Clone Name	FLbaf44a22
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	2668	0.0
2	gb|BC029790.1| Homo sapiens cDNA clone MGC:35458 IMAGE:5192697, ...	2377	0.0
3	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	2258	0.0
4	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	1564	0.0
5	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	1483	0.0
6	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	1344	0.0
7	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	987	0.0
8	emb|CT830274.1| Oryza sativa (indica cultivar-group) cDNA clone:...	979	0.0
9	ref|NM_001075087.1| Oryza sativa (japonica cultivar-group) Os11g...	979	0.0
10	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	979	0.0
11	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	979	0.0
12	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	979	0.0
13	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	979	0.0
14	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	979	0.0
15	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	971	0.0
16	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	959	0.0
17	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	908	0.0
18	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	876	0.0
19	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	844	0.0
20	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	831	0.0
21	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	698	0.0
22	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	698	0.0
23	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	698	0.0
24	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	654	0.0
25	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	632	e-177
26	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	575	e-160
27	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	563	e-157
28	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) (RC...	545	e-151
29	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) (RC...	545	e-151
30	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) (RC...	545	e-151
31	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	545	e-151
32	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	545	e-151
33	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	545	e-151
34	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	545	e-151
35	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	537	e-149
36	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	537	e-149
37	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	537	e-149
38	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	531	e-147
39	emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat...	521	e-144
40	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	513	e-142
41	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	513	e-142
42	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	513	e-142
43	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	509	e-140
44	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	502	e-138
45	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	494	e-136
46	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	452	e-123
47	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	410	e-111
48	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	406	e-109
49	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	404	e-109
50	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	400	e-108
51	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	398	e-107
52	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	396	e-106
53	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	394	e-106
54	gb|DQ915974.1| Acer rubrum cultivar Florida Flame chloroplast ri...	391	e-105
55	gb|DQ915973.1| Acer rubrum cultivar Florida Flame chloroplast ri...	391	e-105
56	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	377	e-100
57	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	377	e-100
58	gb|DQ915976.1| Acer rubrum cultivar North Wood chloroplast ribul...	375	e-100
59	gb|DQ915975.1| Acer rubrum cultivar North Wood chloroplast ribul...	375	e-100
60	gb|AC189306.1| Brassica rapa subsp. pekinensis clone KBrB032C14,...	369	2e-98
61	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	355	4e-94
62	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	343	1e-90
63	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	337	8e-89
64	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	337	8e-89
65	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	337	8e-89
66	gb|DQ486905.1| Pachysandra terminalis ribulose-1,5-bisphosphate ...	333	1e-87
67	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	331	5e-87
68	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	329	2e-86
69	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	323	1e-84
70	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	323	1e-84
71	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	323	1e-84
72	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	323	1e-84
73	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	323	1e-84
74	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	323	1e-84
75	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	323	1e-84
76	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	323	1e-84
77	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	315	3e-82
78	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	315	3e-82
79	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	315	3e-82
80	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	315	3e-82
81	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	315	3e-82
82	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	315	3e-82
83	dbj|AK230177.1| Arabidopsis thaliana mRNA for Rubisco activase, ...	305	3e-79
84	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	297	7e-77
85	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	283	1e-72
86	gb|DQ068132.1| Brassica napus isolate mutant Cr3529 clone Bncr24...	266	3e-67
87	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	266	3e-67
88	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	242	4e-60
89	emb|Y10657.1|CLRCAGENE C.littorale rca gene	236	2e-58
90	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	220	1e-53
91	gb|DQ068155.1| Brassica napus isolate mutant Cr3529 clone Bn12 u...	216	2e-52
92	gb|DQ068131.1| Brassica napus isolate mutant Cr3529 clone Bncr23...	216	2e-52
93	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	198	5e-47
94	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	182	3e-42
95	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	176	2e-40
96	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	168	4e-38
97	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	141	1e-29
98	gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence	133	2e-27
99	ref|NM_001075088.1| Oryza sativa (japonica cultivar-group) Os11g...	125	6e-25
100	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	123	2e-24
101	gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas...	121	9e-24
102	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	117	1e-22
103	gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet...	101	9e-18
104	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	92	8e-15
105	emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase	80	3e-11
106	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	78	1e-10
107	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	78	1e-10
108	dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D...	78	1e-10
109	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	78	1e-10
110	gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic s...	68	1e-07
111	ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase (AT1G...	56	5e-04
112	gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	5e-04
113	gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	5e-04
114	dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ...	56	5e-04
115	emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co...	56	5e-04
116	gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N...	56	5e-04
117	emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co...	54	0.002
118	gb|AC189500.1| Brassica rapa subsp. pekinensis clone KBrB086N06,...	48	0.11
119	gb|CP000479.1| Mycobacterium avium 104, complete genome	46	0.45
120	gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ...	46	0.45
121	gb|CP000448.1| Syntrophomonas wolfei subsp. wolfei str. Goetting...	44	1.8
122	gb|CP000394.1| Granulibacter bethesdensis CGDNIH1, complete genome	44	1.8
123	gb|CP000377.1| Silicibacter sp. TM1040, complete genome	44	1.8
124	gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome	44	1.8
125	gb|AC104980.5| Homo sapiens chromosome 8, clone RP11-281D17, com...	44	1.8
126	gb|AC105193.4| Homo sapiens chromosome 8, clone RP11-379M16, com...	44	1.8
127	gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl...	44	1.8
128	gb|AE015925.1| Chlamydophila caviae GPIC, complete genome	44	1.8
129	emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, c...	44	1.8
130	dbj|AP004289.2| Homo sapiens genomic DNA, chromosome 8q23, clone...	44	1.8
131	gb|DQ863313.1| Penicillium marneffei RAM2-like protein gene, com...	42	7.0
132	gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, comp...	42	7.0
133	gb|AC147148.2| Pan troglodytes BAC clone CH251-267E22 from Y, co...	42	7.0
134	gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, comp...	42	7.0
135	gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, compl...	42	7.0
136	gb|AC104302.2| Homo sapiens chromosome 3 clone RP11-379L20, comp...	42	7.0
137	emb|CR701838.2|CNS0G4HM Tetraodon nigroviridis full-length cDNA	42	7.0
138	emb|CR686472.2|CNS0FSMS Tetraodon nigroviridis full-length cDNA	42	7.0
139	emb|CR681817.2|CNS0FP1H Tetraodon nigroviridis full-length cDNA	42	7.0
140	emb|CR680161.1|CNS0FNRH Tetraodon nigroviridis full-length cDNA	42	7.0
141	emb|CR675309.2|CNS0FK1F Tetraodon nigroviridis full-length cDNA	42	7.0
142	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	42	7.0
143	dbj|BS000667.1| Pan troglodytes chromosome Y clone:PTBY-009K22, ...	42	7.0
144	emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom...	42	7.0
145	gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complet...	42	7.0
146	emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Co...	42	7.0
147	emb|BX649334.5| Zebrafish DNA sequence from clone DKEYP-6A3 in l...	42	7.0
148	emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa...	42	7.0
149	gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, comp...	42	7.0

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709
 Score = 2668 bits (1346), Expect = 0.0
 Identities = 1384/1394 (99%), Gaps = 2/1394 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   tgatcaccagcacagccgcgcgcatccaccgttgctagcaaggtcgaccaagcagcacag 85
            ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 81   tgatcgccagcacagccgcgcgcatccaccgttg-tagcaaggtcgaccaagcagcacag 139

                                                                        
Query: 86   agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140  agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 199

                                                                        
Query: 146  tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200  tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 259

                                                                        
Query: 206  aggccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgaca 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260  aggccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgaca 319

                                                                        
Query: 266  agtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagg 325
            ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 320  agtggaagggtcttgctaccgatatctccgacgaccagcaggacatcaccagagggaagg 379

                                                                        
Query: 326  gcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctca 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380  gcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctca 439

                                                                        
Query: 386  gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440  gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 499

                                                                        
Query: 446  gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttca 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500  gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttca 559

                                                                        
Query: 506  tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560  tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 619

                                                                        
Query: 566  gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620  gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 679

                                                                        
Query: 626  gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680  gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 739

                                                                        
Query: 686  accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740  accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 799

                                                                        
Query: 746  ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800  ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 859

                                                                        
Query: 806  tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860  tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 919

                                                                        
Query: 866  acaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgc 925
            ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920  acaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgc 979

                                                                        
Query: 926  tctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtg 985
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980  tctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtg 1039

                                                                        
Query: 986  acgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctg 1045
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1040 acgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtctgtgacgagtctg 1099

                                                                        
Query: 1046 tcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtg 1105
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 tcgtaaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtg 1159

                                                                        
Query: 1106 ctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattg 1165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 ctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattg 1219

                                                                        
Query: 1166 gcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacag 1225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 gcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacag 1279

                                                                        
Query: 1226 tcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtg 1285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 tcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtg 1339

                                                                        
Query: 1286 tgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcga 1345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 tgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcga 1399

                                                                        
Query: 1346 tgaagactggttccttctacggttagaaaattctccatac-acacccaccatctcttgct 1404
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1400 tgaagactggttccttctacggttagaaaattctccatacaacacccaccatctcttgct 1459

                          
Query: 1405 gcataggaggaggt 1418
            ||||||||||||||
Sbjct: 1460 gcataggaggaggt 1473



 Score =  383 bits (193), Expect = e-102
 Identities = 224/229 (97%), Gaps = 4/229 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1590 aggtaaaggagcacagcaaggtactttgcccg-tgccggaaggttgcaccgaccaaaatg 1648
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1470 aggtaaaggagcacagcaaggtactttgcccgatgccggaaggttgcaccgaccaaaatg 1529

                                                                        
Query: 1649 ccaagaactacgacccaacggcaaggagcgacg-acggcagctgcctttacaccttttaa 1707
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1530 ccaagaactacgacccaacggcaaggagcgacgaacggcagctgcctttacaccttttaa 1589

                                                                        
Query: 1708 gcatgccacttttaatatctgatgttttacctac-ctaagtccgcatcgcatccaagcga 1766
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1590 gcatgccacttttaatatctgatgttttacctacactaagtccgcatcgcatccaagcga 1649

                                                             
Query: 1767 ttgctgggcatgttttgttaatatatctctaaat-atattgagtatacc 1814
            |||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 1650 ttgctgggcatgttttgttaatatatctctaaataatattgtgtatacc 1698

---

>gb|BC029790.1| Homo sapiens cDNA clone MGC:35458 IMAGE:5192697, complete cds
          Length = 1643

 Score = 2377 bits (1199), Expect = 0.0
 Identities = 1346/1394 (96%), Gaps = 2/1394 (0%)
 Strand = Plus / Plus

                                                                        
Query: 25   ctgatcaccagcacagccgcgcgcatccaccgttgctagcaaggtcgaccaagcagcaca 84
            |||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||
Sbjct: 1    ctgatcaccagcacagccgcg--catccaccgctgctagcaaggtcgagcaagcagcaca 58

                                                                        
Query: 85   gagatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttc 144
            |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 59   gagatggctgctgccttctcctccaccgtcggtgccccggcttctacgccgaccaacttc 118

                                                                        
Query: 145  ctcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcc 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119  ctcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcc 178

                                                                        
Query: 205  aaggccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgac 264
            ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 179  aaggccaacaggttcacggtcatggcagcggaaaacatcgacgagaagaggaacaccgac 238

                                                                        
Query: 265  aagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaag 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239  aagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaag 298

                                                                        
Query: 325  ggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctc 384
            |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 299  ggcatcgtggactccctcttccaggcgcccactggcgacggcacccacgaggccgtcctc 358

                                                                        
Query: 385  agctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatggga 444
            ||||| |||||||||||||||||||| ||   ||||||||||||||||||||||||||||
Sbjct: 359  agctcatacgagtacgtcagccagggactcaagaagtacgacttcgacaacaccatggga 418

                                                                        
Query: 445  ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 419  ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaagaacttc 478

                                                                        
Query: 505  atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479  atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 538

                                                                        
Query: 565  ggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatg 624
            |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 539  ggaaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatgatg 598

                                                                        
Query: 625  agtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcgg 684
            ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 599  agtgccggagagctggagagtggcaacgccggagagccagccaagctcatcaggcagcgg 658

                                                                        
Query: 685  taccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgat 744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659  taccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgat 718

                                                                        
Query: 745  cttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatg 804
            |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 719  cttgacgccggtgcgggtaggatgggcgggaccacacagtacaccgtcaacaaccagatg 778

                                                                        
Query: 805  gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 864
            |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 779  gtgaacgccaccctcatgaacatcgccgatgcccccaccaatgtgcagctcccaggcatg 838

                                                                        
Query: 865  tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 924
            |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 839  tacaacaaggaggagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacg 898

                                                                        
Query: 925  ctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgt 984
             | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 899  ttgtacgcccctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgc 958

                                                                        
Query: 985  gacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtct 1044
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 959  gacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtcc 1018

                                                                        
Query: 1045 gtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgt 1104
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1019 gtcgtcaagatcgtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgt 1078

                                                                        
Query: 1105 gctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacatt 1164
            ||||||||||||||||| |||||||||||||||||   ||||||||| ||||||||||||
Sbjct: 1079 gctcgggtgtacgacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacatt 1138

                                                                        
Query: 1165 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 1224
            ||||||| ||||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 1139 ggcaagaagctggtgaactcgcgggacggaccagtgacctttgagcagccaaagatgaca 1198

                                                                        
Query: 1225 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 1284
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 gtggagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 1258

                                                                        
Query: 1285 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 1344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 1318

                                                                        
Query: 1345 atgaagactggttccttctacggttagaaaattctccatacacacccaccatctcttgct 1404
            |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1319 atgaagactggtaccttctacggttagaacattctccatacacacccaccatctcttgct 1378

                          
Query: 1405 gcataggaggaggt 1418
            ||||||||||||||
Sbjct: 1379 gcataggaggaggt 1392



 Score =  248 bits (125), Expect = 6e-62
 Identities = 190/209 (90%), Gaps = 7/209 (3%)
 Strand = Plus / Plus

                                                                        
Query: 1590 aggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgc 1649
            ||||||||| |||||||||||||||||||| || |||| ||| ||||||||||| | |||
Sbjct: 1389 aggtaaaggggcacagcaaggtactttgcctgtaccggcaggatgcaccgaccagactgc 1448

                                                                        
Query: 1650 caagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagc 1709
            |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 1449 caagaacttcgacccaacggcgaggagtgacgacggcagctgcctttacaccttttaagc 1508

                                                                        
Query: 1710 atgccacttttaatatctgatgttttacc-----tacctaagt-ccgcatcgcatccaag 1763
            ||||||  ||||||||||||||||||| |     ||||||||| ||||||||||||||||
Sbjct: 1509 atgcca-atttaatatctgatgttttatcctttgtacctaagtaccgcatcgcatccaag 1567

                                         
Query: 1764 cgattgctgggcatgttttgttaatatat 1792
            |||||||||||||||||||||||||||||
Sbjct: 1568 cgattgctgggcatgttttgttaatatat 1596

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 2258 bits (1139), Expect = 0.0
 Identities = 1160/1167 (99%)
 Strand = Plus / Plus

                                                                        
Query: 202  tccaaggccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacacc 261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tccaaggccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacacc 60

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||
Sbjct: 61   gacaagtggaagggtcttgctaccgatatctccgacgaccagcaggacatcaccagaggg 120

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 180

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 240

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 300

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 360

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 420

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 480

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 540

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 600

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 660

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  atgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 720

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 780

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 781  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtctgtgacgag 840

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  tctgtcgtaaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 900

                                                                        
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaac 1161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  cgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaac 960

                                                                        
Query: 1162 attggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatg 1221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  attggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatg 1020

                                                                        
Query: 1222 acagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaag 1281
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 acagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaag 1080

                                                                        
Query: 1282 cgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggat 1341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggat 1140

                                       
Query: 1342 gcgatgaagactggttccttctacggt 1368
            |||||||||||||||||||||||||||
Sbjct: 1141 gcgatgaagactggttccttctacggt 1167



 Score =  436 bits (220), Expect = e-118
 Identities = 223/224 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1591 ggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgcc 1650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 ggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgcc 1224

                                                                        
Query: 1651 aagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagca 1710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 aagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagca 1284

                                                                        
Query: 1711 tgccacttttaatatctgatgttttacctacctaagtccgcatcgcatccaagcgattgc 1770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1285 tgccacttttaatatctgatgttttacctacctaagtccgcatcgcatccaagcgattgc 1344

                                                        
Query: 1771 tgggcatgttttgttaatatatctctaaatatattgagtatacc 1814
            |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1345 tgggcatgttttgttaatatatctctaaatatattgtgtatacc 1388

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score = 1564 bits (789), Expect = 0.0
 Identities = 1065/1157 (92%), Gaps = 2/1157 (0%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || 
Sbjct: 247  gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggt 306

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            ||||| ||||| |||||  | ||||||||||||| |||||| || |||||||||||||||
Sbjct: 307  aagggtatcgtcgactccttgttccaggcgcccatgggcgatggnacccacgaggccgtc 366

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||
Sbjct: 367  ctcagctcntacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatg 426

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| |||
Sbjct: 427  ggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaac 486

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 487  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggt 546

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || || ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 547  caggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatg 606

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 607  atgagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggcag 666

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 667  cggtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaac 726

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            || || ||||| || |||||| |||||||||| ||||| ||||||||||| |||||||||
Sbjct: 727  gacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaacaaccag 786

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            |||||||||||||||||||||||||||||||| || |||||||||||||||||||| || 
Sbjct: 787  atggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgcagctcccgggg 846

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||||||||||||||| |||||| |||||||||| ||||| ||||||
Sbjct: 847  atgtacaacaaggaggagaacccccgtgtccccatcatcgtcaccggcaacgacttctcg 906

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || |||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 907  acgctgtacgcgcccctcatccgtgacggtcgtatggagaagttctactgggcgcccacc 966

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || || ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 967  cgcgaggaccgtatcggcgtctgcaagggtatcttccagaccgacaacgtcagcgacgag 1026

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
            ||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 1027 tctgtcgtcaagatcgtcgacacnttcccaggacagtccatcgacttcttcggtgctctg 1086

                                                                        
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaac 1161
            ||||||||||||||||||| ||||||||||||||||||    || |||||||| ||||||
Sbjct: 1087 cgtgctcgggtgtacgacgttgaggtgcgcaagtgggtgtcgtccaccggaattgagaac 1146

                                                                        
Query: 1162 attggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatg 1221
            || ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1147 atcggcaagaggctggtgaactcgcgggacggacccgtcaccttcgagcagcccaagatg 1206

                                                                        
Query: 1222 acagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaag 1281
            || || |||||| |||| |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1207 acggtggagaagttgctggagtacggccacatgcttgtccaggagcaggacaatgtcaag 1266

                                                                        
Query: 1282 cgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggat 1341
            |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| |||||
Sbjct: 1267 cgtgtgcagcttgcggacacttacatgagccaggcagctctgggtgatgcgaacaaggat 1326

                                                                        
Query: 1342 gcgatgaagactggttccttctacggttagaaaattctccatacacacccaccatctctt 1401
            || ||||||||||||||||||||||||||||| | ||| |||  ||||||||||||||||
Sbjct: 1327 gccatgaagactggttccttctacggttagaacactcttcat--acacccaccatctctt 1384

                             
Query: 1402 gctgcataggaggaggt 1418
            |||||||||||||||||
Sbjct: 1385 gctgcataggaggaggt 1401



 Score =  222 bits (112), Expect = 3e-54
 Identities = 138/147 (93%)
 Strand = Plus / Plus

                                                                       
Query: 84  agagatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaactt 143
           ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| |||
Sbjct: 66  agagatggctgctgccttctcctccaccgtcggagctccggcttccacgccnaccagctt 125

                                                                       
Query: 144 cctcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctc 203
           |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 126 cctcggcaacaagctcaagaagcaggtgacctcggcagtgaactaccatggcaagagctt 185

                                      
Query: 204 caaggccaacaggttcacagtcatggc 230
           |||||||||||||||||| ||||||||
Sbjct: 186 caaggccaacaggttcaccgtcatggc 212



 Score =  182 bits (92), Expect = 3e-42
 Identities = 172/196 (87%), Gaps = 7/196 (3%)
 Strand = Plus / Plus

                                                                        
Query: 1590 aggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgc 1649
            ||||||||||||||| ||||| |||||||| |||||||||||||| |||||||   ||||
Sbjct: 1398 aggtaaaggagcacaacaaggcactttgcctgtgccggaaggttgtaccgaccgggatgc 1457

                                                                        
Query: 1650 caagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagc 1709
            |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 1458 caagaacttcgacccaaccgcgaggagcgacgacggcagctgcctttacaccttttaagc 1517

                                                                        
Query: 1710 atgccacttttaata-tctgatgttttac-----ctacctaag-tccgcatcgcatccaa 1762
            |||||||||| | || |||||||||| ||      ||||||||  ||||||||||| |||
Sbjct: 1518 atgccactttaattattctgatgtttcactctttgtacctaagcaccgcatcgcatacaa 1577

                            
Query: 1763 gcgattgctgggcatg 1778
            |||| |||||||||||
Sbjct: 1578 gcgactgctgggcatg 1593

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score = 1483 bits (748), Expect = 0.0
 Identities = 1017/1107 (91%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || 
Sbjct: 257  gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggt 316

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            ||||| ||||| ||||| || ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 317  aagggtatcgtcgactccctgttccaggcgcccatgggcgatggcacccacgaggccgtc 376

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||
Sbjct: 377  ctcagctcctacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatg 436

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| |||
Sbjct: 437  ggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaac 496

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggt 556

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || || ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 557  caggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatg 616

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 617  atgagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggcag 676

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 677  cggtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaac 736

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            || || ||||| || |||||| |||||||||| ||||| ||||||||||| |||||||||
Sbjct: 737  gacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaacaaccag 796

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            |||||||||||||||||||||||||||||||| || ||||||||||||||||| || || 
Sbjct: 797  atggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgcagcttccgggg 856

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||||||||||||||| |||||  | |||||||| ||||| || |||
Sbjct: 857  atgtacaacaaggaggagaacccccgtgttcccattatngtcaccggcaacgacttttcg 916

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || || | ||| ||||||||||||||||| |||||||| ||||||
Sbjct: 917  acgctgtacgccccccttattcctgacggtcgtatggagaagttttactgggcgcccacc 976

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || || ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 977  cgcgaggaccgtatcggcgtctgcaagggtatcttccagaccgacaacgtcagcgacgag 1036

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
            ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 1037 tctgtcgtcaagatcgtcgacaccttcccaggacagtccatcgacttcttcggtgctctg 1096

                                                                        
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaac 1161
            |||||||||||||||||||| |||||||||||||||||    || |||||||| ||||||
Sbjct: 1097 cgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgtcgtccaccggaattgagaac 1156

                                                                        
Query: 1162 attggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatg 1221
            || ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1157 atcggcaagaggctggtgaactcgcgggacggacccgtcaccttcgagcagcccaagatg 1216

                                                                        
Query: 1222 acagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaag 1281
            || || |||||| |||| |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1217 acggtggagaagttgctggagtacggccacatgcttgtccaggagcaggacaatgtcaag 1276

                                                                        
Query: 1282 cgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggat 1341
            |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| |||||
Sbjct: 1277 cgtgtgcagcttgcggacacttacatgagccaggcagctctgggtgatgcgaacaaggat 1336

                                       
Query: 1342 gcgatgaagactggttccttctacggt 1368
            || ||||||||||||||||||||||||
Sbjct: 1337 gccatgaagactggttccttctacggt 1363



 Score =  228 bits (115), Expect = 6e-56
 Identities = 139/147 (94%)
 Strand = Plus / Plus

                                                                       
Query: 84  agagatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaactt 143
           ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||
Sbjct: 76  agagatggctgctgccttctcctccaccgtcggagctccggcttccacgccgaccagctt 135

                                                                       
Query: 144 cctcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctc 203
           |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 136 cctcggcaacaagctcaagaagcaggtgacctcggcagtgaactaccatggcaagagctt 195

                                      
Query: 204 caaggccaacaggttcacagtcatggc 230
           |||||||||||||||||| ||||||||
Sbjct: 196 caaggccaacaggttcaccgtcatggc 222



 Score =  176 bits (89), Expect = 2e-40
 Identities = 119/129 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1591 ggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgcc 1650
            |||||||||||||| ||||| |||||||| |||||||||||||| |||||||   |||||
Sbjct: 1361 ggtaaaggagcacaacaaggcactttgcctgtgccggaaggttgtaccgaccgggatgcc 1420

                                                                        
Query: 1651 aagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagca 1710
            ||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 aagaacttcgacccaaccgcgaggagcgacgacggcagctgcctttacaccttttaagca 1480

                     
Query: 1711 tgccacttt 1719
            |||||||||
Sbjct: 1481 tgccacttt 1489

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score = 1344 bits (678), Expect = 0.0
 Identities = 716/731 (97%), Gaps = 3/731 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1084 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 1143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080

                                                                        
Query: 1144 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 1203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 7140

                                                                        
Query: 1204 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 1263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7141 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 7200

                                                                        
Query: 1264 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 1323
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7201 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 7260

                                                                        
Query: 1324 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 1383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7261 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 7320

                                                                        
Query: 1384 acacacccaccatctcttgctgcataggaggaggtgaactacgcacaatcttcttatact 1443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7321 acacacccaccatctcttgctgcataggaggaggtgaactacgcacaatcttcttatact 7380

                                                                        
Query: 1444 ttcagcaactactttacatgcatacttctttctcactttcttacttcggnnnnnnnnngg 1503
            |||||||||||||||||||||||||||||||||||||||||||||||||         ||
Sbjct: 7381 ttcagcaactactttacatgcatacttctttctcactttcttacttcggaaaaaaaaagg 7440

                                                                        
Query: 1504 gagtggaggcctgtttttcttacctgctcttccgccggcatatcaagctcatcttctcat 1563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7441 gagtggaggcctgtttttcttacctgctcttccgccggcatatcaagctcatcttctcat 7500

                                                                        
Query: 1564 cacgtcgtccaaaacaattaaattgcaggtaaaggagcacagcaaggtactttgcccgtg 1623
            ||   |||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 7501 ca---cgtccaaaacaattaaattcgaggtaaaggagcacagcaaggtactttgcccgtg 7557

                                                                        
Query: 1624 ccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgac 1683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7558 ccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgac 7617

                                                                        
Query: 1684 ggcagctgcctttacaccttttaagcatgccacttttaatatctgatgttttacctacct 1743
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7618 ggcagctgcctttacaccttttaagcatgccacttttaatatctgatgttttacctacct 7677

                                                                        
Query: 1744 aagtccgcatcgcatccaagcgattgctgggcatgttttgttaatatatctctaaatata 1803
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7678 aagtccgcatcgcatccaagcgattgctgggcatgttttgttaatatatctctaaatata 7737

                       
Query: 1804 ttgagtatacc 1814
            ||| |||||||
Sbjct: 7738 ttgtgtatacc 7748



 Score =  922 bits (465), Expect = 0.0
 Identities = 471/473 (99%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6408 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 6467

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6468 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 6527

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6528 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 6587

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6588 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 6647

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 6648 gctccctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaa 6707

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6708 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 6767

                                                                        
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 1031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6768 ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 6827

                                                                 
Query: 1032 cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattg 1084
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6828 cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattg 6880



 Score =  831 bits (419), Expect = 0.0
 Identities = 763/877 (87%), Gaps = 3/877 (0%)
 Strand = Plus / Plus

                                                                        
Query: 267  gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 326
            |||||||||||| || ||||| ||||| ||||||||||||||||||||  | ||||| ||
Sbjct: 2939 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 2998

                                                                        
Query: 327  catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 386
            |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| ||
Sbjct: 2999 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 3058

                                                                        
Query: 387  ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 446
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 3059 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 3118

                                                                        
Query: 447  cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 506
              | |||||||| || || ||||||||||||||  | ||||| ||| |||| ||||||||
Sbjct: 3119 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 3178

                                                                        
Query: 507  gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 566
            ||| || |||||||||||| | || |||||| |||||||||||||||||||||| || ||
Sbjct: 3179 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 3238

                                                                        
Query: 567  aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 626
             || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3239 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 3298

