| Clone Name | FLbaf40n04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK065196:Os11g0629200 | 565 | e-161 | 2 | AK073408:Os12g0500700 | 540 | e-154 | 3 | Os03g0679100:Os03g0679100 | 197 | 1e-50 | 4 | AK107146:Os02g0764700 | 32 | 0.86 | 5 | AK106963:Os06g0187200 | 32 | 0.86 | 6 | Os03g0337500:Os03g0337500 | 31 | 2.5 | 7 | AK071654:Os02g0791500 | 30 | 4.3 | 8 | AK069596:Os02g0791500 | 30 | 4.3 | 9 | AK120933:Os01g0917500 | 29 | 7.3 | 10 | AB103395:Os01g0917500 | 29 | 7.3 |
|---|
>AK065196:Os11g0629200 | Length = 304 Score = 565 bits (1457), Expect = e-161 Identities = 275/304 (90%), Positives = 290/304 (95%) Frame = +1 Query: 184 MNYIIGAFKPPCDIFVTFSDERCRKQVAVKKDNGKTAMVPAFQSLETIAGEVSIAPVPGK 363 MNYIIGAFK PCD+F+TF+DER RKQVA+KKDNGKT MVPAFQSLETIAGEVS+APVPGK Sbjct: 1 MNYIIGAFKAPCDVFITFADERSRKQVAIKKDNGKTLMVPAFQSLETIAGEVSVAPVPGK 60 Query: 364 RIEHMGVKIELLGQIELYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYESY 543 R+EH GVKIELLGQIELY +RG+FYDFTSLVREL+V GEIYERKTYPFEFSTVEMPYESY Sbjct: 61 RVEHQGVKIELLGQIELYHERGHFYDFTSLVRELEVAGEIYERKTYPFEFSTVEMPYESY 120 Query: 544 NGTNVRLRYILKVTIGRNYVGNIVECRDFCVRNYSPLPSINNSIKMEVGIEDCLHIEFEY 723 NGTNVRLRYILKVTIGR Y ++VECRDFCVRNY+PLPSINNSIKMEVGIEDCLHIEFEY Sbjct: 121 NGTNVRLRYILKVTIGRPYATSVVECRDFCVRNYTPLPSINNSIKMEVGIEDCLHIEFEY 180 Query: 724 SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP 903 SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGP TY+ETETLAKFELMDGAP Sbjct: 181 SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPGTYIETETLAKFELMDGAP 240 Query: 904 VRGESIPVRLFLTPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEINMFRLDEI 1083 VRGESIPVRLFLTPYELTPTYRNINNKF+VKYYLNLVLVDEEDRRYFKQQEI M+RL E Sbjct: 241 VRGESIPVRLFLTPYELTPTYRNINNKFNVKYYLNLVLVDEEDRRYFKQQEITMYRLQET 300 Query: 1084 PQPS 1095 PQ S Sbjct: 301 PQSS 304
>AK073408:Os12g0500700 | Length = 306 Score = 540 bits (1392), Expect = e-154 Identities = 264/306 (86%), Positives = 284/306 (92%), Gaps = 2/306 (0%) Frame = +1 Query: 184 MNYIIGAFKPPCDIFVTFSDERCRKQVAVKKDNGKTAMVPAFQSLETIAGEVSIAPVPGK 363 MNYI+GAFKPPCDI + FSD R RKQ+AVK DNG+T MVP FQSLETI+GEVS+ PVPGK Sbjct: 1 MNYIVGAFKPPCDISIAFSDARSRKQIAVKNDNGRTVMVPVFQSLETISGEVSVVPVPGK 60 Query: 364 RIEHMGVKIELLGQIELYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYESY 543 RIEH+GVKIELLGQIELY +RG FYDFTSLVRELD+PGEIYE+KTYPFEFSTVEMPYESY Sbjct: 61 RIEHLGVKIELLGQIELYLERGKFYDFTSLVRELDIPGEIYEKKTYPFEFSTVEMPYESY 120 Query: 544 NGTNVRLRYILKVTIGRNYVG--NIVECRDFCVRNYSPLPSINNSIKMEVGIEDCLHIEF 717 NGTNVRLRYILKVTI RN +G +IVE R+FCVRNYSP P+INNSIKMEVGIEDCLHIEF Sbjct: 121 NGTNVRLRYILKVTISRNIMGMGSIVEFREFCVRNYSPAPTINNSIKMEVGIEDCLHIEF 180 Query: 718 EYSKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDG 897 EYSKSKYHLKDVI+GKIYFLLVRIKIKNMELE+RRRESTG+G + YVETETLAKFELMDG Sbjct: 181 EYSKSKYHLKDVIIGKIYFLLVRIKIKNMELEVRRRESTGAGSSAYVETETLAKFELMDG 240 Query: 898 APVRGESIPVRLFLTPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEINMFRLD 1077 APVRGESIPVRLFLTPYELTP+YRNINNKFSVKYYLNLVLVDEEDRRYFKQQEI M+RL Sbjct: 241 APVRGESIPVRLFLTPYELTPSYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMYRLL 300 Query: 1078 EIPQPS 1095 E PQ S Sbjct: 301 ETPQAS 306
