ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf46n10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 72 9e-09
2gb|DQ245859.1| Zea mays clone 21033 mRNA sequence 48 0.14
3emb|CR855159.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 48 0.14
4ref|NM_001059654.1| Oryza sativa (japonica cultivar-group) Os04g... 48 0.14
5gb|AY596597.1| Saccharum officinarum clone SCCCLR1C01H06, comple... 48 0.14
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.14
7emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,... 48 0.14
8emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4,... 48 0.14
9dbj|AK068497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.14
10gb|DQ244274.1| Zea mays clone 4073 mRNA sequence 46 0.54
11gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete seq... 46 0.54
12gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.54
13dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.54
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.54
15dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.54
16dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.54
17gb|AY107141.1| Zea mays PCO144549 mRNA sequence 46 0.54
18ref|NM_001071684.1| Oryza sativa (japonica cultivar-group) Os10g... 44 2.1
19ref|NM_001067472.1| Oryza sativa (japonica cultivar-group) Os08g... 44 2.1
20emb|CT009587.1| Triticum turgidum 44 2.1
21emb|AM111344.1| Plantago major partial mRNA for fimbriata-associ... 44 2.1
22emb|AM111343.1| Plantago major partial mRNA for fimbriata-associ... 44 2.1
23gb|AC117402.9| Homo sapiens 3 BAC RP11-553A10 (Roswell Park Canc... 44 2.1
24gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 geno... 44 2.1
25emb|CR626933.1| Triticum turgidum 44 2.1
26dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 2.1
27emb|AL136230.9| Human DNA sequence from clone RP1-95I21 on chrom... 44 2.1
28dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 2.1
29gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 2.1
30dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic D... 44 2.1
31gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 44 2.1
32dbj|AK066009.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 2.1
33dbj|AK060309.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 2.1
34emb|AL365317.22| Mouse DNA sequence from clone RP23-179K8 on chr... 44 2.1
35emb|CT829713.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 8.4
36emb|CT833150.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 8.4
37ref|NM_001073778.1| Oryza sativa (japonica cultivar-group) Os12g... 42 8.4
38ref|NM_001068701.1| Oryza sativa (japonica cultivar-group) Os08g... 42 8.4
39ref|NM_001064031.1| Oryza sativa (japonica cultivar-group) Os06g... 42 8.4
40ref|XM_001076672.1| PREDICTED: Rattus norvegicus asparagine-link... 42 8.4
41ref|XM_340750.3| PREDICTED: Rattus norvegicus asparagine-linked ... 42 8.4
42gb|AC131707.3| Mus musculus BAC clone RP24-127O2 from chromosome... 42 8.4
43gb|AC078984.23| Homo sapiens 12 RP11-34K24 (Roswell Park Cancer ... 42 8.4
44emb|Z50755.1|CER12H7 Caenorhabditis elegans Cosmid R12H7, comple... 42 8.4
45dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 8.4
46dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 8.4
47emb|BX045613.1|CNS097CX Single read from an extremity of a full-... 42 8.4
48emb|BX018650.1|CNS08MJY Single read from an extremity of a full-... 42 8.4
49emb|BX007473.1|CNS08DXH Single read from an extremity of a full-... 42 8.4
50dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic D... 42 8.4
51dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 8.4
52dbj|AP005968.3| Oryza sativa (japonica cultivar-group) genomic D... 42 8.4
53dbj|AK119870.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 8.4
54dbj|AK119646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 8.4
55gb|AC090286.16| Homo sapiens chromosome 17, clone RP11-28B23, co... 42 8.4
56dbj|AK105260.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 8.4
57dbj|AK066763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 8.4
58dbj|AK063130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 8.4
59dbj|AP001021.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 8.4
60gb|AC007967.3|AC007967 Homo sapiens clone NH0373F14, complete se... 42 8.4
61emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa... 42 8.4
62gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 42 8.4
63gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 42 8.4 
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506
 Score = 71.9 bits (36), Expect = 9e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                      
Query: 826    agtcgcgcccccagaagcccgtttttcgccggctctggcc 865
              ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 192472 agtcgcgcccccagaagcccgtttttcgccggctcgggcc 192433