                                                                        
Query: 627  tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 686
             ||||| ||||||||||| || ||||   | ||||| |||||||| ||| ||||| ||||
Sbjct: 3299 cgccggtgagctggagagcggcaacg---gcgagccggccaagctgatccggcagaggta 3355

                                                                        
Query: 687  ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 746
            ||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| ||
Sbjct: 3356 ccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacct 3415

                                                                        
Query: 747  tgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggt 806
             ||||| || |||||  |||||||||| || ||||||||||| || ||||||||||||||
Sbjct: 3416 ggacgccggcgcgggccggatgggcgggacgacgcagtacacggtgaacaaccagatggt 3475

                                                                        
Query: 807  gaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgta 866
            |||||||||||||||||||||||| || || |||||||||||||||||||| || |||||
Sbjct: 3476 gaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagctcccggggatgta 3535

                                                                        
Query: 867  caacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgct 926
            ||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 3536 caacaaggaggagaacccccgcgtgcccatcatcgtcaccggcaacgacttctcgacgct 3595

                                                                        
Query: 927  ctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtga 986
             |||||||| ||||||||||| || || |||||||||||||||||||| |||||||| ||
Sbjct: 3596 gtacgctcccctgatccgtgacgggcgcatggagaagttctactgggcgcccacccgcga 3655

                                                                        
Query: 987  cgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgt 1046
             ||||| ||||| || |||||||| |||||||  |||||||| |||   |||||| | ||
Sbjct: 3656 ggaccgcatcggcgtgtgcaagggcatcttccgcaccgacaacgtcccggacgaggccgt 3715

                                                                        
Query: 1047 cgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgc 1106
             || | | | || ||||||||||| || || ||||| ||||| ||||| || ||||| ||
Sbjct: 3716 ggtgaggctggtggacaccttcccggggcagtccatcgacttcttcggcgcgctgcgggc 3775

                                                 
Query: 1107 tcgggtgtacgacgatgaggtgcgcaagtgggtcggc 1143
             |||||||||||||| |||||||||||||||||||||
Sbjct: 3776 acgggtgtacgacgacgaggtgcgcaagtgggtcggc 3812



 Score =  783 bits (395), Expect = 0.0
 Identities = 401/403 (99%)
 Strand = Plus / Plus

                                                                        
Query: 123  ggcttctacgccgaccaacttcctcgggaagaagctcaagaagcaggtgacctcggccgt 182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5518 ggcttctacgccgaccaacttcctcgggaagaagctcaagaagcaggtgacctcggccgt 5577

                                                                        
Query: 183  gaactaccatggcaagagctccaaggccaacaggttcacagtcatggcagcggagaacat 242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5578 gaactaccatggcaagagctccaaggccaacaggttcacagtcatggcagcggagaacat 5637

                                                                        
Query: 243  cgacgagaagaggaacaccgacaagtggaagggtcttgcgtacgatatctccgacgacca 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5638 cgacgagaagaggaacaccgacaagtggaagggtcttgcgtacgatatctccgacgacca 5697

                                                                        
Query: 303  gcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacgggcga 362
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 5698 gcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacggggca 5757

                                                                        
Query: 363  cggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagta 422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5758 cggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagta 5817

                                                                        
Query: 423  cgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgt 482
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5818 cgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgt 5877

                                                       
Query: 483  tgtccatctctccaaaaacttcatgaccctgcccaacatcaag 525
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5878 tgtccatctctccaaaaacttcatgaccctgcccaacatcaag 5920



 Score =  210 bits (106), Expect = 1e-50
 Identities = 120/122 (98%), Gaps = 2/122 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    gagcagcagcagtcattcatcactgatcaccagcacagccgcgcgcatccaccgttgcta 62
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5279 gagcagcagcagt-attcatcactgatcaccagcacagccgcgcgcatccaccgttg-ta 5336

                                                                        
Query: 63   gcaaggtcgaccaagcagcacagagatggctgctgccttctcctccaccgtcggggctcc 122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5337 gcaaggtcgaccaagcagcacagagatggctgctgccttctcctccaccgtcggggctcc 5396

              
Query: 123  gg 124
            ||
Sbjct: 5397 gg 5398



 Score =  174 bits (88), Expect = 7e-40
 Identities = 88/88 (100%)
 Strand = Plus / Plus

                                                                        
Query: 524  agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6070 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 6129

                                        
Query: 584  agcttgtgttcgccaagatgggcatcaa 611
            ||||||||||||||||||||||||||||
Sbjct: 6130 agcttgtgttcgccaagatgggcatcaa 6157



 Score = 81.8 bits (41), Expect = 8e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1204 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 1263
            ||||| ||||| ||||||||  | ||||||||  | |||||||| |||||||| ||||||
Sbjct: 3873 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 3932

                                         
Query: 1264 gagcaggacaatgtcaagcgtgtgcagct 1292
            |||||||| || |||||||||||||||||
Sbjct: 3933 gagcaggagaacgtcaagcgtgtgcagct 3961

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  987 bits (498), Expect = 0.0
 Identities = 783/878 (89%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 240  gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 299

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 300  aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 359

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 360  ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 419

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 420  ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 479

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 480  ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 539

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 540  cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 599

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 600  atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 659

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 660  cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 719

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||
Sbjct: 720  gatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccag 779

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||| 
Sbjct: 780  atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccctggg 839

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| 
Sbjct: 840  atgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctcc 899

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 900  acgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacc 959

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||
Sbjct: 960  cgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgag 1019

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
                |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| 
Sbjct: 1020 gacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctctt 1079

                                                  
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            ||||| || || |||||||| |||||||||||||||||
Sbjct: 1080 cgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1117



 Score =  172 bits (87), Expect = 3e-39
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                       
Query: 86  agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 145
           |||||||||||||||||||||||||||| || |||||||| || || |||||||||||||
Sbjct: 61  agatggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcc 120

                                                                       
Query: 146 tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 205
           | ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 121 tggggaagaagctgaagaagcaggtgacatcggcggtgaactaccatggcaagagctcca 180

                          
Query: 206 aggccaacaggttca 220
           |   |||||||||||
Sbjct: 181 acatcaacaggttca 195



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 1457 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1516

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||||||||||||||||
Sbjct: 1517 gcgacgacggcagctgcctttacaccttttaagca 1551



 Score =  123 bits (62), Expect = 2e-24
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1134 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1193

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1194 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1253

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1254 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1313

                                              
Query: 1336 caggatgcgatgaagactggttccttctacggtt 1369
               || || |||||||||||||||||||||||||
Sbjct: 1314 tccgacgccatgaagactggttccttctacggtt 1347

---

>emb|CT830274.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI234L24, full
            insert sequence
          Length = 1707

 Score =  979 bits (494), Expect = 0.0
 Identities = 782/878 (89%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 244  gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 303

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 304  aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 363

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 364  ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 423

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 424  ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 483

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 484  ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 543

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 544  cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 603

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 604  atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 663

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 664  cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 723

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||
Sbjct: 724  gatctcgacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccag 783

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| || 
Sbjct: 784  atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccggg 843

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| 
Sbjct: 844  atgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctcc 903

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 904  acgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacc 963

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||
Sbjct: 964  cgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgag 1023

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
                |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| 
Sbjct: 1024 gacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctctt 1083

                                                  
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            ||||| || || |||||||| |||||||||||||||||
Sbjct: 1084 cgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1121



 Score =  172 bits (87), Expect = 3e-39
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                       
Query: 86  agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 145
           |||||||||||||||||||||||||||| || |||||||| || || |||||||||||||
Sbjct: 65  agatggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcc 124

                                                                       
Query: 146 tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 205
           | ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 125 tggggaagaagctgaagaagcaggtgacatcggcggtgaactaccatggcaagagctcca 184

                          
Query: 206 aggccaacaggttca 220
           |   |||||||||||
Sbjct: 185 acatcaacaggttca 199



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 1461 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1520

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||||||||||||||||
Sbjct: 1521 gcgacgacggcagctgcctttacaccttttaagca 1555



 Score =  115 bits (58), Expect = 6e-22
 Identities = 175/214 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1138 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1197

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1198 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1257

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    |||  |||| |||| ||||| ||||| ||||||
Sbjct: 1258 gtcaagcgtgtgcagctggctgagcagtactcgagcgaggctgctcttggtgacgctaac 1317

                                              
Query: 1336 caggatgcgatgaagactggttccttctacggtt 1369
               || || |||||||||||||||||||||||||
Sbjct: 1318 tccgacgccatgaagactggttccttctacggtt 1351

---

>ref|NM_001075087.1| Oryza sativa (japonica cultivar-group) Os11g0707000 (Os11g0707000)
            mRNA, complete cds
          Length = 1711

 Score =  979 bits (494), Expect = 0.0
 Identities = 782/878 (89%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 240  gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 299

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 300  aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 359

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 360  ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 419

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 420  ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 479

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 480  ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 539

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 540  cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 599

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 600  atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 659

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 660  cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 719

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||
Sbjct: 720  gatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccag 779

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| || 
Sbjct: 780  atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccggg 839

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| 
Sbjct: 840  atgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctcc 899

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 900  acgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacc 959

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||
Sbjct: 960  cgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgag 1019

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
                |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| 
Sbjct: 1020 gacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctctt 1079

                                                  
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            ||||| || || |||||||| |||||||||||||||||
Sbjct: 1080 cgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1117



 Score =  172 bits (87), Expect = 3e-39
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                       
Query: 86  agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 145
           |||||||||||||||||||||||||||| || |||||||| || || |||||||||||||
Sbjct: 61  agatggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcc 120

                                                                       
Query: 146 tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 205
           | ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 121 tggggaagaagctgaagaagcaggtgacatcggcggtgaactaccatggcaagagctcca 180

                          
Query: 206 aggccaacaggttca 220
           |   |||||||||||
Sbjct: 181 acatcaacaggttca 195



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 1457 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1516

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||||||||||||||||
Sbjct: 1517 gcgacgacggcagctgcctttacaccttttaagca 1551



 Score =  123 bits (62), Expect = 2e-24
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1134 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1193

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1194 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1253

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1254 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1313

                                              
Query: 1336 caggatgcgatgaagactggttccttctacggtt 1369
               || || |||||||||||||||||||||||||
Sbjct: 1314 tccgacgccatgaagactggttccttctacggtt 1347

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  979 bits (494), Expect = 0.0
 Identities = 782/878 (89%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 204  gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 263

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 264  aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 323

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 324  ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 383

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 384  ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 443

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 444  ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 503

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 504  cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 563

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 564  atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 623

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 624  cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 683

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||
Sbjct: 684  gatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccag 743

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| || 
Sbjct: 744  atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccggg 803

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| 
Sbjct: 804  atgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctcc 863

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 864  acgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacc 923

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||
Sbjct: 924  cgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgag 983

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
                |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| 
Sbjct: 984  gacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctctt 1043

                                                  
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            ||||| || || |||||||| |||||||||||||||||
Sbjct: 1044 cgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1081



 Score =  172 bits (87), Expect = 3e-39
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                       
Query: 86  agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 145
           |||||||||||||||||||||||||||| || |||||||| || || |||||||||||||
Sbjct: 25  agatggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcc 84

                                                                       
Query: 146 tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 205
           | ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 85  tggggaagaagctgaagaagcaggtgacatcggcggtgaactaccatggcaagagctcca 144

                          
Query: 206 aggccaacaggttca 220
           |   |||||||||||
Sbjct: 145 acatcaacaggttca 159



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 1336 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1395

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||||||||||||||||
Sbjct: 1396 gcgacgacggcagctgcctttacaccttttaagca 1430



 Score =  119 bits (60), Expect = 4e-23
 Identities = 174/212 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1098 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1157

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1158 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1217

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1218 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1277

                                            
Query: 1336 caggatgcgatgaagactggttccttctacgg 1367
               || || |||||||||||||||||||||||
Sbjct: 1278 tccgacgccatgaagactggttccttctacgg 1309

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  979 bits (494), Expect = 0.0
 Identities = 782/878 (89%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 241  gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 300

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 301  aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 360

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 361  ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 420

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 421  ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 480

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 481  ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 540

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 541  cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 600

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 601  atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 660

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 661  cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 720

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||
Sbjct: 721  gatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccag 780

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| || 
Sbjct: 781  atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccggg 840

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| 
Sbjct: 841  atgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctcc 900

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 901  acgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacc 960

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||
Sbjct: 961  cgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgag 1020

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
                |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| 
Sbjct: 1021 gacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctctt 1080

                                                  
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            ||||| || || |||||||| |||||||||||||||||
Sbjct: 1081 cgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1118



 Score =  172 bits (87), Expect = 3e-39
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                       
Query: 86  agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 145
           |||||||||||||||||||||||||||| || |||||||| || || |||||||||||||
Sbjct: 62  agatggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcc 121

                                                                       
Query: 146 tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 205
           | ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 122 tggggaagaagctgaagaagcaggtgacatcggcggtgaactaccatggcaagagctcca 181

                          
Query: 206 aggccaacaggttca 220
           |   |||||||||||
Sbjct: 182 acatcaacaggttca 196



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 1458 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1517

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||||||||||||||||
Sbjct: 1518 gcgacgacggcagctgcctttacaccttttaagca 1552



 Score =  123 bits (62), Expect = 2e-24
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1135 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1194

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1195 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1254

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1255 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1314

                                              
Query: 1336 caggatgcgatgaagactggttccttctacggtt 1369
               || || |||||||||||||||||||||||||
Sbjct: 1315 tccgacgccatgaagactggttccttctacggtt 1348

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score =  979 bits (494), Expect = 0.0
 Identities = 782/878 (89%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 24   gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 83

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 84   aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 143

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 144  ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 203

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 204  ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 263

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 264  ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 323

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 324  cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 383

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 384  atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 443

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 444  cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 503

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||
Sbjct: 504  gatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccag 563

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| || 
Sbjct: 564  atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccggg 623

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| 
Sbjct: 624  atgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctcc 683

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 684  acgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacc 743

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||
Sbjct: 744  cgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgag 803

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
                |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| 
Sbjct: 804  gacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctctt 863

                                                  
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            ||||| || || |||||||| |||||||||||||||||
Sbjct: 864  cgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 901



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 1241 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1300

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||||||||||||||||
Sbjct: 1301 gcgacgacggcagctgcctttacaccttttaagca 1335



 Score =  123 bits (62), Expect = 2e-24
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 918  gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 977

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 978  aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1037

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1038 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1097

                                              
Query: 1336 caggatgcgatgaagactggttccttctacggtt 1369
               || || |||||||||||||||||||||||||
Sbjct: 1098 tccgacgccatgaagactggttccttctacggtt 1131

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  979 bits (494), Expect = 0.0
 Identities = 782/878 (89%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 245  gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 304

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 305  aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 364

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 365  ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 424

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 425  ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 484

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 485  ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 544

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 545  cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 604

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 605  atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 664

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 665  cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 724

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||
Sbjct: 725  gatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccag 784

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| || 
Sbjct: 785  atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccggg 844

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| 
Sbjct: 845  atgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctcc 904

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 905  acgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacc 964

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||
Sbjct: 965  cgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgag 1024

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
                |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| 
Sbjct: 1025 gacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctctt 1084

                                                  
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            ||||| || || |||||||| |||||||||||||||||
Sbjct: 1085 cgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1122



 Score =  165 bits (83), Expect = 7e-37
 Identities = 122/135 (90%)
 Strand = Plus / Plus

                                                                       
Query: 86  agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 145
           |||||||||||||||||||||||||||| || |||||||| || || |||||||||||||
Sbjct: 66  agatggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcc 125

                                                                       
Query: 146 tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 205
           | ||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 126 tggggaagaagctgaaaaagcaggtgacatcggcggtgaactaccatggcaagagctcca 185

                          
Query: 206 aggccaacaggttca 220
           |   |||||||||||
Sbjct: 186 acatcaacaggttca 200



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 1462 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1521

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||||||||||||||||
Sbjct: 1522 gcgacgacggcagctgcctttacaccttttaagca 1556



 Score =  123 bits (62), Expect = 2e-24
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1139 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1198

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1199 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1258

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1259 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1318

                                              
Query: 1336 caggatgcgatgaagactggttccttctacggtt 1369
               || || |||||||||||||||||||||||||
Sbjct: 1319 tccgacgccatgaagactggttccttctacggtt 1352

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  979 bits (494), Expect = 0.0
 Identities = 782/878 (89%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 239  gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 298

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 299  aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 358

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 359  ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 418

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 419  ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 478

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 479  ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 538

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 539  cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 598

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 599  atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 658

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 659  cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 718

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||
Sbjct: 719  gatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccag 778

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| || 
Sbjct: 779  atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccggg 838

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| 
Sbjct: 839  atgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctcc 898

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 899  acgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacc 958

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||
Sbjct: 959  cgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgag 1018

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
                |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| 
Sbjct: 1019 gacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctctt 1078

                                                  
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            ||||| || || |||||||| |||||||||||||||||
Sbjct: 1079 cgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1116



 Score =  172 bits (87), Expect = 3e-39
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                       
Query: 86  agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 145
           |||||||||||||||||||||||||||| || |||||||| || || |||||||||||||
Sbjct: 60  agatggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcc 119

                                                                       
Query: 146 tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 205
           | ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 120 tggggaagaagctgaagaagcaggtgacatcggcggtgaactaccatggcaagagctcca 179

                          
Query: 206 aggccaacaggttca 220
           |   |||||||||||
Sbjct: 180 acatcaacaggttca 194



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 1371 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1430

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||||||||||||||||
Sbjct: 1431 gcgacgacggcagctgcctttacaccttttaagca 1465



 Score =  119 bits (60), Expect = 4e-23
 Identities = 174/212 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1133 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1192

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1193 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1252

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1253 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1312

                                            
Query: 1336 caggatgcgatgaagactggttccttctacgg 1367
               || || |||||||||||||||||||||||
Sbjct: 1313 tccgacgccatgaagactggttccttctacgg 1344

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  971 bits (490), Expect = 0.0
 Identities = 781/878 (88%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 252  gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 311

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 312  aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 371

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 372  ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 431

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 432  ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 491

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||| |||||||||||| ||||||||| | |||||||||||||||||||||||
Sbjct: 492  ttcatgaccctccccaacatcaaggtcccactcaccctgggtatctggggaggcaagggt 551

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 552  cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 611

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 612  atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 671

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 672  cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 731

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||
Sbjct: 732  gatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccag 791

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| || 
Sbjct: 792  atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccggg 851

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| 
Sbjct: 852  atgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctcc 911

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 912  acgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacc 971

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||
Sbjct: 972  cgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgag 1031

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
                |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| 
Sbjct: 1032 gacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctctt 1091

                                                  
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            ||||| || || |||||||| |||||||||||||||||
Sbjct: 1092 cgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1129



 Score =  172 bits (87), Expect = 3e-39
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                       
Query: 86  agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 145
           |||||||||||||||||||||||||||| || |||||||| || || |||||||||||||
Sbjct: 73  agatggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcc 132

                                                                       
Query: 146 tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 205
           | ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 133 tggggaagaagctgaagaagcaggtgacatcggcggtgaactaccatggcaagagctcca 192

                          
Query: 206 aggccaacaggttca 220
           |   |||||||||||
Sbjct: 193 acatcaacaggttca 207



 Score =  123 bits (62), Expect = 2e-24
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1146 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1205

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1206 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1265

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1266 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1325

                                              
Query: 1336 caggatgcgatgaagactggttccttctacggtt 1369
               || || |||||||||||||||||||||||||
Sbjct: 1326 tccgacgccatgaagactggttccttctacggtt 1359



 Score =  117 bits (59), Expect = 1e-22
 Identities = 87/95 (91%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||| | |||||||||||| ||||
Sbjct: 1469 tgcctgtgccggaaggttgcaccgaccctgttgccaagaatt-cgacccaacggcgagga 1527

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||||||||||||||||
Sbjct: 1528 gcgacgacggcagctgcctttacaccttttaagca 1562

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  959 bits (484), Expect = 0.0
 Identities = 780/878 (88%), Gaps = 3/878 (0%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 212  gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 271

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 272  aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 331

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 332  ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 391

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            ||||||||||||||||| ||| |||||||||||||||| || |||||  ||||||| |||
Sbjct: 392  ggaggcttctacatcgccccttctttcatggacaagctcgtcgtccacatctccaagaac 451

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 452  ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 511

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 512  cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 571

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||||||||||||||| || |||   |||||||| |||||||| |||||||||
Sbjct: 572  atgagcgccggagagctggagagcggcaac---ggagagccggccaagctgatcaggcag 628

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 629  cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 688

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||
Sbjct: 689  gatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccag 748

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| || 
Sbjct: 749  atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccggg 808

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| 
Sbjct: 809  atgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctcc 868

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 869  acgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacc 928

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||
Sbjct: 929  cgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgag 988

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
                |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| 
Sbjct: 989  gacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctctt 1048

                                                  
Query: 1102 cgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            ||||| || || |||||||| |||||||||||||||||
Sbjct: 1049 cgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1086



 Score =  172 bits (87), Expect = 3e-39
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                       
Query: 86  agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 145
           |||||||||||||||||||||||||||| || |||||||| || || |||||||||||||
Sbjct: 33  agatggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcc 92

                                                                       
Query: 146 tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 205
           | ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 93  tggggaagaagctgaagaagcaggtgacatcggcggtgaactaccatggcaagagctcca 152

                          
Query: 206 aggccaacaggttca 220
           |   |||||||||||
Sbjct: 153 acatcaacaggttca 167



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 1426 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1485

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||||||||||||||||
Sbjct: 1486 gcgacgacggcagctgcctttacaccttttaagca 1520



 Score =  123 bits (62), Expect = 2e-24
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1103 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1162

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1163 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 1222

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1223 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1282

                                              
Query: 1336 caggatgcgatgaagactggttccttctacggtt 1369
               || || |||||||||||||||||||||||||
Sbjct: 1283 tccgacgccatgaagactggttccttctacggtt 1316

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
            precursor RNA, partial cds; nuclear gene for chloroplast
            product
          Length = 850

 Score =  908 bits (458), Expect = 0.0
 Identities = 521/542 (96%)
 Strand = Plus / Plus

                                                                        
Query: 877  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 936
            |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 1    gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60

                                                                        
Query: 937  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 996
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61   ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 120

                                                                        
Query: 997  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 1056
            |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 121  ggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatc 180

                                                                        
Query: 1057 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 1116
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181  gtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtac 240

                                                                        
Query: 1117 gacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctg 1176
            ||||| |||||||||||||||||   ||||||||| ||||||||||||||||||| ||||
Sbjct: 241  gacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctg 300

                                                                        
Query: 1177 gtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctg 1236
            ||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 301  gtgaactcgcgggacggaccagtgacctttgagcagccaaagatgacagtggagaagctg 360

                                                                        
Query: 1237 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 1296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 420

                                                                        
Query: 1297 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggt 1356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggt 480

                                                                        
Query: 1357 tccttctacggttagaaaattctccatacacacccaccatctcttgctgcataggaggag 1416
             |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  accttctacggttagaacattctccatacacacccaccatctcttgctgcataggaggag 540

              
Query: 1417 gt 1418
            ||
Sbjct: 541  gt 542



 Score =  250 bits (126), Expect = 2e-62
 Identities = 207/231 (89%), Gaps = 11/231 (4%)
 Strand = Plus / Plus

                                                                        
Query: 1590 aggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgc 1649
            ||||||||| |||||||||||||||||||| || |||| ||| ||||||||||| | |||
Sbjct: 539  aggtaaaggggcacagcaaggtactttgcctgtaccggcaggatgcaccgaccagactgc 598

                                                                        
Query: 1650 caagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagc 1709
            |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 599  caagaacttcgacccaacggcgaggagtgacgacggcagctgcctttacaccttttaagc 658

                                                                        
Query: 1710 atgccacttttaatatctgatgttttacc-----tacctaagt-ccgcatcgcatccaag 1763
            ||||||  ||||||||||||||||||| |     ||||||||| ||||||||||||||||
Sbjct: 659  atgcca-atttaatatctgatgttttatcctttgtacctaagtaccgcatcgcatccaag 717

                                                               
Query: 1764 cgattgctgggcatgttttgttaatatatctctaaatatattgagtatacc 1814
            ||||||||||||||||||||||||||||    |||| ||||||||||||||
Sbjct: 718  cgattgctgggcatgttttgttaatata----taaagatattgagtatacc 764

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  876 bits (442), Expect = 0.0
 Identities = 880/1026 (85%)
 Strand = Plus / Plus

                                                                        
Query: 267  gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 326
            |||||||||||| || ||||| |||||||| ||||||||||||||||| || ||||| ||
Sbjct: 217  gtggaagggtctcgcttacgacatctccgatgaccagcaggacatcacgagggggaaagg 276

                                                                        
Query: 327  catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 386
            |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| ||
Sbjct: 277  catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctgag 336

                                                                        
Query: 387  ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 446
            ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||
Sbjct: 337  ctcctacgagtacatcagccagggcctgcgcaagtacgacttcgacaacaccatggacgg 396

                                                                        
Query: 447  cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 506
              | |||||||| || || ||||||||||||||  | ||||| ||| |||| ||||||||
Sbjct: 397  gctgtacatcgccccggcgttcatggacaagctcatcgtccacctcgccaagaacttcat 456

                                                                        
Query: 507  gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 566
            ||| || |||||||||||| |||| |||||| |||||||||||||||||||||| || ||
Sbjct: 457  gacactccccaacatcaaggtccctctcatcctgggtatctggggaggcaagggacaggg 516

                                                                        
Query: 567  aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 626
             || || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 517  caagtcgttccagtgcgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 576

                                                                        
Query: 627  tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 686
             ||||||||||||||||| || ||||| || ||||| |||||||| ||| ||||| ||||
Sbjct: 577  cgccggagagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggta 636

                                                                        
Query: 687  ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 746
            ||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 637  ccgcgaggctgccgacattatcaagaagggcaagatgtgctgcctcttcatcaacgacct 696

                                                                        
Query: 747  tgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggt 806
             ||||| || |||||  |||||||||| || ||||||||||| || ||||||||||||||
Sbjct: 697  ggacgccggcgcggggcggatgggcgggacgacgcagtacacggtgaacaaccagatggt 756

                                                                        
Query: 807  gaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgta 866
            |||||||||||||||||||||||| || || ||||||||||||||| |||| || |||||
Sbjct: 757  gaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagttcccggggatgta 816

                                                                        
Query: 867  caacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgct 926
            |||||||||||||||||| || ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 817  caacaaggaggagaacccacgcgtgcccatcatcgtcaccggcaacgacttctcgacgct 876

                                                                        
Query: 927  ctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtga 986
             ||||| || || ||||| || || || |||||||||||||||||||| |||||||| ||
Sbjct: 877  gtacgcgcccctcatccgggacggccgcatggagaagttctactgggcgcccacccggga 936

                                                                        
Query: 987  cgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgt 1046
             ||||| ||||| || |||||||| |||||||  |||||||| |||   |||||| | ||
Sbjct: 937  ggaccgcatcggcgtgtgcaagggcatcttccgcaccgacaacgtccccgacgaggccgt 996

                                                                        
Query: 1047 cgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgc 1106
             || | | | || ||||||||||| || || ||||| ||||| ||||| || ||||| ||
Sbjct: 997  ggtgaggctggtggacaccttcccggggcagtccatcgacttcttcggcgcgctgcgggc 1056

                                                                        
Query: 1107 tcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattgg 1166
             |||||||||||||| |||||||||||||||||||||   | |||  ||||||||||   
Sbjct: 1057 gcgggtgtacgacgacgaggtgcgcaagtgggtcggcgagatcggcgtcgagaacatctc 1116

                                                                        
Query: 1167 caagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagt 1226
            |||| |||| || |||||  |||| |||||   ||| ||||| ||||| ||||||||  |
Sbjct: 1117 caagcggctcgtcaactccagggaggggccgccgacgttcgaccagcccaagatgaccat 1176

                                                                        
Query: 1227 cgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgt 1286
            |||||||||  | |||||||| |||||||| |||||||||||||| || || ||||| ||
Sbjct: 1177 cgagaagctcatggagtacggccacatgctggtccaggagcaggagaacgtgaagcgcgt 1236

