| Clone Name | FLbaf37i04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ245692.1| Zea mays clone 19358 mRNA sequence Length = 897 Score = 252 bits (127), Expect = 2e-63 Identities = 310/371 (83%) Strand = Plus / Plus Query: 195 gaggtggcgctgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctc 254 |||| ||||||| |||||||||| ||||||||| |||||||||| |||||||| ||| Sbjct: 143 gaggcggcgctgttcgggaagggtaggtacaaggtgtgggccctcgcggccatcgcgctc 202 Query: 255 ctcgcgctctggtccatgttcgccgcctccgtcaccctccactggtcctccggcgacctt 314 || |||||||||||||||||||||||||||||||| || | || |||||||| ||| || Sbjct: 203 ctagcgctctggtccatgttcgccgcctccgtcacgctgcgcttgtcctccgtcgatctc 262 Query: 315 gccgccgcctcccgggacatgagtggtcccctcctcgacgacctcgacccgctcgagatg 374 ||| || | | | ||||| ||| | ||| ||| ||||||| || || || | |||||| Sbjct: 263 gccaccacgttcggggacgcgagcgatccgctcatcgacgaacttgatccccgggagatg 322 Query: 375 gaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggtgatcat 434 ||| |||| || || ||||||||||||||||||| ||||||| ||||| | | ||||| Sbjct: 323 gagcaaagagaaaagctagtgcgccggatgtgggatgtgtacacacgcacagataatcat 382 Query: 435 gtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggagcttgctggt 494 ||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 gtacggctaccacggttctggcaagaagcatttgaggctgcatatgaggagcttgctggt 442 Query: 495 gatgatacgcctgcaagtgacgcagcagtatcggaaattgctcgcatggcaattcacagg 554 |||||||||| | | | ||| ||||| |||| || |||||||||||| |||| || ||| Sbjct: 443 gatgatacgcttactactgatgcagctatatctgagattgctcgcatgtcaatccatagg 502 Query: 555 cctgagcttga 565 |||||| |||| Sbjct: 503 cctgaggttga 513
>ref|NM_001066771.1| Oryza sativa (japonica cultivar-group) Os07g0607500 (Os07g0607500) mRNA, complete cds Length = 704 Score = 208 bits (105), Expect = 3e-50 Identities = 194/223 (86%), Gaps = 3/223 (1%) Strand = Plus / Plus Query: 349 tcgacgacctcgacccgctcgagatggaggaaagggagaaattagtgcgccggatgtggg 408 |||||||||||||||| |||||||||||||| || ||||| |||||||||||||||||| Sbjct: 303 tcgacgacctcgaccccctcgagatggaggacagagagaagctagtgcgccggatgtggg 362 Query: 409 acttgtacacgcgcactggtgatcat---gtatggcttccgcggttctggcaagaagcat 465 | ||||||| ||||| |||| | || ||| ||||||| ||||||||||||||||||| Sbjct: 363 atgtgtacacacgcaccggtgttgatcgggtacggcttccacggttctggcaagaagcat 422 Query: 466 ttgaggctgcatatgaggagcttgctggtgatgatacgcctgcaagtgacgcagcagtat 525 | ||||||||||||||||||||||||||||||||||||| || ||||| | ||||||| Sbjct: 423 tcgaggctgcatatgaggagcttgctggtgatgatacgcaggctagtgagacggcagtat 482 Query: 526 cggaaattgctcgcatggcaattcacaggcctgagcttgaaca 568 | || |||||||||||| || | ||||||||||| |||||||| Sbjct: 483 ctgagattgctcgcatgtcagtccacaggcctgaacttgaaca 525 Score = 188 bits (95), Expect = 2e-44 Identities = 157/177 (88%), Gaps = 3/177 (1%) Strand = Plus / Plus Query: 148 cgccggcgactaagatctccattcctgtctc---cgtcggcgggggcgcggaggtggcgc 204 |||||||||| ||||||||||| || |||| || || ||| || ||||||| ||||| Sbjct: 99 cgccggcgaccaagatctccatccccatctcggccgccgccggcggggcggaggcggcgc 158 Query: 205 tgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctct 264 ||||||||||||| ||||||||||| ||||| |||| ||||||||| ||||||||||||| Sbjct: 159 tgctcgggaaggggcggtacaaggcgtgggcgctcgccgccatcgcgctcctcgcgctct 218 Query: 265 ggtccatgttcgccgcctccgtcaccctccactggtcctccggcgaccttgccgccg 321 |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 219 ggtccatgttcgccgcctccgtcaccatccgctggtcctccggcgacctcgccgccg 275
