ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf40m24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072634:Os02g0689700 | 248 | 3e-66 | 2 | AK063776:Os02g0689700 | 112 | 4e-25 | 3 | AK070091:Os10g0559900 | 104 | 6e-23 | 4 | AK107329:Os10g0484400 | 77 | 2e-14 | 5 | AK107124:Os10g0484400 | 77 | 2e-14 | 6 | AK099373:Os01g0256600 | 67 | 1e-11 | 7 | AK063884:Os01g0256600 | 67 | 1e-11 | 8 | AK071362:Os03g0694800 | 56 | 3e-08 | 9 | Os03g0185000:Os03g0185000 | 32 | 0.63 | 10 | Os03g0196600:Os03g0196600 | 30 | 1.4 | 11 | AK102343:Os02g0743400 | 25 | 3.1 | 12 | AK099634:Os02g0743400 | 25 | 3.1 | 13 | AF056027:Os02g0743400 | 25 | 3.1 | 14 | AK066962:Os12g0538900 | 28 | 9.1 |
|---|
>AK072634:Os02g0689700 | Length = 181 Score = 248 bits (634), Expect = 3e-66 Identities = 130/183 (71%), Positives = 140/183 (76%) Frame = +3 Query: 81 AAIYPTTAALPTRHXXXXXXXXXXXXXXASITQHRIXXXXXXXXXXXXXXNRRSFVVRAA 260 AA YPT A LP R ++ H NR S VVRAA Sbjct: 4 AAAYPTAATLPPRRAPPPSLRPSPPLSWSASIAH------LALSPPPVPSNRASLVVRAA 57 Query: 261 WTRRSRGELDKSPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNA 440 WTRRSR E ++ PNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKV+HRGTSKVI+VA+TNA Sbjct: 58 WTRRSRKEAEERPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVVHRGTSKVISVASTNA 117 Query: 441 KDLRTTLPSLIDDNACRTIGRLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEYG 620 KDLRTTLPSL+DDNACRTIGRLIAERSMDADVFAM+YEPKKNERIEGKLGIVIDTIKE+G Sbjct: 118 KDLRTTLPSLVDDNACRTIGRLIAERSMDADVFAMSYEPKKNERIEGKLGIVIDTIKEHG 177 Query: 621 IIF 629 IIF Sbjct: 178 IIF 180
>AK063776:Os02g0689700 | Length = 58 Score = 112 bits (279), Expect = 4e-25 Identities = 54/57 (94%), Positives = 57/57 (100%) Frame = +3 Query: 459 LPSLIDDNACRTIGRLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEYGIIF 629 LPSL+DDNACRTIGRLIAERSMDADVFAM+YEPKKNERIEGKLGIVIDTIKE+GIIF Sbjct: 1 LPSLVDDNACRTIGRLIAERSMDADVFAMSYEPKKNERIEGKLGIVIDTIKEHGIIF 57
>AK070091:Os10g0559900 | Length = 187 Score = 104 bits (260), Expect = 6e-23 Identities = 51/112 (45%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Frame = +3 Query: 291 KSPNRK-SWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNAKDLRTTLPS 467 K+P++ S+KQRT YM PF L+VF SKRFV A + HR T + +AVA TN+KD++ L S Sbjct: 69 KNPHKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIKAALKS 128 Query: 468 LIDDNACRTIGRLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEYGI 623 D AC +GR +AER+ +ADV+ Y P++ ++ EGK+ V+ ++ + GI Sbjct: 129 RSDIPACLAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGI 180
>AK107329:Os10g0484400 | Length = 323 Score = 76.6 bits (187), Expect = 2e-14 Identities = 40/126 (31%), Positives = 74/126 (58%), Gaps = 1/126 (0%) Frame = +3 Query: 249 VRAAWTRRSRGELDKSPNR-KSWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAV 425 ++ +T R ++ +R ++ Q TD Y PF L++ +K V A +HR +S+V+ V Sbjct: 174 LKTKYTVREEDVVEAKRDRVPTFNQMTDPYHHPFCLDIHVTKGSVRACFVHRVSSRVVTV 233 Query: 426 ATTNAKDLRTTLPSLIDDNACRTIGRLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDT 605 A + +KD++ + S AC +G L+A+R+++ D+ Y P+K +RIEGK+ +V+ Sbjct: 234 AHSISKDMKFDVGSRKGMKACAAVGALLAKRAIEDDIHNAIYTPRKGDRIEGKIEVVLRA 293 Query: 606 IKEYGI 623 I + G+ Sbjct: 294 IIDNGV 299
>AK107124:Os10g0484400 | Length = 323 Score = 76.6 bits (187), Expect = 2e-14 Identities = 40/126 (31%), Positives = 74/126 (58%), Gaps = 1/126 (0%) Frame = +3 Query: 249 VRAAWTRRSRGELDKSPNR-KSWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAV 425 ++ +T R ++ +R ++ Q TD Y PF L++ +K V A +HR +S+V+ V Sbjct: 174 LKTKYTVREEDVVEAKRDRVPTFNQMTDPYHHPFCLDIHVTKGSVRACFVHRVSSRVVTV 233 Query: 426 ATTNAKDLRTTLPSLIDDNACRTIGRLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDT 605 A + +KD++ + S AC +G L+A+R+++ D+ Y P+K +RIEGK+ +V+ Sbjct: 234 AHSISKDMKFDVGSRKGMKACAAVGALLAKRAIEDDIHNAIYTPRKGDRIEGKIEVVLRA 293 Query: 606 IKEYGI 623 I + G+ Sbjct: 294 IIDNGV 299