                  
Query: 1287 gcagct 1292
            ||||||
Sbjct: 1237 gcagct 1242



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                       
Query: 87  gatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcct 146
           ||||||| |||| ||||| |||||||| || |||||||| || || ||||||| ||||||
Sbjct: 25  gatggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccaccttcct 84

                                  
Query: 147 cgggaagaagctcaagaagcagg 169
           |||||||||| | ||||||||||
Sbjct: 85  cgggaagaaggtgaagaagcagg 107

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  844 bits (426), Expect = 0.0
 Identities = 672/754 (89%)
 Strand = Plus / Plus

                                                                        
Query: 386  gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 445
            |||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||||||
Sbjct: 327  gctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatgggag 386

                                                                        
Query: 446  gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttca 505
            ||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||||||
Sbjct: 387  gcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaacttca 446

                                                                        
Query: 506  tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 565
            ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| |
Sbjct: 447  tgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtcagg 506

                                                                        
Query: 566  gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 625
            ||||||| |||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 507  gaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgatga 566

                                                                        
Query: 626  gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 685
            | ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||||||
Sbjct: 567  gcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggt 626

                                                                        
Query: 686  accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 745
            |||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 627  accgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatc 686

                                                                        
Query: 746  ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 805
            | ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||
Sbjct: 687  tggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatgg 746

                                                                        
Query: 806  tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 865
            ||||||||||||||||||||||||||||   ||| ||||||||||||||||| || ||||
Sbjct: 747  tgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgt 806

                                                                        
Query: 866  acaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgc 925
            ||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||
Sbjct: 807  acaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgc 866

                                                                        
Query: 926  tctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtg 985
            | ||||| || || |||||||| || |||||||||||||||||||||||||||||||| |
Sbjct: 867  tgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcg 926

                                                                        
Query: 986  acgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctg 1045
            |||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||    
Sbjct: 927  acgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggaca 986

                                                                        
Query: 1046 tcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtg 1105
            |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| ||||
Sbjct: 987  tcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtg 1046

                                              
Query: 1106 ctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            | || || |||||||| |||||||||||||||||
Sbjct: 1047 cccgtgtttacgacgacgaggtgcgcaagtgggt 1080



 Score =  172 bits (87), Expect = 3e-39
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                       
Query: 86  agatggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaacttcc 145
           |||||||||||||||||||||||||||| || |||||||| || || |||||||||||||
Sbjct: 61  agatggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcc 120

                                                                       
Query: 146 tcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctcca 205
           | ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 121 tggggaagaagctgaagaagcaggtgacatcggcggtgaactaccatggcaagagctcca 180

                          
Query: 206 aggccaacaggttca 220
           |   |||||||||||
Sbjct: 181 acatcaacaggttca 195



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 1420 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1479

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||||||||||||||||
Sbjct: 1480 gcgacgacggcagctgcctttacaccttttaagca 1514



 Score =  123 bits (62), Expect = 2e-24
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1097 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1156

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1157 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1216

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1217 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1276

                                              
Query: 1336 caggatgcgatgaagactggttccttctacggtt 1369
               || || |||||||||||||||||||||||||
Sbjct: 1277 tccgacgccatgaagactggttccttctacggtt 1310



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                       
Query: 262 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 240 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 299

                                        
Query: 322 aagggcatcgtggactcgctcttccaggc 350
           |||||  |||| ||||| || ||||||||
Sbjct: 300 aagggtttcgtcgactcccttttccaggc 328

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  831 bits (419), Expect = 0.0
 Identities = 763/877 (87%), Gaps = 3/877 (0%)
 Strand = Plus / Plus

                                                                        
Query: 267  gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 326
            |||||||||||| || ||||| ||||| ||||||||||||||||||||  | ||||| ||
Sbjct: 370  gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 429

                                                                        
Query: 327  catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 386
            |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| ||
Sbjct: 430  catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 489

                                                                        
Query: 387  ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 446
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 490  ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 549

                                                                        
Query: 447  cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 506
              | |||||||| || || ||||||||||||||  | ||||| ||| |||| ||||||||
Sbjct: 550  gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 609

                                                                        
Query: 507  gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 566
            ||| || |||||||||||| | || |||||| |||||||||||||||||||||| || ||
Sbjct: 610  gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 669

                                                                        
Query: 567  aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 626
             || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 670  caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 729

                                                                        
Query: 627  tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 686
             ||||| ||||||||||| || ||||   | ||||| |||||||| ||| ||||| ||||
Sbjct: 730  cgccggtgagctggagagcggcaacg---gcgagccggccaagctgatccggcagaggta 786

                                                                        
Query: 687  ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 746
            ||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| ||
Sbjct: 787  ccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacct 846

                                                                        
Query: 747  tgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggt 806
             ||||| || |||||  |||||||||| || ||||||||||| || ||||||||||||||
Sbjct: 847  ggacgccggcgcgggccggatgggcgggacgacgcagtacacggtgaacaaccagatggt 906

                                                                        
Query: 807  gaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgta 866
            |||||||||||||||||||||||| || || |||||||||||||||||||| || |||||
Sbjct: 907  gaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagctcccggggatgta 966

                                                                        
Query: 867  caacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgct 926
            ||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 967  caacaaggaggagaacccccgcgtgcccatcatcgtcaccggcaacgacttctcgacgct 1026

                                                                        
Query: 927  ctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtga 986
             |||||||| ||||||||||| || || |||||||||||||||||||| |||||||| ||
Sbjct: 1027 gtacgctcccctgatccgtgacgggcgcatggagaagttctactgggcgcccacccgcga 1086

                                                                        
Query: 987  cgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgt 1046
             ||||| ||||| || |||||||| |||||||  |||||||| |||   |||||| | ||
Sbjct: 1087 ggaccgcatcggcgtgtgcaagggcatcttccgcaccgacaacgtcccggacgaggccgt 1146

                                                                        
Query: 1047 cgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgc 1106
             || | | | || ||||||||||| || || ||||| ||||| ||||| || ||||| ||
Sbjct: 1147 ggtgaggctggtggacaccttcccggggcagtccatcgacttcttcggcgcgctgcgggc 1206

                                                 
Query: 1107 tcgggtgtacgacgatgaggtgcgcaagtgggtcggc 1143
             |||||||||||||| |||||||||||||||||||||
Sbjct: 1207 acgggtgtacgacgacgaggtgcgcaagtgggtcggc 1243



 Score = 81.8 bits (41), Expect = 8e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1204 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 1263
            ||||| ||||| ||||||||  | ||||||||  | |||||||| |||||||| ||||||
Sbjct: 1304 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 1363

                                         
Query: 1264 gagcaggacaatgtcaagcgtgtgcagct 1292
            |||||||| || |||||||||||||||||
Sbjct: 1364 gagcaggagaacgtcaagcgtgtgcagct 1392

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  698 bits (352), Expect = 0.0
 Identities = 718/840 (85%)
 Strand = Plus / Plus

                                                                        
Query: 298  gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 357
            |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| |
Sbjct: 235  gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 294

                                                                        
Query: 358  ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 417
            |||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || || 
Sbjct: 295  ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 354

                                                                        
Query: 418  aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 477
              || | |||| ||||||||| ||   || || ||||||||||| || ||||||||||||
Sbjct: 355  tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 414

                                                                        
Query: 478  cttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatc 537
            ||||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| 
Sbjct: 415  cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 474

                                                                        
Query: 538  ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 597
            |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 475  ttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgcc 534

                                                                        
Query: 598  aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 657
            |||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| |||
Sbjct: 535  aagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgga 594

                                                                        
Query: 658  gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 717
            ||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| 
Sbjct: 595  gagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaagggg 654

                                                                        
Query: 718  aagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacc 777
            ||||||||||||||||||||||||||||| || || ||||| ||  |||||||||| |||
Sbjct: 655  aagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcacc 714

                                                                        
Query: 778  acgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcc 837
            || |||||||||||||||||||||||||||||||||||||| ||||||||||||||   |
Sbjct: 715  acccagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaac 774

                                                                        
Query: 838  cccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 897
            ||||||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 775  cccaccaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccatc 834

                                                                        
Query: 898  gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 957
             |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||||
Sbjct: 835  atcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatg 894

                                                                        
Query: 958  gagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||||||||||||||||||| | || |||||  |||| |||||||  |||||||||
Sbjct: 895  gagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttc 954

                                                                        
Query: 1018 cagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaa 1077
              | ||||||| |||    | |||  |||| ||||| |||||||||||||||| || |||
Sbjct: 955  aggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaa 1014

                                                                        
Query: 1078 tccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 1137
            ||||||||||| |||||||| ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 1015 tccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 1074



 Score =  103 bits (52), Expect = 2e-18
 Identities = 166/204 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1168 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 1227
            ||||||||||||||||||| ||| |||||   ||| |||| |||||| ||||||||  | 
Sbjct: 1105 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1164

                                                                        
Query: 1228 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 1287
            || |||||||| ||||||||  | ||||| || ||||| ||||| || || ||| | |||
Sbjct: 1165 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1224

                                                                        
Query: 1288 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 1347
            ||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| ||||| 
Sbjct: 1225 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1284

                                    
Query: 1348 aagactggttccttctacggttag 1371
            |||||||| |||||||| ||||||
Sbjct: 1285 aagactggatccttctatggttag 1308



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1627 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 1686
            |||||||| |||||||  |||||||  |||| |||||| ||||| ||||||||||| |||
Sbjct: 1377 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1436

                          
Query: 1687 agctgcctttacac 1700
            |||||||| |||||
Sbjct: 1437 agctgcctgtacac 1450

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  698 bits (352), Expect = 0.0
 Identities = 718/840 (85%)
 Strand = Plus / Plus

                                                                        
Query: 298  gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 357
            |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| |
Sbjct: 98   gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 157

                                                                        
Query: 358  ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 417
            |||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || || 
Sbjct: 158  ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 217

                                                                        
Query: 418  aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 477
              || | |||| ||||||||| ||   || || ||||||||||| || ||||||||||||
Sbjct: 218  tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 277

                                                                        
Query: 478  cttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatc 537
            ||||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| 
Sbjct: 278  cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 337

                                                                        
Query: 538  ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 597
            |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 338  ttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgcc 397

                                                                        
Query: 598  aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 657
            |||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| |||
Sbjct: 398  aagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgga 457

                                                                        
Query: 658  gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 717
            ||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| 
Sbjct: 458  gagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaagggg 517

                                                                        
Query: 718  aagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacc 777
            ||||||||||||||||||||||||||||| || || ||||| ||  |||||||||| |||
Sbjct: 518  aagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcacc 577

                                                                        
Query: 778  acgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcc 837
            || |||||||||||||||||||||||||||||||||||||| ||||||||||||||   |
Sbjct: 578  acccagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaac 637

                                                                        
Query: 838  cccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 897
            ||||||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 638  cccaccaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccatc 697

                                                                        
Query: 898  gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 957
             |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||||
Sbjct: 698  atcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatg 757

                                                                        
Query: 958  gagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||||||||||||||||||| | || |||||  |||| |||||||  |||||||||
Sbjct: 758  gagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttc 817

                                                                        
Query: 1018 cagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaa 1077
              | ||||||| |||    | |||  |||| ||||| |||||||||||||||| || |||
Sbjct: 818  aggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaa 877

                                                                        
Query: 1078 tccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 1137
            ||||||||||| |||||||| ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 878  tccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 937



 Score = 97.6 bits (49), Expect = 1e-16
 Identities = 160/197 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1168 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 1227
            ||||||||||||||||||| ||| |||||   ||| |||| |||||| ||||||||  | 
Sbjct: 968  aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1027

                                                                        
Query: 1228 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 1287
            || |||||||| ||||||||  | ||||| || ||||| ||||| || || ||| | |||
Sbjct: 1028 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1087

                                                                        
Query: 1288 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 1347
            ||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| ||||| 
Sbjct: 1088 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1147

                             
Query: 1348 aagactggttccttcta 1364
            |||||||| ||||||||
Sbjct: 1148 aagactggatccttcta 1164



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1627 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 1686
            |||||||| |||||||  |||||||  |||| |||||| ||||| ||||||||||| |||
Sbjct: 1202 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1261

                          
Query: 1687 agctgcctttacac 1700
            |||||||| |||||
Sbjct: 1262 agctgcctgtacac 1275

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  698 bits (352), Expect = 0.0
 Identities = 718/840 (85%)
 Strand = Plus / Plus

                                                                        
Query: 298  gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 357
            |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| |
Sbjct: 128  gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 187

                                                                        
Query: 358  ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 417
            |||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || || 
Sbjct: 188  ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 247

                                                                        
Query: 418  aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 477
              || | |||| ||||||||| ||   || || ||||||||||| || ||||||||||||
Sbjct: 248  tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 307

                                                                        
Query: 478  cttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatc 537
            ||||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| 
Sbjct: 308  cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 367

                                                                        
Query: 538  ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 597
            |||||||||||||||||||| ||||| || ||||| ||||| ||||| ||||||||||||
Sbjct: 368  ttgggtatctggggaggcaaaggtcaggggaaatccttccaatgtgaacttgtgttcgcc 427

                                                                        
Query: 598  aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 657
            |||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| |||
Sbjct: 428  aagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgga 487

                                                                        
Query: 658  gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 717
            ||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| 
Sbjct: 488  gagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaagggg 547

                                                                        
Query: 718  aagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacc 777
            ||||||||||||||||||||||||||||| || || ||||| ||  |||||||||| |||
Sbjct: 548  aagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcacc 607

                                                                        
Query: 778  acgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcc 837
            || |||||||||||||||||||||||||||||||||||||| ||||||||||||||   |
Sbjct: 608  acccagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaac 667

                                                                        
Query: 838  cccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 897
            ||||||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||||
Sbjct: 668  cccaccaacgtccagctccccggcatgtacaacaagcaggagaacccccgcgtgcccatc 727

                                                                        
Query: 898  gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 957
             |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||||
Sbjct: 728  atcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatg 787

                                                                        
Query: 958  gagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||||||||||||||||||| | || |||||  |||| |||||||  |||||||||
Sbjct: 788  gagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttc 847

                                                                        
Query: 1018 cagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaa 1077
              | ||||||| |||    | |||  |||| ||||| |||||||||||||||| || |||
Sbjct: 848  aggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaa 907

                                                                        
Query: 1078 tccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 1137
            ||||||||||| |||||||| ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 908  tccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 967



 Score =  119 bits (60), Expect = 4e-23
 Identities = 165/200 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1165 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 1224
            |||||||||||||||||||||| ||| |||||   ||| |||| |||||| |||||||| 
Sbjct: 995  ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 1054

                                                                        
Query: 1225 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 1284
             | || |||||||| ||||||||  ||||||| || ||||||||||| || || ||| | 
Sbjct: 1055 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 1114

                                                                        
Query: 1285 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 1344
            |||||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| |||
Sbjct: 1115 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 1174

                                
Query: 1345 atgaagactggttccttcta 1364
            || |||||||| ||||||||
Sbjct: 1175 atcaagactggatccttcta 1194



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1627 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 1686
            |||||||| |||||||  |||||||  |||| |||||| ||||| ||||||||||| |||
Sbjct: 1232 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1291

                          
Query: 1687 agctgcctttacac 1700
            |||||||| |||||
Sbjct: 1292 agctgcctgtacac 1305

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  654 bits (330), Expect = 0.0
 Identities = 732/866 (84%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || 
Sbjct: 213  gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccaggggc 272

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||| |||| |||   |||||||||||||| | ||| |||||||||||||  ||||| 
Sbjct: 273  aagggcctcgtcgacaacctcttccaggcgcctatgggggacggcacccacgtcgccgtg 332

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||| ||| ||||||||||||    |   ||| ||||||||||||  |||
Sbjct: 333  ctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgatg 392

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            |  ||||||||||| ||    |  |||||||||||||| || ||||| |||||||| |||
Sbjct: 393  gatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaac 452

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            |||||||||||||| ||||||||| | || |||||| ||||||||||||||||||| || 
Sbjct: 453  ttcatgaccctgccaaacatcaaggttcccctcatcctgggtatctggggaggcaaaggc 512

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| ||||| || ||||| || ||||||||||||||||||| ||||||||||
Sbjct: 513  cagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcacccccatcatg 572

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||| ||||||||||| || ||||| |||||||| ||||||||||||||||||
Sbjct: 573  atgagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggcag 632

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            || |||||||||||  | ||| | ||||||||||| ||||||| ||||||||||||||||
Sbjct: 633  cgctaccgtgaggcctccgacctcatcaagaagggcaagatgtcctgcctcttcatcaac 692

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||  | ||||| || |||||| | |||||||| ||||| |||||||| || |||||||||
Sbjct: 693  gacttggacgccggcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccag 752

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||| ||||||||||||||||||||||||||   ||||||||||||||||||||| || 
Sbjct: 753  atggtcaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccgggg 812

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| |||||||| ||||||||| |||||||||| ||||| ||||| 
Sbjct: 813  atgtacaacaaggaggacaacccccgcgtgcccatcatcgtcaccggcaacgacttctcc 872

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||||||||| || || ||||| || || || |||||||||||||||||||| ||||||
Sbjct: 873  acgctctacgcgccgctcatccgcgacggccgcatggagaagttctactgggcgcccacc 932

                                                                        
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgag 1041
            || || ||||| ||||| ||||||||||| |||||||  ||||||   |||   || |||
Sbjct: 933  cgcgaggaccgcatcggcgtctgcaagggcatcttccgcaccgacggcgtcgacgaggag 992

                                                                        
Query: 1042 tctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
               |||||| || | |||||||||||||| || || ||||| || || ||||| || |||
Sbjct: 993  cacgtcgtccagctggtcgacaccttccctggccagtccatcgatttcttcggcgcgctg 1052

                                      
Query: 1102 cgtgctcgggtgtacgacgatgaggt 1127
            ||||| ||||| |||||||| |||||
Sbjct: 1053 cgtgcccgggtctacgacgacgaggt 1078



 Score = 95.6 bits (48), Expect = 5e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1204 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 1263
            ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214

                                                                        
Query: 1264 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 1323
            |||||||| || |||||||||||||||||||||||||  ||| | | | |||| ||||| 
Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274

                                                    
Query: 1324 ggtgatgctaaccaggatgcgatgaagactggttccttct 1363
            ||||| || ||| |||| || ||||||||||| |||||||
Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314



 Score = 91.7 bits (46), Expect = 8e-15
 Identities = 107/127 (84%), Gaps = 9/127 (7%)
 Strand = Plus / Plus

                                                                       
Query: 88  atggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaa------c 141
           ||||| || |||||||||||||||||||| |||||||| || || |||||||       |
Sbjct: 21  atggcggccgccttctcctccaccgtcggagctccggcctccaccccgaccaggagcagc 80

                                                                       
Query: 142 ttcctcgggaagaagctcaagaagc---aggtgacctcggccgtgaactaccatggcaag 198
           |||||||||||||||||||| ||||   ||||| || ||||||||| |||||||||||||
Sbjct: 81  ttcctcgggaagaagctcaacaagccgcaggtgtccgcggccgtgacctaccatggcaag 140

                  
Query: 199 agctcca 205
           |||||||
Sbjct: 141 agctcca 147

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  632 bits (319), Expect = e-177
 Identities = 595/687 (86%)
 Strand = Plus / Plus

                                                                        
Query: 451  tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 510
            ||||||||||| || ||||||||||||||||| || ||  || |||| |||||||||| |
Sbjct: 87   tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 146

                                                                        
Query: 511  ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 570
             |||||||||||||||| || ||||| |||||||||||||||||||| ||||| || |||
Sbjct: 147  ttgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaggggaaa 206

                                                                        
Query: 571  tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 630
            || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 207  tccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgcc 266

                                                                        
Query: 631  ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 690
            || ||||||||||| || ||||| |||||||| || ||||| ||| ||||||||||||||
Sbjct: 267  ggtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgt 326

                                                                        
Query: 691  gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 750
            ||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || 
Sbjct: 327  gaggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgat 386

                                                                        
Query: 751  gctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaac 810
            || ||||| ||  |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 387  gccggtgccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaac 446

                                                                        
Query: 811  gccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 870
            |||||||| ||||||||||||||   |||||||||||| |||||||| ||||||||||||
Sbjct: 447  gccaccctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaac 506

                                                                        
Query: 871  aaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctac 930
            ||| ||||||||||||| ||||||||| |||||||||| ||||| ||||| || ||||||
Sbjct: 507  aagcaggagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctac 566

                                                                        
Query: 931  gctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgac 990
            || || || |||||||| ||||||||||||||||||||||||||||||||| | || |||
Sbjct: 567  gcccccctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgac 626

                                                                        
Query: 991  cgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtc 1050
            ||  |||| |||||||  |||||||||  | ||||||| |||    | |||  |||| ||
Sbjct: 627  cgggtcggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatc 686

                                                                        
Query: 1051 aagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgg 1110
            ||| |||||||||||||||| || |||||||||||||| |||||||| ||| | ||  ||
Sbjct: 687  aagctcgtcgacaccttccccggccaatccattgacttcttcggtgcactgagggcgagg 746

                                       
Query: 1111 gtgtacgacgatgaggtgcgcaagtgg 1137
            || |||||||| |||||| | ||||||
Sbjct: 747  gtctacgacgacgaggtgaggaagtgg 773



 Score =  125 bits (63), Expect = 6e-25
 Identities = 171/207 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1165 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 1224
            |||||||||||||||||||||| ||| |||||   ||| |||| |||||| |||||||| 
Sbjct: 801  ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 860

                                                                        
Query: 1225 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 1284
             | || |||||||| ||||||||  ||||||| || ||||||||||| || || ||| | 
Sbjct: 861  ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 920

                                                                        
Query: 1285 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 1344
            |||||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| |||
Sbjct: 921  gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 980

                                       
Query: 1345 atgaagactggttccttctacggttag 1371
            || |||||||| |||||||| ||||||
Sbjct: 981  atcaagactggatccttctatggttag 1007



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1627 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 1686
            |||||||| |||||||  |||||||  |||| |||||| ||||| ||||||||||| |||
Sbjct: 1076 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1135

                          
Query: 1687 agctgcctttacac 1700
            |||||||| |||||
Sbjct: 1136 agctgcctgtacac 1149

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
            precursor, mRNA, partial cds
          Length = 1336

 Score =  575 bits (290), Expect = e-160
 Identities = 569/662 (85%)
 Strand = Plus / Plus

                                                                        
Query: 466  ttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 525
            |||||||||||||| || ||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 22   ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 81

                                                                        
Query: 526  atcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgag 585
             | || |||||| ||||||||||||||||||| || || |||||||| ||||| || |||
Sbjct: 82   gttcccctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgag 141

                                                                        
Query: 586  cttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagt 645
            || || ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| 
Sbjct: 142  ctggtcttcgccaagatgggcatcacccccatcatgatgagcgccggcgagctggagagc 201

                                                                        
Query: 646  gggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatg 705
            || ||||| |||||||| |||||||||||||||||||| |||||||||||  | ||| | 
Sbjct: 202  ggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctccgacctc 261

                                                                        
Query: 706  atcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtagg 765
            ||||||||||| ||||||| ||||||||||||||||||  | ||||| || |||||| | 
Sbjct: 262  atcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgccggcgcgggtcgc 321

                                                                        
Query: 766  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 825
            |||||||| ||||| |||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 322  atgggcggcaccacccagtacacggtgaacaaccagatggtcaacgccaccctgatgaac 381

                                                                        
Query: 826  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 885
            ||||||||   ||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 382  atcgccgacaaccccaccaacgtgcagctcccggggatgtacaacaaggaggacaacccc 441

                                                                        
Query: 886  cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 945
            || ||||||||| |||||||||| ||||| ||||| ||||||||||| || || ||||| 
Sbjct: 442  cgcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgc 501

                                                                        
Query: 946  gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 1005
            || || || |||||||||||||||||||| |||||||| || ||||| ||||| ||||||
Sbjct: 502  gacggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgc 561

                                                                        
Query: 1006 aagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacc 1065
            ||||| |||||||  ||||||   |||   || |||   |||||| || | |||||||||
Sbjct: 562  aagggcatcttccgcaccgacggcgtcgacgaggagcacgtcgtccagctggtcgacacc 621

                                                                        
Query: 1066 ttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgag 1125
            ||||| || || ||||| ||||| ||||| || |||||||| ||||| |||||||| |||
Sbjct: 622  ttccctggccagtccatcgacttcttcggcgcgctgcgtgcccgggtctacgacgacgag 681

              
Query: 1126 gt 1127
            ||
Sbjct: 682  gt 683



 Score = 95.6 bits (48), Expect = 5e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1204 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 1263
            ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 760  ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 819

                                                                        
Query: 1264 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 1323
            |||||||| || |||||||||||||||||||||||||  ||| | | | |||| ||||| 
Sbjct: 820  gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 879

                                                    
Query: 1324 ggtgatgctaaccaggatgcgatgaagactggttccttct 1363
            ||||| || ||| |||| || ||||||||||| |||||||
Sbjct: 880  ggtgaagccaacgaggacgccatgaagactggctccttct 919

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  563 bits (284), Expect = e-157
 Identities = 635/757 (83%)
 Strand = Plus / Plus

                                                                        
Query: 262  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
            |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || 
Sbjct: 213  gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccaggggc 272

                                                                        
Query: 322  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
            |||||| |||| |||   |||||||||||||| |      ||||||||||||  ||||| 
Sbjct: 273  aagggcctcgtcgacaacctcttccaggcgcctatnnnnnacggcacccacgtcgccgtg 332

                                                                        
Query: 382  ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 441
            |||||||||||||| ||| ||||||||||||    |   ||| ||||||||||||  |||
Sbjct: 333  ctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgatg 392

                                                                        
Query: 442  ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 501
            |  ||||||||||| ||    |  |||||||||||||| || ||||| |||||||| |||
Sbjct: 393  gatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaac 452

                                                                        
Query: 502  ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 561
            |||||||||||||| ||||||||| | || |||||| ||||||||  ||||||||| || 
Sbjct: 453  ttcatgaccctgccaaacatcaaggttcccctcatcctgggtatcgtgggaggcaaaggc 512

                                                                        
Query: 562  caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 621
            || |||||||| ||||| || ||||| || |||||||||||||||||||     ||||||
Sbjct: 513  cagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcannnnnatcatg 572

                                                                        
Query: 622  atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 681
            ||||| ||||| ||||||||||| || ||||| |||||||| ||||||||||||||||||
Sbjct: 573  atgagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggcag 632

                                                                        
Query: 682  cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 741
            || |||||||||||  | ||| | ||||||||||| ||||||||||||||||||||||||
Sbjct: 633  cgctaccgtgaggcctccgacctcatcaagaagggcaagatgtgctgcctcttcatcaac 692

                                                                        
Query: 742  gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 801
            ||  | ||||| || |||||| | |||||||| ||||| |||||||| || |||||||||
Sbjct: 693  gacttggacgccggcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccag 752

                                                                        
Query: 802  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 861
            ||||| ||||||||||||||||||||||||||   ||||||||||||||||||||| || 
Sbjct: 753  atggtcaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccgggg 812

                                                                        
Query: 862  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 921
            ||||||||||||||||| ||     | ||||||||| |||||||||| ||||| ||||| 
Sbjct: 813  atgtacaacaaggaggacaannnnngcgtgcccatcatcgtcaccggcaacgacttctcc 872

                                                                        
Query: 922  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 981
            ||||||||||| || || ||||| || || || |||||||||||||||||||| ||||||
Sbjct: 873  acgctctacgcgccgctcatccgcgacggccgcatggagaagttctactgggcgcccacc 932

                                                 
Query: 982  cgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            || || ||||| ||||| ||||||||||| |||||||
Sbjct: 933  cgcgaggaccgcatcggcgtctgcaagggcatcttcc 969



 Score = 95.6 bits (48), Expect = 5e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1204 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 1263
            ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214

                                                                        
Query: 1264 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 1323
            |||||||| || |||||||||||||||||||||||||  ||| | | | |||| ||||| 
Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274

                                                    
Query: 1324 ggtgatgctaaccaggatgcgatgaagactggttccttct 1363
            ||||| || ||| |||| || ||||||||||| |||||||
Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314