>dbj|AK111068.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-E03, full insert sequence Length = 707 Score = 208 bits (105), Expect = 3e-50 Identities = 194/223 (86%), Gaps = 3/223 (1%) Strand = Plus / Plus Query: 349 tcgacgacctcgacccgctcgagatggaggaaagggagaaattagtgcgccggatgtggg 408 |||||||||||||||| |||||||||||||| || ||||| |||||||||||||||||| Sbjct: 306 tcgacgacctcgaccccctcgagatggaggacagagagaagctagtgcgccggatgtggg 365 Query: 409 acttgtacacgcgcactggtgatcat---gtatggcttccgcggttctggcaagaagcat 465 | ||||||| ||||| |||| | || ||| ||||||| ||||||||||||||||||| Sbjct: 366 atgtgtacacacgcaccggtgttgatcgggtacggcttccacggttctggcaagaagcat 425 Query: 466 ttgaggctgcatatgaggagcttgctggtgatgatacgcctgcaagtgacgcagcagtat 525 | ||||||||||||||||||||||||||||||||||||| || ||||| | ||||||| Sbjct: 426 tcgaggctgcatatgaggagcttgctggtgatgatacgcaggctagtgagacggcagtat 485 Query: 526 cggaaattgctcgcatggcaattcacaggcctgagcttgaaca 568 | || |||||||||||| || | ||||||||||| |||||||| Sbjct: 486 ctgagattgctcgcatgtcagtccacaggcctgaacttgaaca 528 Score = 188 bits (95), Expect = 2e-44 Identities = 157/177 (88%), Gaps = 3/177 (1%) Strand = Plus / Plus Query: 148 cgccggcgactaagatctccattcctgtctc---cgtcggcgggggcgcggaggtggcgc 204 |||||||||| ||||||||||| || |||| || || ||| || ||||||| ||||| Sbjct: 102 cgccggcgaccaagatctccatccccatctcggccgccgccggcggggcggaggcggcgc 161 Query: 205 tgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctct 264 ||||||||||||| ||||||||||| ||||| |||| ||||||||| ||||||||||||| Sbjct: 162 tgctcgggaaggggcggtacaaggcgtgggcgctcgccgccatcgcgctcctcgcgctct 221 Query: 265 ggtccatgttcgccgcctccgtcaccctccactggtcctccggcgaccttgccgccg 321 |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 222 ggtccatgttcgccgcctccgtcaccatccgctggtcctccggcgacctcgccgccg 278
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 188 bits (95), Expect = 2e-44 Identities = 157/177 (88%), Gaps = 3/177 (1%) Strand = Plus / Minus Query: 148 cgccggcgactaagatctccattcctgtctc---cgtcggcgggggcgcggaggtggcgc 204 |||||||||| ||||||||||| || |||| || || ||| || ||||||| ||||| Sbjct: 24914621 cgccggcgaccaagatctccatccccatctcggccgccgccggcggggcggaggcggcgc 24914562 Query: 205 tgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctct 264 ||||||||||||| ||||||||||| ||||| |||| ||||||||| ||||||||||||| Sbjct: 24914561 tgctcgggaaggggcggtacaaggcgtgggcgctcgccgccatcgcgctcctcgcgctct 24914502 Query: 265 ggtccatgttcgccgcctccgtcaccctccactggtcctccggcgaccttgccgccg 321 |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 24914501 ggtccatgttcgccgcctccgtcaccatccgctggtcctccggcgacctcgccgccg 24914445 Score = 176 bits (89), Expect = 9e-41 Identities = 175/203 (86%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 369 gagatggaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggt 428 ||||||||||| || ||||| ||||||||||||||||||| ||||||| ||||| ||| Sbjct: 24913718 gagatggaggacagagagaagctagtgcgccggatgtgggatgtgtacacacgcaccggt 24913659 Query: 429 gatcat---gtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggag 485 | | || ||| ||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 24913658 gttgatcgggtacggcttccacggttctggcaagaagcattcgaggctgcatatgaggag 24913599 Query: 486 cttgctggtgatgatacgcctgcaagtgacgcagcagtatcggaaattgctcgcatggca 545 ||||||||||||||||||| || ||||| | |||||||| || |||||||||||| || Sbjct: 24913598 cttgctggtgatgatacgcaggctagtgagacggcagtatctgagattgctcgcatgtca 24913539 Query: 546 attcacaggcctgagcttgaaca 568 | ||||||||||| |||||||| Sbjct: 24913538 gtccacaggcctgaacttgaaca 24913516
