ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf37i04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q88NU6:QUIP_PSEPK Acyl-homoserine lactone acylase quiP precursor... 31 8.0

>Q88NU6:QUIP_PSEPK Acyl-homoserine lactone acylase quiP precursor - Pseudomonas putida|
           (strain KT2440)
          Length = 813
 Score = 30.8 bits (68), Expect = 8.0
 Identities = 22/72 (30%), Positives = 29/72 (40%)
 Frame = -3

Query: 325 EAAARSPEDQWRVTEAANMDQSARRAMATRAHALYRPFXXXXXXXXXXTETGMEILVAGV 146
           E A     D  R+  AAN+ QSA +  A  +  L R F               + L AG+
Sbjct: 102 ELAGSEALDIDRLMRAANLKQSAAQQYADASPRLKRFFEVYARGVNAYLFRYRDKLPAGL 161

Query: 145 GEGGWTPWYWWP 110
              G+ P YW P
Sbjct: 162 ASSGYRPEYWKP 173


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 143,587,499
Number of extensions: 2879767
Number of successful extensions: 8640
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8637
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 195
Effective length of database: 69,691,104
Effective search space: 13589765280
Effective search space used: 13589765280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top