ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf37i04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DQ245692.1| Zea mays clone 19358 mRNA sequence 252 2e-63
2ref|NM_001066771.1| Oryza sativa (japonica cultivar-group) Os07g... 208 3e-50
3dbj|AK111068.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 3e-50
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 188 2e-44
5dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic D... 188 2e-44
6dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic D... 188 2e-44
7ref|NM_001056885.1| Oryza sativa (japonica cultivar-group) Os03g... 143 1e-30
8gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome... 105 3e-19
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 105 3e-19
10gb|AY111634.1| Zea mays CL11221_1 mRNA sequence 86 3e-13
11gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, com... 50 0.014
12gb|CP000454.1| Arthrobacter sp. FB24, complete genome 46 0.22
13ref|XM_659639.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.88
14gb|DQ093593.1| HIV-1 isolate 03ZASK072B1 from South Africa, comp... 44 0.88
15emb|BX000530.10| Mouse DNA sequence from clone RP24-500B8 on chr... 44 0.88
16gb|CP000479.1| Mycobacterium avium 104, complete genome 42 3.5
17gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 3.5
18emb|CR762404.6| Zebrafish DNA sequence from clone DKEY-204H11 in... 42 3.5
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.5
20emb|AL355136.19| Human DNA sequence from clone RP11-435P18 on ch... 42 3.5
21emb|CR376754.6| Zebrafish DNA sequence from clone CH211-254O14 i... 42 3.5
22ref|XM_955530.1| Neurospora crassa OR74A hypothetical protein (N... 42 3.5
23emb|BX294185.5| Zebrafish DNA sequence from clone CH211-232L14 i... 42 3.5
24emb|BX548167.10| Zebrafish DNA sequence from clone DKEY-46L15 in... 42 3.5
25gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 3.5
26emb|AL954352.10| Mouse DNA sequence from clone RP23-159J7 on chr... 42 3.5
27emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575... 42 3.5
28gb|L26955.1|STMBLEANKB Streptomyces verticillus beta-hydroxylase... 42 3.5

>gb|DQ245692.1| Zea mays clone 19358 mRNA sequence
          Length = 897
 Score =  252 bits (127), Expect = 2e-63
 Identities = 310/371 (83%)
 Strand = Plus / Plus

                                                                       
Query: 195 gaggtggcgctgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctc 254
           |||| ||||||| ||||||||||  |||||||||  ||||||||||  |||||||| |||
Sbjct: 143 gaggcggcgctgttcgggaagggtaggtacaaggtgtgggccctcgcggccatcgcgctc 202

                                                                       
Query: 255 ctcgcgctctggtccatgttcgccgcctccgtcaccctccactggtcctccggcgacctt 314
           || |||||||||||||||||||||||||||||||| || | || |||||||| ||| || 
Sbjct: 203 ctagcgctctggtccatgttcgccgcctccgtcacgctgcgcttgtcctccgtcgatctc 262

                                                                       
Query: 315 gccgccgcctcccgggacatgagtggtcccctcctcgacgacctcgacccgctcgagatg 374
           ||| || | | | |||||  ||| | ||| ||| ||||||| || || || |  ||||||
Sbjct: 263 gccaccacgttcggggacgcgagcgatccgctcatcgacgaacttgatccccgggagatg 322

                                                                       
Query: 375 gaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggtgatcat 434
           ||| |||| || ||  |||||||||||||||||||  ||||||| ||||| | | |||||
Sbjct: 323 gagcaaagagaaaagctagtgcgccggatgtgggatgtgtacacacgcacagataatcat 382

                                                                       
Query: 435 gtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggagcttgctggt 494
           ||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtacggctaccacggttctggcaagaagcatttgaggctgcatatgaggagcttgctggt 442

                                                                       
Query: 495 gatgatacgcctgcaagtgacgcagcagtatcggaaattgctcgcatggcaattcacagg 554
           |||||||||| | | | ||| |||||  |||| || |||||||||||| |||| || |||
Sbjct: 443 gatgatacgcttactactgatgcagctatatctgagattgctcgcatgtcaatccatagg 502

