ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf43n05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK059404.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-B09, full insert sequence Length = 694 Score = 137 bits (69), Expect = 1e-28 Identities = 123/141 (87%) Strand = Plus / Plus Query: 1237 agaaaatgcagcatatgccaggaggagtactctggtggtgaggaggtggggaacatggcg 1296 |||||||||||||||||||||||||| || || | ||||||||||||||| || |||| Sbjct: 435 agaaaatgcagcatatgccaggaggaatattcagatggtgaggaggtgggcaagatggtc 494 Query: 1297 tgtaagcactactaccacatcacctgcatacagcactggctccggcagaagaactggtgc 1356 || || || ||||||||| || |||||||| || ||||||||||||||||||||||||| Sbjct: 495 tgcaaacattactaccacttctcctgcataaagaactggctccggcagaagaactggtgt 554 Query: 1357 cccatctgcaaatccgtcgcc 1377 ||||| || |||||||||||| Sbjct: 555 cccatttgtaaatccgtcgcc 575 Score = 109 bits (55), Expect = 3e-20 Identities = 148/179 (82%) Strand = Plus / Plus Query: 1003 gggtactggcgcttcgacgtcgaaggcagtgaagagctggagaactacttcatgctcagt 1062 ||||||||||||||| | | ||||| ||||||||||| |||||||||||||| ||| | Sbjct: 201 gggtactggcgcttcaatatggaagggagtgaagagcttgagaactacttcatattcaat 260 Query: 1063 gatcggcaccgggcgatgaggatggacatcgacggcatgtcctacgaggaattgctcgcg 1122 |||||| || | | |||||| |||||||| ||||||||||| || ||||||||||| || Sbjct: 261 gatcggtacagagggatgagaatggacattgacggcatgtcttatgaggaattgctagca 320 Query: 1123 ttgggtgaccggatcggcacggtgaacaccgggctttcagaggacgcgctgtacaagtg 1181 ||||| || | || ||||| || | ||| || |||||||| |||||||||| |||||| Sbjct: 321 ttgggagatagaattggcaccgtaagcactggcctttcagaagacgcgctgtccaagtg 379
>dbj|AK100301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077P18, full insert sequence Length = 1493 Score = 135 bits (68), Expect = 6e-28 Identities = 122/140 (87%) Strand = Plus / Plus Query: 1237 agaaaatgcagcatatgccaggaggagtactctggtggtgaggaggtggggaacatggcg 1296 |||||||||||||||||||||||||| || || | ||||||||||||||| || |||| Sbjct: 1104 agaaaatgcagcatatgccaggaggaatattcagatggtgaggaggtgggcaagatggtc 1163 Query: 1297 tgtaagcactactaccacatcacctgcatacagcactggctccggcagaagaactggtgc 1356 || || || ||||||||| || |||||||| || ||||||||||||||||||||||||| Sbjct: 1164 tgcaaacattactaccacttctcctgcataaagaactggctccggcagaagaactggtgt 1223 Query: 1357 cccatctgcaaatccgtcgc 1376 ||||| || ||||||||||| Sbjct: 1224 cccatttgtaaatccgtcgc 1243 Score = 109 bits (55), Expect = 3e-20 Identities = 148/179 (82%) Strand = Plus / Plus Query: 1003 gggtactggcgcttcgacgtcgaaggcagtgaagagctggagaactacttcatgctcagt 1062 ||||||||||||||| | | ||||| ||||||||||| |||||||||||||| ||| | Sbjct: 870 gggtactggcgcttcaatatggaaggaagtgaagagcttgagaactacttcatattcaat 929 Query: 1063 gatcggcaccgggcgatgaggatggacatcgacggcatgtcctacgaggaattgctcgcg 1122 |||||| || | | |||||| |||||||| ||||||||||| || ||||||||||| || Sbjct: 930 gatcggtacagagggatgagaatggacattgacggcatgtcttatgaggaattgctagca 989 Query: 1123 ttgggtgaccggatcggcacggtgaacaccgggctttcagaggacgcgctgtacaagtg 1181 ||||| || | || ||||| || | ||| || |||||||| |||||||||| |||||| Sbjct: 990 ttgggagatagaattggcaccgtaagcactggcctttcagaagacgcgctgtccaagtg 1048 Score = 56.0 bits (28), Expect = 4e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 267 catggacgaacacatgggacggcggacggtgggcggcctcctcttcaccaaagggggctc 326 |||||| || ||||||||| | ||||| || || ||||| ||||||||||| |||||||| Sbjct: 155 catggatgatcacatgggaagacggacagttggtggccttctcttcaccaaggggggctc 214 Query: 327 catcctcctcttcagggaggacag 350 || || |||||||| || ||||| Sbjct: 215 aattcttctcttcagagaagacag 238 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 760 gcagcgtcccggataaggaaggcagacgaaggcgaaaatgcaggag 805 ||||| ||||| |||||||||||||| ||||| | ||||||||||| Sbjct: 633 gcagcttcccgaataaggaaggcagatgaaggtgcaaatgcaggag 678 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Plus Query: 451 gcagcaacagcagccaaggaagca 474 |||||||||||||||||||||||| Sbjct: 324 gcagcaacagcagccaaggaagca 347
