ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf37k16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os11g0634500:Os11g0634500 | 126 | 3e-29 | 2 | AK059123:Os12g0508300 | 126 | 3e-29 | 3 | AK102025:Os03g0111100 | 31 | 1.6 | 4 | AJ133787:Os01g0182600 | 29 | 4.7 | 5 | AK100147:Os01g0182600 | 29 | 4.7 | 6 | AK072166:Os01g0182600 | 29 | 4.7 | 7 | AK067038:Os01g0182600 | 29 | 4.7 | 8 | Os03g0285000:Os03g0285000 | 28 | 8.1 | 9 | AK072481:Os10g0503200 | 28 | 8.1 | 10 | AK069437:Os04g0524600 | 28 | 8.1 |
|---|
>Os11g0634500:Os11g0634500 | Length = 56 Score = 126 bits (316), Expect = 3e-29 Identities = 54/56 (96%), Positives = 54/56 (96%) Frame = +3 Query: 75 MGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFHSNAKDIGFIKYR 242 MGHSNVWNSHPKNYGPGSRVCRVCGN HGLIRKYGLMCCRQCF SNAKDIGFIKYR Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56
>AK059123:Os12g0508300 | Length = 56 Score = 126 bits (316), Expect = 3e-29 Identities = 54/56 (96%), Positives = 54/56 (96%) Frame = +3 Query: 75 MGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFHSNAKDIGFIKYR 242 MGHSNVWNSHPKNYGPGSRVCRVCGN HGLIRKYGLMCCRQCF SNAKDIGFIKYR Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56
>AK102025:Os03g0111100 | Length = 554 Score = 30.8 bits (68), Expect = 1.6 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +3 Query: 132 VCRVCGNSHGLIRKYGLMCCRQCFHSNAKDIG---FIKYR*FTWSW 260 + R CG S GL LM R+ F N DI F+KY F W W Sbjct: 125 ILRSCGFSTGLFTSPHLMDVRERFRLNGVDISEEKFLKY--FWWCW 168
>AJ133787:Os01g0182600 | Length = 976 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 719 VCLNNWLSIWQILILPSVKEMSFEENRIHKV*RNVLISLCNVNSLQP 859 +C + +WQ LI +MS E H+ R V+ +LC++ S P Sbjct: 715 LCFSVVSLLWQKLIASPEMQMSAESTSAHQGWRKVVDALCDIVSASP 761
>AK100147:Os01g0182600 | Length = 1088 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 719 VCLNNWLSIWQILILPSVKEMSFEENRIHKV*RNVLISLCNVNSLQP 859 +C + +WQ LI +MS E H+ R V+ +LC++ S P Sbjct: 899 LCFSVVSLLWQKLIASPEMQMSAESTSAHQGWRKVVDALCDIVSASP 945
>AK072166:Os01g0182600 | Length = 1160 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 719 VCLNNWLSIWQILILPSVKEMSFEENRIHKV*RNVLISLCNVNSLQP 859 +C + +WQ LI +MS E H+ R V+ +LC++ S P Sbjct: 899 LCFSVVSLLWQKLIASPEMQMSAESTSAHQGWRKVVDALCDIVSASP 945
>AK067038:Os01g0182600 | Length = 1160 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 719 VCLNNWLSIWQILILPSVKEMSFEENRIHKV*RNVLISLCNVNSLQP 859 +C + +WQ LI +MS E H+ R V+ +LC++ S P Sbjct: 899 LCFSVVSLLWQKLIASPEMQMSAESTSAHQGWRKVVDALCDIVSASP 945
>Os03g0285000:Os03g0285000 | Length = 2326 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%) Frame = -2 Query: 661 ASEILFGVCMPTHFF*EASFMHHFFMECIPS-----WLRWLHICN 542 A +L G C+P HF+ EA F ++ + PS + + H+C+ Sbjct: 2098 ARALLLGSCVPPHFWAEAVFTANYLVNIQPSSALHGGIPYEHLCS 2142
>AK072481:Os10g0503200 | Length = 577 Score = 28.5 bits (62), Expect = 8.1 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Frame = +3 Query: 132 VCRVCGNSHGLIRKYGLMCCRQCFHSNAKDIG---FIKYR*FTWSW 260 + R CG GL LM R+ F N DI FI+Y F W W Sbjct: 170 ILRSCGFRTGLFTSPHLMDVRERFRLNGLDISEEKFIRY--FWWCW 213
>AK069437:Os04g0524600 | Length = 576 Score = 28.5 bits (62), Expect = 8.1 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +1 Query: 904 TYWCIDLF*SVGSIILFFWEMM 969 +Y+ ID+F +G++ILF WEM+ Sbjct: 499 SYFAIDMF--IGTVILFVWEMV 518 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 25,712,372 Number of extensions: 550199 Number of successful extensions: 1277 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1274 Number of HSP's successfully gapped: 10 Length of query: 342 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 241 Effective length of database: 11,355,714 Effective search space: 2736727074 Effective search space used: 2736727074 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
