ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf40n04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK065196:Os11g0629200 565 e-161
2AK073408:Os12g0500700 540 e-154
3Os03g0679100:Os03g0679100 197 1e-50
4AK107146:Os02g0764700 32 0.86
5AK106963:Os06g0187200 32 0.86
6Os03g0337500:Os03g0337500 31 2.5
7AK071654:Os02g0791500 30 4.3
8AK069596:Os02g0791500 30 4.3
9AK120933:Os01g0917500 29 7.3
10AB103395:Os01g0917500 29 7.3

>AK065196:Os11g0629200 |
          Length = 304
 Score =  565 bits (1457), Expect = e-161
 Identities = 275/304 (90%), Positives = 290/304 (95%)
 Frame = +1

Query: 184  MNYIIGAFKPPCDIFVTFSDERCRKQVAVKKDNGKTAMVPAFQSLETIAGEVSIAPVPGK 363
            MNYIIGAFK PCD+F+TF+DER RKQVA+KKDNGKT MVPAFQSLETIAGEVS+APVPGK
Sbjct: 1    MNYIIGAFKAPCDVFITFADERSRKQVAIKKDNGKTLMVPAFQSLETIAGEVSVAPVPGK 60

Query: 364  RIEHMGVKIELLGQIELYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYESY 543
            R+EH GVKIELLGQIELY +RG+FYDFTSLVREL+V GEIYERKTYPFEFSTVEMPYESY
Sbjct: 61   RVEHQGVKIELLGQIELYHERGHFYDFTSLVRELEVAGEIYERKTYPFEFSTVEMPYESY 120

Query: 544  NGTNVRLRYILKVTIGRNYVGNIVECRDFCVRNYSPLPSINNSIKMEVGIEDCLHIEFEY 723
            NGTNVRLRYILKVTIGR Y  ++VECRDFCVRNY+PLPSINNSIKMEVGIEDCLHIEFEY
Sbjct: 121  NGTNVRLRYILKVTIGRPYATSVVECRDFCVRNYTPLPSINNSIKMEVGIEDCLHIEFEY 180

Query: 724  SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP 903
            SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGP TY+ETETLAKFELMDGAP
Sbjct: 181  SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPGTYIETETLAKFELMDGAP 240

Query: 904  VRGESIPVRLFLTPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEINMFRLDEI 1083
            VRGESIPVRLFLTPYELTPTYRNINNKF+VKYYLNLVLVDEEDRRYFKQQEI M+RL E 
Sbjct: 241  VRGESIPVRLFLTPYELTPTYRNINNKFNVKYYLNLVLVDEEDRRYFKQQEITMYRLQET 300

Query: 1084 PQPS 1095
            PQ S
Sbjct: 301  PQSS 304



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>AK073408:Os12g0500700 |
          Length = 306

 Score =  540 bits (1392), Expect = e-154
 Identities = 264/306 (86%), Positives = 284/306 (92%), Gaps = 2/306 (0%)
 Frame = +1

Query: 184  MNYIIGAFKPPCDIFVTFSDERCRKQVAVKKDNGKTAMVPAFQSLETIAGEVSIAPVPGK 363
            MNYI+GAFKPPCDI + FSD R RKQ+AVK DNG+T MVP FQSLETI+GEVS+ PVPGK
Sbjct: 1    MNYIVGAFKPPCDISIAFSDARSRKQIAVKNDNGRTVMVPVFQSLETISGEVSVVPVPGK 60

Query: 364  RIEHMGVKIELLGQIELYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYESY 543
            RIEH+GVKIELLGQIELY +RG FYDFTSLVRELD+PGEIYE+KTYPFEFSTVEMPYESY
Sbjct: 61   RIEHLGVKIELLGQIELYLERGKFYDFTSLVRELDIPGEIYEKKTYPFEFSTVEMPYESY 120

Query: 544  NGTNVRLRYILKVTIGRNYVG--NIVECRDFCVRNYSPLPSINNSIKMEVGIEDCLHIEF 717
            NGTNVRLRYILKVTI RN +G  +IVE R+FCVRNYSP P+INNSIKMEVGIEDCLHIEF
Sbjct: 121  NGTNVRLRYILKVTISRNIMGMGSIVEFREFCVRNYSPAPTINNSIKMEVGIEDCLHIEF 180

Query: 718  EYSKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDG 897
            EYSKSKYHLKDVI+GKIYFLLVRIKIKNMELE+RRRESTG+G + YVETETLAKFELMDG
Sbjct: 181  EYSKSKYHLKDVIIGKIYFLLVRIKIKNMELEVRRRESTGAGSSAYVETETLAKFELMDG 240

Query: 898  APVRGESIPVRLFLTPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEINMFRLD 1077
            APVRGESIPVRLFLTPYELTP+YRNINNKFSVKYYLNLVLVDEEDRRYFKQQEI M+RL 
Sbjct: 241  APVRGESIPVRLFLTPYELTPSYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMYRLL 300

Query: 1078 EIPQPS 1095
            E PQ S
Sbjct: 301  ETPQAS 306



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>Os03g0679100:Os03g0679100 |
          Length = 365

