ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf40m24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT832122.1| Oryza sativa (indica cultivar-group) cDNA clone:... 519 e-144
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 519 e-144
3dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic D... 519 e-144
4dbj|AK072634.1| Oryza sativa (japonica cultivar-group) cDNA clon... 519 e-144
5ref|NM_001054320.1| Oryza sativa (japonica cultivar-group) Os02g... 244 4e-61
6dbj|AK063776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 4e-61
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 141 4e-30
8dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic D... 141 4e-30
9ref|NM_001071907.1| Oryza sativa (japonica cultivar-group) Os10g... 46 0.19
10ref|NM_001064751.1| Oryza sativa (japonica cultivar-group) Os06g... 46 0.19
11ref|NM_001062563.1| Oryza sativa (japonica cultivar-group) Os05g... 46 0.19
12tpg|BK005031.1| TPA_inf: Oryza sativa (japonica cultivar-group) ... 46 0.19
13gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome... 46 0.19
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.19
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.19
16gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 gen... 46 0.19
17dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.19
18dbj|AK119644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.19
19dbj|AK106282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.19
20dbj|AK070091.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.19
21ref|XM_365502.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 0.73
22emb|AJ579366.1|CRE579366 Chlamydomonas reinhardtii mRNA for aspa... 44 0.73
23gb|AC090023.20| Homo sapiens 12 BAC RP11-221N13 (Roswell Park Ca... 44 0.73
24gb|AC188706.4| Pan troglodytes BAC clone CH251-587H8 from chromo... 42 2.9
25gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome 42 2.9
26ref|XR_009670.1| PREDICTED: Macaca mulatta adaptor-related prote... 42 2.9
27gb|DQ510081.1| Uncultured bacterium clone Toolik_Jun2005_shrubor... 42 2.9
28ref|XM_864628.1| PREDICTED: Bos taurus similar to Adapter-relate... 42 2.9
29gb|AC146004.3| Pan troglodytes BAC clone RP43-161E12 from 7, com... 42 2.9
30ref|XM_535479.2| PREDICTED: Canis familiaris similar to Adapter-... 42 2.9
31gb|AC005030.1| Homo sapiens BAC clone GS1-589P19 from 7, complet... 42 2.9
32gb|AC023844.6| Homo sapiens chromosome 15, clone RP11-427O16, co... 42 2.9
33ref|NW_001081896.1| Leishmania major strain Friedlin chromosome ... 42 2.9
34ref|NM_001021183.1| Schizosaccharomyces pombe 972h- polyprenyl s... 42 2.9
35emb|BX295540.1|NC49D12 Neurospora crassa DNA linkage group VI Co... 42 2.9
36gb|AC021677.4|AC021677 Homo sapiens chromosome 15, clone RP11-62... 42 2.9
37ref|XM_952543.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.9
38dbj|D84311.1| Schizosaccharomyces pombe dps1 mRNA for decaprenyl... 42 2.9
39emb|AL136498.2|SPBPJ694 S.pombe chromosome II PCR product pJ694 42 2.9 
>emb|CT832122.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA042O09, full
           insert sequence
          Length = 706
 Score =  519 bits (262), Expect = e-144
 Identities = 364/398 (91%)
 Strand = Plus / Plus

                                                                       
Query: 246 gtggtccgagcggcgtggacgcggcggtcgcgcggcgagttggacaagagcccgaaccgc 305
           ||||| || |||||||||||||||||||||||    |||  |||  |||| || ||||||
Sbjct: 201 gtggtgcgcgcggcgtggacgcggcggtcgcggaaggaggcggaggagaggcccaaccgc 260

                                                                       
Query: 306 aagtcgtggaagcagcgcacggacatgtacatgcgcccgttcctgctcaacgtcttcttc 365
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 aagtcgtggaagcagcgcacggacatgtacatgcggccgttcctgctcaacgtcttcttc 320

                                                                       
Query: 366 tccaagcgcttcgtccacgccaaggtcatgcaccggggcaccagcaaggttatcgccgtc 425
           ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||
Sbjct: 321 tccaagcgcttcgtccacgccaaggtcgtgcacaggggcaccagcaaggtcatctccgtc 380

                                                                       
Query: 426 gccaccaccaacgccaaggacctcaggaccacgctgccgtccctcatagacgacaacgcc 485
           |||| ||||||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 381 gccagcaccaacgccaaggacctcaggaccacgctgccctccctcgtcgacgacaacgcc 440