>dbj|AK072200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160D07, full insert sequence Length = 1363 Score = 135 bits (68), Expect = 6e-28 Identities = 122/140 (87%) Strand = Plus / Plus Query: 1237 agaaaatgcagcatatgccaggaggagtactctggtggtgaggaggtggggaacatggcg 1296 |||||||||||||||||||||||||| || || | ||||||||||||||| || |||| Sbjct: 1104 agaaaatgcagcatatgccaggaggaatattcagatggtgaggaggtgggcaagatggtc 1163 Query: 1297 tgtaagcactactaccacatcacctgcatacagcactggctccggcagaagaactggtgc 1356 || || || ||||||||| || |||||||| || ||||||||||||||||||||||||| Sbjct: 1164 tgcaaacattactaccacttctcctgcataaagaactggctccggcagaagaactggtgt 1223 Query: 1357 cccatctgcaaatccgtcgc 1376 ||||| || ||||||||||| Sbjct: 1224 cccatttgtaaatccgtcgc 1243 Score = 109 bits (55), Expect = 3e-20 Identities = 148/179 (82%) Strand = Plus / Plus Query: 1003 gggtactggcgcttcgacgtcgaaggcagtgaagagctggagaactacttcatgctcagt 1062 ||||||||||||||| | | ||||| ||||||||||| |||||||||||||| ||| | Sbjct: 870 gggtactggcgcttcaatatggaaggaagtgaagagcttgagaactacttcatattcaat 929 Query: 1063 gatcggcaccgggcgatgaggatggacatcgacggcatgtcctacgaggaattgctcgcg 1122 |||||| || | | |||||| |||||||| ||||||||||| || ||||||||||| || Sbjct: 930 gatcggtacagagggatgagaatggacattgacggcatgtcttatgaggaattgctagca 989 Query: 1123 ttgggtgaccggatcggcacggtgaacaccgggctttcagaggacgcgctgtacaagtg 1181 ||||| || | || ||||| || | ||| || |||||||| |||||||||| |||||| Sbjct: 990 ttgggagatagaattggcaccgtaagcactggcctttcagaagacgcgctgtccaagtg 1048 Score = 56.0 bits (28), Expect = 4e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 267 catggacgaacacatgggacggcggacggtgggcggcctcctcttcaccaaagggggctc 326 |||||| || ||||||||| | ||||| || || ||||| ||||||||||| |||||||| Sbjct: 155 catggatgatcacatgggaagacggacagttggtggccttctcttcaccaaggggggctc 214 Query: 327 catcctcctcttcagggaggacag 350 || || |||||||| || ||||| Sbjct: 215 aattcttctcttcagagaagacag 238 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 760 gcagcgtcccggataaggaaggcagacgaaggcgaaaatgcaggag 805 ||||| ||||| |||||||||||||| ||||| | ||||||||||| Sbjct: 633 gcagcttcccgaataaggaaggcagatgaaggtgcaaatgcaggag 678 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Plus Query: 451 gcagcaacagcagccaaggaagca 474 |||||||||||||||||||||||| Sbjct: 324 gcagcaacagcagccaaggaagca 347
>ref|NM_001060314.1| Oryza sativa (japonica cultivar-group) Os04g0603200 (Os04g0603200) mRNA, complete cds Length = 1490 Score = 113 bits (57), Expect = 2e-21 Identities = 121/141 (85%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 1237 agaaaatgcagcatatgccagg-aggagtactctggtggtgaggaggtggggaacatggc 1295 |||||||||||||||||||||| | || || || | ||||||||||||||| || |||| Sbjct: 1102 agaaaatgcagcatatgccaggcaagaatattcagatggtgaggaggtgggcaagatggt 1161 Query: 1296 gtgtaagcactactaccacatcacctgcatacagcactggctccggcagaagaactggtg 1355 || || || ||||||||| || |||||||| || ||||||||||||||||||||||||| Sbjct: 1162 ctgcaaacattactaccacttctcctgcataaagaactggctccggcagaagaactggtg 1221 Query: 1356 ccccatctgcaaatccgtcgc 1376 ||||| || ||||||||||| Sbjct: 1222 tcccatttgtaaatccgtcgc 1242 Score = 109 bits (55), Expect = 3e-20 Identities = 148/179 (82%) Strand = Plus / Plus Query: 1003 gggtactggcgcttcgacgtcgaaggcagtgaagagctggagaactacttcatgctcagt 1062 ||||||||||||||| | | ||||| ||||||||||| |||||||||||||| ||| | Sbjct: 868 gggtactggcgcttcaatatggaaggaagtgaagagcttgagaactacttcatattcaat 927 Query: 1063 gatcggcaccgggcgatgaggatggacatcgacggcatgtcctacgaggaattgctcgcg 1122 |||||| || | | |||||| |||||||| ||||||||||| || ||||||||||| || Sbjct: 928 gatcggtacagagggatgagaatggacattgacggcatgtcttatgaggaattgctagca 987 Query: 1123 ttgggtgaccggatcggcacggtgaacaccgggctttcagaggacgcgctgtacaagtg 1181 ||||| || | || ||||| || | ||| || |||||||| |||||||||| |||||| Sbjct: 988 ttgggagatagaattggcaccgtaagcactggcctttcagaagacgcgctgtccaagtg 1046 Score = 56.0 bits (28), Expect = 4e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 267 catggacgaacacatgggacggcggacggtgggcggcctcctcttcaccaaagggggctc 326 |||||| || ||||||||| | ||||| || || ||||| ||||||||||| |||||||| Sbjct: 153 catggatgatcacatgggaagacggacagttggtggccttctcttcaccaaggggggctc 212 Query: 327 catcctcctcttcagggaggacag 350 || || |||||||| || ||||| Sbjct: 213 aattcttctcttcagagaagacag 236 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 760 gcagcgtcccggataaggaaggcagacgaaggcgaaaatgcaggag 805 ||||| ||||| |||||||||||||| ||||| | ||||||||||| Sbjct: 631 gcagcttcccgaataaggaaggcagatgaaggtgcaaatgcaggag 676 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Plus Query: 451 gcagcaacagcagccaaggaagca 474 |||||||||||||||||||||||| Sbjct: 322 gcagcaacagcagccaaggaagca 345