 Score =  197 bits (502), Expect = 1e-50
 Identities = 97/113 (85%), Positives = 103/113 (91%)
 Frame = +1

Query: 295 MVPAFQSLETIAGEVSIAPVPGKRIEHMGVKIELLGQIELYFDRGNFYDFTSLVRELDVP 474
           MV AFQSLETIAGEVSIAP+PGKR+EH GVKIELLGQIELY +RG+FYDFTSLVRELDV 
Sbjct: 1   MVLAFQSLETIAGEVSIAPIPGKRVEHQGVKIELLGQIELYHERGHFYDFTSLVRELDVA 60

Query: 475 GEIYERKTYPFEFSTVEMPYESYNGTNVRLRYILKVTIGRNYVGNIVECRDFC 633
           GEIYERKTYPFEFSTVEMPY+SYNGTNVRLRYILKV IGR Y   +VE RDFC
Sbjct: 61  GEIYERKTYPFEFSTVEMPYDSYNGTNVRLRYILKVRIGRPYATIVVEYRDFC 113



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>AK107146:Os02g0764700 |
          Length = 242

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
 Frame = -3

Query: 261 LLPAPLIGKGHEDVAGRLECADDVIHGCVGAENKVDVEGDAGGDSRERTPAPEEGINGVV 82
           LLP P +      VAG   CA   + GC+G + +V V   A G S        E   G V
Sbjct: 41  LLPEPTMATV---VAGAATCARCGVDGCIGVDCEVVVLAAAAGSSCSDEEDEGECTTGAV 97

Query: 81  -------GAGRQLPGRASG 46
                  G G++ P R SG
Sbjct: 98  ASGGVTGGVGKRRPRRRSG 116



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>AK106963:Os06g0187200 |
          Length = 309

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 240 GKGHEDVAGRLECADDVIHGCVGAENKVDVEG-DAGGDSRERTPAP 106
           G+ H D+A      DD++ GC+ A   +D  G   GG  R+R  AP
Sbjct: 175 GRDHVDIARDFTYIDDIVRGCLAA---LDTAGRSTGGGGRKRGAAP 217



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>Os03g0337500:Os03g0337500 |
          Length = 337

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
 Frame = +1

Query: 271 KKDNGKTAMVPAFQSLETIAGEVSIAPVP------GKRIEHMGVKIELLGQIELYF 420
           ++D+ KT ++ A+QSL  + G++SI+P+        + I+H     E+ G +   F
Sbjct: 112 QRDSWKTTLLLAYQSLGVVYGDLSISPLYVFKSTFAEDIQHSETNEEIFGVLSFVF 167



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>AK071654:Os02g0791500 |
          Length = 437

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 240 GKGHEDVAGRLECADDVIHGCVGAENKVDVEGDAGGDSRERTPAP 106
           GK   D+A      DD++ GC+G+ +        GG  ++R PAP
Sbjct: 307 GKNRVDLARDFTYIDDIVKGCLGSLDTAGKSTGTGG--KKRGPAP 349



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>AK069596:Os02g0791500 |
          Length = 230

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 240 GKGHEDVAGRLECADDVIHGCVGAENKVDVEGDAGGDSRERTPAP 106
           GK   D+A      DD++ GC+G+ +        GG  ++R PAP
Sbjct: 100 GKNRVDLARDFTYIDDIVKGCLGSLDTAGKSTGTGG--KKRGPAP 142



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>AK120933:Os01g0917500 |
          Length = 835

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 20/75 (26%), Positives = 39/75 (52%)
 Frame = -3

Query: 771 IDLSYNDILEMVLAFAVLKLNMQTIFNSNFHLDAVIDRRKRRIVPYTEIPTFHNIANIVS 592
           I+LS+N+ +  +L ++   + +Q +  SN HLD  I  +  +I+P   +         +S
Sbjct: 244 INLSFNEFVGPMLPWSGPLVQLQGLILSNNHLDGSIPAKIGQILPKIAVLD-------LS 296

Query: 591 TNRHFQDVPQSDICS 547
           +N     +PQS +C+
Sbjct: 297 SNALTGTLPQSLLCN 311



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>AB103395:Os01g0917500 |
          Length = 1294

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 20/75 (26%), Positives = 39/75 (52%)
 Frame = -3

Query: 771 IDLSYNDILEMVLAFAVLKLNMQTIFNSNFHLDAVIDRRKRRIVPYTEIPTFHNIANIVS 592
           I+LS+N+ +  +L ++   + +Q +  SN HLD  I  +  +I+P   +         +S
Sbjct: 703 INLSFNEFVGPMLPWSGPLVQLQGLILSNNHLDGSIPAKIGQILPKIAVLD-------LS 755

Query: 591 TNRHFQDVPQSDICS 547
           +N     +PQS +C+
Sbjct: 756 SNALTGTLPQSLLCN 770


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 39,657,610
Number of extensions: 909446
Number of successful extensions: 2733
Number of sequences better than 10.0: 10
Number of HSP's gapped: 2726
Number of HSP's successfully gapped: 10
Length of query: 481
Length of database: 15,399,855
Length adjustment: 104
Effective length of query: 377
Effective length of database: 11,235,591
Effective search space: 4235817807
Effective search space used: 4235817807
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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