q+       +   TD + P   +R  N+R    
Sbjct: 376 TSRSPHRHRRSHSGTYSSHSSHSPSPRQKARRPSPISQLRTDRDRPSETSRHSNKRRR-- 433

Query: 167 DQDGMLAWNTSRQRTAEREREIETDYEHH 81
                   + SR R+  RER  + D+  H
Sbjct: 434 --------SRSRSRSNSRERVRDRDHIKH 454


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 201,592,247
Number of extensions: 4414548
Number of successful extensions: 12097
Number of sequences better than 10.0: 9
Number of HSP's gapped: 12043
Number of HSP's successfully gapped: 9
Length of query: 391
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 276
Effective length of database: 69,142,514
Effective search space: 19083333864
Effective search space used: 19083333864
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)