ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf37k18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P83690:NFCP_MONEF GFP-like non-fluorescent chromoprotein - Monti... 30 5.4
2Q4U0G1:CLAP1_XENLA CLIP-associating protein 1 - Xenopus laevis (... 30 7.2
3Q2UQ97:SLD2_ASPOR DNA replication regulator sld2 - Aspergillus o... 29 9.4

>P83690:NFCP_MONEF GFP-like non-fluorescent chromoprotein - Montipora efflorescens|
           (Coral)
          Length = 221
 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -2

Query: 497 GGHRCKHGKALCCQKYPARPQGQE-LDRSIPITHHPKNYTSMKEVQ 363
           GGH     K     K P +  G   +DR + +T+H K+YTS+++ +
Sbjct: 166 GGHYLCEFKTTYKAKKPVKMPGYHYVDRKLDVTNHNKDYTSVEQCE 211



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>Q4U0G1:CLAP1_XENLA CLIP-associating protein 1 - Xenopus laevis (African clawed frog)|
          Length = 1468

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 519  GKDMLGGGRAPMQTRQGSLLPKVSSAPTRPRTRSINPY 406
            G DM+ GGR  +  +   L  +   A T PR R  NPY
Sbjct: 1160 GTDMVEGGRMALDNKTSLLNTQPPRAFTGPRGREYNPY 1197



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>Q2UQ97:SLD2_ASPOR DNA replication regulator sld2 - Aspergillus oryzae|
          Length = 527

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 516 KDMLGGGRAPMQTRQGSLLPKVSSAPTRPRTRSINP 409
           +D +G    P   +Q    PKV    T+PR R +NP
Sbjct: 464 RDAIGVVEPPPAEKQEKPQPKVKEKQTKPRERKVNP 499


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 89,141,601
Number of extensions: 1791611
Number of successful extensions: 5000
Number of sequences better than 10.0: 3
Number of HSP's gapped: 4999
Number of HSP's successfully gapped: 3
Length of query: 182
Length of database: 100,686,439
Length adjustment: 106
Effective length of query: 76
Effective length of database: 71,611,169
Effective search space: 5442448844
Effective search space used: 5442448844
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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