ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf46o04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK067498:Os02g0593500 | 853 | 0.0 | 2 | AK104702:Os02g0593500 | 676 | 0.0 | 3 | AK119831: | 34 | 0.48 | 4 | Os04g0633200:Os04g0633200 | 32 | 1.8 | 5 | AK108920:Os01g0111700 | 32 | 1.8 | 6 | AK105661:Os05g0395000 | 32 | 1.8 | 7 | AK101858:Os05g0395000 | 32 | 1.8 | 8 | AK072019:Os05g0395000 | 32 | 1.8 | 9 | Os12g0166000:Os12g0166000 | 32 | 2.4 | 10 | AK121431:Os11g0533500 | 30 | 5.3 | 11 | AK111487:Os05g0209000 | 30 | 5.3 | 12 | AK107635:Os09g0572500 | 30 | 5.3 | 13 | AK101247:Os09g0441900 | 30 | 5.3 | 14 | AK073680:Os03g0348900 | 30 | 5.3 | 15 | AK064987:Os11g0533500 | 30 | 5.3 | 16 | AK059950:Os03g0348900 | 30 | 5.3 | 17 | AK105402:Os05g0554000 | 30 | 6.9 | 18 | AK073902:Os05g0554000 | 30 | 6.9 | 19 | Os06g0674800:Os06g0674800 | 30 | 9.0 | 20 | AK120279:Os03g0841100 | 30 | 9.0 |
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>AK067498:Os02g0593500 | Length = 572 Score = 853 bits (2204), Expect = 0.0 Identities = 458/573 (79%), Positives = 482/573 (84%), Gaps = 8/573 (1%) Frame = +2 Query: 107 MSQSSPFFSIXXXXXXXXXXXXXXXXXXXXXXXQLPPTIHCFRL---AKVSPAKTLNSHL 277 MSQSSPFFS+ QLPP IH R A VSPAKTLNSHL Sbjct: 1 MSQSSPFFSVARAHAGAGGRAAAAALLLRHPVAQLPPRIHGLRYYPSAIVSPAKTLNSHL 60 Query: 278 ALPRATLSSFANADDDGSSAKPDASG---EQNGGSELSEMAKAFHISPRMAMSISVLIAF 448 +LP AT+SSFANAD+ GSS + DA+ EQNG SELSEMAKAFHISPRMAMSISV+IAF Sbjct: 61 SLPHATISSFANADN-GSSGQADATESEEEQNGESELSEMAKAFHISPRMAMSISVVIAF 119 Query: 449 AALTVPLAMRSLLFHGTTKMKVLAYLTLLSGFYMAWNIGANDVANAMGTSVGSGALTLRQ 628 AALTVPLAM+S++FHGT KMK LAYLTLLSGFYMAWNIGANDVANAMGTSVGSGALTLRQ Sbjct: 120 AALTVPLAMQSVVFHGTNKMKALAYLTLLSGFYMAWNIGANDVANAMGTSVGSGALTLRQ 179 Query: 629 AVLTAAVLEFSGAFLMGTHVTSTMQKGILVTSVFQGNDXXXXXXXXXXXXXXXTWLQVAS 808 AVLTAAVLEFSGAFLMGTHVTSTMQKGILV SVFQG D TWLQVAS Sbjct: 180 AVLTAAVLEFSGAFLMGTHVTSTMQKGILVASVFQGKDSLLFAGLLSSLAAAGTWLQVAS 239 Query: 809 SYGWPVSTTHCIVGAMVGFGLVYGGVNAVFWSSLARVSSSWIISPLMGAAVSFLVYKCIR 988 SYGWPVSTTHCIVGAMVGFG+V+GGVNAVFWSSLARVSSSW+ISPLMGAAVSF+VYK IR Sbjct: 240 SYGWPVSTTHCIVGAMVGFGIVFGGVNAVFWSSLARVSSSWVISPLMGAAVSFIVYKGIR 299 Query: 989 RFVYSXXXXXXXXXXXXXXXVFTGVTAISFAAFPLSKTFSIAVLQALVCGAIGAVFVSRA 1168 RFVYS VFTGVTAISFAAFPLSKTFSIA+LQAL CGAIGAV V+R Sbjct: 300 RFVYSAPNPGQAAAAAAPIAVFTGVTAISFAAFPLSKTFSIAILQALACGAIGAVIVNRV 359 Query: 1169 IKKQLGDLLSSEAEKIAIADNTDVQQGGF--DVAGPRGAQLQIVYGVFGYMQVLSACFMS 1342 I+KQLGDLLSSEAEKIA AD + QQ GF D+AGP GAQLQIVYGVFGYMQVLSACFMS Sbjct: 360 IQKQLGDLLSSEAEKIASADKANAQQVGFLSDIAGPTGAQLQIVYGVFGYMQVLSACFMS 