 Score = 91.7 bits (46), Expect = 8e-15
 Identities = 107/127 (84%), Gaps = 9/127 (7%)
 Strand = Plus / Plus

                                                                       
Query: 88  atggctgctgccttctcctccaccgtcggggctccggcttctacgccgaccaa------c 141
           ||||| || |||||||||||||||||||| |||||||| || || |||||||       |
Sbjct: 21  atggcggccgccttctcctccaccgtcggagctccggcctccaccccgaccaggagcagc 80

                                                                       
Query: 142 ttcctcgggaagaagctcaagaagc---aggtgacctcggccgtgaactaccatggcaag 198
           |||||||||||||||||||| ||||   ||||| || ||||||||| |||||||||||||
Sbjct: 81  ttcctcgggaagaagctcaacaagccgcaggtgtccgcggccgtgacctaccatggcaag 140

                  
Query: 199 agctcca 205
           |||||||
Sbjct: 141 agctcca 147

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) (RCA) mRNA, complete cds
          Length = 1815

 Score =  545 bits (275), Expect = e-151
 Identities = 548/639 (85%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 438
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 496  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555

                                                                        
Query: 439  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 498
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 556  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 558
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 616  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675

                                                                        
Query: 559  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 618
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 676  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 736  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 795

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 796  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 855

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 856  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 915

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| 
Sbjct: 916  cagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccca 975

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||||||
Sbjct: 976  ggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttc 1035

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || || || ||||||||||| ||||||||||| ||||||||||||||||||||||| || 
Sbjct: 1036 tccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccg 1095

                                                   
Query: 979  acccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1096 acccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) (RCA) mRNA, complete cds
          Length = 1928

 Score =  545 bits (275), Expect = e-151
 Identities = 548/639 (85%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 438
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 496  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555

                                                                        
Query: 439  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 498
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 556  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 558
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 616  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675

                                                                        
Query: 559  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 618
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 676  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 736  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 795

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 796  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 855

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 856  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 915

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| 
Sbjct: 916  cagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccca 975

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||||||
Sbjct: 976  ggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttc 1035

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || || || ||||||||||| ||||||||||| ||||||||||||||||||||||| || 
Sbjct: 1036 tccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccg 1095

                                                   
Query: 979  acccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1096 acccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) (RCA) mRNA, complete cds
          Length = 1833

 Score =  545 bits (275), Expect = e-151
 Identities = 548/639 (85%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 438
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 525  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584

                                                                        
Query: 439  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 498
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 585  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 558
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 645  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704

                                                                        
Query: 559  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 618
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 705  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 765  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 824

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 825  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 884

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 885  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 944

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| 
Sbjct: 945  cagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccca 1004

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||||||
Sbjct: 1005 ggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttc 1064

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || || || ||||||||||| ||||||||||| ||||||||||||||||||||||| || 
Sbjct: 1065 tccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccg 1124

                                                   
Query: 979  acccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1125 acccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  545 bits (275), Expect = e-151
 Identities = 548/639 (85%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 438
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 407  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466

                                                                        
Query: 439  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 498
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 467  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 558
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 527  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586

                                                                        
Query: 559  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 618
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 587  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 647  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 706

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 707  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 766

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 767  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 826

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| 
Sbjct: 827  cagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccca 886

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||||||
Sbjct: 887  ggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttc 946

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || || || ||||||||||| ||||||||||| ||||||||||||||||||||||| || 
Sbjct: 947  tccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccg 1006

                                                   
Query: 979  acccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1007 acccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  545 bits (275), Expect = e-151
 Identities = 548/639 (85%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 438
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 410  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469

                                                                        
Query: 439  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 498
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 470  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 558
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 530  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589

                                                                        
Query: 559  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 618
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 590  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 650  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 709

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 710  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 769

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 770  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 829

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| 
Sbjct: 830  cagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccca 889

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||||||
Sbjct: 890  ggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttc 949

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || || || ||||||||||| ||||||||||| ||||||||||||||||||||||| || 
Sbjct: 950  tccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccg 1009

                                                   
Query: 979  acccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1010 acccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  545 bits (275), Expect = e-151
 Identities = 548/639 (85%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 438
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 407  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466

                                                                        
Query: 439  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 498
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 467  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 558
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 527  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586

                                                                        
Query: 559  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 618
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 587  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 647  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 706

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 707  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 766

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 767  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 826

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| 
Sbjct: 827  cagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccca 886

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||||||
Sbjct: 887  ggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttc 946

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || || || ||||||||||| ||||||||||| ||||||||||||||||||||||| || 
Sbjct: 947  tccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccg 1006

                                                   
Query: 979  acccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1007 acccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  545 bits (275), Expect = e-151
 Identities = 548/639 (85%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 438
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 410  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469

                                                                        
Query: 439  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 498
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 470  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 558
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 530  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589

                                                                        
Query: 559  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 618
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 590  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 650  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 709

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 710  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 769

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 770  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 829

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| 
Sbjct: 830  cagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccca 889

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||||||
Sbjct: 890  ggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttc 949

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || || || ||||||||||| ||||||||||| ||||||||||||||||||||||| || 
Sbjct: 950  tccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccg 1009

                                                   
Query: 979  acccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1010 acccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
            complete cds
          Length = 1425

 Score =  537 bits (271), Expect = e-149
 Identities = 547/639 (85%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 438
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 322  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 381

                                                                        
Query: 439  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 498
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 382  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 441

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 558
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 442  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 501

                                                                        
Query: 559  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 618
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 502  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 561

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 562  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 621

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||| |||||
Sbjct: 622  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcctcatc 681

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 682  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 741

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| 
Sbjct: 742  cagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccca 801

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||||||
Sbjct: 802  ggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttc 861

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || || || ||||||||||| ||||||||||| ||||||||||||||||||||||| || 
Sbjct: 862  tccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccg 921

                                                   
Query: 979  acccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||| ||||||||||||||||||||||||||||||
Sbjct: 922  acccgtgaagaccgtatcggtgtctgcaagggtatcttc 960

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  537 bits (271), Expect = e-149
 Identities = 547/639 (85%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 438
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 399  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 458

                                                                        
Query: 439  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 498
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 459  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 518

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 558
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 519  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 578

                                                                        
Query: 559  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 618
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 579  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 638

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 639  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 698

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 699  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 758

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 759  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 818

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||| || 
Sbjct: 819  cagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagcttcca 878

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||||||
Sbjct: 879  ggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttc 938

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || || || ||||||||||| ||||||||||| ||||||||||||||||||||||| || 
Sbjct: 939  tccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccg 998

                                                   
Query: 979  acccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||| ||||||||||||||||||||||||||||||
Sbjct: 999  acccgtgaagaccgtatcggtgtctgcaagggtatcttc 1037

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  537 bits (271), Expect = e-149
 Identities = 547/639 (85%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 438
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 525  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584

                                                                        
Query: 439  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 498
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 585  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 558
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 645  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704

                                                                        
Query: 559  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 618
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 705  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 765  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 824

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 825  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 884

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||| 
Sbjct: 885  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaat 944

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| 
Sbjct: 945  cagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccca 1004

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||||||
Sbjct: 1005 ggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttc 1064

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || || || ||||||||||| ||||||||||| ||||||||||||||||||||||| || 
Sbjct: 1065 tccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccg 1124

                                                   
Query: 979  acccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1125 acccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score =  531 bits (268), Expect = e-147
 Identities = 640/764 (83%)
 Strand = Plus / Plus

                                                                        
Query: 268  tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggc 327
            |||||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| || 
Sbjct: 280  tggaagggtcttgcttatgatatctccgatgaccaacaagacattaccagagggaaaggt 339

                                                                        
Query: 328  atcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagc 387
            || || |||||  | ||||| || |||| |  ||| || || ||| | || ||| | |||
Sbjct: 340  atggtcgactcattgttccaagctcccatgaacgatggtactcactatgctgtcatgagc 399

                                                                        
Query: 388  tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 447
            ||||| |||||| | ||||| ||||| || |  |||||||| ||||||| |||||  || 
Sbjct: 400  tcctatgagtacattagccaaggccttcgcacatacgacttggacaacaacatggatgga 459

                                                                        
Query: 448  ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 507
            |||||||| || || ||||||||||||||||||||||| ||  || |||| |||| ||||
Sbjct: 460  ttctacattgccccagctttcatggacaagcttgttgttcacatcaccaagaactacatg 519

                                                                        
Query: 508  accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 567
            ||||| || ||||| ||| | || || ||||||||||| ||||||||||| |||||||||
Sbjct: 520  acccttcctaacattaaggttcctcttatcttgggtatttggggaggcaaaggtcaagga 579

                                                                        
Query: 568  aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 627
            ||||| ||||| ||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 580  aaatctttccaatgtgagcttgtctttgccaagatgggaatcaaccccattatgatgagt 639

                                                                        
Query: 628  gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 687
            ||||||||  |||| ||||||||||| ||||| ||||||||| | ||||||||  |||||
Sbjct: 640  gccggagaattggaaagtgggaacgccggagaaccagccaagttgatcaggcaaaggtac 699

                                                                        
Query: 688  cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 747
            |||||||| || ||||| |||||||| || || ||||| |||||||| ||||||||||| 
Sbjct: 700  cgtgaggccgccgacattatcaagaaagggaaaatgtgttgcctctttatcaacgatctc 759

                                                                        
Query: 748  gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 807
            |||||||| || ||| | ||||| |||||||| || ||||| || |||||||| ||||||
Sbjct: 760  gacgctggagccggtcgtatgggaggaaccacacaatacacagtgaacaaccaaatggtg 819

                                                                        
Query: 808  aacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtac 867
            |||||||| || ||||||||||| |||  |||||||||||| |||||||| || ||||||
Sbjct: 820  aacgccacactcatgaacatcgctgataaccccaccaacgttcagctccccggtatgtac 879

                                                                        
Query: 868  aacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctc 927
            |||||||| |||||||| ||||| || ||| | |||||||||||||||||||||||||| 
Sbjct: 880  aacaaggaagagaaccctcgtgttccgatcattgtcaccggtaacgatttctcgacgctg 939

                                                                        
Query: 928  tacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgac 987
            ||||| || || |||||||| ||||||||||||||||| |||||||| |||||| | || 
Sbjct: 940  tacgcgccgctcatccgtgacggtcgtatggagaagttttactgggcacccaccagggaa 999

                                                        
Query: 988  gaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 1031
            ||  | |||||||| ||||  ||||| |||  ||||||||||||
Sbjct: 1000 gataggatcggtgtttgcacaggtattttcaggaccgacaatgt 1043



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                      
Query: 1060 gacaccttcccaggacaatccattgactttttcggtgctctg 1101
            ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113

---

>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase
            (rba1 gene)
          Length = 321

 Score =  521 bits (263), Expect = e-144
 Identities = 296/307 (96%)
 Strand = Plus / Plus

                                                                        
Query: 1084 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 1143
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |
Sbjct: 2    gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61

                                                                        
Query: 1144 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 1203
            |||||||| ||||||||||||||||||| ||| ||||||||||||||||| || ||||||
Sbjct: 62   tctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggacggaccagtgacc 121

                                                                        
Query: 1204 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 1263
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  tttgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 181

                                                                        
Query: 1264 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 1323
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 241

                                                                        
Query: 1324 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 1383
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 242  ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaacattctccat 301

                   
Query: 1384 acacacc 1390
            |||||||
Sbjct: 302  acacacc 308

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  513 bits (259), Expect = e-142
 Identities = 418/471 (88%)
 Strand = Plus / Minus

                                                                          
Query: 612    ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
              ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||
Sbjct: 109158 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 109099

                                                                          
Query: 672    catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
               ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 109098 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 109039

                                                                          
Query: 732    cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
              ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| ||
Sbjct: 109038 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 108979

                                                                          
Query: 792    caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
               |||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||
Sbjct: 108978 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgca 108919

                                                                          
Query: 852    gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
              |||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||
Sbjct: 108918 gctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaa 108859

                                                                          
Query: 912    cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
              ||| ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||
Sbjct: 108858 cgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactg 108799

                                                                          
Query: 972    ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 1031
              |||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| ||
Sbjct: 108798 ggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgt 108739

                                                                 
Query: 1032   cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 1082
              |   ||||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 108738 ccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 108688



 Score =  270 bits (136), Expect = 2e-68
 Identities = 178/192 (92%)
 Strand = Plus / Minus

                                                                          
Query: 420    gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 479
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 109435 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 109376

                                                                          
Query: 480    tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 539
               || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 109375 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 109316

                                                                          
Query: 540    gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 599
              |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 109315 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 109256

                          
Query: 600    gatgggcatcaa 611
              |||||| |||||
Sbjct: 109255 gatggggatcaa 109244



 Score =  176 bits (89), Expect = 2e-40
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                          
Query: 262    gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
              |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 109706 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 109647

                                                                          
Query: 322    aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
              |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 109646 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 109587

                                           
Query: 382    ctcagctcctacgagtacgtcagccaggg 410
              |||||||||||||||||| ||||||||||
Sbjct: 109586 ctcagctcctacgagtacctcagccaggg 109558



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                          
Query: 1616   tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
              |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 107252 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 107193

                                                 
Query: 1676   gcgacgacggcagctgcctttacaccttttaagca 1710
              |||||||||||||||||||||||||||||||||||
Sbjct: 107192 gcgacgacggcagctgcctttacaccttttaagca 107158



 Score =  129 bits (65), Expect = 4e-26
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                          
Query: 1156   gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
              |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 108522 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 108463

                                                                          
Query: 1216   aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
              ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 108462 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 108403

                                                                          
Query: 1276   gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
              ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 108402 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 108343

                                                   
Query: 1336   caggatgcgatgaagactggttccttctacggttaga 1372
                 || || ||||||||||||||||||||||||||||
Sbjct: 108342 tccgacgccatgaagactggttccttctacggttaga 108306



 Score =  125 bits (63), Expect = 6e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                          
Query: 267    gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 326
              ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 113205 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 113146

                                                                 
Query: 327    catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 377
              | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 113145 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 113095



 Score =  119 bits (60), Expect = 4e-23
 Identities = 81/88 (92%)
 Strand = Plus / Minus

                                                                          
Query: 133    ccgaccaacttcctcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccat 192
              |||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 109838 ccgaccaacttcctggggaagaagctgaagaagcaggtgacatcggcggtgaactaccat 109779

                                          
Query: 193    ggcaagagctccaaggccaacaggttca 220
              ||||||||||||||   |||||||||||
Sbjct: 109778 ggcaagagctccaacatcaacaggttca 109751



 Score =  109 bits (55), Expect = 4e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                          
Query: 768    gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 827
              |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 112679 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 112620

                                                         
Query: 828    cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 870
              ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 112619 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 112577



 Score = 75.8 bits (38), Expect = 5e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                          
Query: 655    ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 714
              |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 112778 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 112719

                                                    
Query: 715    ggtaagatgtgctgcctcttcatcaacgatcttgacgc 752
              || |||||||||   || ||||||||||| || |||||
Sbjct: 112718 gggaagatgtgcgtgctgttcatcaacgacctggacgc 112681



 Score = 61.9 bits (31), Expect = 8e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                     
Query: 86     agatggctgctgccttctcctccaccgtcggggctccgg 124
              |||||||||||||||||||||||||||| || |||||||
Sbjct: 109984 agatggctgctgccttctcctccaccgttggagctccgg 109946



 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                          
Query: 955    atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 1014
              ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460

                  
Query: 1015   ttcc 1018
              ||||
Sbjct: 112459 ttcc 112456



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 1654   aactacgacccaacggcaaggagcgacgacggcagctgc 1692
              ||||||||||| || || |||||||||||||||||||||
Sbjct: 112091 aactacgaccctaccgccaggagcgacgacggcagctgc 112053



 Score = 52.0 bits (26), Expect = 0.007
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 1090   ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
              ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 574    ttccagtgtgagcttgtgttcgccaagatgggcatcaa 611
              ||||||||||| || || |||||||||||||| |||||
Sbjct: 112906 ttccagtgtgatctcgtcttcgccaagatggggatcaa 112869



 Score = 42.1 bits (21), Expect = 7.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 1156   gagaacattggcaagaggctggtgaactc 1184
              |||||||| |||| |||||||||||||||
Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  513 bits (259), Expect = e-142
 Identities = 418/471 (88%)
 Strand = Plus / Minus

                                                                         
Query: 612   ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
             ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||
Sbjct: 31035 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 30976

                                                                         
Query: 672   catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
              ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 30975 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 30916

                                                                         
Query: 732   cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| ||
Sbjct: 30915 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 30856

                                                                         
Query: 792   caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
              |||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||
Sbjct: 30855 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgca 30796

                                                                         
Query: 852   gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
             |||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||
Sbjct: 30795 gctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaa 30736

                                                                         
Query: 912   cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
             ||| ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||
Sbjct: 30735 cgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactg 30676

                                                                         
Query: 972   ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 1031
             |||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| ||
Sbjct: 30675 ggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgt 30616

                                                                
Query: 1032  cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 1082
             |   ||||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 30615 ccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 30565



 Score =  270 bits (136), Expect = 2e-68
 Identities = 178/192 (92%)
 Strand = Plus / Minus

                                                                         
Query: 420   gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 479
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 31312 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 31253

                                                                         
Query: 480   tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 539
              || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 31252 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 31193

                                                                         
Query: 540   gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 599
             |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 31192 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 31133

                         
Query: 600   gatgggcatcaa 611
             |||||| |||||
Sbjct: 31132 gatggggatcaa 31121



 Score =  176 bits (89), Expect = 2e-40
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                         
Query: 262   gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
             |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 31583 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 31524

                                                                         
Query: 322   aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
             |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 31523 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 31464

                                          
Query: 382   ctcagctcctacgagtacgtcagccaggg 410
             |||||||||||||||||| ||||||||||
Sbjct: 31463 ctcagctcctacgagtacctcagccaggg 31435



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                         
Query: 1616  tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
             |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 29133 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 29074

                                                
Query: 1676  gcgacgacggcagctgcctttacaccttttaagca 1710
             |||||||||||||||||||||||||||||||||||
Sbjct: 29073 gcgacgacggcagctgcctttacaccttttaagca 29039



 Score =  129 bits (65), Expect = 4e-26
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                         
Query: 1156  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
             |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 30399 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 30340

                                                                         
Query: 1216  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
             ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 30339 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 30280

                                                                         
Query: 1276  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
             ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 30279 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 30220

                                                  
Query: 1336  caggatgcgatgaagactggttccttctacggttaga 1372
                || || ||||||||||||||||||||||||||||
Sbjct: 30219 tccgacgccatgaagactggttccttctacggttaga 30183



 Score =  125 bits (63), Expect = 6e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                         
Query: 267   gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 326
             ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 35082 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 35023

                                                                
Query: 327   catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 377
             | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 35022 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 34972



 Score =  119 bits (60), Expect = 4e-23
 Identities = 81/88 (92%)
 Strand = Plus / Minus

                                                                         
Query: 133   ccgaccaacttcctcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccat 192
             |||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 31715 ccgaccaacttcctggggaagaagctgaagaagcaggtgacatcggcggtgaactaccat 31656

                                         
Query: 193   ggcaagagctccaaggccaacaggttca 220
             ||||||||||||||   |||||||||||
Sbjct: 31655 ggcaagagctccaacatcaacaggttca 31628



 Score =  109 bits (55), Expect = 4e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                         
Query: 768   gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 827
             |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 34556 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 34497

                                                        
Query: 828   cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 870
             ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 34496 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 34454



 Score = 75.8 bits (38), Expect = 5e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                         
Query: 655   ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 714
             |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 34655 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 34596

                                                   
Query: 715   ggtaagatgtgctgcctcttcatcaacgatcttgacgc 752
             || |||||||||   || ||||||||||| || |||||
Sbjct: 34595 gggaagatgtgcgtgctgttcatcaacgacctggacgc 34558



 Score = 61.9 bits (31), Expect = 8e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 86    agatggctgctgccttctcctccaccgtcggggctccgg 124
             |||||||||||||||||||||||||||| || |||||||
Sbjct: 31861 agatggctgctgccttctcctccaccgttggagctccgg 31823



 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 955   atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 1014
             ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337

                 
Query: 1015  ttcc 1018
             ||||
Sbjct: 34336 ttcc 34333



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 1654  aactacgacccaacggcaaggagcgacgacggcagctgc 1692
             ||||||||||| || || |||||||||||||||||||||
Sbjct: 33968 aactacgaccctaccgccaggagcgacgacggcagctgc 33930



 Score = 52.0 bits (26), Expect = 0.007
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 1090  ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
             ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 574   ttccagtgtgagcttgtgttcgccaagatgggcatcaa 611
             ||||||||||| || || |||||||||||||| |||||
Sbjct: 34783 ttccagtgtgatctcgtcttcgccaagatggggatcaa 34746



 Score = 42.1 bits (21), Expect = 7.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 1156  gagaacattggcaagaggctggtgaactc 1184
             |||||||| |||| |||||||||||||||
Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score =  513 bits (259), Expect = e-142
 Identities = 418/471 (88%)
 Strand = Plus / Minus

                                                                            
Query: 612      ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
                ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||
Sbjct: 28304297 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28304238

                                                                            
Query: 672      catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
                 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 28304237 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28304178

                                                                            
Query: 732      cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
                ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| ||
Sbjct: 28304177 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 28304118

                                                                            
Query: 792      caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
                 |||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||
Sbjct: 28304117 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgca 28304058

                                                                            
Query: 852      gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
                |||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||
Sbjct: 28304057 gctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaa 28303998

                                                                            
Query: 912      cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
                ||| ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||
Sbjct: 28303997 cgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactg 28303938

                                                                            
Query: 972      ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 1031
                |||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| ||
Sbjct: 28303937 ggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgt 28303878

                                                                   
Query: 1032     cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 1082
                |   ||||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 28303877 ccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 28303827



 Score =  270 bits (136), Expect = 2e-68
 Identities = 178/192 (92%)
 Strand = Plus / Minus

                                                                            
Query: 420      gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 479
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28304574 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28304515

                                                                            
Query: 480      tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 539
                 || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 28304514 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28304455

                                                                            
Query: 540      gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 599
                |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 28304454 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28304395

                            
Query: 600      gatgggcatcaa 611
                |||||| |||||
Sbjct: 28304394 gatggggatcaa 28304383



 Score =  176 bits (89), Expect = 2e-40
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                            
Query: 262      gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 321
                |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 28304845 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 28304786

                                                                            
Query: 322      aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 381
                |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 28304785 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 28304726

                                             
Query: 382      ctcagctcctacgagtacgtcagccaggg 410
                |||||||||||||||||| ||||||||||
Sbjct: 28304725 ctcagctcctacgagtacctcagccaggg 28304697



 Score =  133 bits (67), Expect = 2e-27
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                            
Query: 1616     tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
                |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 28302395 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 28302336

                                                   
Query: 1676     gcgacgacggcagctgcctttacaccttttaagca 1710
                |||||||||||||||||||||||||||||||||||
Sbjct: 28302335 gcgacgacggcagctgcctttacaccttttaagca 28302301



 Score =  129 bits (65), Expect = 4e-26
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                            
Query: 1156     gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
                |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28303602

                                                                            
Query: 1216     aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
                ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 28303601 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28303542

                                                                            
Query: 1276     gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
                ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 28303541 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28303482

                                                     
Query: 1336     caggatgcgatgaagactggttccttctacggttaga 1372
                   || || ||||||||||||||||||||||||||||
Sbjct: 28303481 tccgacgccatgaagactggttccttctacggttaga 28303445



 Score =  125 bits (63), Expect = 6e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                            
Query: 267      gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 326
                ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 28308344 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 28308285

                                                                   
Query: 327      catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 377
                | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 28308284 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28308234



 Score =  119 bits (60), Expect = 4e-23
 Identities = 81/88 (92%)
 Strand = Plus / Minus

                                                                            
Query: 133      ccgaccaacttcctcgggaagaagctcaagaagcaggtgacctcggccgtgaactaccat 192
                |||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 28304977 ccgaccaacttcctggggaagaagctgaagaagcaggtgacatcggcggtgaactaccat 28304918

                                            
Query: 193      ggcaagagctccaaggccaacaggttca 220
                ||||||||||||||   |||||||||||
Sbjct: 28304917 ggcaagagctccaacatcaacaggttca 28304890



 Score =  109 bits (55), Expect = 4e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 768      gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 827
                |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 28307818 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28307759

                                                           
Query: 828      cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 870
                ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28307758 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28307716



 Score = 75.8 bits (38), Expect = 5e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                            
Query: 655      ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 714
                |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 28307917 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28307858

                                                      
Query: 715      ggtaagatgtgctgcctcttcatcaacgatcttgacgc 752
                || |||||||||   || ||||||||||| || |||||
Sbjct: 28307857 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28307820



 Score = 61.9 bits (31), Expect = 8e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                       
Query: 86       agatggctgctgccttctcctccaccgtcggggctccgg 124
                |||||||||||||||||||||||||||| || |||||||
Sbjct: 28305123 agatggctgctgccttctcctccaccgttggagctccgg 28305085



 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 955      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 1014
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599

                    
Query: 1015     ttcc 1018
                ||||
Sbjct: 28307598 ttcc 28307595



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 1654     aactacgacccaacggcaaggagcgacgacggcagctgc 1692
                ||||||||||| || || |||||||||||||||||||||
Sbjct: 28307230 aactacgaccctaccgccaggagcgacgacggcagctgc 28307192



 Score = 52.0 bits (26), Expect = 0.007
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 1090     ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
                ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 574      ttccagtgtgagcttgtgttcgccaagatgggcatcaa 611
                ||||||||||| || || |||||||||||||| |||||
Sbjct: 28308045 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28308008



 Score = 42.1 bits (21), Expect = 7.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 1156     gagaacattggcaagaggctggtgaactc 1184
                |||||||| |||| |||||||||||||||
Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  509 bits (257), Expect = e-140
 Identities = 512/597 (85%)
 Strand = Plus / Plus

                                                                        
Query: 430  gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 489
            ||||||| |||||  || |||||||| |||||||| |||||||||||||||||||| || 
Sbjct: 256  gacaacaacatggatggtttctacattgctcctgcattcatggacaagcttgttgttcac 315

                                                                        
Query: 490  ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 549
             || |||| ||||||||| |||| || ||||| ||| | || || ||||||||||| |||
Sbjct: 316  atcaccaagaacttcatgtccctccctaacattaaggttcctctaatcttgggtatttgg 375

                                                                        
Query: 550  ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 609
            |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 376  ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 435

                                                                        
Query: 610  aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 669
            |||||||||||||||||||||||||| ||||| ||||| ||||| || || |||||||||
Sbjct: 436  aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 495

                                                                        
Query: 670  ctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc 729
             | ||||||||  |||||||||| ||||| ||||| ||||| ||||| || ||||||  |
Sbjct: 496  ttgatcaggcaaaggtaccgtgaagctgccgacataatcaaaaagggcaaaatgtgcgcc 555

                                                                        
Query: 730  ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 789
            |||||||| |||||||| || |||||||| ||| | ||||| |||||||| || ||||||
Sbjct: 556  ctcttcattaacgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacacc 615

                                                                        
Query: 790  gtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 849
            ||||||||||||||||| || || ||||| |||||||||||||||  |||||||||||| 
Sbjct: 616  gtcaacaaccagatggttaatgctaccctcatgaacatcgccgataaccccaccaacgtc 675

                                                                        
Query: 850  cagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 909
            |||||||| || |||||||||||||| |||||||||||||| |||||  ||||||| |||
Sbjct: 676  cagctccccggtatgtacaacaaggaagagaacccccgtgtccccattatcgtcactggt 735

                                                                        
Query: 910  aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 969
            ||||||||||| || || || |||||||| |||||||| |||||||||||||| || |||
Sbjct: 736  aacgatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaaattttac 795

                                                                     
Query: 970  tgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgac 1026
            ||||| || ||  | ||||||||| ||||||| ||||| ||||| |||  |||||||
Sbjct: 796  tgggcaccaactagggacgaccgtgtcggtgtttgcaaaggtattttcaggaccgac 852



 Score = 48.1 bits (24), Expect = 0.11
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1055 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 1114
            |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 881  tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940

