| Clone Name | FLbaf40m24 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os02g46440:12002.t04231:unspliced-genomic structural constituent of ribosome, putative, expressed| Length = 1919 Score = 294 bits (637), Expect(2) = 2e-79 Identities = 124/138 (89%), Positives = 132/138 (95%) Frame = +3 / +3 Query: 231 NRRSFVVRAAWTRRSRGELDKSPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTS 410 NR S VVRAAWTRRSR E ++ PNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKV+HRGTS Sbjct: 186 NRASLVVRAAWTRRSRKEAEERPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVVHRGTS 365 Query: 411 KVIAVATTNAKDLRTTLPSLIDDNACRTIGRLIAERSMDADVFAMAYEPKKNERIEGKLG 590 KVI+VA+TNAKDLRTTLPSL+DDNACRTIGRLIAERSMDADVFAM+YEPKKNERIEGKLG Sbjct: 366 KVISVASTNAKDLRTTLPSLVDDNACRTIGRLIAERSMDADVFAMSYEPKKNERIEGKLG 545 Query: 591 IVIDTIKEYGIIFA*ASS 644 IVIDTIKE+GIIF *ASS Sbjct: 546 IVIDTIKEHGIIFV*ASS 599 Score = 22.1 bits (42), Expect(2) = 2e-79 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +2 / +2 Query: 203 PRSLAAARVQSAVIRG 250 PR+LAAAR Q + G Sbjct: 155 PRALAAARAQQPRVPG 202 Score = 112 bits (240), Expect(2) = 2e-51 Identities = 47/53 (88%), Positives = 47/53 (88%) Frame = -2 / -2 Query: 403 PRCMTLAWTKRLEKKTLSRNGRMYMSVRCFHDLRFGLLSNSPRDRRVHAARTT 245 P C TLAWTKRLEKKTLSRNGRMYMSVRCFHDLR GL S S RDRRVHAARTT Sbjct: 358 PLCTTLAWTKRLEKKTLSRNGRMYMSVRCFHDLRLGLSSASFRDRRVHAARTT 200 Score = 110 bits (234), Expect(2) = 2e-51 Identities = 51/61 (83%), Positives = 54/61 (88%) Frame = -2 / -2 Query: 643 ELAYAKMMPYSLMVSMTIPSFPSILSFFLGSYAMAKTSASMDLSAMRRPMVLQALSSMRD 464 ELA +MP SLMVSMT+PSFPSILSFFLGS MAKTSASMDLSAMRRPMVLQALSS R+ Sbjct: 598 ELA*TNIMPCSLMVSMTMPSFPSILSFFLGS*DMAKTSASMDLSAMRRPMVLQALSSTRE 419 Query: 463 G 461 G Sbjct: 418 G 416 Score = 63.8 bits (133), Expect(4) = 2e-25 Identities = 26/30 (86%), Positives = 26/30 (86%) Frame = -1 / -1 Query: 545 HGEDVGVHGPLGYETADGPAGVVVYEGRQR 456 HGEDVGVHGPLG E ADGPAGVVV EG QR Sbjct: 500 HGEDVGVHGPLGDEAADGPAGVVVDEGGQR 411 Score = 50.6 bits (104), Expect(4) = 2e-25 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -1 / -1 Query: 398 VHDLGVDEALGEEDVEQERAH 336 VHDLGVDEALGEEDVEQER H Sbjct: 353 VHDLGVDEALGEEDVEQERPH 291 Score = 31.8 bits (63), Expect(4) = 2e-25 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -3 / -3 Query: 642 NLPMQR*CHTP*WCR*Q 592 NLP Q *C P*WCR*+ Sbjct: 597 NLPKQI*CRAP*WCR*R 547 Score = 24.4 bits (47), Expect(4) = 2e-25 Identities = 11/29 (37%), Positives = 13/29 (44%) Frame = -3 / -3 Query: 288 PTRRATAASTPLGPRMTADWTRAAARERG 202 P A++ P W RAAAR RG Sbjct: 240 PPSATAASTPRAPPGTRGCWARAAARARG 154 Score = 99.6 bits (211), Expect(2) = 2e-22 Identities = 41/74 (55%), Positives = 46/74 (62%) Frame = +2 / +2 Query: 446 PQDHAAVPHRRQRLQDHRPSHSXXXXXXXXXXXXXXAQEEREDRGEARDCHRHH*GVWHH 625 PQDHAA+P RRQRLQDHRP H AQEEREDRGEA HRHH*G H+ Sbjct: 401 PQDHAALPRRRQRLQDHRPPHRREVHGRRRLRHVLRAQEEREDRGEAWHRHRHH*GARHY 580 Query: 626 LCIGKFQCRSRNSC 667 +C+GKF + C Sbjct: 581 ICLGKFSLQR*LKC 622 Score = 29.9 bits (59), Expect(2) = 2e-22 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = +2 / +2 Query: 215 AAARVQSAVIRGPSGVDAAVARRVGQEPEPQ 307 AA Q V G GVDAAVA G E +PQ Sbjct: 170 