>AK099373:Os01g0256600 | Length = 114 Score = 67.0 bits (162), Expect = 1e-11 Identities = 33/101 (32%), Positives = 59/101 (58%) Frame = +3 Query: 321 RTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNAKDLRTTLPSLIDDNACRTIG 500 R +++P+LL + FS ++V A+V+H T+ V A++ K LR + S D A IG Sbjct: 11 RITRFLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIG 70 Query: 501 RLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEYGI 623 +L+ ER + + A+ K+ ++ GK+ VID+++E G+ Sbjct: 71 KLLGERLLQKGIPAVCIHMKREQKYHGKVRAVIDSVREAGV 111
>AK063884:Os01g0256600 | Length = 114 Score = 67.0 bits (162), Expect = 1e-11 Identities = 33/101 (32%), Positives = 59/101 (58%) Frame = +3 Query: 321 RTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNAKDLRTTLPSLIDDNACRTIG 500 R +++P+LL + FS ++V A+V+H T+ V A++ K LR + S D A IG Sbjct: 11 RITRFLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIG 70 Query: 501 RLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEYGI 623 +L+ ER + + A+ K+ ++ GK+ VID+++E G+ Sbjct: 71 KLLGERLLQKGIPAVCIHMKREQKYHGKVRAVIDSVREAGV 111
>AK071362:Os03g0694800 | Length = 114 Score = 55.8 bits (133), Expect = 3e-08 Identities = 27/97 (27%), Positives = 57/97 (58%) Frame = +3 Query: 333 YMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNAKDLRTTLPSLIDDNACRTIGRLIA 512 +++P++L + F+ FV A+V+H ++ V A++ K LR ++ S D A IG+L+ Sbjct: 15 FLKPYVLKMHFTNNFVSAQVIHTPSATVACSASSQEKLLRPSMESTRDVAAAAKIGKLLG 74 Query: 513 ERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEYGI 623 ER + + A++ +++ GK+ V+D+++ G+ Sbjct: 75 ERLLFRGIPAVSVSMSRDQTYHGKVRAVMDSLRAAGV 111
>Os03g0185000:Os03g0185000 | Length = 293 Score = 31.6 bits (70), Expect = 0.63 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Frame = -2 Query: 688 LKKYYNIATVSAPTLELAYAKMMPYSLMVSMTIP--SFPSILSFFLGSYAMAKTSASMDL 515 L+K+Y+ +S P+LE A A ++ L + +P +L+ L ++ A +A DL Sbjct: 66 LRKFYHDLVLSRPSLESALASLLAAKLCIPGALPQDQLRDLLAGALAAHPEAGRAARADL 125 Query: 514 SAMR 503 +A R Sbjct: 126 AAAR 129
>Os03g0196600:Os03g0196600 | Length = 525 Score = 30.4 bits (67), Expect = 1.4 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = -2 Query: 688 LKKYYNIATVSAPTLELAYAKMMPYSLMVSMTIP--SFPSILSFFLGSYAMAKTSASMDL 515 L+K+Y+ +S P+LE A A ++ L + +P +L+ L ++ A +A DL Sbjct: 72 LRKFYHDLVLSRPSLESALASLLAAKLCIPGALPQDQLRDLLAGALAAHPEAGRAARADL 131 Query: 514 SAMR 503 A R Sbjct: 132 VAAR 135
>AK102343:Os02g0743400 | Length = 595 Score = 25.0 bits (53), Expect(2) = 3.1 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +3 Query: 42 PLLPFPASPHAPMAAIYP 95 P P PAS APMA YP Sbjct: 297 PKYPLPASNAAPMAGHYP 314 Score = 22.7 bits (47), Expect(2) = 3.1 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%) Frame = +2 Query: 170 HYPAPHPLV-TAPRSLAAA 223 HYPAP+P V +AP+ A Sbjct: 312 HYPAPNPAVSSAPKGAKKA 330
>AK099634:Os02g0743400 | Length = 595 Score = 25.0 bits (53), Expect(2) = 3.1 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +3 Query: 42 PLLPFPASPHAPMAAIYP 95 P P PAS APMA YP Sbjct: 297 PKYPLPASNAAPMAGHYP 314 Score = 22.7 bits (47), Expect(2) = 3.1 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%) Frame = +2 Query: 170 HYPAPHPLV-TAPRSLAAA 223 HYPAP+P V +AP+ A Sbjct: 312 HYPAPNPAVSSAPKGAKKA 330
>AF056027:Os02g0743400 | Length = 595 Score = 25.0 bits (53), Expect(2) = 3.1 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +3 Query: 42 PLLPFPASPHAPMAAIYP 95 P P PAS APMA YP Sbjct: 297 PKYPLPASNAAPMAGHYP 314 Score = 22.7 bits (47), Expect(2) = 3.1 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%) Frame = +2 Query: 170 HYPAPHPLV-TAPRSLAAA 223 HYPAP+P V +AP+ A Sbjct: 312 HYPAPNPAVSSAPKGAKKA 330
>AK066962:Os12g0538900 | Length = 929 Score = 27.7 bits (60), Expect = 9.1 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = +2 Query: 200 APRSLAAARVQSAVIRGPSGVDAAVARRVGQEPEPQ 307 A R +A + + V+R P +D+ +++VG++P Q Sbjct: 352 ALRCMALRCIGNLVLRNPQNLDSLASKQVGEDPHVQ 387 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,535,632 Number of extensions: 240715 Number of successful extensions: 962 Number of sequences better than 10.0: 14 Number of HSP's gapped: 961 Number of HSP's successfully gapped: 17 Length of query: 256 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 158 Effective length of database: 11,475,837 Effective search space: 1813182246 Effective search space used: 1813182246 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