                      
Query: 555 cctgagcttga 565
           |||||| ||||
Sbjct: 503 cctgaggttga 513



to top

>ref|NM_001066771.1| Oryza sativa (japonica cultivar-group) Os07g0607500 (Os07g0607500)
           mRNA, complete cds
          Length = 704

 Score =  208 bits (105), Expect = 3e-50
 Identities = 194/223 (86%), Gaps = 3/223 (1%)
 Strand = Plus / Plus

                                                                       
Query: 349 tcgacgacctcgacccgctcgagatggaggaaagggagaaattagtgcgccggatgtggg 408
           |||||||||||||||| |||||||||||||| || |||||  ||||||||||||||||||
Sbjct: 303 tcgacgacctcgaccccctcgagatggaggacagagagaagctagtgcgccggatgtggg 362

                                                                       
Query: 409 acttgtacacgcgcactggtgatcat---gtatggcttccgcggttctggcaagaagcat 465
           |  ||||||| ||||| |||| | ||   ||| ||||||| |||||||||||||||||||
Sbjct: 363 atgtgtacacacgcaccggtgttgatcgggtacggcttccacggttctggcaagaagcat 422

                                                                       
Query: 466 ttgaggctgcatatgaggagcttgctggtgatgatacgcctgcaagtgacgcagcagtat 525
           | |||||||||||||||||||||||||||||||||||||  || |||||  | |||||||
Sbjct: 423 tcgaggctgcatatgaggagcttgctggtgatgatacgcaggctagtgagacggcagtat 482

                                                      
Query: 526 cggaaattgctcgcatggcaattcacaggcctgagcttgaaca 568
           | || |||||||||||| || | ||||||||||| ||||||||
Sbjct: 483 ctgagattgctcgcatgtcagtccacaggcctgaacttgaaca 525



 Score =  188 bits (95), Expect = 2e-44
 Identities = 157/177 (88%), Gaps = 3/177 (1%)
 Strand = Plus / Plus

                                                                       
Query: 148 cgccggcgactaagatctccattcctgtctc---cgtcggcgggggcgcggaggtggcgc 204
           |||||||||| ||||||||||| ||  ||||   || || ||| || ||||||| |||||
Sbjct: 99  cgccggcgaccaagatctccatccccatctcggccgccgccggcggggcggaggcggcgc 158

                                                                       
Query: 205 tgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctct 264
           ||||||||||||| ||||||||||| ||||| |||| ||||||||| |||||||||||||
Sbjct: 159 tgctcgggaaggggcggtacaaggcgtgggcgctcgccgccatcgcgctcctcgcgctct 218

                                                                    
Query: 265 ggtccatgttcgccgcctccgtcaccctccactggtcctccggcgaccttgccgccg 321
           |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct: 219 ggtccatgttcgccgcctccgtcaccatccgctggtcctccggcgacctcgccgccg 275



to top

>dbj|AK111068.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-E03, full
           insert sequence
          Length = 707

 Score =  208 bits (105), Expect = 3e-50
 Identities = 194/223 (86%), Gaps = 3/223 (1%)
 Strand = Plus / Plus

                                                                       
Query: 349 tcgacgacctcgacccgctcgagatggaggaaagggagaaattagtgcgccggatgtggg 408
           |||||||||||||||| |||||||||||||| || |||||  ||||||||||||||||||
Sbjct: 306 tcgacgacctcgaccccctcgagatggaggacagagagaagctagtgcgccggatgtggg 365

                                                                       
Query: 409 acttgtacacgcgcactggtgatcat---gtatggcttccgcggttctggcaagaagcat 465
           |  ||||||| ||||| |||| | ||   ||| ||||||| |||||||||||||||||||
Sbjct: 366 atgtgtacacacgcaccggtgttgatcgggtacggcttccacggttctggcaagaagcat 425