419 Query: 1343 FAHGGNDVSNAIGPLAAALSLLQGVASSAEIVIPTEVLAWGGFGIVAGLAMWGYRVIATI 1522 FAHGGNDVSNAIGPLAAALS+LQGVASSAEIVIPTEVLAWGGFGIVAGL MWGYRVIATI Sbjct: 420 FAHGGNDVSNAIGPLAAALSILQGVASSAEIVIPTEVLAWGGFGIVAGLTMWGYRVIATI 479 Query: 1523 GKKITELTPTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGFARGLNRVRAETV 1702 GKKITELTPTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGFARGLNRVRAETV Sbjct: 480 GKKITELTPTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGFARGLNRVRAETV 539 Query: 1703 REIVVSWVVTIPVGALLSVVYTLILTKILKYFM 1801 REIV SW+VTIPVGA+LS+ YTL+ TKIL YFM Sbjct: 540 REIVASWLVTIPVGAVLSIFYTLLFTKILAYFM 572
>AK104702:Os02g0593500 | Length = 509 Score = 676 bits (1744), Expect = 0.0 Identities = 390/573 (68%), Positives = 420/573 (73%), Gaps = 8/573 (1%) Frame = +2 Query: 107 MSQSSPFFSIXXXXXXXXXXXXXXXXXXXXXXXQLPPTIHCFRL---AKVSPAKTLNSHL 277 MSQSSPFFS+ QLPP IH R A VSPAKTLNSHL Sbjct: 1 MSQSSPFFSVARAHAGAGGRAAAAALLLRHPVAQLPPRIHGLRYYPSAIVSPAKTLNSHL 60 Query: 278 ALPRATLSSFANADDDGSSAKPDASG---EQNGGSELSEMAKAFHISPRMAMSISVLIAF 448 +LP AT+SSFANAD+ GSS + DA+ EQNG SELSEMAKAFHISPRMAMSISV+IAF Sbjct: 61 SLPHATISSFANADN-GSSGQADATESEEEQNGESELSEMAKAFHISPRMAMSISVVIAF 119 Query: 449 AALTVPLAMRSLLFHGTTKMKVLAYLTLLSGFYMAWNIGANDVANAMGTSVGSGALTLRQ 628 AALTVPLAM+S++FHGT KMK LAYLTLLSGFYMAWNIGANDVANAMGTSVGSGALTLRQ Sbjct: 120 AALTVPLAMQSVVFHGTNKMKALAYLTLLSGFYMAWNIGANDVANAMGTSVGSGALTLRQ 179 Query: 629 AVLTAAVLEFSGAFLMGTHVTSTMQKGILVTSVFQGNDXXXXXXXXXXXXXXXTWLQVAS 808 AVLTAAVLEFSGAFLMGTHVTSTMQKGILV SVFQG D TWLQVAS Sbjct: 180 AVLTAAVLEFSGAFLMGTHVTSTMQKGILVASVFQGKDSLLFAGLLSSLAAAGTWLQVAS 239 Query: 809 SYGWPVSTTHCIVGAMVGFGLVYGGVNAVFWSSLARVSSSWIISPLMGAAVSFLVYKCIR 988 SYGWPVSTTHCIV GA V F + Sbjct: 240 SYGWPVSTTHCIV----------------------------------GAMVGFGI----- 260 Query: 989 RFVYSXXXXXXXXXXXXXXXVFTGVTAISFAAFPLSKTFSIAVLQALVCGAIGAVFVSRA 1168 VF GV A+ +++ L++ S V+ L+ GA + V + Sbjct: 261 --------------------VFGGVNAVFWSS--LARVSSSWVISPLM-GAAVSFIVYKG 297 Query: 1169 IKKQLGDLLSSEAEKIAIADNTDVQQGGF--DVAGPRGAQLQIVYGVFGYMQVLSACFMS 1342 I++ LGDLLSSEAEKIA AD + QQ GF D+AGP GAQLQIVYGVFGYMQVLSACFMS Sbjct: 298 IRR-LGDLLSSEAEKIASADKANAQQVGFLSDIAGPTGAQLQIVYGVFGYMQVLSACFMS 356 Query: 1343 FAHGGNDVSNAIGPLAAALSLLQGVASSAEIVIPTEVLAWGGFGIVAGLAMWGYRVIATI 1522 FAHGGNDVSNAIGPLAAALS+LQGVASSAEIVIPTEVLAWGGFGIVAGL MWGYRVIATI Sbjct: 357 FAHGGNDVSNAIGPLAAALSILQGVASSAEIVIPTEVLAWGGFGIVAGLTMWGYRVIATI 416 Query: 1523 GKKITELTPTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGFARGLNRVRAETV 1702 GKKITELTPTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGFARGLNRVRAETV Sbjct: 417 GKKITELTPTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGFARGLNRVRAETV 476 Query: 1703 REIVVSWVVTIPVGALLSVVYTLILTKILKYFM 1801 REIV SW+VTIPVGA+LS+ YTL+ TKIL YFM Sbjct: 477 REIVASWLVTIPVGAVLSIFYTLLFTKILAYFM 509