>emb|CR855138.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0118P15, complete sequence Length = 92002 Score = 99.6 bits (50), Expect = 3e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 1255 caggaggagtactctggtggtgaggaggtggggaacatggcgtgtaagcactactaccac 1314 |||||||| || || | ||||||||||||||| || |||| || || || ||||||||| Sbjct: 7604 caggaggaatattcagatggtgaggaggtgggcaagatggtctgcaaacattactaccac 7545 Query: 1315 atcacctgcatacagcactggctccggcagaagaactggtgccccatctgcaaatccgtc 1374 || |||||||| || ||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 7544 ttctcctgcataaagaactggctccggcagaagaactggtgtcccatttgtaaatccgtc 7485 Query: 1375 gc 1376 || Sbjct: 7484 gc 7483 Score = 56.0 bits (28), Expect = 4e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 267 catggacgaacacatgggacggcggacggtgggcggcctcctcttcaccaaagggggctc 326 |||||| || ||||||||| | ||||| || || ||||| ||||||||||| |||||||| Sbjct: 8967 catggatgatcacatgggaagacggacagttggtggccttctcttcaccaaggggggctc 8908 Query: 327 catcctcctcttcagggaggacag 350 || || |||||||| || ||||| Sbjct: 8907 aattcttctcttcagagaagacag 8884 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Minus Query: 1037 agctggagaactacttcatgctcagtgatcggcaccgggcgatgaggatggacatcgacg 1096 |||| |||||||||||||| ||| ||||||| || | | |||||| |||||||| |||| Sbjct: 8070 agcttgagaactacttcatattcaatgatcggtacagagggatgagaatggacattgacg 8011 Query: 1097 gcatgtc 1103 ||||||| Sbjct: 8010 gcatgtc 8004 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 79 cggcatctatatattagaactccactggttcttct 113 |||||| ||||||| |||||||||||||||||||| Sbjct: 10617 cggcatgtatatataagaactccactggttcttct 10583 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 760 gcagcgtcccggataaggaaggcagacgaaggcgaaaatgcaggag 805 ||||| ||||| |||||||||||||| ||||| | ||||||||||| Sbjct: 8489 gcagcttcccgaataaggaaggcagatgaaggtgcaaatgcaggag 8444 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 451 gcagcaacagcagccaaggaagca 474 |||||||||||||||||||||||| Sbjct: 8798 gcagcaacagcagccaaggaagca 8775 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1237 agaaaatgcagcatatgccagg 1258 |||||||||||||||||||||| Sbjct: 7720 agaaaatgcagcatatgccagg 7699
>ref|NM_001060315.1| Oryza sativa (japonica cultivar-group) Os04g0603100 (Os04g0603100) mRNA, complete cds Length = 2339 Score = 99.6 bits (50), Expect = 3e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 1255 caggaggagtactctggtggtgaggaggtggggaacatggcgtgtaagcactactaccac 1314 |||||||| || || | ||||||||||||||| || |||| || || || ||||||||| Sbjct: 713 caggaggaatattcagatggtgaggaggtgggcaagatggtctgcaaacattactaccac 654 Query: 1315 atcacctgcatacagcactggctccggcagaagaactggtgccccatctgcaaatccgtc 1374 || |||||||| || ||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 653 ttctcctgcataaagaactggctccggcagaagaactggtgtcccatttgtaaatccgtc 594 Query: 1375 gc 1376 || Sbjct: 593 gc 592 Score = 56.0 bits (28), Expect = 4e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 267 catggacgaacacatgggacggcggacggtgggcggcctcctcttcaccaaagggggctc 326 |||||| || ||||||||| | ||||| || || ||||| ||||||||||| |||||||| Sbjct: 2076 catggatgatcacatgggaagacggacagttggtggccttctcttcaccaaggggggctc 2017 Query: 327 catcctcctcttcagggaggacag 350 || || |||||||| || ||||| Sbjct: 2016 aattcttctcttcagagaagacag 1993 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Minus Query: 1037 agctggagaactacttcatgctcagtgatcggcaccgggcgatgaggatggacatcgacg 1096 |||| |||||||||||||| ||| ||||||| || | | |||||| |||||||| |||| Sbjct: 1179 agcttgagaactacttcatattcaatgatcggtacagagggatgagaatggacattgacg 1120 Query: 1097 gcatgtc 1103 ||||||| Sbjct: 1119 gcatgtc 1113 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 760 gcagcgtcccggataaggaaggcagacgaaggcgaaaatgcaggag 805 ||||| ||||| |||||||||||||| ||||| | ||||||||||| Sbjct: 1598 gcagcttcccgaataaggaaggcagatgaaggtgcaaatgcaggag 1553 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 451 gcagcaacagcagccaaggaagca 474 |||||||||||||||||||||||| Sbjct: 1907 gcagcaacagcagccaaggaagca 1884 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1237 agaaaatgcagcatatgccagg 1258 |||||||||||||||||||||| Sbjct: 829 agaaaatgcagcatatgccagg 808