                
Query: 1115 acga 1118
            ||||
Sbjct: 941  acga 944

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  502 bits (253), Expect = e-138
 Identities = 523/613 (85%)
 Strand = Plus / Plus

                                                                        
Query: 419  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 478
            ||||| |||| ||||||| |||||  || |||||||| || || || |||||||||||||
Sbjct: 431  agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490

                                                                        
Query: 479  ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 538
            |||| |||||  || |||| |||||| |||  || || ||||||||||| || || ||||
Sbjct: 491  ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550

                                                                        
Query: 539  tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 598
            ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || ||||
Sbjct: 551  tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610

                                                                        
Query: 599  agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 658
            ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || ||||
Sbjct: 611  agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670

                                                                        
Query: 659  agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 718
            | || |||||||| ||||||||  |||||||||| ||||| ||||| |||||||||||||
Sbjct: 671  aacctgccaagctgatcaggcaaaggtaccgtgaagctgctgacattatcaagaagggta 730

                                                                        
Query: 719  agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 778
            | ||||||||||| |||||||||||||| |||||||| || ||| | ||||| ||||| |
Sbjct: 731  aaatgtgctgcctgttcatcaacgatctcgacgctggagctggtcgtatgggtggaacaa 790

                                                                        
Query: 779  cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 838
            | || ||||| || ||||||||||||||||| |||||||| |||||||| || ||   ||
Sbjct: 791  ctcaatacactgttaacaaccagatggtgaatgccaccctcatgaacattgctgacaacc 850

                                                                        
Query: 839  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 898
            | || || || ||||||||||| |||||||||||||| |||||||| |||||||| ||| 
Sbjct: 851  caacaaatgtccagctccctggtatgtacaacaaggaagagaaccctcgtgtgcctatca 910

                                                                        
Query: 899  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 958
            | ||||| |||||||| ||||||||  | ||||||||||| |||||||||||||||||||
Sbjct: 911  ttgtcactggtaacgacttctcgacattgtacgctcctcttatccgtgatggtcgtatgg 970

                                                                        
Query: 959  agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            | || |||||||||||||| ||| | || |||||||| ||||||||||||||||| ||| 
Sbjct: 971  aaaaattctactgggctcctaccagggaagaccgtattggtgtctgcaagggtattttca 1030

                         
Query: 1019 agaccgacaatgt 1031
             ||| ||||||||
Sbjct: 1031 ggactgacaatgt 1043



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 1294 gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgc 1343
            |||||||  ||||||||  |||| || || ||||||||||||||||||||
Sbjct: 1306 gctgacaagtacatgagtgaggctgcccttggtgatgctaaccaggatgc 1355

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 2 mRNA, partial cds
          Length = 1462

 Score =  494 bits (249), Expect = e-136
 Identities = 510/597 (85%)
 Strand = Plus / Plus

                                                                        
Query: 430  gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 489
            ||||||| |||||  || ||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 257  gacaacaacatggatggtttctacatcgctcctgcattcatggacaagcttgttgttcac 316

                                                                        
Query: 490  ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 549
             ||  ||| ||||||||| |||| || ||||| ||| | || || ||| ||||||| |||
Sbjct: 317  atcagcaagaacttcatgtccctccctaacattaaggttcctctaatcctgggtatttgg 376

                                                                        
Query: 550  ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 609
            |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 377  ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 436

                                                                        
Query: 610  aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 669
            |||||||||||||||||||||||||| ||||| ||||| ||||| || || |||||||||
Sbjct: 437  aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 496

                                                                        
Query: 670  ctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc 729
             | ||||||||  |||||||||| || || ||||| ||||| ||||| || ||||||  |
Sbjct: 497  ttgatcaggcaaaggtaccgtgaagccgccgacataatcaaaaagggcaaaatgtgcgcc 556

                                                                        
Query: 730  ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 789
             | ||||| || ||||| || |||||||| ||| | ||||| |||||||| || ||||||
Sbjct: 557  ttgttcattaatgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacacc 616

                                                                        
Query: 790  gtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 849
            ||||||||||||||||| ||||| ||||| |||||||||||||||  |||||||||||| 
Sbjct: 617  gtcaacaaccagatggttaacgctaccctcatgaacatcgccgataaccccaccaacgtc 676

                                                                        
Query: 850  cagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 909
            |||||||| || |||||||||||||| |||||||||||||| |||||| ||||||| |||
Sbjct: 677  cagctccccggtatgtacaacaaggaagagaacccccgtgtccccatcatcgtcactggt 736

                                                                        
Query: 910  aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 969
            ||||||||||| || || || |||||||| |||||||| |||||||||||||| || |||
Sbjct: 737  aacgatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaaattttac 796

                                                                     
Query: 970  tgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgac 1026
            ||||| || ||  | ||||||||||||||||| ||||| ||||| |||  |||||||
Sbjct: 797  tgggcaccaactagggacgaccgtatcggtgtttgcaaaggtattttcaggaccgac 853



 Score = 48.1 bits (24), Expect = 0.11
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1055 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 1114
            |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 882  tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941

                
Query: 1115 acga 1118
            ||||
Sbjct: 942  acga 945

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  452 bits (228), Expect = e-123
 Identities = 548/652 (84%), Gaps = 2/652 (0%)
 Strand = Plus / Plus

                                                                        
Query: 447  cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 506
            ||||||||| || ||| |||||||||||||| ||||||| ||  || |||| |||| | |
Sbjct: 514  cttctacattgccccttctttcatggacaagattgttgttcacatcaccaagaactactt 573

                                                                        
Query: 507  gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 566
            || | |||| ||||||||| | || || ||||||||||| ||||||||||| ||||||||
Sbjct: 574  gaacttgcctaacatcaaggttcccctgatcttgggtatttggggaggcaaaggtcaagg 633

                                                                        
Query: 567  aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 626
             ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 634  taaatccttccaatgtgagcttgtgttcgccaagatgggaatcaaccccatcatgatgag 693

                                                                        
Query: 627  tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 686
            ||| |||||  |||| ||||| ||||| ||||||||||| ||| | ||||||||  ||||
Sbjct: 694  tgcgggagaattggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggta 753

                                                                        
Query: 687  ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatc 745
            ||||||||| |||||||| ||    ||||| |||||||| ||| || |||||||||||||
Sbjct: 754  ccgtgaggcagcagacataattgccaagggaaagatgtg-tgctctgttcatcaacgatc 812

                                                                        
Query: 746  ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 805
            | ||||| ||||| ||  | ||||| || ||||| || |||||||| |||||||||||||
Sbjct: 813  tcgacgcgggtgctggacgtatgggaggcaccacacaatacaccgtgaacaaccagatgg 872

                                                                        
Query: 806  tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 865
            | ||||||||||| |||||||| || ||   ||||||||| || || |||||||| ||||
Sbjct: 873  ttaacgccaccctcatgaacattgctgacaaccccaccaatgtccaactccctggtatgt 932

                                                                        
Query: 866  acaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgc 925
            |||||||| | |||||| ||||||| |||||  ||||||| |||||||| ||||| ||  
Sbjct: 933  acaacaagcaagagaacgcccgtgttcccattatcgtcactggtaacgacttctccacct 992

                                                                        
Query: 926  tctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtg 985
            | |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993  tgtacgctccccttatccgtgatggtcgtatggagaagttctactgggctcccacccgtg 1052

                                                                        
Query: 986  acgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctg 1045
            | ||||||||||||||   ||  |||||||||  ||||||||||||   ||| ||    |
Sbjct: 1053 aggaccgtatcggtgttgccaccggtatcttcaggaccgacaatgttcctgaggaccacg 1112

                                                                
Query: 1046 tcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 1097
            | |||||| |||||||||||||||| || ||||| ||||| || ||||||||
Sbjct: 1113 ttgtcaagctcgtcgacaccttccctggccaatctattgatttcttcggtgc 1164

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  410 bits (207), Expect = e-111
 Identities = 467/551 (84%), Gaps = 2/551 (0%)
 Strand = Plus / Plus

                                                                        
Query: 457  gctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgccc 516
            ||||| ||||| ||||||||||||||||| ||  || |||| |||||||||||||| || 
Sbjct: 485  gctcccgcttttatggacaagcttgttgttcacatcaccaagaacttcatgacccttcct 544

                                                                        
Query: 517  aacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattc 576
            ||||| ||| | || |||||||||||||| ||||||||||| ||||| || || || |||
Sbjct: 545  aacatgaaggttcctctcatcttgggtatttggggaggcaaaggtcagggcaagtctttc 604

                                                                        
Query: 577  cagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagag 636
            ||||| |||||||| || ||||||||| | |||| ||| |||||||||||||||||||| 
Sbjct: 605  cagtgcgagcttgtctttgccaagatgagaatcagccctatcatgatgagtgccggagaa 664

                                                                        
Query: 637  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 696
             |||| ||||| ||||| ||||| || || ||||| ||||||||  |||||||||| || 
Sbjct: 665  ttggaaagtggaaacgcaggagaacccgcgaagctgatcaggcaaaggtaccgtgaagca 724

                                                                        
Query: 697  gcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctgg 755
            || ||||| |||| ||||||||| ||||| ||| |||||||||||||||||||| || ||
Sbjct: 725  gccgacattatcaggaagggtaaaatgtg-tgcactcttcatcaacgatcttgatgcagg 783

                                                                        
Query: 756  tgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccac 815
             || ||| || | || |||||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 784  agctggtcggcttggtggaaccacccaatacactgtcaacaaccaaatggtgaatgccac 843

                                                                        
Query: 816  cctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagga 875
            ||| |||||||| || |||  ||| || ||||| ||||| || || ||||||||||||||
Sbjct: 844  cctcatgaacattgctgataacccgacaaacgtccagcttccaggtatgtacaacaagga 903

                                                                        
Query: 876  ggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcc 935
            ||||||||||||||| || ||| | |||||||||||||||||||| ||  | ||||||||
Sbjct: 904  ggagaacccccgtgtcccaatcattgtcaccggtaacgatttctcaacattgtacgctcc 963

                                                                        
Query: 936  tctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 995
            ||| |||||||| ||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 964  tctcatccgtgacggtcgtatggagaagttctactgggctcccacccgcgaagatcgtat 1023

                       
Query: 996  cggtgtctgca 1006
             || |||||||
Sbjct: 1024 tggagtctgca 1034



 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 291 ctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggc 350
           |||||||||||| || |||||||| ||||| ||||| |  |||||||| |||||||||||
Sbjct: 319 ctccgacgaccaacaagacatcacaagaggaaagggtaaggtggactccctcttccaggc 378



 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 106/132 (80%)
 Strand = Plus / Plus

                                                                        
Query: 1204 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 1263
            ||||||||||| ||||||||  |||| ||||| || ||||||||  ||||||| ||||| 
Sbjct: 1232 ttcgagcagccgaagatgactatcgaaaagctcctcgagtacggaaacatgcttgtccaa 1291

                                                                        
Query: 1264 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 1323
            ||||| || ||||| ||| | || ||  | ||||| |  ||| ||||| |||| ||||| 
Sbjct: 1292 gagcaagagaatgtgaagagagttcaattggctgataagtacttgagcgaggctgctctt 1351

                        
Query: 1324 ggtgatgctaac 1335
            ||||||||||||
Sbjct: 1352 ggtgatgctaac 1363



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1060 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 1119
            |||||||||||||| ||||| ||||| || || |||||  || | ||| |||| ||||||
Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147

                              
Query: 1120 gatgaggtgcgcaagtgg 1137
            ||||| ||| | ||||||
Sbjct: 1148 gatgaagtgaggaagtgg 1165

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  406 bits (205), Expect = e-109
 Identities = 471/557 (84%), Gaps = 2/557 (0%)
 Strand = Plus / Plus

                                                                        
Query: 449  tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatga 508
            ||||||| || ||||| || ||||||||||||||||| ||  || |||| |||||| |||
Sbjct: 630  tctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttcttga 689

                                                                        
Query: 509  ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 568
             | |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |
Sbjct: 690  acttgcccaacatcaagataccactcatcttgggtgtttggggaggcaagggtcaaggta 749

                                                                        
Query: 569  aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 628
            |||| ||||| ||||||||||||||||||||| | || || |||||||||||||||||||
Sbjct: 750  aatccttccaatgtgagcttgtgttcgccaagttaggaataaaccccatcatgatgagtg 809

                                                                        
Query: 629  ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 688
            |||||||  |||| ||||| || || ||||||||||| ||| | ||||||||  ||||||
Sbjct: 810  ccggagaattggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtacc 869

                                                                        
Query: 689  gtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatctt 747
            ||||||| |||||| ||||    |||||||||||||| ||| || |||||||||||||| 
Sbjct: 870  gtgaggcagcagacttgattgctaagggtaagatgtg-tgctctattcatcaacgatctg 928

                                                                        
Query: 748  gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 807
            ||  | ||||| ||  | ||||| || ||||| || |||||||| |||||||||||||| 
Sbjct: 929  gaacccggtgctggacgtatgggaggcaccacccaatacaccgtaaacaaccagatggtt 988

                                                                        
Query: 808  aacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtac 867
            |||||||| ||  ||||||| || ||   ||| ||||| || || |||||||| ||||||
Sbjct: 989  aacgccacactcctgaacattgctgacaacccaaccaatgtccaactccctggtatgtac 1048

                                                                        
Query: 868  aacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctc 927
            |||||| |||| ||  ||||||| |||||| | || || |||||||||||||| ||  | 
Sbjct: 1049 aacaagcaggacaatgcccgtgtccccatcattgttactggtaacgatttctccaccttg 1108

                                                                        
Query: 928  tacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgac 987
            |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1109 tacgctccccttatccgtgatggtcgtatggagaagttctactgggctcccacccgtgag 1168

                             
Query: 988  gaccgtatcggtgtctg 1004
            |||||||| ||||||||
Sbjct: 1169 gaccgtattggtgtctg 1185



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1055 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 1114
            |||| ||| ||||||| |||||||| || ||||||||||| ||  || | ||||| || |
Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295

                      
Query: 1115 acgacgatga 1124
            ||||||||||
Sbjct: 1296 acgacgatga 1305

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  404 bits (204), Expect = e-109
 Identities = 529/630 (83%), Gaps = 8/630 (1%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 438
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 391  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 450

                                                                        
Query: 439  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 498
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 451  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 510

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatct-ggggaggcaa 557
            |||||| |||| ||||| ||||||||| | ||||| || |||||  ||| ||||||||||
Sbjct: 511  aacttcttgactctgcctaacatcaaggttccacttattttgggc-tctcggggaggcaa 569

                                                                        
Query: 558  gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 617
             |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| ||
Sbjct: 570  aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 629

                                                                        
Query: 618  catgatgagtgccggagagctggagagtgggaacgctggaga-gccagccaagctcatca 676
            |||||||||||| |||||||| |||||||| ||||| ||||| | | || ||||| ||| 
Sbjct: 630  catgatgagtgctggagagcttgagagtggaaacgcaggagaagtccgc-aagcttatcc 688

                                                                        
Query: 677  ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 736
            | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||
Sbjct: 689  gtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttca 748

                                                                        
Query: 737  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 796
            |||||||||||||||||||||||||| | ||||| || || || |||||||| |||||||
Sbjct: 749  tcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 808

                                                                        
Query: 797  accagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctcc 856
            |||||||||| ||||| || || |||||||| || |||  ||| |||||||| |||||||
Sbjct: 809  accagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcc 868

                                                                        
Query: 857  ctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatt 916
            | || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||||
Sbjct: 869  caggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatt 928

                                                                        
Query: 917  tctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttct--actgggc 974
            |||| ||  | |||| |||||| |||| |||||| ||||||||||||||||  |||||  
Sbjct: 929  tctccaccttatacggtcctctcatccttgatggacgtatggagaagttcttgactgg-- 986

                                          
Query: 975  tcccacccgtgacgaccgtatcggtgtctg 1004
             || |||||||| |||||||||||||||||
Sbjct: 987  cccgacccgtgaagaccgtatcggtgtctg 1016

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  400 bits (202), Expect = e-108
 Identities = 478/570 (83%)
 Strand = Plus / Plus

                                                                        
Query: 448  ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 507
            |||||||| ||||| |||||||||||||||||||| || ||  || ||||||||||||||
Sbjct: 476  ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 535

                                                                        
Query: 508  accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 567
            || || |||||||| ||| | || ||||| ||||||||||||||||| || |||||||| 
Sbjct: 536  actctccccaacataaaggttcctctcattttgggtatctggggaggtaaaggtcaaggt 595

                                                                        
Query: 568  aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 627
            ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 596  aaatctttccagtgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 655

                                                                        
Query: 628  gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 687
            ||||||||  ||||||| || ||||| |||||||| || ||| | |||||||| ||||  
Sbjct: 656  gccggagaattggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtgt 715

                                                                        
Query: 688  cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 747
            |||||||| || ||||| ||||||||||| |||||||  ||||| || ||||| ||||||
Sbjct: 716  cgtgaggcggccgacatcatcaagaagggaaagatgtcttgcctatttatcaatgatctt 775

                                                                        
Query: 748  gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 807
            || || ||||| |||||| | || || || || || ||||| || |||||||| ||||||
Sbjct: 776  gatgcaggtgccggtaggcttggtgggacaactcaatacactgtgaacaaccaaatggtg 835

                                                                        
Query: 808  aacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtac 867
            || || ||||| |||||||| || ||    || ||||| || |||||||| || ||||||
Sbjct: 836  aatgctaccctcatgaacattgctgacaatccaaccaatgttcagctcccgggtatgtac 895

                                                                        
Query: 868  aacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctc 927
            |||||||| ||||| || ||||| || ||| ||||||| ||||| || ||||||||  | 
Sbjct: 896  aacaaggaagagaatccacgtgtaccgatcatcgtcacaggtaatgacttctcgacattg 955

                                                                        
Query: 928  tacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgac 987
            ||||||||||| || |||||||||||||||||||| ||||||||||| |||||| | || 
Sbjct: 956  tacgctcctctcattcgtgatggtcgtatggagaaattctactgggcgcccaccagagaa 1015

                                          
Query: 988  gaccgtatcggtgtctgcaagggtatcttc 1017
            ||||| || ||||||||||  |||||||||
Sbjct: 1016 gaccgaattggtgtctgcactggtatcttc 1045

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  398 bits (201), Expect = e-107
 Identities = 492/589 (83%)
 Strand = Plus / Plus

                                                                        
Query: 419  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 478
            ||||| |||| ||||||| |||||  || |||||||| || || || |||||||||||||
Sbjct: 431  agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490

                                                                        
Query: 479  ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 538
            |||| |||||  || |||| |||||| |||  || || ||||||||||| || || ||||
Sbjct: 491  ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550

                                                                        
Query: 539  tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 598
            ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || ||||
Sbjct: 551  tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610

                                                                        
Query: 599  agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 658
            ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || ||||
Sbjct: 611  agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670

                                                                        
Query: 659  agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 718
            |||| || ||||| ||||||||  |||| ||||| || || || || ||||||||||| |
Sbjct: 671  agcccgcaaagctgatcaggcaaaggtatcgtgaagcagctgatatcatcaagaagggaa 730

                                                                        
Query: 719  agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 778
            | ||||||||||| || ||||||||||| || || || || ||| | ||||| ||||| |
Sbjct: 731  aaatgtgctgcctgtttatcaacgatctcgatgccggagctggtcgtatgggtggaacaa 790

                                                                        
Query: 779  cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 838
            | || ||||| || ||||| ||||||||||| |||||||| |||||||| || ||   ||
Sbjct: 791  ctcaatacactgttaacaatcagatggtgaatgccaccctcatgaacatagctgacaacc 850

                                                                        
Query: 839  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 898
            | || || || ||||| |||||||||||||||||||| |||||||| ||||| |||||| 
Sbjct: 851  caacaaatgtccagcttcctggcatgtacaacaaggaagagaaccctcgtgttcccatca 910

                                                                        
Query: 899  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 958
            | ||||| |||||||| ||||| ||  | || || ||||| ||||||||||| |||||||
Sbjct: 911  ttgtcactggtaacgacttctcaacattgtatgcccctcttatccgtgatggccgtatgg 970

                                                             
Query: 959  agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaa 1007
            |||| ||||||||||| |||||| | || |||||||| |||||||||||
Sbjct: 971  agaaattctactgggcacccaccagggaggaccgtattggtgtctgcaa 1019

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  396 bits (200), Expect = e-106
 Identities = 448/528 (84%), Gaps = 2/528 (0%)
 Strand = Plus / Plus

                                                                       
Query: 448 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 507
           |||||||| |||||||||||  |||||||||||||||| ||  || |||| |||||||||
Sbjct: 469 ttctacattgctcctgcttttctggacaagcttgttgttcacatcaccaagaacttcatg 528

                                                                       
Query: 508 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 567
           ||| |||||||||||||| | || |||||  | |||||||||||||||||||| ||||||
Sbjct: 529 accttgcccaacatcaaggttcctctcattcttggtatctggggaggcaagggacaagga 588

                                                                       
Query: 568 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 627
           || || ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 589 aagtctttccaatgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 648

                                                                       
Query: 628 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 687
           || |||||| |||| ||||| || || ||||||||||| ||  | ||||||||| | |||
Sbjct: 649 gctggagagttggaaagtggaaatgccggagagccagcaaaattgatcaggcagagatac 708

                                                                       
Query: 688 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatct 746
           ||||| ||||||||  |||||   ||||| |||||||| ||| || ||||||||||||||
Sbjct: 709 cgtgaagctgcagatttgatcgccaagggaaagatgtg-tgctctattcatcaacgatct 767

                                                                       
Query: 747 tgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggt 806
           ||| || || || ||| |  | || |||||||| || ||||| || ||||||||||||||
Sbjct: 768 tgatgcaggagcaggtcgtcttggtggaaccacccaatacactgtgaacaaccagatggt 827

                                                                       
Query: 807 gaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgta 866
           ||| ||||| || |||||||| || |||  ||| || || |||||||| ||||| |||||
Sbjct: 828 gaatgccactctcatgaacattgctgataaccctacaaatgtgcagcttcctggtatgta 887

                                                                       
Query: 867 caacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgct 926
           ||||||||| |||||| |||||||||||||| | ||||||||||| |||||||| |||||
Sbjct: 888 caacaaggaagagaacgcccgtgtgcccatcattgtcaccggtaatgatttctcaacgct 947

                                                           
Query: 927 ctacgctcctctgatccgtgatggtcgtatggagaagttctactgggc 974
            || |||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 948 gtatgctcctctcattcgtgatgggcgtatggagaagttctactgggc 995



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 268 tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 326
           ||||||||||| || ||||||||||| || ||||| || |||||||| || ||||||||
Sbjct: 295 tggaagggtctggcctacgatatctctgatgaccaacaagacatcacaagggggaaggg 353

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  394 bits (199), Expect = e-106
 Identities = 505/607 (83%)
 Strand = Plus / Plus

                                                                        
Query: 419  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 478
            ||||| |||| ||||||| || ||  || |||||||| ||||| |||||  |||||||||
Sbjct: 436  agtacaactttgacaacatcaaggatggtttctacattgctccagcttttttggacaagc 495

                                                                        
Query: 479  ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 538
            ||||||| ||  || |||| |||||||||||| |||||||||||||| | || |||||  
Sbjct: 496  ttgttgttcacatcgccaagaacttcatgaccttgcccaacatcaaggttcctctcattc 555

                                                                        
Query: 539  tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 598
            | ||| |||||||||||||||| ||||||||||| ||||| ||||||||||| || ||||
Sbjct: 556  ttggtgtctggggaggcaagggacaaggaaaatctttccaatgtgagcttgtctttgcca 615

                                                                        
Query: 599  agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 658
            ||||||| ||||||||||||||||||||||| |||||| |||| ||||| || || ||||
Sbjct: 616  agatgggaatcaaccccatcatgatgagtgctggagagttggaaagtggaaatgccggag 675

                                                                        
Query: 659  agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 718
            ||||||| ||  | || |||||| | |||||||| ||  ||||| | ||||||||||| |
Sbjct: 676  agccagcaaaattgattaggcagagataccgtgaagcctcagacttaatcaagaagggaa 735

                                                                        
Query: 719  agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 778
            |||||||    || |||||||| |||||||| || || || ||| |  | || |||||||
Sbjct: 736  agatgtgtgttctgttcatcaatgatcttgatgcaggagcaggtcgtcttggtggaacca 795

                                                                        
Query: 779  cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 838
            | || ||||| || ||||||||||||||||| ||||| || |||||||| || |||  ||
Sbjct: 796  cccaatacactgtgaacaaccagatggtgaatgccactctcatgaacattgctgataacc 855

                                                                        
Query: 839  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 898
            |||| || |||||||| ||||| |||||||||||||| || ||| |||||||||||||| 
Sbjct: 856  ccacaaatgtgcagcttcctggtatgtacaacaaggaagataacgcccgtgtgcccatca 915

                                                                        
Query: 899  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 958
            | ||||| |||||||||||||| || || || |||||||| |||||||||||||||||||
Sbjct: 916  ttgtcactggtaacgatttctcaacactttatgctcctctcatccgtgatggtcgtatgg 975

                                                                        
Query: 959  agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            |||||||||||||||| || ||  | || ||||| || ||||| |||||||| || ||||
Sbjct: 976  agaagttctactgggcaccaacaagggaagaccgcattggtgtttgcaagggaattttcc 1035

                   
Query: 1019 agaccga 1025
             ||||||
Sbjct: 1036 ggaccga 1042

---

>gb|DQ915974.1| Acer rubrum cultivar Florida Flame chloroplast
            ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            large protein isoform mRNA, complete cds; nuclear gene
            for chloroplast product
          Length = 1480

 Score =  391 bits (197), Expect = e-105
 Identities = 467/557 (83%)
 Strand = Plus / Plus

                                                                        
Query: 451  tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 510
            ||||| ||||| ||||||||||||||||||||||| ||  || |||| ||||||||| | 
Sbjct: 394  tacattgctcccgctttcatggacaagcttgttgttcacatcaccaagaacttcatgtct 453

                                                                        
Query: 511  ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 570
            ||||| ||||||||||| ||  | ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 454  ctgcctaacatcaagattcctttgatcttgggtatttggggaggcaaaggtcagggaaaa 513

                                                                        
Query: 571  tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 630
            |||||||| ||||||||||| ||||| |||||||| || | ||| || ||||||||||||
Sbjct: 514  tcattccaatgtgagcttgttttcgcaaagatgggtattacccctattatgatgagtgcc 573

                                                                        
Query: 631  ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 690
            ||||| ||||| ||||| ||||| ||||| || || ||||| ||||||||  | || |||
Sbjct: 574  ggagaactggaaagtggaaacgcgggagaacccgcgaagcttatcaggcaaagatatcgt 633

                                                                        
Query: 691  gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 750
            ||||| || || || ||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 634  gaggcagctgatataatcaagaagggaaagatgtgctgcctcttcatcaatgatcttgat 693

                                                                        
Query: 751  gctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaac 810
            || || || ||  | |||||||||||||| || ||||| || |||||||||||||| || 
Sbjct: 694  gccggagctggacgtatgggcggaaccactcaatacacagttaacaaccagatggttaat 753

                                                                        
Query: 811  gccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 870
            || || || |||||||| || |||   || ||||  || ||||||||||| |||||||||
Sbjct: 754  gctactctcatgaacattgctgataatccaaccagtgtccagctccctggaatgtacaac 813

                                                                        
Query: 871  aaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctac 930
            |||||||| ||||||||||| || ||| | ||||| |||||||| || || ||  | || 
Sbjct: 814  aaggaggaaaacccccgtgtcccaatcattgtcactggtaacgacttttcaaccttgtat 873

                                                                        
Query: 931  gctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgac 990
            |||||||| ||||||||||||||||||||||| |||||||||||||| ||| | || |||
Sbjct: 874  gctcctcttatccgtgatggtcgtatggagaaattctactgggctcctaccagggaagac 933

                             
Query: 991  cgtatcggtgtctgcaa 1007
            || || |||||||||||
Sbjct: 934  cgcattggtgtctgcaa 950



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1057 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 1116
            |||||||||||||| || ||||| || |||||||||||||| ||| | ||  | ||||||
Sbjct: 1000 gtcgacaccttccctggccaatcaatcgactttttcggtgccctgagggccagagtgtac 1059