>AK119831: | Length = 610 Score = 33.9 bits (76), Expect = 0.48 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 6/85 (7%) Frame = +2 Query: 1298 GVFGYMQVLSACFMSFAHGGNDVSNAIGPLAAALSLLQGVASSAEI------VIPTEVLA 1459 G+ G F++ A G ++ AALS +G A++A I V+ T + A Sbjct: 308 GLLGANVATMGAFLALAPGAPAIAATCLAANAALSFAKGFATTAAIGGADMPVVITVLNA 367 Query: 1460 WGGFGIVAGLAMWGYRVIATIGKKI 1534 + GF +VAG M ++ ++G I Sbjct: 368 YSGFALVAGGFMLNSPILTSVGALI 392
>Os04g0633200:Os04g0633200 | Length = 887 Score = 32.0 bits (71), Expect = 1.8 Identities = 33/103 (32%), Positives = 41/103 (39%), Gaps = 3/103 (2%) Frame = +1 Query: 118 FSFLFHCPSTCWSRRASCGCRSPAPLPCRSAATYHSLLPSR*SVACQDTQLA---PGASA 288 FS +F PS R S GCR APL C + +T +P R V DT A GA+ Sbjct: 330 FSPMF--PSQWSMRETSGGCRRNAPLECGNGSTTDGFVPVR-GVKLPDTDNATVDTGATL 386 Query: 289 RHTVLLCKR***WLQCKTRCLGGAERRIRAVRDGKGIPYFTTD 417 C + C C+ A IR G G +T D Sbjct: 387 DECRARC-----FANCS--CVAYAAADIRGAGGGSGCVMWTGD 422
>AK108920:Os01g0111700 | Length = 175 Score = 32.0 bits (71), Expect = 1.8 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = -1 Query: 257 WQATL*RDGSSEW*VAAERQ-GNGAGERQPQLALLLQHVLGQWKRKEKIETWSGRSKNQG 81 W+ R GSS + AE G G G + QL L + G+ K+ +W+ RS QG Sbjct: 45 WKQQQQRSGSSLPQLKAEESAGGGGGASRKQLLATLSGIGGKAAAMAKMVSWNRRSSRQG 104 Query: 80 GSTE 69 S++ Sbjct: 105 CSSD 108
>AK105661:Os05g0395000 | Length = 612 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = +2 Query: 824 VSTTHCIVGAMVGFGLVY-GGVNAVFWSSLARVSS 925 VS H VG+ V F ++Y GG+N +FW +A + + Sbjct: 300 VSVDHRFVGSFVPFPVIYTGGINPLFWQPVAALGA 334
>AK101858:Os05g0395000 | Length = 612 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = +2 Query: 824 VSTTHCIVGAMVGFGLVY-GGVNAVFWSSLARVSS 925 VS H VG+ V F ++Y GG+N +FW +A + + Sbjct: 300 VSVDHRFVGSFVPFPVIYTGGINPLFWQPVAALGA 334
>AK072019:Os05g0395000 | Length = 612 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = +2 Query: 824 VSTTHCIVGAMVGFGLVY-GGVNAVFWSSLARVSS 925 VS H VG+ V F ++Y GG+N +FW +A + + Sbjct: 300 VSVDHRFVGSFVPFPVIYTGGINPLFWQPVAALGA 334
>Os12g0166000:Os12g0166000 | Length = 937 Score = 31.6 bits (70), Expect = 2.4 Identities = 26/98 (26%), Positives = 42/98 (42%) Frame = -3 Query: 1473 PKPPQARTSVGMTISALLATP*RRDKAAARGPMALETSLPP*ANDMKHADRTCM*PNTPY 1294 P + T G T + L +P AA+ P A TS+P + + + N+ Sbjct: 408 PFAAKPSTGFGSTSTTLFNSPFNNTSAASSSPFASTTSIP-----LFTQTSSSLFANSTP 462 Query: 1293 TICN*APLGPATSNPPC*TSVLSAIAIFSASEDSRSPS 1180 + +P G + SNP ++ LS + SA S SP+ Sbjct: 463 GFASSSPFGASLSNPSSFSTGLSLVNTQSAGLFSSSPA 500