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 99.6 bits (50), Expect = 3e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 1255 caggaggagtactctggtggtgaggaggtggggaacatggcgtgtaagcactactaccac 1314 |||||||| || || | ||||||||||||||| || |||| || || || ||||||||| Sbjct: 30473853 caggaggaatattcagatggtgaggaggtgggcaagatggtctgcaaacattactaccac 30473794 Query: 1315 atcacctgcatacagcactggctccggcagaagaactggtgccccatctgcaaatccgtc 1374 || |||||||| || ||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 30473793 ttctcctgcataaagaactggctccggcagaagaactggtgtcccatttgtaaatccgtc 30473734 Query: 1375 gc 1376 || Sbjct: 30473733 gc 30473732 Score = 56.0 bits (28), Expect = 4e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 267 catggacgaacacatgggacggcggacggtgggcggcctcctcttcaccaaagggggctc 326 |||||| || ||||||||| | ||||| || || ||||| ||||||||||| |||||||| Sbjct: 30475216 catggatgatcacatgggaagacggacagttggtggccttctcttcaccaaggggggctc 30475157 Query: 327 catcctcctcttcagggaggacag 350 || || |||||||| || ||||| Sbjct: 30475156 aattcttctcttcagagaagacag 30475133 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Minus Query: 1037 agctggagaactacttcatgctcagtgatcggcaccgggcgatgaggatggacatcgacg 1096 |||| |||||||||||||| ||| ||||||| || | | |||||| |||||||| |||| Sbjct: 30474319 agcttgagaactacttcatattcaatgatcggtacagagggatgagaatggacattgacg 30474260 Query: 1097 gcatgtc 1103 ||||||| Sbjct: 30474259 gcatgtc 30474253 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 79 cggcatctatatattagaactccactggttcttct 113 |||||| ||||||| |||||||||||||||||||| Sbjct: 30476866 cggcatgtatatataagaactccactggttcttct 30476832 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 760 gcagcgtcccggataaggaaggcagacgaaggcgaaaatgcaggag 805 ||||| ||||| |||||||||||||| ||||| | ||||||||||| Sbjct: 30474738 gcagcttcccgaataaggaaggcagatgaaggtgcaaatgcaggag 30474693 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 451 gcagcaacagcagccaaggaagca 474 |||||||||||||||||||||||| Sbjct: 30475047 gcagcaacagcagccaaggaagca 30475024 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1237 agaaaatgcagcatatgccagg 1258 |||||||||||||||||||||| Sbjct: 30473969 agaaaatgcagcatatgccagg 30473948 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 665 tgagcagctcgtcgtcgtcgtccgg 689 ||||||||||||||||| ||||||| Sbjct: 25020763 tgagcagctcgtcgtcggcgtccgg 25020787
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 99.6 bits (50), Expect = 3e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 1255 caggaggagtactctggtggtgaggaggtggggaacatggcgtgtaagcactactaccac 1314 |||||||| || || | ||||||||||||||| || |||| || || || ||||||||| Sbjct: 107230 caggaggaatattcagatggtgaggaggtgggcaagatggtctgcaaacattactaccac 107171 Query: 1315 atcacctgcatacagcactggctccggcagaagaactggtgccccatctgcaaatccgtc 1374 || |||||||| || ||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 107170 ttctcctgcataaagaactggctccggcagaagaactggtgtcccatttgtaaatccgtc 107111 Query: 1375 gc 1376 || Sbjct: 107110 gc 107109 Score = 56.0 bits (28), Expect = 4e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 267 catggacgaacacatgggacggcggacggtgggcggcctcctcttcaccaaagggggctc 326 |||||| || ||||||||| | ||||| || || ||||| ||||||||||| |||||||| Sbjct: 108593 catggatgatcacatgggaagacggacagttggtggccttctcttcaccaaggggggctc 108534 Query: 327 catcctcctcttcagggaggacag 350 || || |||||||| || ||||| Sbjct: 108533 aattcttctcttcagagaagacag 108510 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Minus Query: 1037 agctggagaactacttcatgctcagtgatcggcaccgggcgatgaggatggacatcgacg 1096 |||| |||||||||||||| ||| ||||||| || | | |||||| |||||||| |||| Sbjct: 107696 agcttgagaactacttcatattcaatgatcggtacagagggatgagaatggacattgacg 107637 Query: 1097 gcatgtc 1103 ||||||| Sbjct: 107636 gcatgtc 107630 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 79 cggcatctatatattagaactccactggttcttct 113 |||||| ||||||| |||||||||||||||||||| Sbjct: 110243 cggcatgtatatataagaactccactggttcttct 110209 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 760 gcagcgtcccggataaggaaggcagacgaaggcgaaaatgcaggag 805 ||||| ||||| |||||||||||||| ||||| | ||||||||||| Sbjct: 108115 gcagcttcccgaataaggaaggcagatgaaggtgcaaatgcaggag 108070 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 451 gcagcaacagcagccaaggaagca 474 |||||||||||||||||||||||| Sbjct: 108424 gcagcaacagcagccaaggaagca 108401 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1237 agaaaatgcagcatatgccagg 1258 |||||||||||||||||||||| Sbjct: 107346 agaaaatgcagcatatgccagg 107325