AARAQQPRVPGGARGVDAAVAEGGGGEAQPQ 262 Score = 29.9 bits (59), Expect(3) = 0.081 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -3 / -3 Query: 501 GRWSCRRCR 475 GRWSCRRCR Sbjct: 456 GRWSCRRCR 430 Score = 24.0 bits (46), Expect(3) = 0.081 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -1 / -1 Query: 272 PPRPRRSDHE 243 PPRPRR+ H+ Sbjct: 227 PPRPRRAHHQ 198 Score = 23.5 bits (45), Expect(3) = 0.081 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = -1 / -1 Query: 641 TCLCKDDAILLNG 603 TCL K +A+LLNG Sbjct: 596 TCLNKYNAVLLNG 558
>LOC_Os10g41050:12010.t03342:unspliced-genomic expressed protein| Length = 1918 Score = 120 bits (257), Expect = 1e-26 Identities = 49/105 (46%), Positives = 71/105 (67%) Frame = +3 / +2 Query: 309 SWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNAKDLRTTLPSLIDDNAC 488 S+KQRT YM PF L+VF SKRFV A + HR T + +AVA TN+KD++ L S D AC Sbjct: 1451 SFKQRTIAYMEPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIKAALKSRSDIPAC 1630 Query: 489 RTIGRLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEYGI 623 +GR +AER+ +ADV+ Y P++ ++ EGK+ V+ ++ + GI Sbjct: 1631 LAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGI 1765 Score = 35.0 bits (70), Expect(2) = 2e-04 Identities = 21/48 (43%), Positives = 26/48 (54%) Frame = -2 / -2 Query: 625 MMPYSLMVSMTIPSFPSILSFFLGSYAMAKTSASMDLSAMRRPMVLQA 482 ++P S+ T FPS LS LG TSAS+ LSA +RP QA Sbjct: 1767 LIPLSIRD*TTALIFPSNLSRSLGV*VQV*TSASLALSARKRPTARQA 1624 Score = 29.5 bits (58), Expect(2) = 2e-04 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -2 / -2 Query: 385 AWTKRLEKKTLSRNGRMYMSVRCFHDL 305 A TKRLE KT S G M VRC ++ Sbjct: 1527 AETKRLEMKTSSVKGSM*AMVRCLKEM 1447
>LOC_Os06g30870:12006.t02790:unspliced-genomic conserved hypothetical protein| Length = 783 Score = 95.9 bits (203), Expect = 3e-19 Identities = 40/51 (78%), Positives = 44/51 (86%) Frame = +3 / +1 Query: 267 RRSRGELDKSPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVI 419 RRSR E ++ PNRKS KQ DMYMRPFLLNVFFSKRFVHAKV+HRGTS+ I Sbjct: 121 RRSRKEAEERPNRKSCKQCMDMYMRPFLLNVFFSKRFVHAKVVHRGTSECI 273 Score = 91.8 bits (194), Expect = 5e-18 Identities = 37/48 (77%), Positives = 38/48 (79%) Frame = -2 / -2 Query: 403 PRCMTLAWTKRLEKKTLSRNGRMYMSVRCFHDLRFGLLSNSPRDRRVH 260 P C TLAWT RLEKKTLSRNGRMYMS+ C HDLR GL S S RDRR H Sbjct: 257 PLCTTLAWTNRLEKKTLSRNGRMYMSMHCLHDLRLGLSSASFRDRRAH 114 Score = 45.1 bits (92), Expect = 6e-04 Identities = 17/21 (80%), Positives = 20/21 (95%) Frame = -1 / -1 Query: 398 VHDLGVDEALGEEDVEQERAH 336 VH+LGVDE+LGEEDVEQ+R H Sbjct: 252 VHNLGVDESLGEEDVEQKRPH 190
>LOC_Os10g34320:12010.t02730:unspliced-genomic expressed protein| Length = 3308 Score = 88.1 bits (186), Expect = 6e-17 Identities = 37/105 (35%), Positives = 65/105 (61%) Frame = +3 / +1 Query: 309 SWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNAKDLRTTLPSLIDDNAC 488 ++ Q TD Y PF L++ +K V A +HR +S+V+ VA + +KD++ + S AC Sbjct: 973 TFNQMTDPYHHPFCLDIHVTKGSVRACFVHRVSSRVVTVAHSISKDMKFDVGSRKGMKAC 1152 Query: 489 RTIGRLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEYGI 623 +G L+A+R+++ D+ Y P+K +RIEGK+ +V+ I + G+ Sbjct: 1153 AAVGALLAKRAIEDDIHNAIYTPRKGDRIEGKIEVVLRAIIDNGV 1287