>AK121431:Os11g0533500 | Length = 978 Score = 30.4 bits (67), Expect = 5.3 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Frame = +2 Query: 248 SPAKTL---NSHLALPRATLSSFANADDDGSSAKPDASGEQNGGSELSEMAKAF 400 SP+K L NS L P +++ N D S + G+ NGGS S+ A AF Sbjct: 914 SPSKDLAAINSRLNYPTRRINTRINFDMVSDSVVAGSLGQPNGGSASSDPAAAF 967
>AK111487:Os05g0209000 | Length = 195 Score = 30.4 bits (67), Expect = 5.3 Identities = 33/100 (33%), Positives = 38/100 (38%) Frame = +3 Query: 117 LLLSFPLPEHMLEQEGELRLPLSCSVALPLSCHLPFTASVSLKCRLPRHSTRTWRFRAPH 296 LLL +P H L+ P S + P S L T+S S R PR S R P Sbjct: 36 LLLLLVIPGHRLK-------PPSLPLLFP-SPPLASTSSSSSSTRPPRGS----RSSGPS 83 Query: 297 CPPLQTLMMMAPVQNQMPRGSRTEDPSCQRWQRHSIFHHG 416 P TL AP R S +RWQR H G Sbjct: 84 PSPTPTLRTAAPPSGARWRPSSHAASRRRRWQRRRWPHRG 123
>AK107635:Os09g0572500 | Length = 541 Score = 30.4 bits (67), Expect = 5.3 Identities = 33/138 (23%), Positives = 53/138 (38%), Gaps = 5/138 (3%) Frame = -3 Query: 969 RNETAAPISGEIIHDEDTLAKELQKTALTPPYTSPKPTIAPTIQWVVDTGQP*EEATCNH 790 R+ T++ IS T + + +PP +SP PT + + T P ++ Sbjct: 341 RSSTSSTISSSSASSSPTSSPSPSTASSSPPASSPAPTTSASPSTSPSTSPPPSPSSTPP 400 Query: 789 VP-AAAREDSNPAKSRESFPWKTDVTRMPFCMVLVTWVPIRKAPENSSTAAVSTACRRVK 613 P A A S+ + SR S P R C +P + +T ST+ + + Sbjct: 401 APRAPAISSSSGSSSRTSCPCTGPRPRSSACS-RPPAPTSGSSPTSEATPTPSTSSQLIP 459 Query: 612 APD----PTDVPMAFATS 571 P P P A A+S Sbjct: 460 PPGLGGRPPPAPAAQASS 477
>AK101247:Os09g0441900 | Length = 444 Score = 30.4 bits (67), Expect = 5.3 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 4/87 (4%) Frame = -2 Query: 1732 CDHPRDHNFTHSLCSDSVETSCKSHTHHCTNKCMCS----RYWQPKLRCKQYHRSGRKLC 1565 C PR N + S C D E CK + C CS +P C + C Sbjct: 131 CKRPRCLNCSCSSCCD--EPCCKPNCSACCAGSCCSPDCCSCCKPNCSCCK-----TPSC 183 Query: 1564 CEPPCGC*FGDFLANCCYDSITPHCKP 1484 C+P C C ++CC S CKP Sbjct: 184 CKPNCSC-SCPSCSSCCDTSC---CKP 206
>AK073680:Os03g0348900 | Length = 183 Score = 30.4 bits (67), Expect = 5.3 Identities = 16/53 (30%), Positives = 19/53 (35%) Frame = -2 Query: 1525 ANCCYDSITPHCKPCDNSKTTPSKDFSRYDYLSAACYALKKRQSCGQRPYGIG 1367 A CC D HC+ C N T + R+ S C Q Q Y G Sbjct: 29 APCCNDVF--HCRHCHNESTKDGHELDRHAVESVICLVCDTEQPVAQVCYNCG 79