                                                                       
Query: 466 ttgaggctgcatatgaggagcttgctggtgatgatacgcctgcaagtgacgcagcagtat 525
           | |||||||||||||||||||||||||||||||||||||  || |||||  | |||||||
Sbjct: 426 tcgaggctgcatatgaggagcttgctggtgatgatacgcaggctagtgagacggcagtat 485

                                                      
Query: 526 cggaaattgctcgcatggcaattcacaggcctgagcttgaaca 568
           | || |||||||||||| || | ||||||||||| ||||||||
Sbjct: 486 ctgagattgctcgcatgtcagtccacaggcctgaacttgaaca 528



 Score =  188 bits (95), Expect = 2e-44
 Identities = 157/177 (88%), Gaps = 3/177 (1%)
 Strand = Plus / Plus

                                                                       
Query: 148 cgccggcgactaagatctccattcctgtctc---cgtcggcgggggcgcggaggtggcgc 204
           |||||||||| ||||||||||| ||  ||||   || || ||| || ||||||| |||||
Sbjct: 102 cgccggcgaccaagatctccatccccatctcggccgccgccggcggggcggaggcggcgc 161

                                                                       
Query: 205 tgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctct 264
           ||||||||||||| ||||||||||| ||||| |||| ||||||||| |||||||||||||
Sbjct: 162 tgctcgggaaggggcggtacaaggcgtgggcgctcgccgccatcgcgctcctcgcgctct 221

                                                                    
Query: 265 ggtccatgttcgccgcctccgtcaccctccactggtcctccggcgaccttgccgccg 321
           |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct: 222 ggtccatgttcgccgcctccgtcaccatccgctggtcctccggcgacctcgccgccg 278



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  188 bits (95), Expect = 2e-44
 Identities = 157/177 (88%), Gaps = 3/177 (1%)
 Strand = Plus / Minus

                                                                            
Query: 148      cgccggcgactaagatctccattcctgtctc---cgtcggcgggggcgcggaggtggcgc 204
                |||||||||| ||||||||||| ||  ||||   || || ||| || ||||||| |||||
Sbjct: 24914621 cgccggcgaccaagatctccatccccatctcggccgccgccggcggggcggaggcggcgc 24914562

                                                                            
Query: 205      tgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctct 264
                ||||||||||||| ||||||||||| ||||| |||| ||||||||| |||||||||||||
Sbjct: 24914561 tgctcgggaaggggcggtacaaggcgtgggcgctcgccgccatcgcgctcctcgcgctct 24914502

                                                                         
Query: 265      ggtccatgttcgccgcctccgtcaccctccactggtcctccggcgaccttgccgccg 321
                |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct: 24914501 ggtccatgttcgccgcctccgtcaccatccgctggtcctccggcgacctcgccgccg 24914445



 Score =  176 bits (89), Expect = 9e-41
 Identities = 175/203 (86%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                            
Query: 369      gagatggaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggt 428
                ||||||||||| || |||||  |||||||||||||||||||  ||||||| ||||| |||
Sbjct: 24913718 gagatggaggacagagagaagctagtgcgccggatgtgggatgtgtacacacgcaccggt 24913659

                                                                            
Query: 429      gatcat---gtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggag 485
                | | ||   ||| ||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 24913658 gttgatcgggtacggcttccacggttctggcaagaagcattcgaggctgcatatgaggag 24913599

                                                                            
Query: 486      cttgctggtgatgatacgcctgcaagtgacgcagcagtatcggaaattgctcgcatggca 545
                |||||||||||||||||||  || |||||  | |||||||| || |||||||||||| ||
Sbjct: 24913598 cttgctggtgatgatacgcaggctagtgagacggcagtatctgagattgctcgcatgtca 24913539

                                       
Query: 546      attcacaggcctgagcttgaaca 568
                 | ||||||||||| ||||||||
Sbjct: 24913538 gtccacaggcctgaacttgaaca 24913516



to top

>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0072I06
          Length = 162411