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 188 bits (95), Expect = 2e-44 Identities = 157/177 (88%), Gaps = 3/177 (1%) Strand = Plus / Minus Query: 148 cgccggcgactaagatctccattcctgtctc---cgtcggcgggggcgcggaggtggcgc 204 |||||||||| ||||||||||| || |||| || || ||| || ||||||| ||||| Sbjct: 98253 cgccggcgaccaagatctccatccccatctcggccgccgccggcggggcggaggcggcgc 98194 Query: 205 tgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctct 264 ||||||||||||| ||||||||||| ||||| |||| ||||||||| ||||||||||||| Sbjct: 98193 tgctcgggaaggggcggtacaaggcgtgggcgctcgccgccatcgcgctcctcgcgctct 98134 Query: 265 ggtccatgttcgccgcctccgtcaccctccactggtcctccggcgaccttgccgccg 321 |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 98133 ggtccatgttcgccgcctccgtcaccatccgctggtcctccggcgacctcgccgccg 98077 Score = 176 bits (89), Expect = 9e-41 Identities = 175/203 (86%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 369 gagatggaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggt 428 ||||||||||| || ||||| ||||||||||||||||||| ||||||| ||||| ||| Sbjct: 97350 gagatggaggacagagagaagctagtgcgccggatgtgggatgtgtacacacgcaccggt 97291 Query: 429 gatcat---gtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggag 485 | | || ||| ||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 97290 gttgatcgggtacggcttccacggttctggcaagaagcattcgaggctgcatatgaggag 97231 Query: 486 cttgctggtgatgatacgcctgcaagtgacgcagcagtatcggaaattgctcgcatggca 545 ||||||||||||||||||| || ||||| | |||||||| || |||||||||||| || Sbjct: 97230 cttgctggtgatgatacgcaggctagtgagacggcagtatctgagattgctcgcatgtca 97171 Query: 546 attcacaggcctgagcttgaaca 568 | ||||||||||| |||||||| Sbjct: 97170 gtccacaggcctgaacttgaaca 97148
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 188 bits (95), Expect = 2e-44 Identities = 157/177 (88%), Gaps = 3/177 (1%) Strand = Plus / Minus Query: 148 cgccggcgactaagatctccattcctgtctc---cgtcggcgggggcgcggaggtggcgc 204 |||||||||| ||||||||||| || |||| || || ||| || ||||||| ||||| Sbjct: 149072 cgccggcgaccaagatctccatccccatctcggccgccgccggcggggcggaggcggcgc 149013 Query: 205 tgctcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctct 264 ||||||||||||| ||||||||||| ||||| |||| ||||||||| ||||||||||||| Sbjct: 149012 tgctcgggaaggggcggtacaaggcgtgggcgctcgccgccatcgcgctcctcgcgctct 148953 Query: 265 ggtccatgttcgccgcctccgtcaccctccactggtcctccggcgaccttgccgccg 321 |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 148952 ggtccatgttcgccgcctccgtcaccatccgctggtcctccggcgacctcgccgccg 148896 Score = 176 bits (89), Expect = 9e-41 Identities = 175/203 (86%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 369 gagatggaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggt 428 ||||||||||| || ||||| ||||||||||||||||||| ||||||| ||||| ||| Sbjct: 148169 gagatggaggacagagagaagctagtgcgccggatgtgggatgtgtacacacgcaccggt 148110 Query: 429 gatcat---gtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggag 485 | | || ||| ||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 148109 gttgatcgggtacggcttccacggttctggcaagaagcattcgaggctgcatatgaggag 148050 Query: 486 cttgctggtgatgatacgcctgcaagtgacgcagcagtatcggaaattgctcgcatggca 545 ||||||||||||||||||| || ||||| | |||||||| || |||||||||||| || Sbjct: 148049 cttgctggtgatgatacgcaggctagtgagacggcagtatctgagattgctcgcatgtca 147990 Query: 546 attcacaggcctgagcttgaaca 568 | ||||||||||| |||||||| Sbjct: 147989 gtccacaggcctgaacttgaaca 147967