>AK064987:Os11g0533500 | Length = 978 Score = 30.4 bits (67), Expect = 5.3 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Frame = +2 Query: 248 SPAKTL---NSHLALPRATLSSFANADDDGSSAKPDASGEQNGGSELSEMAKAF 400 SP+K L NS L P +++ N D S + G+ NGGS S+ A AF Sbjct: 914 SPSKDLAAINSRLNYPTRRINTRINFDMVSDSVVAGSLGQPNGGSASSDPAAAF 967
>AK059950:Os03g0348900 | Length = 260 Score = 30.4 bits (67), Expect = 5.3 Identities = 16/53 (30%), Positives = 19/53 (35%) Frame = -2 Query: 1525 ANCCYDSITPHCKPCDNSKTTPSKDFSRYDYLSAACYALKKRQSCGQRPYGIG 1367 A CC D HC+ C N T + R+ S C Q Q Y G Sbjct: 29 APCCNDVF--HCRHCHNESTKDGHELDRHAVESVICLVCDTEQPVAQVCYNCG 79
>AK105402:Os05g0554000 | Length = 306 Score = 30.0 bits (66), Expect = 6.9 Identities = 28/80 (35%), Positives = 40/80 (50%) Frame = +2 Query: 1547 PTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGFARGLNRVRAETVREIVVSWV 1726 P A + ASV F+ +G+ S TL G G A+ +++ +T R IV V Sbjct: 76 PLSASAIATSLASVSGFSLLVGMA-SGLETLCGQAYG---AKQYDKLGVQTYRAIVTLTV 131 Query: 1727 VTIPVGALLSVVYTLILTKI 1786 VTIP+ +LL V +LT I Sbjct: 132 VTIPI-SLLWVFIGKLLTLI 150
>AK073902:Os05g0554000 | Length = 408 Score = 30.0 bits (66), Expect = 6.9 Identities = 28/80 (35%), Positives = 40/80 (50%) Frame = +2 Query: 1547 PTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGFARGLNRVRAETVREIVVSWV 1726 P A + ASV F+ +G+ S TL G G A+ +++ +T R IV V Sbjct: 76 PLSASAIATSLASVSGFSLLVGMA-SGLETLCGQAYG---AKQYDKLGVQTYRAIVTLTV 131 Query: 1727 VTIPVGALLSVVYTLILTKI 1786 VTIP+ +LL V +LT I Sbjct: 132 VTIPI-SLLWVFIGKLLTLI 150
>Os06g0674800:Os06g0674800 | Length = 1018 Score = 29.6 bits (65), Expect = 9.0 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -2 Query: 622 ESQSTRSYRCPHGICHIIRSNIPCH 548 E+QS +C HG C + S++ CH Sbjct: 828 EAQSNEEMKCYHGSCQLSTSHVHCH 852
>AK120279:Os03g0841100 | Length = 971 Score = 29.6 bits (65), Expect = 9.0 Identities = 22/76 (28%), Positives = 33/76 (43%) Frame = +2 Query: 1367 SNAIGPLAAALSLLQGVASSAEIVIPTEVLAWGGFGIVAGLAMWGYRVIATIGKKITELT 1546 SN + P SL + + + PT +L +GG G V + RV+A KI E + Sbjct: 607 SNNVTPNTRIFSL-EDLEKATNNFDPTRILGYGGHGTVYKGILSDQRVVAIKRSKIVEQS 665 Query: 1547 PTRGFAAEFAAASVVL 1594 F E A S ++ Sbjct: 666 EIDQFVNEVAILSQII 681 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 67,037,042 Number of extensions: 1671525 Number of successful extensions: 5909 Number of sequences better than 10.0: 20 Number of HSP's gapped: 5890 Number of HSP's successfully gapped: 23 Length of query: 725 Length of database: 15,399,855 Length adjustment: 108 Effective length of query: 617 Effective length of database: 11,075,427 Effective search space: 6833538459 Effective search space used: 6833538459 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