 Score =  188 bits (95), Expect = 2e-44
 Identities = 157/177 (88%), Gaps = 3/177 (1%)
 Strand = Plus / Minus

                                                                         
Query: 148   cgccggcgactaagatctccattcctgtctc---cgtcggcgggggcgcggaggtggcgc 204
             |||||||||| ||||||||||| ||  ||||   || || ||| || ||||||| |||||
Sbjct: 98253 cgccggcgaccaagatctccatccccatctcggccgccgccggcggggcggaggcggcgc 98194

                                                                         
Query: 205   tgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctct 264
             ||||||||||||| ||||||||||| ||||| |||| ||||||||| |||||||||||||
Sbjct: 98193 tgctcgggaaggggcggtacaaggcgtgggcgctcgccgccatcgcgctcctcgcgctct 98134

                                                                      
Query: 265   ggtccatgttcgccgcctccgtcaccctccactggtcctccggcgaccttgccgccg 321
             |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct: 98133 ggtccatgttcgccgcctccgtcaccatccgctggtcctccggcgacctcgccgccg 98077



 Score =  176 bits (89), Expect = 9e-41
 Identities = 175/203 (86%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                         
Query: 369   gagatggaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggt 428
             ||||||||||| || |||||  |||||||||||||||||||  ||||||| ||||| |||
Sbjct: 97350 gagatggaggacagagagaagctagtgcgccggatgtgggatgtgtacacacgcaccggt 97291

                                                                         
Query: 429   gatcat---gtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggag 485
             | | ||   ||| ||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 97290 gttgatcgggtacggcttccacggttctggcaagaagcattcgaggctgcatatgaggag 97231

                                                                         
Query: 486   cttgctggtgatgatacgcctgcaagtgacgcagcagtatcggaaattgctcgcatggca 545
             |||||||||||||||||||  || |||||  | |||||||| || |||||||||||| ||
Sbjct: 97230 cttgctggtgatgatacgcaggctagtgagacggcagtatctgagattgctcgcatgtca 97171

                                    
Query: 546   attcacaggcctgagcttgaaca 568
              | ||||||||||| ||||||||
Sbjct: 97170 gtccacaggcctgaacttgaaca 97148



to top

>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0493C06
          Length = 158923

 Score =  188 bits (95), Expect = 2e-44
 Identities = 157/177 (88%), Gaps = 3/177 (1%)
 Strand = Plus / Minus

                                                                          
Query: 148    cgccggcgactaagatctccattcctgtctc---cgtcggcgggggcgcggaggtggcgc 204
              |||||||||| ||||||||||| ||  ||||   || || ||| || ||||||| |||||
Sbjct: 149072 cgccggcgaccaagatctccatccccatctcggccgccgccggcggggcggaggcggcgc 149013

                                                                          
Query: 205    tgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctct 264
              ||||||||||||| ||||||||||| ||||| |||| ||||||||| |||||||||||||
Sbjct: 149012 tgctcgggaaggggcggtacaaggcgtgggcgctcgccgccatcgcgctcctcgcgctct 148953

                                                                       
Query: 265    ggtccatgttcgccgcctccgtcaccctccactggtcctccggcgaccttgccgccg 321
              |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct: 148952 ggtccatgttcgccgcctccgtcaccatccgctggtcctccggcgacctcgccgccg 148896



 Score =  176 bits (89), Expect = 9e-41
 Identities = 175/203 (86%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                          
Query: 369    gagatggaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggt 428
              ||||||||||| || |||||  |||||||||||||||||||  ||||||| ||||| |||
Sbjct: 148169 gagatggaggacagagagaagctagtgcgccggatgtgggatgtgtacacacgcaccggt 148110

                                                                          
Query: 429    gatcat---gtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggag 485
              | | ||   ||| ||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 148109 gttgatcgggtacggcttccacggttctggcaagaagcattcgaggctgcatatgaggag 148050