>dbj|AK073515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F16, full insert sequence Length = 2340 Score = 99.6 bits (50), Expect = 3e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 1255 caggaggagtactctggtggtgaggaggtggggaacatggcgtgtaagcactactaccac 1314 |||||||| || || | ||||||||||||||| || |||| || || || ||||||||| Sbjct: 714 caggaggaatattcagatggtgaggaggtgggcaagatggtctgcaaacattactaccac 655 Query: 1315 atcacctgcatacagcactggctccggcagaagaactggtgccccatctgcaaatccgtc 1374 || |||||||| || ||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 654 ttctcctgcataaagaactggctccggcagaagaactggtgtcccatttgtaaatccgtc 595 Query: 1375 gc 1376 || Sbjct: 594 gc 593 Score = 56.0 bits (28), Expect = 4e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 267 catggacgaacacatgggacggcggacggtgggcggcctcctcttcaccaaagggggctc 326 |||||| || ||||||||| | ||||| || || ||||| ||||||||||| |||||||| Sbjct: 2077 catggatgatcacatgggaagacggacagttggtggccttctcttcaccaaggggggctc 2018 Query: 327 catcctcctcttcagggaggacag 350 || || |||||||| || ||||| Sbjct: 2017 aattcttctcttcagagaagacag 1994 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Minus Query: 1037 agctggagaactacttcatgctcagtgatcggcaccgggcgatgaggatggacatcgacg 1096 |||| |||||||||||||| ||| ||||||| || | | |||||| |||||||| |||| Sbjct: 1180 agcttgagaactacttcatattcaatgatcggtacagagggatgagaatggacattgacg 1121 Query: 1097 gcatgtc 1103 ||||||| Sbjct: 1120 gcatgtc 1114 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 760 gcagcgtcccggataaggaaggcagacgaaggcgaaaatgcaggag 805 ||||| ||||| |||||||||||||| ||||| | ||||||||||| Sbjct: 1599 gcagcttcccgaataaggaaggcagatgaaggtgcaaatgcaggag 1554 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 451 gcagcaacagcagccaaggaagca 474 |||||||||||||||||||||||| Sbjct: 1908 gcagcaacagcagccaaggaagca 1885 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1237 agaaaatgcagcatatgccagg 1258 |||||||||||||||||||||| Sbjct: 830 agaaaatgcagcatatgccagg 809
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 61.9 bits (31), Expect = 7e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1333 tggctccggcagaagaactggtgccccatctgcaaatccgtcg 1375 ||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 8577465 tggcttcggcaaaagaattggtgccccatctgcaaatccgtcg 8577507
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 61.9 bits (31), Expect = 7e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1333 tggctccggcagaagaactggtgccccatctgcaaatccgtcg 1375 ||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 89376 tggcttcggcaaaagaattggtgccccatctgcaaatccgtcg 89418
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 61.9 bits (31), Expect = 7e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1333 tggctccggcagaagaactggtgccccatctgcaaatccgtcg 1375 ||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 107008 tggcttcggcaaaagaattggtgccccatctgcaaatccgtcg 107050
>ref|NM_001060316.1| Oryza sativa (japonica cultivar-group) Os04g0603300 (Os04g0603300) mRNA, complete cds Length = 2082 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 79 cggcatctatatattagaactccactggttcttct 113 |||||| ||||||| |||||||||||||||||||| Sbjct: 720 cggcatgtatatataagaactccactggttcttct 686
>ref|NM_001052438.1| Oryza sativa (japonica cultivar-group) Os02g0150700 (Os02g0150700) mRNA, complete cds Length = 2126 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1240 aaatgcagcatatgccaggaggagtac 1266 ||||||||||||||||||||||||||| Sbjct: 1842 aaatgcagcatatgccaggaggagtac 1868 Score = 42.1 bits (21), Expect = 6.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1320 ctgcatacagcactggctccggcagaagaactggtgccccatctgcaaa 1368 |||||| || || |||||| |||||||||||||||| || || |||||| Sbjct: 1922 ctgcattcaccagtggctcaggcagaagaactggtgtccaatatgcaaa 1970
>dbj|AK120070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003N07, full insert sequence Length = 2128 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1240 aaatgcagcatatgccaggaggagtac 1266 ||||||||||||||||||||||||||| Sbjct: 1843 aaatgcagcatatgccaggaggagtac 1869 Score = 42.1 bits (21), Expect = 6.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1320 ctgcatacagcactggctccggcagaagaactggtgccccatctgcaaa 1368 |||||| || || |||||| |||||||||||||||| || || |||||| Sbjct: 1923 ctgcattcaccagtggctcaggcagaagaactggtgtccaatatgcaaa 1971
>dbj|AK106704.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E07, full insert sequence Length = 2083 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 79 cggcatctatatattagaactccactggttcttct 113 |||||| ||||||| |||||||||||||||||||| Sbjct: 720 cggcatgtatatataagaactccactggttcttct 686