>LOC_Os01g15290:12001.t01380:unspliced-genomic 50S ribosomal protein L18, putative, expressed| Length = 1865 Score = 77.1 bits (162), Expect = 1e-13 Identities = 33/101 (32%), Positives = 59/101 (58%) Frame = +3 / +2 Query: 321 RTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNAKDLRTTLPSLIDDNACRTIG 500 R +++P+LL + FS ++V A+V+H T+ V A++ K LR + S D A IG Sbjct: 1334 RITRFLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIG 1513 Query: 501 RLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEYGI 623 +L+ ER + + A+ K+ ++ GK+ VID+++E G+ Sbjct: 1514 KLLGERLLQKGIPAVCIHMKREQKYHGKVRAVIDSVREAGV 1636
>LOC_Os01g14760:12001.t01331:unspliced-genomic expressed protein| Length = 873 Score = 32.2 bits (64), Expect(2) = 0.004 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +2 / +2 Query: 176 PAPHPLVTAPRSLAAARVQSAVIRGPSG 259 P+P P A RS AAA + RGPSG Sbjct: 425 PSPTPCCAASRSTAAAAGTACAARGPSG 508 Score = 30.4 bits (60), Expect(2) = 0.004 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = +3 / +3 Query: 3 GLVLDKAASGYLNPLLPFPASPHAPMAAIYPTTAALPTR 119 GL+L L PLLP P P +A + P P R Sbjct: 111 GLLLHPVRRRLLLPLLPLPPPPRRRLALVRPAAPRRPPR 227
>LOC_Os01g16354:12001.t006858:unspliced-genomic rab proteins geranylgeranyltransferase component A, putative,| expressed Length = 5157 Score = 36.3 bits (73), Expect = 0.25 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +2 / +2 Query: 176 PAPHPLVTAPRSLAAARVQSAVIRGPSGVDAAVARRVGQEPEPQ 307 P P P++ AR A+ R P G AA+ RR G+ P PQ Sbjct: 425 PPPQPVLGGGDLGGGARAVQALHRRPGGPQAALLRRRGRRPPPQ 556
>LOC_Os03g43390:12003.t03734:unspliced-genomic Leucine Rich Repeat family protein, expressed| Length = 7582 Score = 35.9 bits (72), Expect = 0.34 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -3 / +2 Query: 297 GSCPTRRATAASTPLGPRMTADWTRAAARERGA 199 G C RR + AS PLG +A +R A R RG+ Sbjct: 503 GECGARRRSCASAPLGSASSARCSRGAPRSRGS 601
>LOC_Os11g36940:12011.t03238:unspliced-genomic glucan endo-1,3-beta-glucosidase 5 precursor, putative, expressed| Length = 1495 Score = 35.4 bits (71), Expect = 0.47 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -3 / +3 Query: 288 PTRRATAASTPLGPRMTADWTRAAA 214 PTRRAT+ +P P+ T W RA A Sbjct: 1311 PTRRATSRGSPSSPKTTGTWRRAPA 1385
>LOC_Os02g50960:12002.t04680:unspliced-genomic auxin efflux carrier component 1, putative, expressed| Length = 3160 Score = 27.2 bits (53), Expect(2) = 1.3 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +3 / +1 Query: 42 PLLPFPASPHAPMAAIYP 95 P P PAS APMA YP Sbjct: 1102 PKYPLPASNAAPMAGHYP 1155 Score = 24.0 bits (46), Expect(2) = 1.3 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = +2 / +1 Query: 170 HYPAPHPLVTA 202 HYPAP+P V++ Sbjct: 1147 HYPAPNPAVSS 1179
>LOC_Os11g09979:12011.t004387:unspliced-genomic expressed protein| Length = 5737 Score = 33.6 bits (67), Expect = 1.7 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 / +2 Query: 182 PHPLVTAPRSLAAARVQSAVIRGPSGVDAAVARRVG 289 P P V AP S+AAA ++AV+ P+ A VA R G Sbjct: 584 PSPTVGAPPSVAAAIEETAVVTEPAPRKAVVASRRG 691