                                 
Query: 1117 gacgatgaggtgcgcaagtgg 1137
            |||||||| ||| | ||||||
Sbjct: 1060 gacgatgaagtgaggaagtgg 1080



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1201 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 1260
            ||||||||||| || || |||||| |||| ||||| || ||||||||  ||||||| |||
Sbjct: 1144 accttcgagcaacccaaaatgacaatcgacaagctccttgagtacggaaacatgcttgtc 1203

                                 
Query: 1261 caggagcaggacaatgtcaag 1281
            |||||||| || || ||||||
Sbjct: 1204 caggagcaagagaacgtcaag 1224



 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 292 tccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcg 351
           ||||| ||||| || |||||||||||||| |||||  | |||||||| ||||||||||| 
Sbjct: 238 tccgatgaccaacaagacatcaccagaggaaagggtttggtggactctctcttccaggcc 297

               
Query: 352 ccca 355
           ||||
Sbjct: 298 ccca 301

---

>gb|DQ915973.1| Acer rubrum cultivar Florida Flame chloroplast
            ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            small protein isoform mRNA, complete cds; nuclear gene
            for chloroplast product
          Length = 1519

 Score =  391 bits (197), Expect = e-105
 Identities = 467/557 (83%)
 Strand = Plus / Plus

                                                                        
Query: 451  tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 510
            ||||| ||||| ||||||||||||||||||||||| ||  || |||| ||||||||| | 
Sbjct: 394  tacattgctcccgctttcatggacaagcttgttgttcacatcaccaagaacttcatgtct 453

                                                                        
Query: 511  ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 570
            ||||| ||||||||||| ||  | ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 454  ctgcctaacatcaagattcctttgatcttgggtatttggggaggcaaaggtcagggaaaa 513

                                                                        
Query: 571  tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 630
            |||||||| ||||||||||| ||||| |||||||| || | ||| || ||||||||||||
Sbjct: 514  tcattccaatgtgagcttgttttcgcaaagatgggtattacccctattatgatgagtgcc 573

                                                                        
Query: 631  ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 690
            ||||| ||||| ||||| ||||| ||||| || || ||||| ||||||||  | || |||
Sbjct: 574  ggagaactggaaagtggaaacgcgggagaacccgcgaagcttatcaggcaaagatatcgt 633

                                                                        
Query: 691  gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 750
            ||||| || || || ||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 634  gaggcagctgatataatcaagaagggaaagatgtgctgcctcttcatcaatgatcttgat 693

                                                                        
Query: 751  gctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaac 810
            || || || ||  | |||||||||||||| || ||||| || |||||||||||||| || 
Sbjct: 694  gccggagctggacgtatgggcggaaccactcaatacacagttaacaaccagatggttaat 753

                                                                        
Query: 811  gccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 870
            || || || |||||||| || |||   || ||||  || ||||||||||| |||||||||
Sbjct: 754  gctactctcatgaacattgctgataatccaaccagtgtccagctccctggaatgtacaac 813

                                                                        
Query: 871  aaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctac 930
            |||||||| ||||||||||| || ||| | ||||| |||||||| || || ||  | || 
Sbjct: 814  aaggaggaaaacccccgtgtcccaatcattgtcactggtaacgacttttcaaccttgtat 873

                                                                        
Query: 931  gctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgac 990
            |||||||| ||||||||||||||||||||||| |||||||||||||| ||| | || |||
Sbjct: 874  gctcctcttatccgtgatggtcgtatggagaaattctactgggctcctaccagggaagac 933

                             
Query: 991  cgtatcggtgtctgcaa 1007
            || || |||||||||||
Sbjct: 934  cgcattggtgtctgcaa 950



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1057 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 1116
            |||||||||||||| || ||||| || |||||||||||||| ||| | ||  | ||||||
Sbjct: 1000 gtcgacaccttccctggccaatcaatcgactttttcggtgccctgagggccagagtgtac 1059

                                 
Query: 1117 gacgatgaggtgcgcaagtgg 1137
            |||||||| ||| | ||||||
Sbjct: 1060 gacgatgaagtgaggaagtgg 1080



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1201 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 1260
            ||||||||||| || || |||||| |||| ||||| || ||||||||  ||||||| |||
Sbjct: 1144 accttcgagcaacccaaaatgacaatcgacaagctccttgagtacggaaacatgcttgtc 1203

                                 
Query: 1261 caggagcaggacaatgtcaag 1281
            |||||||| || || ||||||
Sbjct: 1204 caggagcaagagaacgtcaag 1224



 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 292 tccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcg 351
           ||||| ||||| || |||||||||||||| |||||  | |||||||| ||||||||||| 
Sbjct: 238 tccgatgaccaacaagacatcaccagaggaaagggtttggtggactctctcttccaggcc 297

               
Query: 352 ccca 355
           ||||
Sbjct: 298 ccca 301

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  377 bits (190), Expect = e-100
 Identities = 349/402 (86%)
 Strand = Plus / Minus

                                                                         
Query: 616   atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 675
             |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| |||
Sbjct: 14555 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 14496

                                                                         
Query: 676   aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 735
              | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||
Sbjct: 14495 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 14436

                                                                         
Query: 736   atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 795
             ||||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||
Sbjct: 14435 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaac 14376

                                                                         
Query: 796   aaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 855
             ||||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||
Sbjct: 14375 aaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctc 14316

                                                                         
Query: 856   cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 915
             || || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||
Sbjct: 14315 ccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgat 14256

                                                                         
Query: 916   ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 975
             ||||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| 
Sbjct: 14255 ttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcc 14196

                                                       
Query: 976   cccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
             || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 14195 ccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 14154



 Score = 85.7 bits (43), Expect = 5e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 529   ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 588
             ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 14733 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 14674

                                    
Query: 589   gtgttcgccaagatgggcatcaa 611
             ||  | ||||||||||| |||||
Sbjct: 14673 gtcatggccaagatgggtatcaa 14651



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 451   tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 510
             ||||| ||||||||||||||||||||||||||||| ||  || |||| |||||| |||| 
Sbjct: 14910 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 14851

                            
Query: 511   ctgcccaacatcaag 525
             ||||| |||||||||
Sbjct: 14850 ctgcctaacatcaag 14836

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  377 bits (190), Expect = e-100
 Identities = 349/402 (86%)
 Strand = Plus / Plus

                                                                        
Query: 616  atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 675
            |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| |||
Sbjct: 2728 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 2787

                                                                        
Query: 676  aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 735
             | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||
Sbjct: 2788 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 2847

                                                                        
Query: 736  atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 795
            ||||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||
Sbjct: 2848 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaac 2907

                                                                        
Query: 796  aaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 855
            ||||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||
Sbjct: 2908 aaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctc 2967

                                                                        
Query: 856  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 915
            || || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||
Sbjct: 2968 ccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgat 3027

                                                                        
Query: 916  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 975
            ||||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| 
Sbjct: 3028 ttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcc 3087

                                                      
Query: 976  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 3088 ccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 3129



 Score = 85.7 bits (43), Expect = 5e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                        
Query: 529  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 588
            ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 2550 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 2609

                                   
Query: 589  gtgttcgccaagatgggcatcaa 611
            ||  | ||||||||||| |||||
Sbjct: 2610 gtcatggccaagatgggtatcaa 2632



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                        
Query: 451  tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 510
            ||||| ||||||||||||||||||||||||||||| ||  || |||| |||||| |||| 
Sbjct: 2373 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 2432

                           
Query: 511  ctgcccaacatcaag 525
            ||||| |||||||||
Sbjct: 2433 ctgcctaacatcaag 2447

---

>gb|DQ915976.1| Acer rubrum cultivar North Wood chloroplast ribulose-1,5-bisphosphate
            carboxylase/oxygenase activase large protein isoform
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1480

 Score =  375 bits (189), Expect = e-100
 Identities = 465/557 (83%)
 Strand = Plus / Plus

                                                                        
Query: 451  tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 510
            ||||| ||||| | |||||||| |||||||||||| ||  || |||| ||||||||| | 
Sbjct: 394  tacattgctcccgttttcatgggcaagcttgttgttcacatcaccaagaacttcatgtct 453

                                                                        
Query: 511  ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 570
            ||||| ||||||||||| ||  | ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 454  ctgcctaacatcaagattcctttgatcttgggtatttggggaggcaaaggtcagggaaaa 513

                                                                        
Query: 571  tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 630
            |||||||| ||||||||||| ||||| |||||||| || | ||| || ||||||||||||
Sbjct: 514  tcattccaatgtgagcttgttttcgcaaagatgggtattacccctattatgatgagtgcc 573

                                                                        
Query: 631  ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 690
            ||||| ||||| ||||| ||||| ||||| || || ||||| ||||||||  | || |||
Sbjct: 574  ggagaactggaaagtggaaacgcgggagaacccgcgaagcttatcaggcaaagatatcgt 633

                                                                        
Query: 691  gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 750
            ||||| || || || ||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 634  gaggcagctgatataatcaagaagggaaagatgtgctgcctcttcatcaatgatcttgat 693

                                                                        
Query: 751  gctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaac 810
            || || || ||  | |||||||||||||| || ||||| || |||||||||||||| || 
Sbjct: 694  gccggagctggacgtatgggcggaaccactcaatacacagttaacaaccagatggttaat 753

                                                                        
Query: 811  gccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 870
            || || || |||||||| || |||   || ||||  || ||||||||||| |||||||||
Sbjct: 754  gctactctcatgaacattgctgataatccaaccagtgtccagctccctggaatgtacaac 813

                                                                        
Query: 871  aaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctac 930
            |||||||| ||||||||||| || ||| | ||||| |||||||| || || ||  | || 
Sbjct: 814  aaggaggaaaacccccgtgtcccaatcattgtcactggtaacgacttttcaaccttgtat 873

                                                                        
Query: 931  gctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgac 990
            |||||||| ||||||||||||||||||||||| |||||||||||||| ||| | || |||
Sbjct: 874  gctcctcttatccgtgatggtcgtatggagaaattctactgggctcctaccagggaagac 933

                             
Query: 991  cgtatcggtgtctgcaa 1007
            || || |||||||||||
Sbjct: 934  cgcattggtgtctgcaa 950



 Score = 65.9 bits (33), Expect = 5e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1057 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 1116
            |||||||||||||| || ||||| || |||||||||||||| ||| | ||| | ||||||
Sbjct: 1000 gtcgacaccttccctggccaatcaatcgactttttcggtgccctgagggctagagtgtac 1059

                                 
Query: 1117 gacgatgaggtgcgcaagtgg 1137
            |||||||| ||| | ||||||
Sbjct: 1060 gacgatgaagtgaggaagtgg 1080



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1201 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 1260
            ||||||||||| || || |||||| |||| ||||| || ||||||||  ||||||| |||
Sbjct: 1144 accttcgagcaacccaaaatgacaatcgacaagctccttgagtacggaaacatgcttgtc 1203

                                 
Query: 1261 caggagcaggacaatgtcaag 1281
            |||||||| || || ||||||
Sbjct: 1204 caggagcaagagaacgtcaag 1224



 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 292 tccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcg 351
           ||||| ||||| || |||||||||||||| |||||  | |||||||| ||||||||||| 
Sbjct: 238 tccgatgaccaacaagacatcaccagaggaaagggtttggtggactctctcttccaggcc 297

               
Query: 352 ccca 355
           ||||
Sbjct: 298 ccca 301

---

>gb|DQ915975.1| Acer rubrum cultivar North Wood chloroplast ribulose-1,5-bisphosphate
            carboxylase/oxygenase activase small protein isoform
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1519

 Score =  375 bits (189), Expect = e-100
 Identities = 465/557 (83%)
 Strand = Plus / Plus

                                                                        
Query: 451  tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 510
            ||||| ||||| | |||||||| |||||||||||| ||  || |||| ||||||||| | 
Sbjct: 394  tacattgctcccgttttcatgggcaagcttgttgttcacatcaccaagaacttcatgtct 453

                                                                        
Query: 511  ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 570
            ||||| ||||||||||| ||  | ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 454  ctgcctaacatcaagattcctttgatcttgggtatttggggaggcaaaggtcagggaaaa 513

                                                                        
Query: 571  tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 630
            |||||||| ||||||||||| ||||| |||||||| || | ||| || ||||||||||||
Sbjct: 514  tcattccaatgtgagcttgttttcgcaaagatgggtattacccctattatgatgagtgcc 573

                                                                        
Query: 631  ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 690
            ||||| ||||| ||||| ||||| ||||| || || ||||| ||||||||  | || |||
Sbjct: 574  ggagaactggaaagtggaaacgcgggagaacccgcgaagcttatcaggcaaagatatcgt 633

                                                                        
Query: 691  gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 750
            ||||| || || || ||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 634  gaggcagctgatataatcaagaagggaaagatgtgctgcctcttcatcaatgatcttgat 693

                                                                        
Query: 751  gctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaac 810
            || || || ||  | |||||||||||||| || ||||| || |||||||||||||| || 
Sbjct: 694  gccggagctggacgtatgggcggaaccactcaatacacagttaacaaccagatggttaat 753

                                                                        
Query: 811  gccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 870
            || || || |||||||| || |||   || ||||  || ||||||||||| |||||||||
Sbjct: 754  gctactctcatgaacattgctgataatccaaccagtgtccagctccctggaatgtacaac 813

                                                                        
Query: 871  aaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctac 930
            |||||||| ||||||||||| || ||| | ||||| |||||||| || || ||  | || 
Sbjct: 814  aaggaggaaaacccccgtgtcccaatcattgtcactggtaacgacttttcaaccttgtat 873

                                                                        
Query: 931  gctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgac 990
            |||||||| ||||||||||||||||||||||| |||||||||||||| ||| | || |||
Sbjct: 874  gctcctcttatccgtgatggtcgtatggagaaattctactgggctcctaccagggaagac 933

                             
Query: 991  cgtatcggtgtctgcaa 1007
            || || |||||||||||
Sbjct: 934  cgcattggtgtctgcaa 950



 Score = 65.9 bits (33), Expect = 5e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1057 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 1116
            |||||||||||||| || ||||| || |||||||||||||| ||| | ||| | ||||||
Sbjct: 1000 gtcgacaccttccctggccaatcaatcgactttttcggtgccctgagggctagagtgtac 1059

                                 
Query: 1117 gacgatgaggtgcgcaagtgg 1137
            |||||||| ||| | ||||||
Sbjct: 1060 gacgatgaagtgaggaagtgg 1080



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1201 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 1260
            ||||||||||| || || |||||| |||| ||||| || ||||||||  ||||||| |||
Sbjct: 1144 accttcgagcaacccaaaatgacaatcgacaagctccttgagtacggaaacatgcttgtc 1203

                                 
Query: 1261 caggagcaggacaatgtcaag 1281
            |||||||| || || ||||||
Sbjct: 1204 caggagcaagagaacgtcaag 1224



 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 292 tccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcg 351
           ||||| ||||| || |||||||||||||| |||||  | |||||||| ||||||||||| 
Sbjct: 238 tccgatgaccaacaagacatcaccagaggaaagggtttggtggactctctcttccaggcc 297

               
Query: 352 ccca 355
           ||||
Sbjct: 298 ccca 301

---

>gb|AC189306.1| Brassica rapa subsp. pekinensis clone KBrB032C14, complete sequence
          Length = 104954

 Score =  369 bits (186), Expect = 2e-98
 Identities = 348/402 (86%)
 Strand = Plus / Minus

                                                                         
Query: 616   atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 675
             |||||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| |||
Sbjct: 21780 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaaccagccaagctgatc 21721

                                                                         
Query: 676   aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 735
              | ||  |||||||||| || |||||||||||||| ||||| || ||||| || || |||
Sbjct: 21720 cgtcaaaggtaccgtgaagcagcagacatgatcaaaaagggaaaaatgtgttgtctattc 21661

                                                                         
Query: 736   atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 795
             ||||||||||| ||||||||||| ||| | ||||| || || || |||||||| ||||||
Sbjct: 21660 atcaacgatctcgacgctggtgctggtcgtatgggtggtactactcagtacacagtcaac 21601

                                                                         
Query: 796   aaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 855
             ||||||||||| ||||| ||||| |||||||| || |||  ||| |||||||| ||||||
Sbjct: 21600 aaccagatggttaacgcaaccctcatgaacattgctgataacccaaccaacgtccagctc 21541

                                                                         
Query: 856   cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 915
             || || |||||||||||||| || ||| | ||||| |||||| |||||||||||||||||
Sbjct: 21540 ccgggaatgtacaacaaggaagaaaacgcacgtgtccccatcatcgtcaccggtaacgat 21481

                                                                         
Query: 916   ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 975
             ||||| || |||||||| ||||| |||||||| || ||||||||||||||||||||||| 
Sbjct: 21480 ttctccactctctacgcacctctcatccgtgacgggcgtatggagaagttctactgggca 21421

                                                       
Query: 976   cccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
             ||||| ||||| |||||||| |||||||||||||||||||||
Sbjct: 21420 cccacacgtgaggaccgtattggtgtctgcaagggtatcttc 21379



 Score = 93.7 bits (47), Expect = 2e-15
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 529   ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 588
             ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 22113 ccacttattttgggtatttggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 22054

                                    
Query: 589   gtgttcgccaagatgggcatcaa 611
             ||  | |||||||||||||||||
Sbjct: 22053 gtcatggccaagatgggcatcaa 22031



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 451   tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 510
             ||||| ||||||||||||||||||||||||||||| ||  || |||| |||||| |||||
Sbjct: 22348 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgacc 22289

                            
Query: 511   ctgcccaacatcaag 525
              |||| |||||||||
Sbjct: 22288 ttgcctaacatcaag 22274

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score =  355 bits (179), Expect = 4e-94
 Identities = 485/587 (82%)
 Strand = Plus / Plus

                                                                       
Query: 388 tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 447
           |||||||| ||||||||||| || || ||  ||||| |||| |||||||   |||  || 
Sbjct: 396 tcctacgaatacgtcagccaaggtcttcgccagtacaacttggacaacaagttggacgga 455

                                                                       
Query: 448 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 507
           |||||||||||||||||||||||||||||||||||||| ||  || |||| |||||| ||
Sbjct: 456 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttg 515

                                                                       
Query: 508 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 567
           |   |||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 516 aaattgcccaacatcaaggttccacttatcttgggtatctggggaggcaaaggtcaaggc 575

                                                                       
Query: 568 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 627
           ||||||||||||||||| ||||| |||   |||||||| ||||||||||| |||||||||
Sbjct: 576 aaatcattccagtgtgaacttgtcttcagaaagatgggaatcaaccccattatgatgagt 635

                                                                       
Query: 628 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 687
           || |||||  |||| ||||| || || ||||||||||||||| | || |||||  |||||
Sbjct: 636 gctggagaattggaaagtggaaatgcaggagagccagccaagttgattaggcaaaggtac 695

                                                                       
Query: 688 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 747
            | || || ||||| || ||||  ||||| || ||||| |||||||||||||||||||| 
Sbjct: 696 agagaagcagcagaaatcatcagaaagggaaatatgtgttgcctcttcatcaacgatctc 755

                                                                       
Query: 748 gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 807
           || || || || ||||| ||||| ||||| || || ||||| ||||||||||| ||||||
Sbjct: 756 gatgcaggagctggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtg 815

                                                                       
Query: 808 aacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtac 867
           || ||||| || |||||||| || ||   ||| || || || |||||||| || ||||||
Sbjct: 816 aatgccactctcatgaacattgctgacaacccgacaaatgtccagctccccggtatgtac 875

                                                                       
Query: 868 aacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctc 927
           |||||| | |||||  || | || || ||  ||||||| |||||||||||||| ||  | 
Sbjct: 876 aacaagcaagagaatgccagggtccctattatcgtcactggtaacgatttctccacattg 935

                                                          
Query: 928 tacgctcctctgatccgtgatggtcgtatggagaagttctactgggc 974
           || ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 936 tatgctccacttatccgtgatggtcgtatggagaagttctactgggc 982

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
            (pJQ4)
          Length = 1655

 Score =  343 bits (173), Expect = 1e-90
 Identities = 554/681 (81%)
 Strand = Plus / Plus

                                                                        
Query: 448  ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 507
            ||||||||||||||| |||||||||||||||||||||| ||  || |||| |||||| ||
Sbjct: 426  ttctacatcgctccttctttcatggacaagcttgttgttcacatcaccaagaacttcttg 485

                                                                        
Query: 508  accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 567
            |   |||||||||||||| | |||||||| |||||| ||||||||||||| |||||||| 
Sbjct: 486  aaattgcccaacatcaaggttccactcattttgggtgtctggggaggcaaaggtcaaggt 545

                                                                        
Query: 568  aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 627
            ||||| ||||||||||||||||| |||   |||||||| |||||||| || |||||||||
Sbjct: 546  aaatctttccagtgtgagcttgtcttcagaaagatgggaatcaaccctattatgatgagt 605

                                                                        
Query: 628  gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 687
            ||||||||  |||| ||||| || || |||||||| || ||  | || |||||  |||||
Sbjct: 606  gccggagaattggaaagtggaaatgcaggagagcctgcaaaattgattaggcaaaggtac 665

                                                                        
Query: 688  cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 747
             | ||||| ||||| || |||| ||| || || || || |||||||||||||||||||| 
Sbjct: 666  agagaggcagcagaaatcatcaggaaaggaaacatctgttgcctcttcatcaacgatctc 725

                                                                        
Query: 748  gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 807
            || || || || ||||| ||||| ||||| || || ||||| ||||||||||||||||||
Sbjct: 726  gatgcaggagctggtagaatgggtggaactacccaatacactgtcaacaaccagatggtg 785

                                                                        
Query: 808  aacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtac 867
            || ||||| || |||||||| || |||  ||| || ||||| |||||||| || ||||||
Sbjct: 786  aatgccactctcatgaacattgctgataacccgacaaacgtccagctccccggtatgtac 845

                                                                        
Query: 868  aacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctc 927
            |||||| | |||||| || | || |||||  | ||||| |||||||| ||||| ||  | 
Sbjct: 846  aacaagcaagagaacgccagagtccccattattgtcactggtaacgacttctccacattg 905

                                                                        
Query: 928  tacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgac 987
            || |||||||| ||||||||||||||||||||||||||||| ||||| || ||  | || 
Sbjct: 906  tatgctcctcttatccgtgatggtcgtatggagaagttctattgggcaccaactagggaa 965

                                                                        
Query: 988  gaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtc 1047
            ||  | || ||||| ||||||||||| |||  ||||||||| ||   ||| ||  | || 
Sbjct: 966  gatagaattggtgtttgcaagggtattttcaggaccgacaacgtgcctgaggaagccgtt 1025

                                                                        
Query: 1048 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 1107
             | ||||| ||||| |||||||| |||||||| |||||||| || ||||||||| | || 
Sbjct: 1026 ataaagattgtcgataccttccctggacaatctattgacttctttggtgctctgagggca 1085

                                 
Query: 1108 cgggtgtacgacgatgaggtg 1128
            || || ||||| |||||||||
Sbjct: 1086 cgagtatacgatgatgaggtg 1106

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  337 bits (170), Expect = 8e-89
 Identities = 425/510 (83%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 109  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 168

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||  |||||| ||||||| ||||||
Sbjct: 169  gatccgtcagcgctaccgtgaggccgcggacctgatctcgaagggcaagatgtcctgcct 228

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 229  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 288

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 289  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 348

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| ||||||||||||||||||||||| ||
Sbjct: 349  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgtcgtcaccggcaa 408

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || || || || || || ||||| |||||||||||
Sbjct: 409  cgacttctccacgctgtacgcgccgctcattcgcgacgggcgcatggacaagttctactg 468

                                                                        
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 1031
            ||| |||||||| |||||||| ||||| || |||||||| |||||||  ||||||   ||
Sbjct: 469  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttccgcaccgacggcgt 528

                                                                        
Query: 1032 cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttttt 1091
            |   ||||||   |||||| || |||||||| ||||||| || || ||||| ||||| ||
Sbjct: 529  ccccgacgagcacgtcgtccagctcgtcgacgccttcccgggccagtccatcgacttctt 588

                                          
Query: 1092 cggtgctctgcgtgctcgggtgtacgacga 1121
            ||| || || || || ||||||||||||||
Sbjct: 589  cggcgccctccgcgcccgggtgtacgacga 618

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  337 bits (170), Expect = 8e-89
 Identities = 425/510 (83%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 117  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 176

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||  |||||| ||||||| ||||||
Sbjct: 177  gatccgtcagcgctaccgtgaggcggcggacctgatctcgaagggcaagatgtcctgcct 236

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 237  gttcatcaacgatctggacgccggcgcaggccgcatgggcggcaccacccagtacacggt 296

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 297  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 356

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| ||||||||||||||||||||||| ||
Sbjct: 357  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgtcgtcaccggcaa 416

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || ||||| || || || ||||| |||||||||||
Sbjct: 417  cgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactg 476

                                                                        
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 1031
            ||| |||||||| || ||||| ||||| || |||||||| |||||||  ||||||   ||
Sbjct: 477  ggcgcccacccgggaggaccgcatcggcgtgtgcaagggcatcttccgcaccgacggcgt 536

                                                                        
Query: 1032 cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttttt 1091
            |   ||||||   |||||| || |||||||| ||||||| || || ||||| ||||| ||
Sbjct: 537  ccccgacgagcacgtcgtccagctcgtcgacgccttcccgggccagtccatcgacttctt 596

                                          
Query: 1092 cggtgctctgcgtgctcgggtgtacgacga 1121
            ||| || || || || ||||||||||||||
Sbjct: 597  cggcgccctccgcgcccgggtgtacgacga 626

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  337 bits (170), Expect = 8e-89
 Identities = 440/530 (83%)
 Strand = Plus / Plus

                                                                       
Query: 445 ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 504
           ||||||||||| || ||||||||||||||||| |||||||| ||  || |||| ||||||
Sbjct: 434 ggcttctacattgcccctgctttcatggacaaacttgttgttcacatcaccaagaacttc 493

                                                                       
Query: 505 atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 564
            ||||  |||||||||||||| | ||||||||||||||| | ||||||||||| ||||||
Sbjct: 494 ttgacattgcccaacatcaaggttccactcatcttgggtgtatggggaggcaaaggtcaa 553

                                                                       
Query: 565 ggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatg 624
           || ||||||||||| ||||||||||| |||   |||||||| ||||||||||| ||||||
Sbjct: 554 ggtaaatcattccaatgtgagcttgtcttcagaaagatgggaatcaaccccattatgatg 613

                                                                       
Query: 625 agtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcgg 684
           ||||| |||||  |||| ||||| || || ||||||||||| ||  | || |||||  ||
Sbjct: 614 agtgctggagaattggaaagtggaaatgcaggagagccagctaaattgattaggcaaagg 673

                                                                       
Query: 685 taccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgat 744
           ||| | ||||| || || || |||| ||| || || ||||| || |||||||||||||||
Sbjct: 674 tacagagaggcagctgaaatcatcaggaaaggaaacatgtgttgtctcttcatcaacgat 733

                                                                       
Query: 745 cttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatg 804
           || || || || || ||||| ||||| ||||| || || |||||||||||||||||||||
Sbjct: 734 ctcgatgcaggagctggtagaatgggtggaactacccaatacaccgtcaacaaccagatg 793

                                                                       
Query: 805 gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 864
           ||||| |||||||| |||||||| || ||   ||| || || || |||||||| || |||
Sbjct: 794 gtgaatgccaccctcatgaacattgctgacaacccaacaaatgtccagctccccggtatg 853

                                                                       
Query: 865 tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 924
           ||||||||| | |||||| || | || |||||  | ||||| |||||||| ||||| || 
Sbjct: 854 tacaacaagcaagagaacgccagggtacccattattgtcactggtaacgacttctccaca 913

                                                             
Query: 925 ctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggc 974
            | || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 914 ttgtatgctcctcttatccgtgatggtcgtatggagaagttctactgggc 963

---

>gb|DQ486905.1| Pachysandra terminalis ribulose-1,5-bisphosphate
            carboxylase/oxygenase activase mRNA, partial cds
          Length = 1075

 Score =  333 bits (168), Expect = 1e-87
 Identities = 411/492 (83%)
 Strand = Plus / Plus