>gb|AC189393.1| Brassica rapa subsp. pekinensis clone KBrB054O10, complete sequence Length = 156199 Score = 50.1 bits (25), Expect = 0.026 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1344 gaagaactggtgccccatctgcaaa 1368 ||||||||||||||||||||||||| Sbjct: 16007 gaagaactggtgccccatctgcaaa 15983
>gb|AC113473.20| Mus musculus chromosome 1, clone RP23-280F6, complete sequence Length = 221025 Score = 50.1 bits (25), Expect = 0.026 Identities = 25/25 (100%) Strand = Plus / Plus Query: 119 ctggctccctccctccctctcccca 143 ||||||||||||||||||||||||| Sbjct: 212935 ctggctccctccctccctctcccca 212959
>gb|AC098570.7| Mus musculus chromosome 1, clone RP23-278N11, complete sequence Length = 193097 Score = 50.1 bits (25), Expect = 0.026 Identities = 25/25 (100%) Strand = Plus / Minus Query: 119 ctggctccctccctccctctcccca 143 ||||||||||||||||||||||||| Sbjct: 144805 ctggctccctccctccctctcccca 144781
>dbj|AK147297.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1010A19 product:RECS1 protein (Responsive to centrifugal force and shear stress gene 1 protein), full insert sequence Length = 11013 Score = 50.1 bits (25), Expect = 0.026 Identities = 25/25 (100%) Strand = Plus / Minus Query: 119 ctggctccctccctccctctcccca 143 ||||||||||||||||||||||||| Sbjct: 645 ctggctccctccctccctctcccca 621
>dbj|AK010778.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410125D13 product:unclassifiable, full insert sequence Length = 892 Score = 50.1 bits (25), Expect = 0.026 Identities = 25/25 (100%) Strand = Plus / Plus Query: 119 ctggctccctccctccctctcccca 143 ||||||||||||||||||||||||| Sbjct: 40 ctggctccctccctccctctcccca 64
>ref|XM_001174538.1| PREDICTED: Pan troglodytes hypothetical protein LOC750517 (LOC750517), mRNA Length = 1524 Score = 48.1 bits (24), Expect = 0.10 Identities = 27/28 (96%) Strand = Plus / Plus Query: 287 ggcggacggtgggcggcctcctcttcac 314 ||||||||||||||| |||||||||||| Sbjct: 558 ggcggacggtgggcgccctcctcttcac 585 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 290 ggacggtgggcggcctcctcttcac 314 |||||||||||| |||||||||||| Sbjct: 725 ggacggtgggcgccctcctcttcac 749
>gb|AC026950.15| Homo sapiens chromosome 8, clone RP11-555E9, complete sequence Length = 165051 Score = 48.1 bits (24), Expect = 0.10 Identities = 27/28 (96%) Strand = Plus / Minus Query: 287 ggcggacggtgggcggcctcctcttcac 314 ||||||||||||||| |||||||||||| Sbjct: 94299 ggcggacggtgggcgccctcctcttcac 94272 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 290 ggacggtgggcggcctcctcttcac 314 |||||||||||| |||||||||||| Sbjct: 94255 ggacggtgggcgccctcctcttcac 94231 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 ggtgggcggcctcctcttcac 314 ||||||||||||||||||||| Sbjct: 94496 ggtgggcggcctcctcttcac 94476
>gb|AC163746.5| Mus musculus BAC clone RP23-394B5 from chromosome 17, complete sequence Length = 199852 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 123 ctccctccctccctctccccatc 145 ||||||||||||||||||||||| Sbjct: 138332 ctccctccctccctctccccatc 138354
>gb|AC132083.3| Mus musculus BAC clone RP24-540G23 from chromosome 5, complete sequence Length = 158764 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 123 ctccctccctccctctccccatc 145 ||||||||||||||||||||||| Sbjct: 35187 ctccctccctccctctccccatc 35209
>gb|AC123940.4| Mus musculus BAC clone RP23-440M11 from chromosome 12, complete sequence Length = 197665 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctccccatc 145 ||||||||||||||||||||||| Sbjct: 79014 ctccctccctccctctccccatc 78992
>gb|AC127327.4| Mus musculus BAC clone RP23-254M18 from 5, complete sequence Length = 198433 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctccccatc 145 ||||||||||||||||||||||| Sbjct: 165439 ctccctccctccctctccccatc 165417
>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence Length = 244237 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctccccatc 145 ||||||||||||||||||||||| Sbjct: 178830 ctccctccctccctctccccatc 178808
>emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in linkage group 7, complete sequence Length = 154034 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1463 tattcttttttctattcttttct 1485 ||||||||||||||||||||||| Sbjct: 76943 tattcttttttctattcttttct 76921
>emb|CR382328.14| Mouse DNA sequence from clone RP23-315J18 on chromosome X, complete sequence Length = 215381 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctccccatc 145 ||||||||||||||||||||||| Sbjct: 86570 ctccctccctccctctccccatc 86548
>emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, complete sequence Length = 163121 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1463 tattcttttttctattcttttct 1485 ||||||||||||||||||||||| Sbjct: 91891 tattcttttttctattcttttct 91869
>ref|NM_172736.3| Mus musculus leukocyte receptor cluster (LRC) member 8 (Leng8), mRNA Length = 5094 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 ccctggctccctccctccctctcccc 142 ||||| |||||||||||||||||||| Sbjct: 4988 ccctgcctccctccctccctctcccc 5013
>emb|CR388195.7| Zebrafish DNA sequence from clone CH211-98N17 in linkage group 7, complete sequence Length = 193210 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1310 accacatcacctgcatacagca 1331 |||||||||||||||||||||| Sbjct: 95398 accacatcacctgcatacagca 95377
>dbj|AK242652.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090026G08, full insert sequence Length = 4046 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 436 agccacagggaagcagcagcaa 457 |||||||||||||||||||||| Sbjct: 3700 agccacagggaagcagcagcaa 3721
>ref|NM_001074993.1| Oryza sativa (japonica cultivar-group) Os11g0682600 (Os11g0682600) mRNA, complete cds Length = 1989 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 436 agccacagggaagcagcagcaa 457 |||||||||||||||||||||| Sbjct: 491 agccacagggaagcagcagcaa 512
>ref|XR_024722.1| PREDICTED: Pan troglodytes similar to ATRN (ATRN), mRNA Length = 8660 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 439 cacagggaagcagcagcaacagcagc 464 |||||||||||||||||| ||||||| Sbjct: 336 cacagggaagcagcagcagcagcagc 311
>ref|XM_001139579.1| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 1 (LOC459053), mRNA Length = 3022 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1649 agcagcagcaacagcagccaag 1670
>ref|XM_001139664.1| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 2 (LOC459053), mRNA Length = 3565 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1649 agcagcagcaacagcagccaag 1670
>ref|XM_001139753.1| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 3 (LOC459053), mRNA Length = 3488 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1649 agcagcagcaacagcagccaag 1670
>ref|XM_001140262.1| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 5 (LOC459053), mRNA Length = 5935 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1367 agcagcagcaacagcagccaag 1388
>ref|XM_515319.2| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 12 (LOC459053), mRNA Length = 6306 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1738 agcagcagcaacagcagccaag 1759
>ref|XM_001140088.1| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 4 (LOC459053), mRNA Length = 6136 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1562 agcagcagcaacagcagccaag 1583
>ref|XM_001140429.1| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 7 (LOC459053), mRNA Length = 5980 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1649 agcagcagcaacagcagccaag 1670
>ref|XM_001140348.1| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 6 (LOC459053), mRNA Length = 6223 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1655 agcagcagcaacagcagccaag 1676
>ref|XM_001140758.1| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 11 (LOC459053), mRNA Length = 6684 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 2116 agcagcagcaacagcagccaag 2137
>ref|XM_001140678.1| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 10 (LOC459053), mRNA Length = 6217 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1649 agcagcagcaacagcagccaag 1670
>ref|XM_001140592.1| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 9 (LOC459053), mRNA Length = 6535 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1967 agcagcagcaacagcagccaag 1988
>ref|XM_001140509.1| PREDICTED: Pan troglodytes similar to Pum2 protein, transcript variant 8 (LOC459053), mRNA Length = 6169 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1601 agcagcagcaacagcagccaag 1622
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 13023654 agcagcagcaacagcagccaag 13023633
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 441 cagggaagcagcagcaacagca 462 |||||||||||||||||||||| Sbjct: 11362588 cagggaagcagcagcaacagca 11362567 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 7473362 agcagcagcaacagcagccaa 7473342