 Score = 42.1 bits (21), Expect = 8.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 760    catctccagccgcgccctcaacaggccct 788
              ||||||||||||||||| |||||| ||||
Sbjct: 192542 catctccagccgcgcccccaacagaccct 192514
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>gb|DQ245859.1| Zea mays clone 21033 mRNA sequence
          Length = 821

 Score = 48.1 bits (24), Expect = 0.14
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 87  ggcggcggaggagggggcgacgaagacg 114
           ||||||||||||||||||||||| ||||
Sbjct: 91  ggcggcggaggagggggcgacgaggacg 64
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>emb|CR855159.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0525D09, complete
             sequence
          Length = 91911

 Score = 48.1 bits (24), Expect = 0.14
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 83    agatggcggcggaggagggggcga 106
             ||||||||||||||||||||||||
Sbjct: 71121 agatggcggcggaggagggggcga 71098
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>ref|NM_001059654.1| Oryza sativa (japonica cultivar-group) Os04g0482800 (Os04g0482800)
           mRNA, complete cds
          Length = 2484

 Score = 48.1 bits (24), Expect = 0.14
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 83  agatggcggcggaggagggggcga 106
           ||||||||||||||||||||||||
Sbjct: 148 agatggcggcggaggagggggcga 171
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>gb|AY596597.1| Saccharum officinarum clone SCCCLR1C01H06, complete sequence
          Length = 2436

 Score = 48.1 bits (24), Expect = 0.14
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 83  agatggcggcggaggagggggcga 106
           ||||||||||||||||||||||||
Sbjct: 172 agatggcggcggaggagggggcga 195
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.14
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 83       agatggcggcggaggagggggcga 106
                ||||||||||||||||||||||||
Sbjct: 24113350 agatggcggcggaggagggggcga 24113327
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>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
              complete sequence
          Length = 129498

 Score = 48.1 bits (24), Expect = 0.14
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 83     agatggcggcggaggagggggcga 106
              ||||||||||||||||||||||||
Sbjct: 110329 agatggcggcggaggagggggcga 110306
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>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15,
            complete sequence
          Length = 150864

 Score = 48.1 bits (24), Expect = 0.14
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 83   agatggcggcggaggagggggcga 106
            ||||||||||||||||||||||||
Sbjct: 2575 agatggcggcggaggagggggcga 2552
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>dbj|AK068497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155G23, full
           insert sequence
          Length = 2486

 Score = 48.1 bits (24), Expect = 0.14
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 83  agatggcggcggaggagggggcga 106
           ||||||||||||||||||||||||
Sbjct: 149 agatggcggcggaggagggggcga 172
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>gb|DQ244274.1| Zea mays clone 4073 mRNA sequence
          Length = 912

 Score = 46.1 bits (23), Expect = 0.54
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 81  aaagatggcggcggaggaggggg 103
           |||||||||||||||||||||||
Sbjct: 98  aaagatggcggcggaggaggggg 120
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>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence
          Length = 101101

 Score = 46.1 bits (23), Expect = 0.54
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 963   tcacgggtggcgcagtgaaggcgtggcgacg 993
             ||||||||||||||||||||||  |||||||
Sbjct: 95052 tcacgggtggcgcagtgaaggctgggcgacg 95022



 Score = 46.1 bits (23), Expect = 0.54
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 821   ggcctagtcgcgcccccagaagcccgtttttcgccggctctggccgaaatcagcg 875
             |||| ||||||| |||||  |||||  ||||||||||||| ||||||||| ||||
Sbjct: 95313 ggcccagtcgcgtccccaagagcccagttttcgccggctcgggccgaaattagcg 95259