                                                                       
Query: 486 tgcaggaccatcggccgtctcatagccgagaggtccatggacgccgacgtcttcgccatg 545
           ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcaggaccatcggccgcctcatcgccgagaggtccatggacgccgacgtcttcgccatg 500

                                                                       
Query: 546 gcgtacgagcccaagaagaacgagaggatcgaggggaagctcgggattgtcatcgacacc 605
            | |||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 501 tcctacgagcccaagaagaacgagaggatcgaggggaagcttggcatcgtcatcgacacc 560

                                                 
Query: 606 attaaggagtatggcatcatctttgcataggcaagttc 643
           ||||||||| | ||||| || ||||  |||||||||||
Sbjct: 561 attaaggagcacggcattatatttgtttaggcaagttc 598



 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 66 ccccacgctcccatggccgcc 86
          |||||||||||||||||||||
Sbjct: 33 ccccacgctcccatggccgcc 53
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  519 bits (262), Expect = e-144
 Identities = 364/398 (91%)
 Strand = Plus / Minus

                                                                            
Query: 246      gtggtccgagcggcgtggacgcggcggtcgcgcggcgagttggacaagagcccgaaccgc 305
                ||||| || |||||||||||||||||||||||    |||  |||  |||| || ||||||
Sbjct: 28309976 gtggtgcgcgcggcgtggacgcggcggtcgcggaaggaggcggaggagaggcccaaccgc 28309917

                                                                            
Query: 306      aagtcgtggaagcagcgcacggacatgtacatgcgcccgttcctgctcaacgtcttcttc 365
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 28309916 aagtcgtggaagcagcgcacggacatgtacatgcggccgttcctgctcaacgtcttcttc 28309857

                                                                            
Query: 366      tccaagcgcttcgtccacgccaaggtcatgcaccggggcaccagcaaggttatcgccgtc 425
                ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||
Sbjct: 28309856 tccaagcgcttcgtccacgccaaggtcgtgcacaggggcaccagcaaggtcatctccgtc 28309797

                                                                            
Query: 426      gccaccaccaacgccaaggacctcaggaccacgctgccgtccctcatagacgacaacgcc 485
                |||| ||||||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 28309796 gccagcaccaacgccaaggacctcaggaccacgctgccctccctcgtcgacgacaacgcc 28309737

                                                                            
Query: 486      tgcaggaccatcggccgtctcatagccgagaggtccatggacgccgacgtcttcgccatg 545
                ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 28309736 tgcaggaccatcggccgcctcatcgccgagaggtccatggacgccgacgtcttcgccatg 28309677

                                                                            
Query: 546      gcgtacgagcccaagaagaacgagaggatcgaggggaagctcgggattgtcatcgacacc 605
                 | |||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 28309676 tcctacgagcccaagaagaacgagaggatcgaggggaagcttggcatcgtcatcgacacc 28309617

                                                      
Query: 606      attaaggagtatggcatcatctttgcataggcaagttc 643
                ||||||||| | ||||| || ||||  |||||||||||
Sbjct: 28309616 attaaggagcacggcattatatttgtttaggcaagttc 28309579



 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 66       ccccacgctcccatggccgcc 86
                |||||||||||||||||||||
Sbjct: 28310144 ccccacgctcccatggccgcc 28310124
to top
>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1743_B12
          Length = 175645

 Score =  519 bits (262), Expect = e-144
 Identities = 364/398 (91%)
 Strand = Plus / Minus

                                                                          
Query: 246    gtggtccgagcggcgtggacgcggcggtcgcgcggcgagttggacaagagcccgaaccgc 305
              ||||| || |||||||||||||||||||||||    |||  |||  |||| || ||||||
Sbjct: 101733 gtggtgcgcgcggcgtggacgcggcggtcgcggaaggaggcggaggagaggcccaaccgc 101674

                                                                          
Query: 306    aagtcgtggaagcagcgcacggacatgtacatgcgcccgttcctgctcaacgtcttcttc 365
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 101673 aagtcgtggaagcagcgcacggacatgtacatgcggccgttcctgctcaacgtcttcttc 101614

                                                                          
Query: 366    tccaagcgcttcgtccacgccaaggtcatgcaccggggcaccagcaaggttatcgccgtc 425
              ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||
Sbjct: 101613 tccaagcgcttcgtccacgccaaggtcgtgcacaggggcaccagcaaggtcatctccgtc 101554