                                                                          
Query: 486    cttgctggtgatgatacgcctgcaagtgacgcagcagtatcggaaattgctcgcatggca 545
              |||||||||||||||||||  || |||||  | |||||||| || |||||||||||| ||
Sbjct: 148049 cttgctggtgatgatacgcaggctagtgagacggcagtatctgagattgctcgcatgtca 147990

                                     
Query: 546    attcacaggcctgagcttgaaca 568
               | ||||||||||| ||||||||
Sbjct: 147989 gtccacaggcctgaacttgaaca 147967



to top

>ref|NM_001056885.1| Oryza sativa (japonica cultivar-group) Os03g0411600 (Os03g0411600)
           mRNA, complete cds
          Length = 537

 Score =  143 bits (72), Expect = 1e-30
 Identities = 138/160 (86%)
 Strand = Plus / Plus

                                                                       
Query: 342 cccctcctcgacgacctcgacccgctcgagatggaggaaagggagaaattagtgcgccgg 401
           ||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||| | || 
Sbjct: 247 cccctcctcgacgacctcgactcgctcgaaatggaggagagggaaaaattagtgggtcga 306

                                                                       
Query: 402 atgtgggacttgtacacgcgcactggtgatcatgtatggcttccgcggttctggcaagaa 461
           ||||||||| ||||||| ||||| |||||| | ||  | ||||| || |||||||| |||
Sbjct: 307 atgtgggacatgtacacacgcaccggtgatgaggtccgacttccacgattctggcaggaa 366

                                                   
Query: 462 gcatttgaggctgcatatgaggagcttgctggtgatgata 501
           || ||||||||||| || || |||||||||||||||||||
Sbjct: 367 gcctttgaggctgcctacgaagagcttgctggtgatgata 406



 Score =  105 bits (53), Expect = 3e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                       
Query: 208 tcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctctggt 267
           |||||||||| ||||||||||  |||||| | |  |||||||| ||||||||||||||||
Sbjct: 104 tcgggaaggggcggtacaaggtgtgggccttggcggccatcgcgctcctcgcgctctggt 163

                                                    
Query: 268 ccatgttcgccgcctccgtcaccctccactggtcctccggc 308
           |||||| ||||||||||| | |||||| |||||||||||||
Sbjct: 164 ccatgtccgccgcctccgcctccctccgctggtcctccggc 204



to top

>gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C05
             map C12819S, complete sequence
          Length = 113266

 Score =  105 bits (53), Expect = 3e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                         
Query: 208   tcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctctggt 267
             |||||||||| ||||||||||  |||||| | |  |||||||| ||||||||||||||||
Sbjct: 49409 tcgggaaggggcggtacaaggtgtgggccttggcggccatcgcgctcctcgcgctctggt 49468

                                                      
Query: 268   ccatgttcgccgcctccgtcaccctccactggtcctccggc 308
             |||||| ||||||||||| | |||||| |||||||||||||
Sbjct: 49469 ccatgtccgccgcctccgcctccctccgctggtcctccggc 49509



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                         
Query: 372   atggaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggtgat 431
             |||||||| ||||| ||||||||| | || ||||||||| ||||||| ||||| ||||||
Sbjct: 50946 atggaggagagggaaaaattagtgggtcgaatgtgggacatgtacacacgcaccggtgat 51005

                                                                         
Query: 432   catgtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggagcttgct 491
              | ||  | ||||| || |||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 51006 gaggtccgacttccacgattctggcaggaagcctttgaggctgcctacgaagagcttgct 51065

                       
Query: 492   ggtgatgata 501
             ||||||||||
Sbjct: 51066 ggtgatgata 51075



 Score = 48.1 bits (24), Expect = 0.056
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 342   cccctcctcgacgacctcgacccgctcg 369
             ||||||||||||||||||||| ||||||
Sbjct: 49552 cccctcctcgacgacctcgactcgctcg 49579