 Score = 44.1 bits (22), Expect = 2.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 754   ttagatcatctccagccgcgccctcaacag 783
             ||||| ||||||||||||||||| ||||||
Sbjct: 27492 ttagagcatctccagccgcgcccccaacag 27521
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>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0007P22, complete sequence
          Length = 148068

 Score = 46.1 bits (23), Expect = 0.54
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 49    aaagaagacgacggcggcggcgg 71
             |||||||||||||||||||||||
Sbjct: 53615 aaagaagacgacggcggcggcgg 53637
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.54
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 49       aaagaagacgacggcggcggcgg 71
                |||||||||||||||||||||||
Sbjct: 22399201 aaagaagacgacggcggcggcgg 22399179
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.54
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                              
Query: 1386    gactacagatgtgtctatctgtttcggcgtgaaagggacgatcccca 1432
               ||||| |||||||||||| ||||  ||||||  ||||||||||||||
Sbjct: 1987250 gactatagatgtgtctatttgttcaggcgtggtagggacgatcccca 1987296



 Score = 44.1 bits (22), Expect = 2.1
 Identities = 44/50 (88%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                                 
Query: 1385    ggactacagatgtgtctatctgtttcggcgtgaaagggacgatccccaac 1434
               ||||||||||||||||||| ||||  ||||||| | |||| |||||||||
Sbjct: 1787862 ggactacagatgtgtctatttgttcaggcgtgata-ggaccatccccaac 1787814



 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 51       agaagacgacggcggcggcgg 71
                |||||||||||||||||||||
Sbjct: 24788909 agaagacgacggcggcggcgg 24788929
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>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0680F05
          Length = 185495

 Score = 46.1 bits (23), Expect = 0.54
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                             
Query: 1386   gactacagatgtgtctatctgtttcggcgtgaaagggacgatcccca 1432
              ||||| |||||||||||| ||||  ||||||  ||||||||||||||
Sbjct: 112448 gactatagatgtgtctatttgttcaggcgtggtagggacgatcccca 112494
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>dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0509D04
          Length = 140666

 Score = 46.1 bits (23), Expect = 0.54
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                             
Query: 1386   gactacagatgtgtctatctgtttcggcgtgaaagggacgatcccca 1432
              ||||| |||||||||||| ||||  ||||||  ||||||||||||||
Sbjct: 136285 gactatagatgtgtctatttgttcaggcgtggtagggacgatcccca 136331
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>gb|AY107141.1| Zea mays PCO144549 mRNA sequence
          Length = 1065

 Score = 46.1 bits (23), Expect = 0.54
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 81  aaagatggcggcggaggaggggg 103
           |||||||||||||||||||||||
Sbjct: 150 aaagatggcggcggaggaggggg 172
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>ref|NM_001071684.1| Oryza sativa (japonica cultivar-group) Os10g0532600 (Os10g0532600)
           mRNA, complete cds
          Length = 1060

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 53  aagacgacggcggcggcggggt 74
           ||||||||||||||||||||||
Sbjct: 308 aagacgacggcggcggcggggt 329
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>ref|NM_001067472.1| Oryza sativa (japonica cultivar-group) Os08g0134900 (Os08g0134900)
            mRNA, complete cds
          Length = 1481

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1386 gactacagatgtgtctatctgtttcggcgtgaaagggacgatccccaacacatcagctca 1445
            ||||||||||| |||||| ||||  ||||    |||||| ||||||||| ||||| ||||
Sbjct: 662  gactacagatgcgtctatttgttcaggcgaagcagggacaatccccaactcatcacctca 721

                      
Query: 1446 ccggatgata 1455
            ||||| ||||
Sbjct: 722  ccggaggata 731
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>emb|CT009587.1| Triticum turgidum
          Length = 229209

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 754    ttagatcatctccagccgcgccctcaacag 783
              ||||| ||||||||||||||||| ||||||
Sbjct: 111985 ttagagcatctccagccgcgcccccaacag 112014
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>emb|AM111344.1| Plantago major partial mRNA for fimbriata-associated protein (fap2
           gene)
          Length = 816