                                                                          
Query: 426    gccaccaccaacgccaaggacctcaggaccacgctgccgtccctcatagacgacaacgcc 485
              |||| ||||||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 101553 gccagcaccaacgccaaggacctcaggaccacgctgccctccctcgtcgacgacaacgcc 101494

                                                                          
Query: 486    tgcaggaccatcggccgtctcatagccgagaggtccatggacgccgacgtcttcgccatg 545
              ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 101493 tgcaggaccatcggccgcctcatcgccgagaggtccatggacgccgacgtcttcgccatg 101434

                                                                          
Query: 546    gcgtacgagcccaagaagaacgagaggatcgaggggaagctcgggattgtcatcgacacc 605
               | |||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 101433 tcctacgagcccaagaagaacgagaggatcgaggggaagcttggcatcgtcatcgacacc 101374

                                                    
Query: 606    attaaggagtatggcatcatctttgcataggcaagttc 643
              ||||||||| | ||||| || ||||  |||||||||||
Sbjct: 101373 attaaggagcacggcattatatttgtttaggcaagttc 101336



 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     ccccacgctcccatggccgcc 86
              |||||||||||||||||||||
Sbjct: 101901 ccccacgctcccatggccgcc 101881
to top
>dbj|AK072634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132I06, full
           insert sequence
          Length = 979

 Score =  519 bits (262), Expect = e-144
 Identities = 364/398 (91%)
 Strand = Plus / Plus

                                                                       
Query: 246 gtggtccgagcggcgtggacgcggcggtcgcgcggcgagttggacaagagcccgaaccgc 305
           ||||| || |||||||||||||||||||||||    |||  |||  |||| || ||||||
Sbjct: 196 gtggtgcgcgcggcgtggacgcggcggtcgcggaaggaggcggaggagaggcccaaccgc 255

                                                                       
Query: 306 aagtcgtggaagcagcgcacggacatgtacatgcgcccgttcctgctcaacgtcttcttc 365
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 256 aagtcgtggaagcagcgcacggacatgtacatgcggccgttcctgctcaacgtcttcttc 315

                                                                       
Query: 366 tccaagcgcttcgtccacgccaaggtcatgcaccggggcaccagcaaggttatcgccgtc 425
           ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||
Sbjct: 316 tccaagcgcttcgtccacgccaaggtcgtgcacaggggcaccagcaaggtcatctccgtc 375

                                                                       
Query: 426 gccaccaccaacgccaaggacctcaggaccacgctgccgtccctcatagacgacaacgcc 485
           |||| ||||||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 376 gccagcaccaacgccaaggacctcaggaccacgctgccctccctcgtcgacgacaacgcc 435

                                                                       
Query: 486 tgcaggaccatcggccgtctcatagccgagaggtccatggacgccgacgtcttcgccatg 545
           ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 436 tgcaggaccatcggccgcctcatcgccgagaggtccatggacgccgacgtcttcgccatg 495

                                                                       
Query: 546 gcgtacgagcccaagaagaacgagaggatcgaggggaagctcgggattgtcatcgacacc 605
            | |||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 496 tcctacgagcccaagaagaacgagaggatcgaggggaagcttggcatcgtcatcgacacc 555

                                                 
Query: 606 attaaggagtatggcatcatctttgcataggcaagttc 643
           ||||||||| | ||||| || ||||  |||||||||||
Sbjct: 556 attaaggagcacggcattatatttgtttaggcaagttc 593



 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 66 ccccacgctcccatggccgcc 86
          |||||||||||||||||||||
Sbjct: 28 ccccacgctcccatggccgcc 48
to top
>ref|NM_001054320.1| Oryza sativa (japonica cultivar-group) Os02g0689700 (Os02g0689700)
           mRNA, partial cds
          Length = 496

 Score =  244 bits (123), Expect = 4e-61
 Identities = 171/187 (91%)
 Strand = Plus / Plus

                                                                       
Query: 457 cgctgccgtccctcatagacgacaacgcctgcaggaccatcggccgtctcatagccgaga 516
           ||||||| |||||| | ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 1   cgctgccctccctcgtcgacgacaacgcctgcaggaccatcggccgcctcatcgccgaga 60

                                                                       
Query: 517 ggtccatggacgccgacgtcttcgccatggcgtacgagcccaagaagaacgagaggatcg 576
           ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 61  ggtccatggacgccgacgtcttcgccatgtcctacgagcccaagaagaacgagaggatcg 120