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  105 bits (53), Expect = 3e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                            
Query: 208      tcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctctggt 267
                |||||||||| ||||||||||  |||||| | |  |||||||| ||||||||||||||||
Sbjct: 16805192 tcgggaaggggcggtacaaggtgtgggccttggcggccatcgcgctcctcgcgctctggt 16805251

                                                         
Query: 268      ccatgttcgccgcctccgtcaccctccactggtcctccggc 308
                |||||| ||||||||||| | |||||| |||||||||||||
Sbjct: 16805252 ccatgtccgccgcctccgcctccctccgctggtcctccggc 16805292



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                            
Query: 372      atggaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggtgat 431
                |||||||| ||||| ||||||||| | || ||||||||| ||||||| ||||| ||||||
Sbjct: 16806729 atggaggagagggaaaaattagtgggtcgaatgtgggacatgtacacacgcaccggtgat 16806788

                                                                            
Query: 432      catgtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggagcttgct 491
                 | ||  | ||||| || |||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 16806789 gaggtccgacttccacgattctggcaggaagcctttgaggctgcctacgaagagcttgct 16806848

                          
Query: 492      ggtgatgata 501
                ||||||||||
Sbjct: 16806849 ggtgatgata 16806858



 Score = 48.1 bits (24), Expect = 0.056
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 342      cccctcctcgacgacctcgacccgctcg 369
                ||||||||||||||||||||| ||||||
Sbjct: 16805335 cccctcctcgacgacctcgactcgctcg 16805362



to top

>gb|AY111634.1| Zea mays CL11221_1 mRNA sequence
          Length = 673

 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                       
Query: 402 atgtgggacttgtacacgcgcactggtgatcatgtatggcttccgcggttctggcaagaa 461
           ||||||||| ||||||| || ||  ||||| | ||| ||||||| ||||||||||| || 
Sbjct: 599 atgtgggacatgtacacacggaccagtgatgaggtacggcttccacggttctggcaggag 540

                                                  
Query: 462 gcatttgaggctgcatatgaggagcttgctggtgatgat 500
           || |||||||||||||| ||||| |||||||||||||||
Sbjct: 539 gcgtttgaggctgcatacgaggaacttgctggtgatgat 501



to top

>gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, complete sequence
          Length = 105308

 Score = 50.1 bits (25), Expect = 0.014
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 453   tggcaagaagcatttgaggctgcatatgaggag 485
             ||||| ||||||||||||||||| |||||||||
Sbjct: 15303 tggcaggaagcatttgaggctgcctatgaggag 15335



to top

>gb|CP000454.1| Arthrobacter sp. FB24, complete genome
          Length = 4698945

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 105    gtcaccggccaccagtaccacggcgtc 131
              ||||||||||||||| |||||||||||
Sbjct: 352359 gtcaccggccaccagcaccacggcgtc 352333



to top

>ref|XM_659639.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7127.2), mRNA
          Length = 1470

 Score = 44.1 bits (22), Expect = 0.88
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 281  ctccgtcaccctccactggtcctccg 306
            ||||||||||||| ||||||||||||
Sbjct: 1149 ctccgtcaccctcgactggtcctccg 1174



to top

>gb|DQ093593.1| HIV-1 isolate 03ZASK072B1 from South Africa, complete genome
          Length = 9123

 Score = 44.1 bits (22), Expect = 0.88
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 368  cgagatggaggaaagggagaaa 389
            ||||||||||||||||||||||
Sbjct: 7048 cgagatggaggaaagggagaaa 7069



to top

>emb|BX000530.10| Mouse DNA sequence from clone RP24-500B8 on chromosome 2, complete
             sequence
          Length = 45884

 Score = 44.1 bits (22), Expect = 0.88
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 724   agcttcatgaagcaggctggtc 745
             ||||||||||||||||||||||
Sbjct: 25763 agcttcatgaagcaggctggtc 25742



to top

>gb|CP000479.1| Mycobacterium avium 104, complete genome
          Length = 5475491