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 237 cggcaaaatcctctccaaggtc 258
           ||||||||||||||||||||||
Sbjct: 209 cggcaaaatcctctccaaggtc 230
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>emb|AM111343.1| Plantago major partial mRNA for fimbriata-associated protein (fap1
           gene)
          Length = 651

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 237 cggcaaaatcctctccaaggtc 258
           ||||||||||||||||||||||
Sbjct: 81  cggcaaaatcctctccaaggtc 102
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>gb|AC117402.9| Homo sapiens 3 BAC RP11-553A10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166999

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1790  tggaagctacaattgaaataaa 1811
             ||||||||||||||||||||||
Sbjct: 18468 tggaagctacaattgaaataaa 18489
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>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete
             sequence
          Length = 194361

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 53    aagacgacggcggcggcggggt 74
             ||||||||||||||||||||||
Sbjct: 73373 aagacgacggcggcggcggggt 73394
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>emb|CR626933.1| Triticum turgidum
          Length = 25216

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 754  ttagatcatctccagccgcgccctcaacag 783
            ||||| ||||||||||||||||| ||||||
Sbjct: 6789 ttagagcatctccagccgcgcccccaacag 6818
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 53       aagacgacggcggcggcggggt 74
                ||||||||||||||||||||||
Sbjct: 20195638 aagacgacggcggcggcggggt 20195659
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>emb|AL136230.9| Human DNA sequence from clone RP1-95I21 on chromosome 6, complete
             sequence
          Length = 120515

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1797  tacaattgaaataaatgttttgaagg 1822
             ||||||| ||||||||||||||||||
Sbjct: 89894 tacaatttaaataaatgttttgaagg 89869
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 313     gacgccgagttcgtccgcggcc 334
               ||||||||||||||||||||||
Sbjct: 2584859 gacgccgagttcgtccgcggcc 2584880
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 211     ggcgagcccatccgcgtggacg 232
               ||||||||||||||||||||||
Sbjct: 1339096 ggcgagcccatccgcgtggacg 1339075
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>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0009H02
          Length = 155388

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 44/50 (88%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                               
Query: 1385  ggactacagatgtgtctatctgtttcggcgtgaaagggacgatccccaac 1434
             ||||||||||||||||||| ||||  ||||||| | |||| |||||||||
Sbjct: 70223 ggactacagatgtgtctatttgttcaggcgtgata-ggaccatccccaac 70175
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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1133 cgaacggctggagatgctctta 1154
            ||||||||||||||||||||||
Sbjct: 8114 cgaacggctggagatgctctta 8093
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>dbj|AK066009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047E17, full
            insert sequence
          Length = 1481

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1386 gactacagatgtgtctatctgtttcggcgtgaaagggacgatccccaacacatcagctca 1445
            ||||||||||| |||||| ||||  ||||    |||||| ||||||||| ||||| ||||
Sbjct: 661  gactacagatgcgtctatttgttcaggcgaagcagggacaatccccaactcatcacctca 720

                      
Query: 1446 ccggatgata 1455
            ||||| ||||
Sbjct: 721  ccggaggata 730
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>dbj|AK060309.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B04, full
           insert sequence
          Length = 1060

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 53  aagacgacggcggcggcggggt 74
           ||||||||||||||||||||||
Sbjct: 308 aagacgacggcggcggcggggt 329
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>emb|AL365317.22| Mouse DNA sequence from clone RP23-179K8 on chromosome 1, complete
             sequence
          Length = 187131

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 728   agtattttcatgattgtcctgt 749
             ||||||||||||||||||||||
Sbjct: 84437 agtattttcatgattgtcctgt 84416
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>emb|CT829713.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA240D01, full
           insert sequence
          Length = 2035