                                                                       
Query: 577 aggggaagctcgggattgtcatcgacaccattaaggagtatggcatcatctttgcatagg 636
           |||||||||| || || ||||||||||||||||||||| | ||||| || ||||  ||||
Sbjct: 121 aggggaagcttggcatcgtcatcgacaccattaaggagcacggcattatatttgtttagg 180

                  
Query: 637 caagttc 643
           |||||||
Sbjct: 181 caagttc 187
to top
>dbj|AK063776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-D02, full
           insert sequence
          Length = 496

 Score =  244 bits (123), Expect = 4e-61
 Identities = 171/187 (91%)
 Strand = Plus / Plus

                                                                       
Query: 457 cgctgccgtccctcatagacgacaacgcctgcaggaccatcggccgtctcatagccgaga 516
           ||||||| |||||| | ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 1   cgctgccctccctcgtcgacgacaacgcctgcaggaccatcggccgcctcatcgccgaga 60

                                                                       
Query: 517 ggtccatggacgccgacgtcttcgccatggcgtacgagcccaagaagaacgagaggatcg 576
           ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 61  ggtccatggacgccgacgtcttcgccatgtcctacgagcccaagaagaacgagaggatcg 120

                                                                       
Query: 577 aggggaagctcgggattgtcatcgacaccattaaggagtatggcatcatctttgcatagg 636
           |||||||||| || || ||||||||||||||||||||| | ||||| || ||||  ||||
Sbjct: 121 aggggaagcttggcatcgtcatcgacaccattaaggagcacggcattatatttgtttagg 180

                  
Query: 637 caagttc 643
           |||||||
Sbjct: 181 caagttc 187
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  141 bits (71), Expect = 4e-30
 Identities = 101/111 (90%)
 Strand = Plus / Minus

                                                                            
Query: 300      aaccgcaagtcgtggaagcagcgcacggacatgtacatgcgcccgttcctgctcaacgtc 359
                ||||||||||| || |||||| ||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 17709142 aaccgcaagtcatgtaagcagtgcatggacatgtacatgcggccgtttctgctcaacgtc 17709083

                                                                   
Query: 360      ttcttctccaagcgcttcgtccacgccaaggtcatgcaccggggcaccagc 410
                |||||||||||||| |||||||||||||||||  ||||| |||||||||||
Sbjct: 17709082 ttcttctccaagcgattcgtccacgccaaggttgtgcacaggggcaccagc 17709032



 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 364      tctccaagcgcttcgtccacgcc 386
                |||||||||||||||||||||||
Sbjct: 26127240 tctccaagcgcttcgtccacgcc 26127218
to top
>dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1288_C01
          Length = 111223

 Score =  141 bits (71), Expect = 4e-30
 Identities = 101/111 (90%)
 Strand = Plus / Minus

                                                                         
Query: 300   aaccgcaagtcgtggaagcagcgcacggacatgtacatgcgcccgttcctgctcaacgtc 359
             ||||||||||| || |||||| ||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 87040 aaccgcaagtcatgtaagcagtgcatggacatgtacatgcggccgtttctgctcaacgtc 86981

                                                                
Query: 360   ttcttctccaagcgcttcgtccacgccaaggtcatgcaccggggcaccagc 410
             |||||||||||||| |||||||||||||||||  ||||| |||||||||||
Sbjct: 86980 ttcttctccaagcgattcgtccacgccaaggttgtgcacaggggcaccagc 86930
to top
>ref|NM_001071907.1| Oryza sativa (japonica cultivar-group) Os10g0559900 (Os10g0559900)
           mRNA, complete cds
          Length = 1002

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 350 gctcaacgtcttcttctccaagcgcttcgtc 380
           |||| |||||||| |||||||||||||||||
Sbjct: 576 gctcgacgtcttcatctccaagcgcttcgtc 606
to top
>ref|NM_001064751.1| Oryza sativa (japonica cultivar-group) Os06g0649000 (Os06g0649000)
           mRNA, partial cds
          Length = 1413

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 364 tctccaagcgcttcgtccacgcc 386
           |||||||||||||||||||||||
Sbjct: 608 tctccaagcgcttcgtccacgcc 630
to top
>ref|NM_001062563.1| Oryza sativa (japonica cultivar-group) Os05g0513500 (Os05g0513500)
           mRNA, complete cds
          Length = 420