>ref|NM_001056885.1| Oryza sativa (japonica cultivar-group) Os03g0411600 (Os03g0411600) mRNA, complete cds Length = 537 Score = 143 bits (72), Expect = 1e-30 Identities = 138/160 (86%) Strand = Plus / Plus Query: 342 cccctcctcgacgacctcgacccgctcgagatggaggaaagggagaaattagtgcgccgg 401 ||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||| | || Sbjct: 247 cccctcctcgacgacctcgactcgctcgaaatggaggagagggaaaaattagtgggtcga 306 Query: 402 atgtgggacttgtacacgcgcactggtgatcatgtatggcttccgcggttctggcaagaa 461 ||||||||| ||||||| ||||| |||||| | || | ||||| || |||||||| ||| Sbjct: 307 atgtgggacatgtacacacgcaccggtgatgaggtccgacttccacgattctggcaggaa 366 Query: 462 gcatttgaggctgcatatgaggagcttgctggtgatgata 501 || ||||||||||| || || ||||||||||||||||||| Sbjct: 367 gcctttgaggctgcctacgaagagcttgctggtgatgata 406 Score = 105 bits (53), Expect = 3e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 208 tcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctctggt 267 |||||||||| |||||||||| |||||| | | |||||||| |||||||||||||||| Sbjct: 104 tcgggaaggggcggtacaaggtgtgggccttggcggccatcgcgctcctcgcgctctggt 163 Query: 268 ccatgttcgccgcctccgtcaccctccactggtcctccggc 308 |||||| ||||||||||| | |||||| ||||||||||||| Sbjct: 164 ccatgtccgccgcctccgcctccctccgctggtcctccggc 204
>gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C05 map C12819S, complete sequence Length = 113266 Score = 105 bits (53), Expect = 3e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 208 tcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctctggt 267 |||||||||| |||||||||| |||||| | | |||||||| |||||||||||||||| Sbjct: 49409 tcgggaaggggcggtacaaggtgtgggccttggcggccatcgcgctcctcgcgctctggt 49468 Query: 268 ccatgttcgccgcctccgtcaccctccactggtcctccggc 308 |||||| ||||||||||| | |||||| ||||||||||||| Sbjct: 49469 ccatgtccgccgcctccgcctccctccgctggtcctccggc 49509 Score = 99.6 bits (50), Expect = 2e-17 Identities = 110/130 (84%) Strand = Plus / Plus Query: 372 atggaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggtgat 431 |||||||| ||||| ||||||||| | || ||||||||| ||||||| ||||| |||||| Sbjct: 50946 atggaggagagggaaaaattagtgggtcgaatgtgggacatgtacacacgcaccggtgat 51005 Query: 432 catgtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggagcttgct 491 | || | ||||| || |||||||| ||||| ||||||||||| || || ||||||||| Sbjct: 51006 gaggtccgacttccacgattctggcaggaagcctttgaggctgcctacgaagagcttgct 51065 Query: 492 ggtgatgata 501 |||||||||| Sbjct: 51066 ggtgatgata 51075 Score = 48.1 bits (24), Expect = 0.056 Identities = 27/28 (96%) Strand = Plus / Plus Query: 342 cccctcctcgacgacctcgacccgctcg 369 ||||||||||||||||||||| |||||| Sbjct: 49552 cccctcctcgacgacctcgactcgctcg 49579