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 51  agaagacgacggcggcggcgg 71
           |||||||||||||||||||||
Sbjct: 482 agaagacgacggcggcggcgg 502
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>emb|CT833150.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA002L06, full
           insert sequence
          Length = 927

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 91  gcggaggagggggcgacgaagacgt 115
           ||||||||||||| |||||||||||
Sbjct: 640 gcggaggagggggtgacgaagacgt 616
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>ref|NM_001073778.1| Oryza sativa (japonica cultivar-group) Os12g0610200 (Os12g0610200)
           mRNA, complete cds
          Length = 2080

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 51  agaagacgacggcggcggcgg 71
           |||||||||||||||||||||
Sbjct: 543 agaagacgacggcggcggcgg 563
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>ref|NM_001068701.1| Oryza sativa (japonica cultivar-group) Os08g0501900 (Os08g0501900)
           mRNA, partial cds
          Length = 632

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 51  agaagacgacggcggcggcgg 71
           |||||||||||||||||||||
Sbjct: 376 agaagacgacggcggcggcgg 396
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>ref|NM_001064031.1| Oryza sativa (japonica cultivar-group) Os06g0316100 (Os06g0316100)
           mRNA, complete cds
          Length = 1535

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 91  gcggaggagggggcgacgaagacgt 115
           ||||||||||||| |||||||||||
Sbjct: 561 gcggaggagggggtgacgaagacgt 537
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>ref|XM_001076672.1| PREDICTED: Rattus norvegicus asparagine-linked glycosylation 1
            homolog (yeast, beta-1,4-mannosyltransferase) (predicted)
            (Alg1_predicted), mRNA
          Length = 1784

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1839 gtagctgctctgactcctgga 1859
            |||||||||||||||||||||
Sbjct: 1371 gtagctgctctgactcctgga 1351
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>ref|XM_340750.3| PREDICTED: Rattus norvegicus asparagine-linked glycosylation 1
            homolog (yeast, beta-1,4-mannosyltransferase) (predicted)
            (Alg1_predicted), mRNA
          Length = 1784

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1839 gtagctgctctgactcctgga 1859
            |||||||||||||||||||||
Sbjct: 1371 gtagctgctctgactcctgga 1351
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>gb|AC131707.3| Mus musculus BAC clone RP24-127O2 from chromosome 16, complete sequence
          Length = 174804

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1215  ttgcctttatttgcagctagt 1235
             |||||||||||||||||||||
Sbjct: 60231 ttgcctttatttgcagctagt 60251
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>gb|AC078984.23| Homo sapiens 12 RP11-34K24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 26564

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1301  caatgttgtttccttgaaggt 1321
             |||||||||||||||||||||
Sbjct: 13294 caatgttgtttccttgaaggt 13274
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>emb|Z50755.1|CER12H7 Caenorhabditis elegans Cosmid R12H7, complete sequence
          Length = 20975

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1802 ttgaaataaatgttttgaagg 1822
            |||||||||||||||||||||
Sbjct: 8666 ttgaaataaatgttttgaagg 8686
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 51       agaagacgacggcggcggcgg 71
                |||||||||||||||||||||
Sbjct: 25803685 agaagacgacggcggcggcgg 25803705
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 91       gcggaggagggggcgacgaagacgt 115
                ||||||||||||| |||||||||||
Sbjct: 12040885 gcggaggagggggtgacgaagacgt 12040861
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>emb|BX045613.1|CNS097CX Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC19DD11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 782

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 51  agaagacgacggcggcggcgg 71
           |||||||||||||||||||||
Sbjct: 214 agaagacgacggcggcggcgg 194
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>emb|BX018650.1|CNS08MJY Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA28BD01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 500

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 51  agaagacgacggcggcggcgg 71
           |||||||||||||||||||||
Sbjct: 209 agaagacgacggcggcggcgg 189
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>emb|BX007473.1|CNS08DXH Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA12BH06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 696

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 51  agaagacgacggcggcggcgg 71
           |||||||||||||||||||||
Sbjct: 223 agaagacgacggcggcggcgg 203
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>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1345_D02
          Length = 159613