>Os03g0679100:Os03g0679100 | Length = 365 Score = 197 bits (502), Expect = 1e-50 Identities = 97/113 (85%), Positives = 103/113 (91%) Frame = +1 Query: 295 MVPAFQSLETIAGEVSIAPVPGKRIEHMGVKIELLGQIELYFDRGNFYDFTSLVRELDVP 474 MV AFQSLETIAGEVSIAP+PGKR+EH GVKIELLGQIELY +RG+FYDFTSLVRELDV Sbjct: 1 MVLAFQSLETIAGEVSIAPIPGKRVEHQGVKIELLGQIELYHERGHFYDFTSLVRELDVA 60 Query: 475 GEIYERKTYPFEFSTVEMPYESYNGTNVRLRYILKVTIGRNYVGNIVECRDFC 633 GEIYERKTYPFEFSTVEMPY+SYNGTNVRLRYILKV IGR Y +VE RDFC Sbjct: 61 GEIYERKTYPFEFSTVEMPYDSYNGTNVRLRYILKVRIGRPYATIVVEYRDFC 113
>AK107146:Os02g0764700 | Length = 242 Score = 32.3 bits (72), Expect = 0.86 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 7/79 (8%) Frame = -3 Query: 261 LLPAPLIGKGHEDVAGRLECADDVIHGCVGAENKVDVEGDAGGDSRERTPAPEEGINGVV 82 LLP P + VAG CA + GC+G + +V V A G S E G V Sbjct: 41 LLPEPTMATV---VAGAATCARCGVDGCIGVDCEVVVLAAAAGSSCSDEEDEGECTTGAV 97 Query: 81 -------GAGRQLPGRASG 46 G G++ P R SG Sbjct: 98 ASGGVTGGVGKRRPRRRSG 116
>AK106963:Os06g0187200 | Length = 309 Score = 32.3 bits (72), Expect = 0.86 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -3 Query: 240 GKGHEDVAGRLECADDVIHGCVGAENKVDVEG-DAGGDSRERTPAP 106 G+ H D+A DD++ GC+ A +D G GG R+R AP Sbjct: 175 GRDHVDIARDFTYIDDIVRGCLAA---LDTAGRSTGGGGRKRGAAP 217
>Os03g0337500:Os03g0337500 | Length = 337 Score = 30.8 bits (68), Expect = 2.5 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 6/56 (10%) Frame = +1 Query: 271 KKDNGKTAMVPAFQSLETIAGEVSIAPVP------GKRIEHMGVKIELLGQIELYF 420 ++D+ KT ++ A+QSL + G++SI+P+ + I+H E+ G + F Sbjct: 112 QRDSWKTTLLLAYQSLGVVYGDLSISPLYVFKSTFAEDIQHSETNEEIFGVLSFVF 167
>AK071654:Os02g0791500 | Length = 437 Score = 30.0 bits (66), Expect = 4.3 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -3 Query: 240 GKGHEDVAGRLECADDVIHGCVGAENKVDVEGDAGGDSRERTPAP 106 GK D+A DD++ GC+G+ + GG ++R PAP Sbjct: 307 GKNRVDLARDFTYIDDIVKGCLGSLDTAGKSTGTGG--KKRGPAP 349
>AK069596:Os02g0791500 | Length = 230 Score = 30.0 bits (66), Expect = 4.3 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -3 Query: 240 GKGHEDVAGRLECADDVIHGCVGAENKVDVEGDAGGDSRERTPAP 106 GK D+A DD++ GC+G+ + GG ++R PAP Sbjct: 100 GKNRVDLARDFTYIDDIVKGCLGSLDTAGKSTGTGG--KKRGPAP 142
>AK120933:Os01g0917500 | Length = 835 Score = 29.3 bits (64), Expect = 7.3 Identities = 20/75 (26%), Positives = 39/75 (52%) Frame = -3 Query: 771 IDLSYNDILEMVLAFAVLKLNMQTIFNSNFHLDAVIDRRKRRIVPYTEIPTFHNIANIVS 592 I+LS+N+ + +L ++ + +Q + SN HLD I + +I+P + +S Sbjct: 244 INLSFNEFVGPMLPWSGPLVQLQGLILSNNHLDGSIPAKIGQILPKIAVLD-------LS 296 Query: 591 TNRHFQDVPQSDICS 547 +N +PQS +C+ Sbjct: 297 SNALTGTLPQSLLCN 311
>AB103395:Os01g0917500 | Length = 1294 Score = 29.3 bits (64), Expect = 7.3 Identities = 20/75 (26%), Positives = 39/75 (52%) Frame = -3 Query: 771 IDLSYNDILEMVLAFAVLKLNMQTIFNSNFHLDAVIDRRKRRIVPYTEIPTFHNIANIVS 592 I+LS+N+ + +L ++ + +Q + SN HLD I + +I+P + +S Sbjct: 703 INLSFNEFVGPMLPWSGPLVQLQGLILSNNHLDGSIPAKIGQILPKIAVLD-------LS 755 Query: 591 TNRHFQDVPQSDICS 547 +N +PQS +C+ Sbjct: 756 SNALTGTLPQSLLCN 770 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 39,657,610 Number of extensions: 909446 Number of successful extensions: 2733 Number of sequences better than 10.0: 10 Number of HSP's gapped: 2726 Number of HSP's successfully gapped: 10 Length of query: 481 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 377 Effective length of database: 11,235,591 Effective search space: 4235817807 Effective search space used: 4235817807 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)