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 105 bits (53), Expect = 3e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 208 tcgggaagggccggtacaaggcatgggccctcgtcgccatcgccctcctcgcgctctggt 267 |||||||||| |||||||||| |||||| | | |||||||| |||||||||||||||| Sbjct: 16805192 tcgggaaggggcggtacaaggtgtgggccttggcggccatcgcgctcctcgcgctctggt 16805251 Query: 268 ccatgttcgccgcctccgtcaccctccactggtcctccggc 308 |||||| ||||||||||| | |||||| ||||||||||||| Sbjct: 16805252 ccatgtccgccgcctccgcctccctccgctggtcctccggc 16805292 Score = 99.6 bits (50), Expect = 2e-17 Identities = 110/130 (84%) Strand = Plus / Plus Query: 372 atggaggaaagggagaaattagtgcgccggatgtgggacttgtacacgcgcactggtgat 431 |||||||| ||||| ||||||||| | || ||||||||| ||||||| ||||| |||||| Sbjct: 16806729 atggaggagagggaaaaattagtgggtcgaatgtgggacatgtacacacgcaccggtgat 16806788 Query: 432 catgtatggcttccgcggttctggcaagaagcatttgaggctgcatatgaggagcttgct 491 | || | ||||| || |||||||| ||||| ||||||||||| || || ||||||||| Sbjct: 16806789 gaggtccgacttccacgattctggcaggaagcctttgaggctgcctacgaagagcttgct 16806848 Query: 492 ggtgatgata 501 |||||||||| Sbjct: 16806849 ggtgatgata 16806858 Score = 48.1 bits (24), Expect = 0.056 Identities = 27/28 (96%) Strand = Plus / Plus Query: 342 cccctcctcgacgacctcgacccgctcg 369 ||||||||||||||||||||| |||||| Sbjct: 16805335 cccctcctcgacgacctcgactcgctcg 16805362
>gb|AY111634.1| Zea mays CL11221_1 mRNA sequence Length = 673 Score = 85.7 bits (43), Expect = 3e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 402 atgtgggacttgtacacgcgcactggtgatcatgtatggcttccgcggttctggcaagaa 461 ||||||||| ||||||| || || ||||| | ||| ||||||| ||||||||||| || Sbjct: 599 atgtgggacatgtacacacggaccagtgatgaggtacggcttccacggttctggcaggag 540 Query: 462 gcatttgaggctgcatatgaggagcttgctggtgatgat 500 || |||||||||||||| ||||| ||||||||||||||| Sbjct: 539 gcgtttgaggctgcatacgaggaacttgctggtgatgat 501
>gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, complete sequence Length = 105308 Score = 50.1 bits (25), Expect = 0.014 Identities = 31/33 (93%) Strand = Plus / Plus Query: 453 tggcaagaagcatttgaggctgcatatgaggag 485 ||||| ||||||||||||||||| ||||||||| Sbjct: 15303 tggcaggaagcatttgaggctgcctatgaggag 15335
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Minus Query: 105 gtcaccggccaccagtaccacggcgtc 131 ||||||||||||||| ||||||||||| Sbjct: 352359 gtcaccggccaccagcaccacggcgtc 352333
>ref|XM_659639.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7127.2), mRNA Length = 1470 Score = 44.1 bits (22), Expect = 0.88 Identities = 25/26 (96%) Strand = Plus / Plus Query: 281 ctccgtcaccctccactggtcctccg 306 ||||||||||||| |||||||||||| Sbjct: 1149 ctccgtcaccctcgactggtcctccg 1174
>gb|DQ093593.1| HIV-1 isolate 03ZASK072B1 from South Africa, complete genome Length = 9123 Score = 44.1 bits (22), Expect = 0.88 Identities = 22/22 (100%) Strand = Plus / Plus Query: 368 cgagatggaggaaagggagaaa 389 |||||||||||||||||||||| Sbjct: 7048 cgagatggaggaaagggagaaa 7069
>emb|BX000530.10| Mouse DNA sequence from clone RP24-500B8 on chromosome 2, complete sequence Length = 45884 Score = 44.1 bits (22), Expect = 0.88 Identities = 22/22 (100%) Strand = Plus / Minus Query: 724 agcttcatgaagcaggctggtc 745 |||||||||||||||||||||| Sbjct: 25763 agcttcatgaagcaggctggtc 25742
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 tcctcgacgacctcgacccgc 366 ||||||||||||||||||||| Sbjct: 4017317 tcctcgacgacctcgacccgc 4017337