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 201 cgcctcgctctctcgccgccgcc 223
           |||||||||||||||||||||||
Sbjct: 95  cgcctcgctctctcgccgccgcc 117
to top
>tpg|BK005031.1| TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription
            factor 28 (WRKY28) gene, complete cds
          Length = 4123

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 364  tctccaagcgcttcgtccacgcc 386
            |||||||||||||||||||||||
Sbjct: 3552 tctccaagcgcttcgtccacgcc 3574
to top
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07,
              complete sequence
          Length = 146712

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 201    cgcctcgctctctcgccgccgcc 223
              |||||||||||||||||||||||
Sbjct: 125205 cgcctcgctctctcgccgccgcc 125227
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 350      gctcaacgtcttcttctccaagcgcttcgtc 380
                |||| |||||||| |||||||||||||||||
Sbjct: 21528445 gctcgacgtcttcatctccaagcgcttcgtc 21528475
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 201      cgcctcgctctctcgccgccgcc 223
                |||||||||||||||||||||||
Sbjct: 25262364 cgcctcgctctctcgccgccgcc 25262386
to top
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
             sequence
          Length = 144191

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 350   gctcaacgtcttcttctccaagcgcttcgtc 380
             |||| |||||||| |||||||||||||||||
Sbjct: 81612 gctcgacgtcttcatctccaagcgcttcgtc 81582
to top
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0062J02
          Length = 151636

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 364    tctccaagcgcttcgtccacgcc 386
              |||||||||||||||||||||||
Sbjct: 106485 tctccaagcgcttcgtccacgcc 106463
to top
>dbj|AK119644.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-G04, full
           insert sequence
          Length = 1335

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 364 tctccaagcgcttcgtccacgcc 386
           |||||||||||||||||||||||
Sbjct: 530 tctccaagcgcttcgtccacgcc 552
to top
>dbj|AK106282.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-A04, full
           insert sequence
          Length = 1413

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 364 tctccaagcgcttcgtccacgcc 386
           |||||||||||||||||||||||
Sbjct: 608 tctccaagcgcttcgtccacgcc 630
to top
>dbj|AK070091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040K18, full
           insert sequence
          Length = 1003

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 350 gctcaacgtcttcttctccaagcgcttcgtc 380
           |||| |||||||| |||||||||||||||||
Sbjct: 577 gctcgacgtcttcatctccaagcgcttcgtc 607
to top
>ref|XM_365502.1| Magnaporthe grisea 70-15 hypothetical protein (MG02204.4) partial
            mRNA
          Length = 1614

 Score = 44.1 bits (22), Expect = 0.73
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 423  gtcgccaccaccaacgccaagg 444
            ||||||||||||||||||||||
Sbjct: 1322 gtcgccaccaccaacgccaagg 1301
to top
>emb|AJ579366.1|CRE579366 Chlamydomonas reinhardtii mRNA for aspartic proteinase (chlapsin
            gene)
          Length = 2443

 Score = 44.1 bits (22), Expect = 0.73
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 211  tctcgccgccgcccgcgtccaa 232
            ||||||||||||||||||||||
Sbjct: 1743 tctcgccgccgcccgcgtccaa 1722
to top
>gb|AC090023.20| Homo sapiens 12 BAC RP11-221N13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 114177

 Score = 44.1 bits (22), Expect = 0.73
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 80    ggccgccatttaccccaccacggccgccct 109
             ||||||||||| ||||||||||||| ||||
Sbjct: 92497 ggccgccattttccccaccacggcctccct 92526
to top
>gb|AC188706.4| Pan troglodytes BAC clone CH251-587H8 from chromosome 7, complete
              sequence
          Length = 220928

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 722    cttatattgatgatgatgatt 742
              |||||||||||||||||||||
Sbjct: 162494 cttatattgatgatgatgatt 162474
to top
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome
          Length = 5505494

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 256     cggcgtggacgcggcggtcgcgcgg 280
               ||||||||| |||||||||||||||
Sbjct: 1403183 cggcgtggaagcggcggtcgcgcgg 1403159
to top
>ref|XR_009670.1| PREDICTED: Macaca mulatta adaptor-related protein complex 4,
           epsilon 1 subunit (AP4E1), mRNA
          Length = 6708

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 648 gtaggagcagaaacagttgct 668
           |||||||||||||||||||||
Sbjct: 212 gtaggagcagaaacagttgct 192
to top
>gb|DQ510081.1| Uncultured bacterium clone Toolik_Jun2005_shruborg_188 16S
           ribosomal RNA gene, partial sequence
          Length = 697