                                                                        
Query: 540  gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 599
            |||||||||||||||||| ||||| || ||||| |||||||||||||| || || || ||
Sbjct: 5    gggtatctggggaggcaaaggtcaggggaaatctttccagtgtgagctagtttttgctaa 64

                                                                        
Query: 600  gatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggaga 659
            |||||| |||||||||||||||||||||||||||||  | |||||||| || || |||||
Sbjct: 65   gatgggaatcaaccccatcatgatgagtgccggagaattagagagtggaaatgcaggaga 124

                                                                        
Query: 660  gccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaa 719
            ||| || ||  | ||||||||  | ||| | ||||| || || || |||   ||||| ||
Sbjct: 125  gcccgcaaaattgatcaggcaaagatacagggaggcagcggatattatccgcaagggaaa 184

                                                                        
Query: 720  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 779
            ||||||||| |||||||||||||||||||| || || ||||||||| | || ||||| ||
Sbjct: 185  gatgtgctgtctcttcatcaacgatcttgatgcaggagcgggtaggctcggtggaactac 244

                                                                        
Query: 780  gcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccc 839
             |||||||||||||||||||| |||||||||||||| || |||||||| || |||  |||
Sbjct: 245  ccagtacaccgtcaacaaccaaatggtgaacgccacactcatgaacattgctgataaccc 304

                                                                        
Query: 840  caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 899
             || || || |||||||| || |||||||||||||| |||||||||||||| ||  || |
Sbjct: 305  aacaaatgttcagctccccggtatgtacaacaaggaagagaacccccgtgtcccggtcat 364

                                                                        
Query: 900  cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 959
             ||||||||||| || ||||| ||  | || || ||||| ||||||||||| ||||||||
Sbjct: 365  tgtcaccggtaatgacttctccacattgtatgcccctcttatccgtgatggccgtatgga 424

                                                                        
Query: 960  gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcca 1019
            ||| |||||||||||||||||||| || ||| | |||||||||||||  ||||||||| |
Sbjct: 425  gaaattctactgggctcccacccgggatgacagaatcggtgtctgcaccggtatcttcaa 484

                        
Query: 1020 gaccgacaatgt 1031
            | | ||||||||
Sbjct: 485  ggctgacaatgt 496



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                              
Query: 1051 aagatcgtcgacaccttcccaggacaatccattgactttttcggtgctct 1100
            ||||| || ||||||||||| || |||||||||||||| |||||||||||
Sbjct: 516  aagattgttgacaccttccctggccaatccattgacttcttcggtgctct 565



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1204 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtcca 1262
            ||||||||||| |||||||| ||||||||||| || ||||| ||  ||||||| |||||
Sbjct: 669  ttcgagcagccgaagatgaccgtcgagaagctcctcgagtatggtaacatgcttgtcca 727

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
            partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  331 bits (167), Expect = 5e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                        
Query: 805  gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 864
            |||||||||||||||||||||||||||||   ||| ||||||||||||||||| || |||
Sbjct: 1    gtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatg 60

                                                                        
Query: 865  tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 924
            |||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| |||
Sbjct: 61   tacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacg 120

                                                                        
Query: 925  ctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgt 984
            || ||||| || || |||||||| || |||||||||||||||||||||||||||||||| 
Sbjct: 121  ctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgc 180

                                                                        
Query: 985  gacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtct 1044
            ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||   
Sbjct: 181  gacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggac 240

                                                                        
Query: 1045 gtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgt 1104
             |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| |||
Sbjct: 241  atcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgt 300

                                               
Query: 1105 gctcgggtgtacgacgatgaggtgcgcaagtgggt 1139
            || || || |||||||| |||||||||||||||||
Sbjct: 301  gcccgtgtttacgacgacgaggtgcgcaagtgggt 335



 Score =  123 bits (62), Expect = 2e-24
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1156 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1215
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 352  gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 411

                                                                        
Query: 1216 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1275
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 412  aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 471

                                                                        
Query: 1276 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1335
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 472  gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 531

                                              
Query: 1336 caggatgcgatgaagactggttccttctacggtt 1369
               || || |||||||||||||||||||||||||
Sbjct: 532  tccgacgccatgaagactggttccttctacggtt 565

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  329 bits (166), Expect = 2e-86
 Identities = 361/422 (85%), Gaps = 3/422 (0%)
 Strand = Plus / Plus

                                                                       
Query: 556 aagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccc 615
           ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| ||||  || 
Sbjct: 1   aagggtcaaggaaaatctttccaatgtgaacttgtttttgccaagatgggaatcactcct 60

                                                                       
Query: 616 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 675
           ||||||||||||||||||||  | || ||||| ||||||| ||||||||| |||||||||
Sbjct: 61  atcatgatgagtgccggagaattagaaagtgg-aacgctg-agagccagctaagctcatc 118

                                                                       
Query: 676 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 735
           || ||||| ||||||||||| || || || |||||||||||||| ||||||||| | |||
Sbjct: 119 agacagcg-taccgtgaggcagccgatatcatcaagaagggtaaaatgtgctgcttgttc 177

                                                                       
Query: 736 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 795
           |||||||||||||| |||||||| ||||| ||||| ||||| || || ||||| ||||||
Sbjct: 178 atcaacgatcttgatgctggtgcaggtagaatgggaggaactacacaatacacagtcaac 237

                                                                       
Query: 796 aaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 855
           || |||||||| || || || || |||||||| || |||  ||| ||||| || || |||
Sbjct: 238 aatcagatggttaatgctacactcatgaacattgctgataacccaaccaatgtccaactc 297

                                                                       
Query: 856 cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 915
           ||||| |||||| ||||||||||||||||||||||||||||| ||||||| || ||||||
Sbjct: 298 cctggaatgtacgacaaggaggagaacccccgtgtgcccatcatcgtcacaggaaacgat 357

                                                                       
Query: 916 ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 975
           |||||  | || || ||||| || ||||| |||||||||||||| |||||||||||||||
Sbjct: 358 ttctcagcactatatgctccccttatccgcgatggtcgtatggaaaagttctactgggct 417

             
Query: 976 cc 977
           ||
Sbjct: 418 cc 419

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  323 bits (163), Expect = 1e-84
 Identities = 346/407 (85%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 123  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 183  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 243  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 303  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 362

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 363  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 422

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 423  cgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactg 482

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 483  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  323 bits (163), Expect = 1e-84
 Identities = 346/407 (85%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 305  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 365  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 424

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 425  cgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactg 484

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 485  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  323 bits (163), Expect = 1e-84
 Identities = 346/407 (85%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 129  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 189  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 249  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 308

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 309  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 368

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 369  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 428

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 429  cgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactg 488

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 489  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  323 bits (163), Expect = 1e-84
 Identities = 346/407 (85%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 305  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 365  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 424

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 425  cgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactg 484

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 485  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  323 bits (163), Expect = 1e-84
 Identities = 346/407 (85%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 305  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 365  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 424

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 425  cgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactg 484

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 485  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  323 bits (163), Expect = 1e-84
 Identities = 346/407 (85%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 305  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 365  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 424

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 425  cgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactg 484

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 485  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  323 bits (163), Expect = 1e-84
 Identities = 346/407 (85%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 305  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 365  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 424

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 425  cgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactg 484

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 485  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  323 bits (163), Expect = 1e-84
 Identities = 346/407 (85%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 127  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 187  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 247  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 306

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 307  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 366

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 367  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 426

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 427  cgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactg 486

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 487  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  315 bits (159), Expect = 3e-82
 Identities = 345/407 (84%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 127  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 187  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 247  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 306

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 307  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 366

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 367  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 426

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || ||||| || || || ||||| |||||||||||
Sbjct: 427  cgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactg 486

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 487  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  315 bits (159), Expect = 3e-82
 Identities = 345/407 (84%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 305  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 365  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 424

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || ||||| || || || ||||| |||||||||||
Sbjct: 425  cgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactg 484

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 485  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  315 bits (159), Expect = 3e-82
 Identities = 345/407 (84%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 123  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 183  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 243  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 303  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 362

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 363  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 422

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || ||||| || || || ||||| |||||||||||
Sbjct: 423  cgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactg 482

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 483  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  315 bits (159), Expect = 3e-82
 Identities = 345/407 (84%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 123  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 183  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 243  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 303  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 362

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 363  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 422

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || ||||| || || || ||||| |||||||||||
Sbjct: 423  cgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactg 482

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 483  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  315 bits (159), Expect = 3e-82
 Identities = 345/407 (84%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 305  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 365  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 424

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || ||||| || || || ||||| |||||||||||
Sbjct: 425  cgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactg 484

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 485  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  315 bits (159), Expect = 3e-82
 Identities = 345/407 (84%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 129  ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 189  gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 249  gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 308

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 309  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 368

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||
Sbjct: 369  gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaa 428

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
            ||| ||||| ||||| ||||| || || ||||| || || || ||||| |||||||||||
Sbjct: 429  cgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactg 488

                                                           
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 1018
            ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 489  ggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535

---

>dbj|AK230177.1| Arabidopsis thaliana mRNA for Rubisco activase, partial cds, clone:
            RAFL22-90-J20
          Length = 951

 Score =  305 bits (154), Expect = 3e-79
 Identities = 274/314 (87%)
 Strand = Plus / Plus

                                                                        
Query: 704  tgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggta 763
            |||||||||| || |||||||| || ||||||||||||||||||||||||||||||||| 
Sbjct: 4    tgatcaagaaaggaaagatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtc 63

                                                                        
Query: 764  ggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatga 823
            | ||||| || || || |||||||| ||||||||||||||||| ||||| || || ||||
Sbjct: 64   gtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaacactcatga 123

                                                                        
Query: 824  acatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacc 883
            |||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||| 
Sbjct: 124  acattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaacg 183

                                                                        
Query: 884  cccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatcc 943
            | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||||
Sbjct: 184  cacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcatcc 243

                                                                        
Query: 944  gtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtct 1003
            ||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct: 244  gtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgtct 303

                          
Query: 1004 gcaagggtatcttc 1017
            ||||||||||||||
Sbjct: 304  gcaagggtatcttc 317

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  297 bits (150), Expect = 7e-77
 Identities = 375/450 (83%)
 Strand = Plus / Plus

                                                                        
Query: 557  agggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccca 616
            |||| ||||||||||| |||||   ||||||||| || ||||||||||| ||||||||||
Sbjct: 7    agggacaaggaaaatctttccaagctgagcttgtctttgccaagatgggaatcaacccca 66

                                                                        
Query: 617  tcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatca 676
            ||||||||||||| |||||||| || ||||| || || ||||||||||| ||  | ||||
Sbjct: 67   tcatgatgagtgctggagagcttgaaagtggaaatgcaggagagccagcaaaattgatca 126

                                                                        
Query: 677  ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 736
            | ||| | |||||||| ||  | ||||| |||| ||| || |||||||| || || ||||
Sbjct: 127  gacagagataccgtgaagcctctgacattatcaggaaaggaaagatgtgttgtctgttca 186

                                                                        
Query: 737  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 796
            |||||||||| || || || || ||| | ||||| |||||||| || ||||| |||||||
Sbjct: 187  tcaacgatctcgatgcaggagcaggtcgtatgggtggaaccacacaatacactgtcaaca 246

                                                                        
Query: 797  accagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctcc 856
            |||| |||||||| ||||| || |||||||| || |||  ||||||||| || || ||||
Sbjct: 247  accaaatggtgaatgccacactcatgaacattgctgataaccccaccaatgtccaactcc 306

                                                                        
Query: 857  ctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatt 916
            |||| |||||||||||||| || ||  | |||||||||||| | ||||||||||| ||||
Sbjct: 307  ctggtatgtacaacaaggaagacaatgctcgtgtgcccatcattgtcaccggtaatgatt 366

                                                                        
Query: 917  tctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctc 976
            |||| || || || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 367  tctcaacactttatgctcctctcatccgtgatggtcgtatggagaagttctactgggctc 426

                                          
Query: 977  ccacccgtgacgaccgtatcggtgtctgca 1006
            | ||  | || || ||||| ||||||||||
Sbjct: 427  ctactagagaagatcgtattggtgtctgca 456



 Score = 48.1 bits (24), Expect = 0.11
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1048 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 1107
            |||||||| || ||||||||||| || |||||||| || || ||||||||  || | |||
Sbjct: 498  gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557

                                            
Query: 1108 cgggtgtacgacgatgaggtgcgcaagtgggt 1139
             | |||||||| ||||| ||| | ||||||||
Sbjct: 558  agagtgtacgatgatgaagtgaggaagtgggt 589

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score =  283 bits (143), Expect = 1e-72
 Identities = 431/527 (81%)
 Strand = Plus / Plus

                                                                       
Query: 448 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 507
           |||||||||||||||||||||||||||||||||||||| ||  || |||| |||||| | 
Sbjct: 473 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttctta 532

                                                                       
Query: 508 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 567
           ||  |||||||||||||| | ||||| || |||||| | |||||||| || |||||||| 
Sbjct: 533 acgttgcccaacatcaaggttccacttattttgggtgtttggggaggaaaaggtcaaggt 592

                                                                       
Query: 568 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 627
           ||||||||||| ||||||||||| |||   |||||||| |||||||| || |||||||||
Sbjct: 593 aaatcattccaatgtgagcttgtcttcagaaagatgggaatcaacccaattatgatgagt 652

                                                                       
Query: 628 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 687
           || |||||  | || ||||| || || ||||||||||| ||  | ||||||||  |||||
Sbjct: 653 gctggagaattagaaagtggaaatgcaggagagccagctaaattgatcaggcaaaggtac 712

                                                                       
Query: 688 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 747
            | ||||| || || || |||| |||||| || ||||| |||||||||||||||||||||
Sbjct: 713 agagaggccgcggaaatcatcaggaagggaaacatgtgttgcctcttcatcaacgatctt 772

                                                                       
Query: 748 gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 807
           || || || || ||||| ||||| ||||| || || ||||| ||||||||||| ||||||
Sbjct: 773 gatgcaggagccggtagaatgggtggaactacacaatacactgtcaacaaccaaatggtg 832

                                                                       
Query: 808 aacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtac 867
           || || || || |||||||| || |||  ||| || || || || ||||| || ||||||
Sbjct: 833 aatgctacactcatgaacattgctgataacccgacgaatgtccaactccccggtatgtac 892

                                                                       
Query: 868 aacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctc 927
           |||||| | |||||  || | || || ||  | ||||| |||||||||||||| ||  | 
Sbjct: 893 aacaagcaagagaatgccagggtacctattattgtcactggtaacgatttctccacattg 952

                                                          
Query: 928 tacgctcctctgatccgtgatggtcgtatggagaagttctactgggc 974
           || || ||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 953 tatgcacctcttatccgtgatggtcgtatggagaaattctactgggc 999



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 1048 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 1101
            |||||||||||||| | |||||| |||||||| ||||| || ||||||||||||
Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126

---

>gb|DQ068132.1| Brassica napus isolate mutant Cr3529 clone Bncr24 unknown mRNA
          Length = 340

 Score =  266 bits (134), Expect = 3e-67
 Identities = 218/246 (88%)
 Strand = Plus / Plus

                                                                        
Query: 784  tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 843
            ||||| ||||||||||||||||| ||||| || || |||||||| || |||  |||||||
Sbjct: 10   tacactgtcaacaaccagatggttaacgcaacgctcatgaacattgctgataaccccacc 69

                                                                        
Query: 844  aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 903
            ||||| |||||||| || |||||||||||||| || ||| | ||||| |||||| |||||
Sbjct: 70   aacgtccagctcccaggaatgtacaacaaggaagacaacgcacgtgtccccatcatcgtc 129

                                                                        
Query: 904  accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 963
            ||||||||||||||||| || |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 130  accggtaacgatttctccactctctacgctcctctcatccgtgatggacgtatggagaag 189

                                                                        
Query: 964  ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 1023
            ||||||||||| || |||||||| || |||||||||||||||||||||||||||  ||||
Sbjct: 190  ttctactgggccccgacccgtgaggatcgtatcggtgtctgcaagggtatcttcaggacc 249

                  
Query: 1024 gacaat 1029
            ||||||
Sbjct: 250  gacaat 255

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  266 bits (134), Expect = 3e-67
 Identities = 331/394 (84%), Gaps = 2/394 (0%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||||||||||||||||||||  |||| ||||| || || ||||||||||| ||| |
Sbjct: 2421 ccccatcatgatgagtgccggagaattggaaagtggaaatgcaggagagccagctaagtt 2480

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-c 730
             ||||||||  ||||||||||||| |||||| ||||    |||||||||||||| ||| |
Sbjct: 2481 gatcaggcaaaggtaccgtgaggcagcagacttgattgctaagggtaagatgtg-tgctc 2539

                                                                        
Query: 731  tcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccg 790
            | |||||||||||||| ||  | ||||| ||  | ||||| || ||||| || |||||||
Sbjct: 2540 tattcatcaacgatctggaacccggtgctggacgtatgggaggcaccacccaatacaccg 2599

                                                                        
Query: 791  tcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgc 850
            | |||||||||||||| |||||||| || |||||||| || ||   ||| ||||| || |
Sbjct: 2600 taaacaaccagatggttaacgccacactcatgaacattgctgacaacccaaccaatgtcc 2659

                                                                        
Query: 851  agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 910
            | |||||||| |||||||||||| |||| ||  ||||||| |||||| | || || ||||
Sbjct: 2660 aactccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggta 2719

                                                                        
Query: 911  acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctact 970
            |||||||||| ||  | |||||||| || |||||||||||||||||||||||||||||||
Sbjct: 2720 acgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctact 2779

                                              
Query: 971  gggctcccacccgtgacgaccgtatcggtgtctg 1004
            |||||||||||||||| |||||||| ||||||||
Sbjct: 2780 gggctcccacccgtgaggaccgtattggtgtctg 2813



 Score =  105 bits (53), Expect = 6e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                        
Query: 524  agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 583
            |||| ||||||||||||||| | |||||||||||||||||||| ||||| ||||| ||||
Sbjct: 2238 agataccactcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtg 2297

                             
Query: 584  agcttgtgttcgccaag 600
            |||||||||||||||||
Sbjct: 2298 agcttgtgttcgccaag 2314



 Score = 61.9 bits (31), Expect = 8e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                        
Query: 447  cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 506
            ||||||||| || ||||| || ||||||||||||||||| ||  || |||| |||||| |
Sbjct: 2067 cttctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttctt 2126

                               
Query: 507  gaccctgcccaacatcaag 525
            || | ||||||||||||||
Sbjct: 2127 gaacttgcccaacatcaag 2145

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  242 bits (122), Expect = 4e-60
 Identities = 335/406 (82%)
 Strand = Plus / Plus

                                                                        
Query: 612  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 671
            ||||||||||||||||||||||||  ||||||| || ||||| |||||||| || ||| |
Sbjct: 467  ccccatcatgatgagtgccggagaattggagagcggcaacgcaggagagcccgcgaagtt 526

                                                                        
Query: 672  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 731
             |||||||| ||||  |||||||| || ||||| ||||||||||| |||||||  |||||
Sbjct: 527  gatcaggcaacggtgtcgtgaggcggccgacatcatcaagaagggaaagatgtcttgcct 586

                                                                        
Query: 732  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 791
             || ||||| |||||||| || ||||| |||||| | || || || || || ||||| ||
Sbjct: 587  atttatcaatgatcttgatgcaggtgccggtaggcttggtgggacaactcaatacactgt 646

                                                                        
Query: 792  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 851
             |||||||| |||||||| || ||||| |||||||| || ||    || ||||| || ||
Sbjct: 647  gaacaaccaaatggtgaatgctaccctcatgaacattgctgacaatccaaccaatgttca 706

                                                                        
Query: 852  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 911
            |||||| || |||||||||||||| ||||| || ||||| || ||| ||||||| |||||
Sbjct: 707  gctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtcacaggtaa 766

                                                                        
Query: 912  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 971
             || ||||||||  | ||||||||||| || |||||||||||||||||||| ||||||||
Sbjct: 767  tgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggagaaattctactg 826

                                                          
Query: 972  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 1017
            ||| |||||| | || ||||| || ||||||||||  |||||||||
Sbjct: 827  ggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 872



 Score = 95.6 bits (48), Expect = 5e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                       
Query: 532 ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 591
           ||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||| 
Sbjct: 186 ctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtgagcttgtc 245

                               
Query: 592 ttcgccaagatgggcatcaa 611
           || ||||||||||| |||||
Sbjct: 246 tttgccaagatgggaatcaa 265



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 448 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 507
           |||||||| ||||| |||||||||||||||||||| || ||  || ||||||||||||||
Sbjct: 6   ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 65

             
Query: 508 ac 509
           ||
Sbjct: 66  ac 67

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score =  236 bits (119), Expect = 2e-58
 Identities = 344/419 (82%)
 Strand = Plus / Plus

                                                                        
Query: 602  tgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagc 661
            ||||||||| ||||||| | |||  |||||| |||||||||  ||| ||||| || ||||
Sbjct: 1443 tgggcatcagccccatcgtcatgtctgccggtgagctggagtctggtaacgccggtgagc 1502

                                                                        
Query: 662  cagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaaga 721
            | |||||||||||| | ||||| ||||| |||||| | ||||   | |||||||| ||||
Sbjct: 1503 ccgccaagctcatccgccagcgctaccgcgaggcttccgacagcgtgaagaagggcaaga 1562

                                                                        
Query: 722  tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 781
            |||||| |||||||||||||||||| ||||||||||| ||  | ||||||     ||| |
Sbjct: 1563 tgtgctccctcttcatcaacgatctggacgctggtgctggccgcatgggcatgggcaccc 1622

                                                                        
Query: 782  agtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccca 841
            ||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||  ||| |
Sbjct: 1623 agtacactgtcaacaaccagatggtcaacgctaccctcatgaacatcgctgataacccta 1682

                                                                        
Query: 842  ccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 901
            ||||||||||||| || ||| |||||||  ||| | |||  |||||||| ||||| ||| 
Sbjct: 1683 ccaacgtgcagctgcccggcgtgtacaaggaggtgcagattccccgtgttcccattgtct 1742

                                                                        
Query: 902  tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggaga 961
             ||| |||||||||||||| || || ||||| || || |||||||| || || |||||||
Sbjct: 1743 gcacgggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcatggaga 1802

                                                                       
Query: 962  agttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 1020
            ||| |||||||   ||||||||||| ||||| ||||| ||||||| ||| |||||||||
Sbjct: 1803 agtactactggaaccccacccgtgaggaccgcatcggcgtctgcatgggaatcttccag 1861



 Score = 65.9 bits (33), Expect = 5e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                        
Query: 445  ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 504
            |||||||||||| ||||||||||| |||| ||| |     ||||| |  |||| ||||||
Sbjct: 1128 ggcttctacatctctcctgctttcctggataagatgaccatccatgttgccaagaacttc 1187

                                                                        
Query: 505  atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 564
            |||  ||||||||| |||||| | || |||||| ||||||||||||| |||||||| || 
Sbjct: 1188 atggacctgcccaagatcaaggttcccctcatcctgggtatctggggtggcaagggccag 1247

                 
Query: 565  ggaaa 569
            |||||
Sbjct: 1248 ggaaa 1252



 Score = 42.1 bits (21), Expect = 7.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1264 gagcaggacaatgtcaagcgtgtgcagct 1292
            |||||||| ||||||||||| ||||||||
Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagct 2133

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score =  220 bits (111), Expect = 1e-53
 Identities = 420/523 (80%)
 Strand = Plus / Plus

                                                                       
Query: 450 ctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgac 509
           |||||| ||||||||||| ||||||||||||||||| ||  |||| ||||||||||||| 
Sbjct: 156 ctacattgctcctgcttttatggacaagcttgttgttcacatctcgaaaaacttcatgaa 215

                                                                       
Query: 510 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaa 569
           | |||| ||||||||| | || |||||  | ||||| |||||||||||||||||||||||
Sbjct: 216 cttgcctaacatcaaggttcctctcattcttggtatttggggaggcaagggtcaaggaaa 275

                                                                       
Query: 570 atcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgc 629
            || ||||| ||||||||||| || || ||  |||| |||||||| || |||||||||||
Sbjct: 276 gtccttccaatgtgagcttgtatttgcaaaattgggaatcaacccaattatgatgagtgc 335

                                                                       
Query: 630 cggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccg 689
           ||| || |||||||||||  | || |||||||| || ||  | |||||  |||| |||||
Sbjct: 336 cggtgaactggagagtggagatgcaggagagcccgcaaaattgatcagaaagcgataccg 395

                                                                       
Query: 690 tgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttga 749
           ||| || || |||||  ||||||| || ||||||||    |||||||| || ||||| ||
Sbjct: 396 tgaagcggccgacattgtcaagaaaggaaagatgtgtgtgctcttcattaatgatctgga 455

                                                                       
Query: 750 cgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaa 809
            || || || || || |||||  | || || |||||||| || |||||||||||||| ||
Sbjct: 456 tgcaggagctggaagaatgggtagcacaactcagtacactgtgaacaaccagatggtcaa 515

                                                                       
Query: 810 cgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaa 869
            |||||||| |||||||| || |||  ||| || || || ||| | ||||| ||||||||
Sbjct: 516 tgccaccctcatgaacattgctgataacccaacgaatgttcagttgcctggaatgtacaa 575

                                                                       
Query: 870 caaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctcta 929
           |||||| || || || ||||| || || || || || || || |||||||| ||  | ||
Sbjct: 576 caaggaagaaaatcctcgtgttccaattgttgtgacaggaaatgatttctcaactttgta 635

                                                      
Query: 930 cgctcctctgatccgtgatggtcgtatggagaagttctactgg 972
            |||||  |||| |||||||| |||||||||||||||||||||
Sbjct: 636 tgctccattgattcgtgatgggcgtatggagaagttctactgg 678

---

>gb|DQ068155.1| Brassica napus isolate mutant Cr3529 clone Bn12 unknown mRNA
          Length = 288

 Score =  216 bits (109), Expect = 2e-52
 Identities = 193/221 (87%)
 Strand = Plus / Plus

                                                                       
Query: 451 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 510
           ||||| || |||||||||||||||||||||||||| ||  || |||| |||||| |||| 
Sbjct: 54  tacattgcccctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 113

                                                                       
Query: 511 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 570
            |||| ||||||||| | ||||| || |||||| | ||||||||||| |||||||| |||
Sbjct: 114 ttgcctaacatcaaggttccacttattttgggtgtttggggaggcaaaggtcaaggtaaa 173

                                                                       
Query: 571 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 630
           || |||||||||||||||||  | |||||||||||||||||||| |||||||||||||| 
Sbjct: 174 tccttccagtgtgagcttgtcatggccaagatgggcatcaacccaatcatgatgagtgct 233

                                                    
Query: 631 ggagagctggagagtgggaacgctggagagccagccaagct 671
           |||||||| ||||| |||||||| |||||||||||||||||
Sbjct: 234 ggagagcttgagagcgggaacgcaggagagccagccaagct 274

---

>gb|DQ068131.1| Brassica napus isolate mutant Cr3529 clone Bncr23 unknown mRNA
          Length = 264

 Score =  216 bits (109), Expect = 2e-52
 Identities = 193/221 (87%)
 Strand = Plus / Plus

                                                                       
Query: 451 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 510
           ||||| || |||||||||||||||||||||||||| ||  || |||| |||||| |||| 
Sbjct: 30  tacattgcccctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 89

                                                                       
Query: 511 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 570
            |||| ||||||||| | ||||| || |||||| | ||||||||||| |||||||| |||
Sbjct: 90  ttgcctaacatcaaggttccacttattttgggtgtttggggaggcaaaggtcaaggtaaa 149

                                                                       
Query: 571 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 630
           || |||||||||||||||||  | |||||||||||||||||||| |||||||||||||| 
Sbjct: 150 tccttccagtgtgagcttgtcatggccaagatgggcatcaacccaatcatgatgagtgct 209

                                                    
Query: 631 ggagagctggagagtgggaacgctggagagccagccaagct 671
           |||||||| ||||| |||||||| |||||||||||||||||
Sbjct: 210 ggagagcttgagagcgggaacgcaggagagccagccaagct 250