>LOC_Os10g23080:12010.t01785:unspliced-genomic hypothetical protein| Length = 2529 Score = 33.6 bits (67), Expect = 1.7 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = +3 / -2 Query: 21 AASGYLNPLLPFPASPHAPMAAIYPTTAALP 113 A+ G PLLP P P AA PT AALP Sbjct: 2234 ASGGVRTPLLPPSPLPRCPPAAPPPTAAALP 2142
>LOC_Os10g22700:12010.t01749:unspliced-genomic ATP binding protein, putative, expressed| Length = 850 Score = 33.6 bits (67), Expect = 1.7 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +1 / -1 Query: 181 TASPCHRASLSRRRPRP 231 T PC R S+SRRRPRP Sbjct: 103 TPPPCRRRSISRRRPRP 53
>LOC_Os06g43600:12006.t04050:unspliced-genomic 36.4 kDa proline-rich protein, putative, expressed| Length = 1654 Score = 27.2 bits (53), Expect(2) = 2.4 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = +3 / +1 Query: 45 LLPFPASPHAPMAAIYPTTAALPTR 119 LLP PA+P AP A PTR Sbjct: 232 LLPLPATPRAPRTLPLAPPRAPPTR 306 Score = 23.1 bits (44), Expect(2) = 2.4 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = +2 / +1 Query: 176 PAPHPLVTAPRSLAAARVQSAVIRGP 253 P PH PRS +A R + +R P Sbjct: 400 PTPHLRSPPPRSSSARRSPTPHLRSP 477
>LOC_Os03g22330:12003.t01984:unspliced-genomic photolyase/blue-light receptor PHR2, putative, expressed| Length = 3441 Score = 24.9 bits (48), Expect(2) = 3.1 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +3 / +2 Query: 24 ASGYLNPLLPFPASPHAPMAAIYPTTAALPTR 119 AS L+ L PASP A P+T LPT+ Sbjct: 137 ASFSLSLSLRTPASPSPAALASVPSTIHLPTQ 232 Score = 24.9 bits (48), Expect(2) = 3.1 Identities = 14/45 (31%), Positives = 18/45 (40%) Frame = +2 / +1 Query: 170 HYPAPHPLVTAPRSLAAARVQSAVIRGPSGVDAAVARRVGQEPEP 304 H+P PHP + A R R++ V P R V P P Sbjct: 211 HHPPPHPNLHARRLPPPLRLRLRVTLLPPPPQRRRRRVVAPRPAP 345
>LOC_Os09g10780:12009.t03506:unspliced-genomic expressed protein| Length = 637 Score = 32.7 bits (65), Expect = 3.2 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = +2 / +1 Query: 176 PAPHPLVTAPRSLAAARVQSAVIRGPSGVDAAVARRV 286 P P PLV PRS + AR + AV PS AA + V Sbjct: 85 PTPSPLVAVPRSKSYARRRHAVAVPPSKSSAAAIQCV 195
>LOC_Os06g10960:12006.t00973:unspliced-genomic galactoside 2-alpha-L-fucosyltransferase, putative| Length = 4990 Score = 32.7 bits (65), Expect = 3.2 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -3 Query: 291 CPTRRATAASTPLGPRMTADWTRAAAR 211 C TRR + PR A WTR AAR Sbjct: 3713 CCTRRCPGRTAAAAPRAAAAWTRGAAR 3633
>LOC_Os04g53040:12004.t04777:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 11199 Score = 32.7 bits (65), Expect = 3.2 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = +3 / -2 Query: 12 LDKAASGYLNPLLPFPASPHAPMAAIYPTTAALPTR 119 +D AAS P FP+SP AP A T AALP + Sbjct: 2516 VDAAASSPGAPAPAFPSSPGAPRAPAPRTRAALPAQ 2409
>LOC_Os04g44190:12004.t03958:unspliced-genomic expressed protein| Length = 7937 Score = 32.7 bits (65), Expect = 3.2 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = +3 / -1 Query: 12 LDKAASGYLNPLLPFPASPHAPMAAIYPTTAALPTR 119 +D AAS P FP+SP AP A T AALP + Sbjct: 1679 VDAAASSPGAPAPAFPSSPGAPRAPAPRTRAALPAQ 1572
>LOC_Os12g41540:12012.t03830:unspliced-genomic protein kinase, putative, expressed| Length = 2774 Score = 32.2 bits (64), Expect = 4.4 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -3 / +1 Query: 294 SCPTRRATAASTPLGPRMTADWTRAAA 214 +C TRR++A+ T R T+ WTR +A Sbjct: 1828 TCTTRRSSASCTATSSRATSCWTRRSA 1908