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 304 gcaagtcgtggaagcagcgca 324
           |||||||||||||||||||||
Sbjct: 18  gcaagtcgtggaagcagcgca 38
to top
>ref|XM_864628.1| PREDICTED: Bos taurus similar to Adapter-related protein complex 4
           epsilon 1 subunit (Epsilon subunit of AP-4) (AP-4
           adapter complex epsilon subunit) (LOC613640), mRNA
          Length = 1353

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 648 gtaggagcagaaacagttgct 668
           |||||||||||||||||||||
Sbjct: 212 gtaggagcagaaacagttgct 192
to top
>gb|AC146004.3| Pan troglodytes BAC clone RP43-161E12 from 7, complete sequence
          Length = 129417

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 722    cttatattgatgatgatgatt 742
              |||||||||||||||||||||
Sbjct: 128578 cttatattgatgatgatgatt 128598
to top
>ref|XM_535479.2| PREDICTED: Canis familiaris similar to Adapter-related protein
           complex 4 epsilon 1 subunit (Epsilon subunit of AP-4)
           (AP-4 adapter complex epsilon subunit) (LOC478304), mRNA
          Length = 4153

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 648 gtaggagcagaaacagttgct 668
           |||||||||||||||||||||
Sbjct: 247 gtaggagcagaaacagttgct 227
to top
>gb|AC005030.1| Homo sapiens BAC clone GS1-589P19 from 7, complete sequence
          Length = 148915

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 722    cttatattgatgatgatgatt 742
              |||||||||||||||||||||
Sbjct: 146341 cttatattgatgatgatgatt 146361
to top
>gb|AC023844.6| Homo sapiens chromosome 15, clone RP11-427O16, complete sequence
          Length = 188788

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 119    ccactcccctccttccttcct 139
              |||||||||||||||||||||
Sbjct: 132697 ccactcccctccttccttcct 132717
to top
>ref|NW_001081896.1| Leishmania major strain Friedlin chromosome 4, right end
 emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end
          Length = 247462

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 203    cctcgctctctcgccgccgcc 223
              |||||||||||||||||||||
Sbjct: 168103 cctcgctctctcgccgccgcc 168083
to top
>ref|NM_001021183.1| Schizosaccharomyces pombe 972h- polyprenyl synthetase
           (SPBPJ4664.01), partial mRNA
          Length = 1137

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 724 tatattgatgatgatgattta 744
           |||||||||||||||||||||
Sbjct: 301 tatattgatgatgatgattta 321
to top
>emb|BX295540.1|NC49D12 Neurospora crassa DNA linkage group VI Cosmid contig 49D12
          Length = 95032

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 206   cgctctctcgccgccgcccgc 226
             |||||||||||||||||||||
Sbjct: 82028 cgctctctcgccgccgcccgc 82048
to top
>gb|AC021677.4|AC021677 Homo sapiens chromosome 15, clone RP11-62D2, complete sequence
          Length = 177762

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 119    ccactcccctccttccttcct 139
              |||||||||||||||||||||
Sbjct: 120431 ccactcccctccttccttcct 120451
to top
>ref|XM_952543.1| Neurospora crassa OR74A hypothetical protein (NCU04021.1) partial
            mRNA
          Length = 4935

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 206  cgctctctcgccgccgcccgc 226
            |||||||||||||||||||||
Sbjct: 4069 cgctctctcgccgccgcccgc 4089
to top
>dbj|D84311.1| Schizosaccharomyces pombe dps1 mRNA for decaprenyl diphosphate
           synthase subunit 1, complete cds
          Length = 2214

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 724 tatattgatgatgatgattta 744
           |||||||||||||||||||||
Sbjct: 647 tatattgatgatgatgattta 667
to top
>emb|AL136498.2|SPBPJ694 S.pombe chromosome II PCR product pJ694
          Length = 2097

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 724  tatattgatgatgatgattta 744
            |||||||||||||||||||||
Sbjct: 1156 tatattgatgatgatgattta 1176


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 111,911,087
Number of extensions: 7075127
Number of successful extensions: 187286
Number of sequences better than 10.0: 39
Number of HSP's gapped: 187286
Number of HSP's successfully gapped: 48
Length of query: 770
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 748
Effective length of database: 18,508,616,841
Effective search space: 13844445397068
Effective search space used: 13844445397068
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top