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 ggcgaccttgccgccgcctcc 326 ||||||||||||||||||||| Sbjct: 3711572 ggcgaccttgccgccgcctcc 3711552
>emb|CR762404.6| Zebrafish DNA sequence from clone DKEY-204H11 in linkage group 4, complete sequence Length = 180159 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tgcaaaaaagctaacctttat 702 ||||||||||||||||||||| Sbjct: 30327 tgcaaaaaagctaacctttat 30307
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 tcgccctcctcgcgctctggt 267 ||||||||||||||||||||| Sbjct: 1659985 tcgccctcctcgcgctctggt 1659965
>emb|AL355136.19| Human DNA sequence from clone RP11-435P18 on chromosome 13, complete sequence Length = 200059 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 697 ctttatgctgtatcgaagtta 717 ||||||||||||||||||||| Sbjct: 93246 ctttatgctgtatcgaagtta 93266
>emb|CR376754.6| Zebrafish DNA sequence from clone CH211-254O14 in linkage group 2, complete sequence Length = 84275 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 575 taattataattagaaacagta 595 ||||||||||||||||||||| Sbjct: 43982 taattataattagaaacagta 43962
>ref|XM_955530.1| Neurospora crassa OR74A hypothetical protein (NCU01394.1) partial mRNA Length = 3801 Score = 42.1 bits (21), Expect = 3.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 gccctcgtcgccatcgccctcctcg 258 |||||||||||||||| |||||||| Sbjct: 40 gccctcgtcgccatcgtcctcctcg 64
>emb|BX294185.5| Zebrafish DNA sequence from clone CH211-232L14 in linkage group 24, complete sequence Length = 115427 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 682 tgcaaaaaagctaacctttat 702 ||||||||||||||||||||| Sbjct: 20210 tgcaaaaaagctaacctttat 20230
>emb|BX548167.10| Zebrafish DNA sequence from clone DKEY-46L15 in linkage group 20, complete sequence Length = 135292 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tgcaaaaaagctaacctttat 702 ||||||||||||||||||||| Sbjct: 34818 tgcaaaaaagctaacctttat 34798
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 tcctcgacgacctcgacccgc 366 ||||||||||||||||||||| Sbjct: 3417463 tcctcgacgacctcgacccgc 3417483
>emb|AL954352.10| Mouse DNA sequence from clone RP23-159J7 on chromosome 4, complete sequence Length = 178280 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 722 gcagcttcatgaagcaggctg 742 ||||||||||||||||||||| Sbjct: 100704 gcagcttcatgaagcaggctg 100684
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 tcgccctcctcgcgctctggt 267 ||||||||||||||||||||| Sbjct: 32939 tcgccctcctcgcgctctggt 32959
>gb|L26955.1|STMBLEANKB Streptomyces verticillus beta-hydroxylase, bleomycin/phleomycin binding protein, ankyrin homologue, bleomycin and transport protein gene, complete cds Length = 7183 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 cgctgctcgggaagggccggt 222 ||||||||||||||||||||| Sbjct: 474 cgctgctcgggaagggccggt 494 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 151,432,416 Number of extensions: 8075385 Number of successful extensions: 162567 Number of sequences better than 10.0: 28 Number of HSP's gapped: 162562 Number of HSP's successfully gapped: 39 Length of query: 924 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 901 Effective length of database: 18,503,978,556 Effective search space: 16672084678956 Effective search space used: 16672084678956 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)