>LOC_Os09g19820:12009.t01716:unspliced-genomic aminopeptidase-like protein, putative, expressed| Length = 4189 Score = 32.2 bits (64), Expect = 4.4 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = +3 / +2 Query: 12 LDKAASGYLNPLLPFPASPHAPMAAIYPTTAALPTR 119 +D AAS P FP+SP AP A T AALP + Sbjct: 269 VDAAASSPGAPAPAFPSSPGAPHAPAPRTRAALPAQ 376
>LOC_Os08g31890:12008.t02934:unspliced-genomic conserved hypothetical protein| Length = 1248 Score = 32.2 bits (64), Expect = 4.4 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -3 / +2 Query: 282 RRATAASTPLGPRMTADWTRA 220 RR+TAA+TP G A WTR+ Sbjct: 794 RRSTAATTPTGAASAAGWTRS 856
>LOC_Os07g24120:12007.t02109:unspliced-genomic conserved hypothetical protein| Length = 1085 Score = 32.2 bits (64), Expect = 4.4 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +3 / -3 Query: 42 PLLPFPASPHAPMAAIYPTTAA 107 P LP P PH P+AA PT AA Sbjct: 444 PFLPPPPLPHCPLAAPPPTAAA 379
>LOC_Os07g07130:12007.t04720:unspliced-genomic expressed protein| Length = 11710 Score = 32.2 bits (64), Expect = 4.4 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = -2 / +3 Query: 640 LAYAKMMPYSLMVSMTIPSFPSILSFFLGSYAMAKTSASMDLSA 509 L+ P ++V + +PSFP I++F L S +SAS+ +A Sbjct: 885 LSLVASSPAPVIVVVVLPSFPVIVAFVLSSSRSRPSSASVKCAA 1016
>LOC_Os07g06940:12007.t00573:unspliced-genomic valyl-tRNA synthetase, putative, expressed| Length = 5316 Score = 32.2 bits (64), Expect = 4.4 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 / -1 Query: 685 KKYYNIATVSAPTLELAYAKMMPYSLMVSMTIPSFPSILSFF 560 K+ Y + P + +PYSLMVS +FPS+L F Sbjct: 1512 KRLYKQTWPAVPMESVNLNASVPYSLMVSRGSMTFPSVLDIF 1387
>LOC_Os10g04010:12010.t00290:unspliced-genomic mitogen-activated protein kinase kinase kinase 1, putative| Length = 1578 Score = 27.6 bits (54), Expect(2) = 4.9 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -3 / -3 Query: 288 PTRRATAASTPLGPRMTADWTRAAARERGAV 196 P RRA ++ TP+ P R R GAV Sbjct: 892 PLRRARSSETPMSPSRLLS*DRMTLRRTGAV 800 Score = 24.9 bits (48), Expect(2) = 4.9 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -3 / -3 Query: 510 L*DGRWSCRRCR 475 L* GRW C CR Sbjct: 979 L*SGRWGCSTCR 944
>LOC_Os08g39270:12008.t03659:unspliced-genomic fasciclin-like arabinogalactan protein 7 precursor, putative,| expressed Length = 2145 Score = 31.8 bits (63), Expect = 6.0 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 / +2 Query: 288 PTRRATAASTPLGPRMTADWTRAAARERGA 199 PT R+ AASTP P + WT ++R R + Sbjct: 1571 PTPRSAAASTPPAPSPSTRWTGCSSRCRSS 1660
>LOC_Os08g10560:12008.t00940:unspliced-genomic histone-like transcription factor and archaeal histone family protein| Length = 6203 Score = 31.8 bits (63), Expect = 6.0 Identities = 16/50 (32%), Positives = 19/50 (38%) Frame = +2 / +2 Query: 476 RQRLQDHRPSHSXXXXXXXXXXXXXXAQEEREDRGEARDCHRHH*GVWHH 625 RQ L+D P H A EER G+ D H G +HH Sbjct: 5834 RQGLRDVHPGHDAAVLAAHRGGQEEDAAEERRRGGDQEDRHLRFLGGYHH 5983
>LOC_Os03g11410:12003.t00941:unspliced-genomic mitochondrial-processing peptidase beta subunit, mitochondrial| precursor, putative, expressed Length = 4661 Score = 31.8 bits (63), Expect = 6.0 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 / +1 Query: 749 ITKSSSSI*DKLNKNSYMDQTKEILQHSNCFCSYIGTCLC 630 I S+ S + LN ++ T +L+ S CFC Y+ C+C Sbjct: 2476 ILASAFSSNEVLNLITWHRYTHGLLR*SGCFCVYVCVCVC 2595