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    agaagacgacggcggcggcgg 71
             |||||||||||||||||||||
Sbjct: 89710 agaagacgacggcggcggcgg 89730
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 84      gatggcggcggaggagggggc 104
               |||||||||||||||||||||
Sbjct: 8941262 gatggcggcggaggagggggc 8941242
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>dbj|AP005968.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1156C07
          Length = 182153

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 91    gcggaggagggggcgacgaagacgt 115
             ||||||||||||| |||||||||||
Sbjct: 89748 gcggaggagggggtgacgaagacgt 89724
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>dbj|AK119870.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-D01, full
            insert sequence
          Length = 2684

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 884  gcgcggtcatcgtcctcatcgcctc 908
            |||||||||||||| ||||||||||
Sbjct: 1194 gcgcggtcatcgtcgtcatcgcctc 1170
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>dbj|AK119646.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-G06, full
           insert sequence
          Length = 1497

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 91  gcggaggagggggcgacgaagacgt 115
           ||||||||||||| |||||||||||
Sbjct: 595 gcggaggagggggtgacgaagacgt 571
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>gb|AC090286.16| Homo sapiens chromosome 17, clone RP11-28B23, complete sequence
          Length = 168956

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1302   aatgttgtttccttgaaggta 1322
              |||||||||||||||||||||
Sbjct: 102443 aatgttgtttccttgaaggta 102423
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>dbj|AK105260.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-A01, full
           insert sequence
          Length = 1537

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 91  gcggaggagggggcgacgaagacgt 115
           ||||||||||||| |||||||||||
Sbjct: 561 gcggaggagggggtgacgaagacgt 537
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>dbj|AK066763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074J19, full
           insert sequence
          Length = 2081

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 51  agaagacgacggcggcggcgg 71
           |||||||||||||||||||||
Sbjct: 544 agaagacgacggcggcggcgg 564
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>dbj|AK063130.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-F06, full
           insert sequence
          Length = 632

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 51  agaagacgacggcggcggcgg 71
           |||||||||||||||||||||
Sbjct: 257 agaagacgacggcggcggcgg 237
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>dbj|AP001021.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-793A3, complete
             sequence
          Length = 222596

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 1597  atcccgggaagcagtgtttattttgagat 1625
             ||||| ||||||| |||||||||||||||
Sbjct: 79518 atccctggaagcaatgtttattttgagat 79490



 Score = 42.1 bits (21), Expect = 8.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 1488  atcccgggaagcagtgtttattttgagat 1516
             ||||| ||||||| |||||||||||||||
Sbjct: 79518 atccctggaagcaatgtttattttgagat 79490
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>gb|AC007967.3|AC007967 Homo sapiens clone NH0373F14, complete sequence
          Length = 187547

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1875  atcattctatatgaagcagtg 1895
             |||||||||||||||||||||
Sbjct: 10802 atcattctatatgaagcagtg 10822
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>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    agaagacgacggcggcggcgg 71
             |||||||||||||||||||||
Sbjct: 25136 agaagacgacggcggcggcgg 25156
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>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH001H24, complete sequence
          Length = 118144

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1798  acaattgaaataaatgttttgaagg 1822
             ||||| |||||||||||||||||||
Sbjct: 79462 acaatcgaaataaatgttttgaagg 79486
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 42.1 bits (21), Expect = 8.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 833    cccccagaagcccgtttttcg 853
              |||||||||||||||||||||
Sbjct: 630534 cccccagaagcccgtttttcg 630554


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 344,456,595
Number of extensions: 17589748
Number of successful extensions: 98598
Number of sequences better than 10.0: 63
Number of HSP's gapped: 98598
Number of HSP's successfully gapped: 69
Length of query: 2205
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2182
Effective length of database: 18,503,978,556
Effective search space: 40375681209192
Effective search space used: 40375681209192
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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