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
            (pTA1.1)
          Length = 1011

 Score =  198 bits (100), Expect = 5e-47
 Identities = 331/408 (81%)
 Strand = Plus / Plus

                                                                        
Query: 721  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 780
            ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 55   atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 114

                                                                        
Query: 781  cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 840
            || ||||| |||||||||||||||||||| ||||| || ||||||||||| |||  ||| 
Sbjct: 115  caatacactgtcaacaaccagatggtgaatgccactctcatgaacatcgctgataacccg 174

                                                                        
Query: 841  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 900
            || || || |||||||| || |||||||||||| | |||||| || | || |||||  | 
Sbjct: 175  acaaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtccccattatt 234

                                                                        
Query: 901  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 960
            ||||| |||||||| ||||| ||  | || |||||||| |||||||||||||||||||||
Sbjct: 235  gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 294

                                                                        
Query: 961  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 1020
            |||||||| ||||| || ||  | || ||  | || ||||| ||||||||||| |||  |
Sbjct: 295  aagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcagg 354

                                                                        
Query: 1021 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 1080
            |||||||| ||   ||| ||  |||| || ||||| ||||| |||||||| |||||||| 
Sbjct: 355  accgacaacgtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatct 414

                                                            
Query: 1081 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 1128
            |||||||| || ||||||||| | || || || ||||| |||||||||
Sbjct: 415  attgacttctttggtgctctgagggcacgagtatacgatgatgaggtg 462

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
            activase (Rca) gene, partial sequence
          Length = 648

 Score =  182 bits (92), Expect = 3e-42
 Identities = 209/248 (84%)
 Strand = Plus / Plus

                                                                        
Query: 785  acaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacca 844
            |||| ||||||||||||||||| ||||||||||| |||||||| || ||   ||| ||||
Sbjct: 1    acactgtcaacaaccagatggttaacgccaccctcatgaacattgctgacaacccaacca 60

                                                                        
Query: 845  acgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtca 904
            | || ||||||||||| |||||||||||| |||| ||  | ||||| |||||| |||| |
Sbjct: 61   atgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatcgtta 120

                                                                        
Query: 905  ccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagt 964
            | |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||| |
Sbjct: 121  ctggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtatggagaaat 180

                                                                        
Query: 965  tctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccg 1024
            |||||||||| ||||| ||||| |||||||| ||||| ||||  |||||||||  ||| |
Sbjct: 181  tctactgggcacccactcgtgaggaccgtattggtgtttgcactggtatcttcaggactg 240

                    
Query: 1025 acaatgtc 1032
            ||||||||
Sbjct: 241  acaatgtc 248

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
            activase mRNA, complete cds
          Length = 1693

 Score =  176 bits (89), Expect = 2e-40
 Identities = 263/321 (81%)
 Strand = Plus / Plus

                                                                        
Query: 700  gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 759
            ||||| |||||||||||    |||||||  || |||||||||||||| ||||| ||||| 
Sbjct: 612  gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 671

                                                                        
Query: 760  ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 819
            ||  | |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 672  ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 731

                                                                        
Query: 820  atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 879
            ||||||||||||||   ||| |||||||| ||||| || ||  ||||||| || ||||||
Sbjct: 732  atgaacatcgccgacaacccgaccaacgtccagctgcccggtgtgtacaagaacgaggag 791

                                                                        
Query: 880  aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 939
            | ||| || |||||||| ||   ||| || ||||| ||||| || || ||||| || |||
Sbjct: 792  atccctcgcgtgcccattgtgtgcacgggcaacgacttctccaccctgtacgcgcccctg 851

                                                                        
Query: 940  atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 999
            ||||| ||||| || |||||||||| |||||||   |||||||| || ||||| ||||| 
Sbjct: 852  atccgcgatggccgcatggagaagtactactggaaccccacccgcgaggaccgcatcggc 911

                                 
Query: 1000 gtctgcaagggtatcttccag 1020
            || |||| ||| |||||||||
Sbjct: 912  gtgtgcatgggcatcttccag 932



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1060 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 1119
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 972  gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031

              
Query: 1120 ga 1121
            ||
Sbjct: 1032 ga 1033



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 494 ccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggag 553
           |||| |||||||||  ||||||||| |||||| | || |||||  ||||||||||||| |
Sbjct: 406 ccaagaacttcatggacctgcccaagatcaaggtgcccctcattctgggtatctggggtg 465

                  
Query: 554 gcaaggg 560
           |||||||
Sbjct: 466 gcaaggg 472

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score =  168 bits (85), Expect = 4e-38
 Identities = 394/497 (79%)
 Strand = Plus / Plus

                                                                        
Query: 499  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 558
            |||||| ||||||| || ||||| ||| | || |||||  ||||| | |||||||| || 
Sbjct: 522  aacttcttgaccctcccgaacattaaggttcctctcattctgggtgtttggggaggtaaa 581

                                                                        
Query: 559  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 618
            ||||||||||| || ||||||||||| ||||| || || |||||||| |||||||| || 
Sbjct: 582  ggtcaaggaaagtctttccagtgtgaacttgtatttgctaagatgggaatcaaccctatt 641

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            ||||||||||| || ||  | || |||||||| || ||||||||||| ||  | ||||||
Sbjct: 642  atgatgagtgctggggaattagaaagtgggaatgcaggagagccagcaaaattgatcagg 701

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||  | ||| | ||||| || || || |||||||| || || ||||| || || || |||
Sbjct: 702  caaagatacagagaggcagctgatatcatcaagaaagggaaaatgtgttgtctatttatc 761

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            ||||||||||| ||||| || || ||| | || || || || |||||||| || || |||
Sbjct: 762  aacgatcttgatgctggagctggaaggcttggtgggactacccagtacacagtgaataac 821

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| || || || || |||||||| || ||   ||| ||||| |||||||| || 
Sbjct: 822  cagatggtaaatgctactcttatgaacattgctgacaacccaaccaatgtgcagctacca 881

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            |||||||| |||||||| || || ||| | || |||||| | || || |||||||| |||
Sbjct: 882  ggcatgtataacaaggaagaaaatcccagagttcccatcatagtaactggtaacgacttc 941

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || ||| | || || ||||| || ||||||||||| ||||| || |||||||||||||| 
Sbjct: 942  tcaacgttatatgcacctctcattcgtgatggtcggatggataaattctactgggctcca 1001

                             
Query: 979  acccgtgacgaccgtat 995
            || ||||| || |||||
Sbjct: 1002 actcgtgaagatcgtat 1018



 Score = 52.0 bits (26), Expect = 0.007
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1057 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 1116
            |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || 
Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139

                                  
Query: 1117 gacgatgaggtgcgcaagtggg 1138
            |||||||| ||| | |||||||
Sbjct: 1140 gacgatgaagtgagaaagtggg 1161

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score =  141 bits (71), Expect = 1e-29
 Identities = 296/371 (79%)
 Strand = Plus / Minus

                                                                        
Query: 619  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 678
            |||||||||||||||||  |||| ||||| || || |||||||| || ||| | || |||
Sbjct: 7262 atgatgagtgccggagaattggaaagtggaaatgcaggagagcctgcaaagttgattagg 7203

                                                                        
Query: 679  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 738
            ||  |||||||||||||  | ||||| ||||  || || ||||||||||| |||||||||
Sbjct: 7202 caaaggtaccgtgaggcgtccgacattatcagaaaaggaaagatgtgctgtctcttcatc 7143

                                                                        
Query: 739  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 798
            || |||||||| || || || ||||| ||||| || || || || ||||| |||||||||
Sbjct: 7142 aatgatcttgatgcaggagctggtagaatgggtggcactactcaatacacagtcaacaac 7083

                                                                        
Query: 799  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 858
            |||||||| || || ||||| |||||||| || ||   ||| ||||| || || || || 
Sbjct: 7082 cagatggtaaatgcaaccctcatgaacattgctgacaaccctaccaatgttcaacttccc 7023

                                                                        
Query: 859  ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 918
            || ||||||||||| || |||||  |||| || || ||| ||||||| || || || |||
Sbjct: 7022 ggtatgtacaacaaagaagagaatgcccgcgtccctatcatcgtcactggcaatgacttc 6963

                                                                        
Query: 919  tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 978
            || ||| | || |||||| | || |||||||| |||||||| || ||||||||||| || 
Sbjct: 6962 tctacgttgtatgctcctttaattcgtgatggacgtatggaaaaattctactgggcacct 6903

                       
Query: 979  acccgtgacga 989
            || ||||||||
Sbjct: 6902 actcgtgacga 6892



 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 523  aagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgt 582
            ||||| || ||||| ||||| || ||||||||||| ||||||||||| ||||| || |||
Sbjct: 7541 aagattcctctcatattgggcatttggggaggcaaaggtcaaggaaagtcatttcaatgt 7482

                                        
Query: 583  gagcttgtgttcgccaagatgggcatca 610
            |||||||| || ||||||||||| ||||
Sbjct: 7481 gagcttgtatttgccaagatgggaatca 7454

---

>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score =  133 bits (67), Expect = 2e-27
 Identities = 124/143 (86%)
 Strand = Plus / Plus

                                                                        
Query: 864  gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 923
            ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| ||
Sbjct: 1    gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60

                                                                        
Query: 924  gctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccg 983
              | || ||||| || ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 61   cttgtatgctccccttatccgtgatggtcgtatggagaaattctactgggcaccaacccg 120

                                   
Query: 984  tgacgaccgtatcggtgtctgca 1006
             ||||| ||||| ||||||||||
Sbjct: 121  cgacgatcgtattggtgtctgca 143

---

>ref|NM_001075088.1| Oryza sativa (japonica cultivar-group) Os11g0707100 (Os11g0707100)
           mRNA, complete cds
          Length = 1101

 Score =  125 bits (63), Expect = 6e-25
 Identities = 99/111 (89%)
 Strand = Plus / Plus

                                                                       
Query: 267 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 326
           ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 186 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 245

                                                              
Query: 327 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 377
           | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 246 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 296



 Score =  109 bits (55), Expect = 4e-20
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                       
Query: 768 gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 827
           |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 553 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 612

                                                      
Query: 828 cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 870
           ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 613 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 655



 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                       
Query: 574 ttccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccgga 633
           ||||||||||| || || |||||||||||||| ||||||| |||||||||||| ||||||
Sbjct: 397 ttccagtgtgatctcgtcttcgccaagatggggatcaacctcatcatgatgagcgccgga 456

               
Query: 634 gagc 637
           ||||
Sbjct: 457 gagc 460



 Score = 75.8 bits (38), Expect = 5e-10
 Identities = 83/98 (84%)
 Strand = Plus / Plus

                                                                       
Query: 655 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 714
           |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 454 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 513

                                                 
Query: 715 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 752
           || |||||||||   || ||||||||||| || |||||
Sbjct: 514 gggaagatgtgcgtgctgttcatcaacgacctggacgc 551



 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                        
Query: 955  atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 1014
            ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 713  atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 772

                
Query: 1015 ttcc 1018
            ||||
Sbjct: 773  ttcc 776



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 1654 aactacgacccaacggcaaggagcgacgacggcagctgc 1692
            ||||||||||| || || |||||||||||||||||||||
Sbjct: 1051 aactacgaccctaccgccaggagcgacgacggcagctgc 1089

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score =  123 bits (62), Expect = 2e-24
 Identities = 116/134 (86%)
 Strand = Plus / Plus

                                                                        
Query: 700  gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 759
            ||||| |||||||||||    |||||||  || |||||||||||||| ||||| ||||| 
Sbjct: 1824 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 1883

                                                                        
Query: 760  ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 819
            ||  | |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 1884 ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 1943

                          
Query: 820  atgaacatcgccga 833
            ||||||||||||||
Sbjct: 1944 atgaacatcgccga 1957



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1060 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 1119
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721

              
Query: 1120 ga 1121
            ||
Sbjct: 2722 ga 2723



 Score = 46.1 bits (23), Expect = 0.45
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                               
Query: 510  cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 560
            ||||||||| |||||| | || |||||  ||||||||||||| ||||||||
Sbjct: 1634 cctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaaggg 1684

---

>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
            isoform precursor, mRNA, partial cds; nuclear gene for
            chloroplast product
          Length = 93

 Score =  121 bits (61), Expect = 9e-24
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||||||||||    ||||||||||| |||||||||||| ||||
Sbjct: 5    tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 64

                                         
Query: 1676 gcgacgacggcagctgcctttacaccttt 1704
            |||||||||||||||||||||||||||||
Sbjct: 65   gcgacgacggcagctgcctttacaccttt 93

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score =  117 bits (59), Expect = 1e-22
 Identities = 176/215 (81%)
 Strand = Plus / Plus

                                                                       
Query: 760 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 819
           ||||| ||||| ||||| || || ||||| ||||||||||| |||||||| ||||| || 
Sbjct: 8   ggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtgaatgccactctc 67

                                                                       
Query: 820 atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 879
           |||||||| || ||   ||| || || || |||||||| || |||||||||||| | |||
Sbjct: 68  atgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaacaagcaagag 127

                                                                       
Query: 880 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 939
           ||  || | || || ||  ||||||| |||||||||||||| ||  | || ||||| || 
Sbjct: 128 aatgccagggtccctattatcgtcactggtaacgatttctccacattgtatgctccactt 187

                                              
Query: 940 atccgtgatggtcgtatggagaagttctactgggc 974
           |||||||||||||||||||||||||||||||||||
Sbjct: 188 atccgtgatggtcgtatggagaagttctactgggc 222



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 1048 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 1097
            |||||||| || || | |||||| |||||||| || ||||||||||||||
Sbjct: 296  gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345

---

>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic sequence
          Length = 234

 Score =  101 bits (51), Expect = 9e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1616 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
            |||| ||||||||||||||  ||||||    ||||||||||| |||||||||||| ||||
Sbjct: 41   tgcctgtgccggaaggttgacccgaccctgttgccaagaacttcgacccaacggcgagga 100

                                               
Query: 1676 gcgacgacggcagctgcctttacaccttttaagca 1710
            |||||||||||||||||||||| | ||||||||||
Sbjct: 101  gcgacgacggcagctgcctttaaaacttttaagca 135

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 91.7 bits (46), Expect = 8e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                          
Query: 781    cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 840
              |||||||||||||||| |||  |||||| ||||||||||||||||||||||||   ||||
Sbjct: 445720 cagtacaccgtcaacacccaactggtgagcgccaccctgatgaacatcgccgacaacccc 445661

                            
Query: 841    accaacgtgcagct 854
              ||||||||||||||
Sbjct: 445660 accaacgtgcagct 445647

---

>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1231 aagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcag 1290
            |||||||||||||| ||  ||||||| |||||||||||||||||||| ||| | || || 
Sbjct: 3    aagctgctagagtatggaaacatgcttgtccaggagcaggacaatgtgaagagagttcaa 62

                                                                    
Query: 1291 cttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 1346
            || || ||||| ||| ||||||| |||||||| || ||||| ||| ||||| ||||
Sbjct: 63   ctggcagacacgtacttgagccaagcagctcttggagatgcaaacgaggattcgat 118

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 541   ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 600
             |||||||||||||| || |||||||||||||| |||||   ||||||||| || ||||||
Sbjct: 83958 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 83899

                        
Query: 601   atgggcatcaa 611
             |||||||||||
Sbjct: 83898 atgggcatcaa 83888



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 199/254 (78%)
 Strand = Plus / Minus

                                                                         
Query: 721   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 780
             ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 83103 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 83044

                                                                         
Query: 781   cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 840
             |||||||| || ||||| || ||||| || || || || |||||||| || |||  ||| 
Sbjct: 83043 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacattgctgataaccca 82984

                                                                         
Query: 841   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 900
             || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| | 
Sbjct: 82983 acaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcatt 82924

                                                                         
Query: 901   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 960
             || || ||||| ||||| || ||  | || |||||||| || ||||| ||||||||||||
Sbjct: 82923 gttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatggag 82864

                           
Query: 961   aagttctactgggc 974
             || ||||| |||||
Sbjct: 82863 aaattctattgggc 82850



 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 430   gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgt 485
             |||||||||||||  || || ||||| || |||||||| |||||||||||||||||
Sbjct: 84295 gacaacaccatggatggtttttacattgcacctgcttttatggacaagcttgttgt 84240



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 616   atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 665
             |||||||||||||| |||||||| || ||||| || || ||||| |||||
Sbjct: 83208 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 83159

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                           
Query: 1616    tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
               |||| ||||||||||||||||||||||    |||||| ||||  ||||||||||| | ||
Sbjct: 4541319 tgcctgtgccggaaggttgcaccgaccctgttgccaacaactttgacccaacggcgatga 4541378

                                                  
Query: 1676    gcgacgacggcagctgcctttacaccttttaagca 1710
               || ||||| ||| ||||||||||||||| ||||||
Sbjct: 4541379 gcaacgacagcatctgcctttacaccttctaagca 4541413

---

>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 1616  tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 1675
             |||| ||||||||||||||||||||||    |||||| ||||  ||||||||||| | ||
Sbjct: 84693 tgcctgtgccggaaggttgcaccgaccctgttgccaacaactttgacccaacggcgatga 84752

                                                
Query: 1676  gcgacgacggcagctgcctttacaccttttaagca 1710
             || ||||| ||| ||||||||||||||| ||||||
Sbjct: 84753 gcaacgacagcatctgcctttacaccttctaagca 84787

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                          
Query: 541    ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 600
              |||||||||||||| || |||||||||||||| |||||   ||||||||| || ||||||
Sbjct: 104933 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 104874

                         
Query: 601    atgggcatcaa 611
              |||||||||||
Sbjct: 104873 atgggcatcaa 104863



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 199/254 (78%)
 Strand = Plus / Minus

                                                                          
Query: 721    atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 780
              ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 104078 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 104019

                                                                          
Query: 781    cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 840
              |||||||| || ||||| || ||||| || || || || |||||||| || |||  ||| 
Sbjct: 104018 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacattgctgataaccca 103959

                                                                          
Query: 841    accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 900
              || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| | 
Sbjct: 103958 acaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcatt 103899

                                                                          
Query: 901    gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 960
              || || ||||| ||||| || ||  | || |||||||| || ||||| ||||||||||||
Sbjct: 103898 gttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatggag 103839

                            
Query: 961    aagttctactgggc 974
              || ||||| |||||
Sbjct: 103838 aaattctattgggc 103825



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 616    atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 665
              |||||||||||||| |||||||| || ||||| || || ||||| |||||
Sbjct: 104183 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 104134

---

>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence
          Length = 262

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 136/170 (80%)
 Strand = Plus / Plus

                                                                       
Query: 712 aagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggc 771
           ||||| ||||||||   |||||||||||| |||||||| || || || |||||  | || 
Sbjct: 19  aaggggaagatgtgtgtcctcttcatcaatgatcttgatgcaggggctggtagacttggt 78

                                                                       
Query: 772 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 831
           ||||| || || || || ||||| |||||||||||||| || ||||| |||||||| || 
Sbjct: 79  ggaactacacaatatacagtcaataaccagatggtgaatgcaacccttatgaacattgct 138

                                                             
Query: 832 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 881
           |||   || || || || ||||||||||| |||||||||||  |||||||
Sbjct: 139 gataatccaactaatgttcagctccctggtatgtacaacaaacaggagaa 188

---

>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase (AT1G73110) mRNA,
           complete cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 901 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 960
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 961 aagttctactgg 972
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 901 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 960
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924

                       
Query: 961 aagttctactgg 972
           ||||||||||||
Sbjct: 925 aagttctactgg 936

---

>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 901 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 960
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 961 aagttctactgg 972
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 901 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 960
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945

                       
Query: 961 aagttctactgg 972
           ||||||||||||
Sbjct: 946 aagttctactgg 957

---

>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 901 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 960
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932

                       
Query: 961 aagttctactgg 972
           ||||||||||||
Sbjct: 933 aagttctactgg 944

---

>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 901   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 960
             ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627

                         
Query: 961   aagttctactgg 972
             ||||||||||||
Sbjct: 97626 aagttctactgg 97615

---

>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 54.0 bits (27), Expect = 0.002
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 910 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 969
           ||||||||||| || || || ||||| ||||||||||| ||  | |||||||||||||||
Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995

              
Query: 970 tgg 972
           |||
Sbjct: 996 tgg 998

---

>gb|AC189500.1| Brassica rapa subsp. pekinensis clone KBrB086N06, complete sequence
          Length = 144247

 Score = 48.1 bits (24), Expect = 0.11
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                         
Query: 901   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 960
             ||||| || ||||||||||| | ||| || ||||| || |||||||| ||  | ||||||
Sbjct: 38545 gtcacagggaacgatttctccaggctatatgctccactcatccgtgaaggaagaatggag 38486

                         
Query: 961   aagttctactgg 972
             ||||||||||||
Sbjct: 38485 aagttctactgg 38474

---

>gb|CP000479.1| Mycobacterium avium 104, complete genome
          Length = 5475491

 Score = 46.1 bits (23), Expect = 0.45
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 293     ccgacgaccagcaggacatcacc 315
               |||||||||||||||||||||||
Sbjct: 3211670 ccgacgaccagcaggacatcacc 3211692

---

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 46.1 bits (23), Expect = 0.45
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 293     ccgacgaccagcaggacatcacc 315
               |||||||||||||||||||||||
Sbjct: 1452088 ccgacgaccagcaggacatcacc 1452066

---

>gb|CP000448.1| Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete genome
          Length = 2936195

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 230    cagcggagaacatcgacgagaagagg 255
              |||||||||||||| |||||||||||
Sbjct: 650324 cagcggagaacatcaacgagaagagg 650349

---

>gb|CP000394.1| Granulibacter bethesdensis CGDNIH1, complete genome
          Length = 2708355

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1148   ccggaatcgagaacattggcaa 1169
              ||||||||||||||||||||||
Sbjct: 749098 ccggaatcgagaacattggcaa 749077

---

>gb|CP000377.1| Silicibacter sp. TM1040, complete genome
          Length = 3200938

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 358     ggcgacggcacccacgaggccg 379
               ||||||||||||||||||||||
Sbjct: 1914383 ggcgacggcacccacgaggccg 1914362

---

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 335     actcgctcttccaggcgcccac 356
               ||||||||||||||||||||||
Sbjct: 2553524 actcgctcttccaggcgcccac 2553503

---

>gb|AC104980.5| Homo sapiens chromosome 8, clone RP11-281D17, complete sequence
          Length = 187226

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1437  ttatactttcagcaactacttt 1458
             ||||||||||||||||||||||
Sbjct: 36523 ttatactttcagcaactacttt 36502

---

>gb|AC105193.4| Homo sapiens chromosome 8, clone RP11-379M16, complete sequence
          Length = 171256

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1437   ttatactttcagcaactacttt 1458
              ||||||||||||||||||||||
Sbjct: 153659 ttatactttcagcaactacttt 153638

---

>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1309  agccaggcagctctgggtgatg 1330
             ||||||||||||||||||||||
Sbjct: 51254 agccaggcagctctgggtgatg 51275

---

>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 150    gaagaagctcaagaagcaggtg 171
              ||||||||||||||||||||||
Sbjct: 632957 gaagaagctcaagaagcaggtg 632978

---

>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence
          Length = 153155

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1784  ttaatatatctctaaatatatt 1805
             ||||||||||||||||||||||
Sbjct: 67963 ttaatatatctctaaatatatt 67942

---

>dbj|AP004289.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1844F2
          Length = 151991

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1437  ttatactttcagcaactacttt 1458
             ||||||||||||||||||||||
Sbjct: 34019 ttatactttcagcaactacttt 34040

---

>gb|DQ863313.1| Penicillium marneffei RAM2-like protein gene, complete cds
          Length = 1184

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1168 aagaggctggtgaactcgcgg 1188
            |||||||||||||||||||||
Sbjct: 1039 aagaggctggtgaactcgcgg 1059

---

>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence
          Length = 177245

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1783  gttaatatatctctaaatata 1803
             |||||||||||||||||||||
Sbjct: 12335 gttaatatatctctaaatata 12315

---

>gb|AC147148.2| Pan troglodytes BAC clone CH251-267E22 from Y, complete sequence
          Length = 151370

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1469   ttctttctcactttcttactt 1489
              |||||||||||||||||||||
Sbjct: 112924 ttctttctcactttcttactt 112944

---

>gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, complete sequence
          Length = 98660

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1783  gttaatatatctctaaatata 1803
             |||||||||||||||||||||
Sbjct: 66367 gttaatatatctctaaatata 66387

---

>gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, complete sequence
          Length = 152794

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      ggagcagcagcagtcattcat 22
              |||||||||||||||||||||
Sbjct: 150472 ggagcagcagcagtcattcat 150492

---

>gb|AC104302.2| Homo sapiens chromosome 3 clone RP11-379L20, complete sequence
          Length = 206872

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 2      ggagcagcagcagtcattcat 22
              |||||||||||||||||||||
Sbjct: 148118 ggagcagcagcagtcattcat 148098

---

>emb|CR701838.2|CNS0G4HM Tetraodon nigroviridis full-length cDNA
          Length = 929

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 78  cagcacagagatggctgctgc 98
           |||||||||||||||||||||
Sbjct: 531 cagcacagagatggctgctgc 511

---

>emb|CR686472.2|CNS0FSMS Tetraodon nigroviridis full-length cDNA
          Length = 939

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 78  cagcacagagatggctgctgc 98
           |||||||||||||||||||||
Sbjct: 541 cagcacagagatggctgctgc 521

---

>emb|CR681817.2|CNS0FP1H Tetraodon nigroviridis full-length cDNA
          Length = 992

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 78  cagcacagagatggctgctgc 98
           |||||||||||||||||||||
Sbjct: 595 cagcacagagatggctgctgc 575

---

>emb|CR680161.1|CNS0FNRH Tetraodon nigroviridis full-length cDNA
          Length = 1318

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 78  cagcacagagatggctgctgc 98
           |||||||||||||||||||||
Sbjct: 932 cagcacagagatggctgctgc 912

---

>emb|CR675309.2|CNS0FK1F Tetraodon nigroviridis full-length cDNA
          Length = 1006

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 78  cagcacagagatggctgctgc 98
           |||||||||||||||||||||
Sbjct: 609 cagcacagagatggctgctgc 589

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1714    cacttttaatatctgatgttt 1734
               |||||||||||||||||||||
Sbjct: 3040420 cacttttaatatctgatgttt 3040440

---

>dbj|BS000667.1| Pan troglodytes chromosome Y clone:PTBY-009K22, complete sequences
          Length = 118085

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1469   ttctttctcactttcttactt 1489
              |||||||||||||||||||||
Sbjct: 105798 ttctttctcactttcttactt 105818

---

>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1050 caagatcgtcgacaccttccc 1070
            |||||||||||||||||||||
Sbjct: 3673 caagatcgtcgacaccttccc 3653

---

>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence
          Length = 75381

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1388  acccaccatctcttgctgcat 1408
             |||||||||||||||||||||
Sbjct: 63550 acccaccatctcttgctgcat 63530

---

>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 593

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 901 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 959
           ||||| || ||||||||||| || || || |||| | ||||||||||| ||  | |||||
Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195

                        
Query: 960 gaagttctactgg 972
           |||||||||||||
Sbjct: 196 gaagttctactgg 208

---

>emb|BX649334.5| Zebrafish DNA sequence from clone DKEYP-6A3 in linkage group 22,
             complete sequence
          Length = 184977

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 9     cagcagtcattcatcactgatcaccagca 37
             |||||||||||| ||||| ||||||||||
Sbjct: 34983 cagcagtcattcttcacttatcaccagca 34955

---

>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1714   cacttttaatatctgatgttt 1734
              |||||||||||||||||||||
Sbjct: 114423 cacttttaatatctgatgttt 114403

---

>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence
          Length = 105452

 Score = 42.1 bits (21), Expect = 7.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1783 gttaatatatctctaaatata 1803
            |||||||||||||||||||||
Sbjct: 6197 gttaatatatctctaaatata 6217


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 294,243,772
Number of extensions: 15769887
Number of successful extensions: 302142
Number of sequences better than 10.0: 150
Number of HSP's gapped: 302018
Number of HSP's successfully gapped: 358
Length of query: 1829
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1806
Effective length of database: 18,503,978,556
Effective search space: 33418185272136
Effective search space used: 33418185272136
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

---