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 346     tcctcgacgacctcgacccgc 366
               |||||||||||||||||||||
Sbjct: 4017317 tcctcgacgacctcgacccgc 4017337



to top

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 306     ggcgaccttgccgccgcctcc 326
               |||||||||||||||||||||
Sbjct: 3711572 ggcgaccttgccgccgcctcc 3711552



to top

>emb|CR762404.6| Zebrafish DNA sequence from clone DKEY-204H11 in linkage group 4,
             complete sequence
          Length = 180159

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 682   tgcaaaaaagctaacctttat 702
             |||||||||||||||||||||
Sbjct: 30327 tgcaaaaaagctaacctttat 30307



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 247     tcgccctcctcgcgctctggt 267
               |||||||||||||||||||||
Sbjct: 1659985 tcgccctcctcgcgctctggt 1659965



to top

>emb|AL355136.19| Human DNA sequence from clone RP11-435P18 on chromosome 13, complete
             sequence
          Length = 200059

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 697   ctttatgctgtatcgaagtta 717
             |||||||||||||||||||||
Sbjct: 93246 ctttatgctgtatcgaagtta 93266



to top

>emb|CR376754.6| Zebrafish DNA sequence from clone CH211-254O14 in linkage group 2,
             complete sequence
          Length = 84275

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 575   taattataattagaaacagta 595
             |||||||||||||||||||||
Sbjct: 43982 taattataattagaaacagta 43962



to top

>ref|XM_955530.1| Neurospora crassa OR74A hypothetical protein (NCU01394.1) partial
           mRNA
          Length = 3801

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 234 gccctcgtcgccatcgccctcctcg 258
           |||||||||||||||| ||||||||
Sbjct: 40  gccctcgtcgccatcgtcctcctcg 64



to top

>emb|BX294185.5| Zebrafish DNA sequence from clone CH211-232L14 in linkage group 24,
             complete sequence
          Length = 115427

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 682   tgcaaaaaagctaacctttat 702
             |||||||||||||||||||||
Sbjct: 20210 tgcaaaaaagctaacctttat 20230



to top

>emb|BX548167.10| Zebrafish DNA sequence from clone DKEY-46L15 in linkage group 20,
             complete sequence
          Length = 135292

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 682   tgcaaaaaagctaacctttat 702
             |||||||||||||||||||||
Sbjct: 34818 tgcaaaaaagctaacctttat 34798



to top

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 346     tcctcgacgacctcgacccgc 366
               |||||||||||||||||||||
Sbjct: 3417463 tcctcgacgacctcgacccgc 3417483



to top

>emb|AL954352.10| Mouse DNA sequence from clone RP23-159J7 on chromosome 4, complete
              sequence
          Length = 178280

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 722    gcagcttcatgaagcaggctg 742
              |||||||||||||||||||||
Sbjct: 100704 gcagcttcatgaagcaggctg 100684



to top

>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 91883

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 247   tcgccctcctcgcgctctggt 267
             |||||||||||||||||||||
Sbjct: 32939 tcgccctcctcgcgctctggt 32959



to top

>gb|L26955.1|STMBLEANKB Streptomyces verticillus beta-hydroxylase, bleomycin/phleomycin
           binding protein, ankyrin homologue, bleomycin and
           transport protein gene, complete cds
          Length = 7183

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 cgctgctcgggaagggccggt 222
           |||||||||||||||||||||
Sbjct: 474 cgctgctcgggaagggccggt 494


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 151,432,416
Number of extensions: 8075385
Number of successful extensions: 162567
Number of sequences better than 10.0: 28
Number of HSP's gapped: 162562
Number of HSP's successfully gapped: 39
Length of query: 924
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 901
Effective length of database: 18,503,978,556
Effective search space: 16672084678956
Effective search space used: 16672084678956
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top