>LOC_Os02g54200:12002.t04999:unspliced-genomic mTERF family protein, expressed| Length = 3654 Score = 31.8 bits (63), Expect = 6.0 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +3 / -3 Query: 231 NRRSFVVRAAWTRRSRGELDKSPNRKSWKQRTDMYMR 341 N RS + R W R+ GEL+ S ++ W D +++ Sbjct: 3637 NARSALQRGIWQCRAHGELETSMEQRKWSWTPD*WIK 3527
>LOC_Os02g48130:12002.t04397:unspliced-genomic anion-transporting ATPase, putative, expressed| Length = 2414 Score = 25.4 bits (49), Expect(2) = 7.6 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +2 / -3 Query: 245 RGPSGVDAAVARRVGQEPEP 304 R P G+ + A RVG+ P P Sbjct: 108 RDPIGIPGSPAARVGEPPRP 49 Score = 23.1 bits (44), Expect(2) = 7.6 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +1 / -1 Query: 187 SPCHRASLSRRRPRP 231 +P +A RRRPRP Sbjct: 236 APAEQAMTRRRRPRP 192
>LOC_Os12g25360:12012.t02258:unspliced-genomic hypothetical protein| Length = 1536 Score = 31.3 bits (62), Expect = 8.2 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = +2 / -2 Query: 176 PAPHPLVTAPRSLAAARVQSAVIRGPSGVDAAVARRVGQEPEP 304 P PHP A + R + + P RRVGQ+P P Sbjct: 482 PRPHPFAAASATSPLCRRRRRLAPSPQPPPLRRRRRVGQQPPP 354
>LOC_Os10g01820:12010.t03534:unspliced-genomic expressed protein| Length = 4160 Score = 31.3 bits (62), Expect = 8.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 / +3 Query: 45 LLPFPASPHAPMAAIYPTTAAL 110 L+PFPA+ H P+ YP AL Sbjct: 864 LIPFPANTHTPLGCRYPFCLAL 929
>LOC_Os04g44900:12004.t04027:unspliced-genomic lectin-like receptor kinase 7, putative, expressed| Length = 2540 Score = 31.3 bits (62), Expect = 8.2 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -3 / -3 Query: 294 SCPTRRATAASTPLGPRMTADWTRAAARERGA 199 +CP R + TP G R A +RAAAR GA Sbjct: 1599 ACPGCRWACSRTPAGARPCAGSSRAAARGSGA 1504
>LOC_Os01g56820:12001.t05092:unspliced-genomic expressed protein| Length = 4345 Score = 31.3 bits (62), Expect = 8.2 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +2 / +3 Query: 647 CRSRNSCYVVVFL*FDPCSCFC 712 C S CYV F+ F CSCFC Sbjct: 1584 CISTLYCYVSSFVSFYECSCFC 1649
>LOC_Os08g22054:12008.t01992:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6847 Score = 29.5 bits (58), Expect(2) = 9.7 Identities = 8/16 (50%), Positives = 14/16 (87%) Frame = -2 / +3 Query: 403 PRCMTLAWTKRLEKKT 356 PRC T+ WT++LE+++ Sbjct: 6504 PRCPTITWTRQLEERS 6551 Score = 24.0 bits (46), Expect(2) = 9.7 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -2 / +2 Query: 601 SMTIPSFPSILSFFLGSYAMAKTSASMDLS 512 + +IPSF SFFL + A S+ LS Sbjct: 4568 TFSIPSFSFPFSFFLQADASLSLCLSLSLS 4657 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 199,821,902 Number of extensions: 2325449 Number of successful extensions: 16685 Number of sequences better than 10.0: 36 Length of query: 256 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 207 Effective length of database: 52,856,264 Effective search space: 10941246648 Effective search space used: 10941246648 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)