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 791 gcgaaaatgcaggaggtgctcgcagg 816 |||||||||||||| ||||||||||| Sbjct: 22655725 gcgaaaatgcaggatgtgctcgcagg 22655700 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 aagcagcagcaacagcagcca 466 ||||||||||||||||||||| Sbjct: 14248302 aagcagcagcaacagcagcca 14248282
>ref|XM_001095426.1| PREDICTED: Macaca mulatta similar to pumilio homolog 2, transcript variant 1 (LOC701782), mRNA Length = 6125 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1798 agcagcagcaacagcagccaag 1819
>ref|XM_001095963.1| PREDICTED: Macaca mulatta similar to pumilio homolog 2, transcript variant 4 (LOC701782), mRNA Length = 6671 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 2107 agcagcagcaacagcagccaag 2128
>ref|XM_001095854.1| PREDICTED: Macaca mulatta similar to pumilio homolog 2, transcript variant 3 (LOC701782), mRNA Length = 6132 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1568 agcagcagcaacagcagccaag 1589
>ref|XM_001095741.1| PREDICTED: Macaca mulatta similar to pumilio homolog 2, transcript variant 2 (LOC701782), mRNA Length = 6362 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1798 agcagcagcaacagcagccaag 1819
>gb|AC136987.12| Mus musculus chromosome 16, clone RP24-129J16, complete sequence Length = 156302 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaaggaag 472 |||||||||||||||| ||||||||| Sbjct: 7119 agcagcagcaacagcatccaaggaag 7094
>gb|BC042658.1| Mus musculus leukocyte receptor cluster (LRC) member 8, mRNA (cDNA clone MGC:39050 IMAGE:5365041), complete cds Length = 5151 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 ccctggctccctccctccctctcccc 142 ||||| |||||||||||||||||||| Sbjct: 4976 ccctgcctccctccctccctctcccc 5001
>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0064H09, complete sequence Length = 146742 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 agccacagggaagcagcagcaa 457 |||||||||||||||||||||| Sbjct: 33289 agccacagggaagcagcagcaa 33268
>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0082P17, complete sequence Length = 157539 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 agccacagggaagcagcagcaa 457 |||||||||||||||||||||| Sbjct: 140907 agccacagggaagcagcagcaa 140886
>gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, complete sequence Length = 202156 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctctcccc 142 ||||| |||||||||||||||||||| Sbjct: 53673 ccctgcctccctccctccctctcccc 53648
>gb|BC034448.1| Mus musculus leukocyte receptor cluster (LRC) member 8, mRNA (cDNA clone IMAGE:4948279) Length = 3847 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 ccctggctccctccctccctctcccc 142 ||||| |||||||||||||||||||| Sbjct: 3712 ccctgcctccctccctccctctcccc 3737
>gb|BC041775.1| Mus musculus leukocyte receptor cluster (LRC) member 8, mRNA (cDNA clone IMAGE:4164123), complete cds Length = 5639 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 ccctggctccctccctccctctcccc 142 ||||| |||||||||||||||||||| Sbjct: 5493 ccctgcctccctccctccctctcccc 5518
>gb|AC134331.2| Mus musculus BAC clone RP24-344O12 from chromosome 19, complete sequence Length = 155342 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 116 cccctggctccctccctccctctccc 141 |||||| ||||||||||||||||||| Sbjct: 109707 cccctgtctccctccctccctctccc 109682
>gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosome 7, complete sequence Length = 205352 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 693 gttcagtgccagttcttctggtggtg 718 |||| ||||||||||||||||||||| Sbjct: 46216 gttctgtgccagttcttctggtggtg 46191
>ref|NM_135755.1| Drosophila melanogaster CG9932-RA (CG9932), mRNA Length = 7168 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 6185 agcagcagcaacagcagccaag 6206
>dbj|AK093847.1| Homo sapiens cDNA FLJ36528 fis, clone TRACH2004039, weakly similar to MATERNAL PUMILIO PROTEIN Length = 3595 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1647 agcagcagcaacagcagccaag 1668
>dbj|AB225667.1| Aspergillus oryzae cDNA, contig sequence: AoEST2522 Length = 1041 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 455 caacagcagccaaggaagcagc 476 |||||||||||||||||||||| Sbjct: 696 caacagcagccaaggaagcagc 675
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 455 caacagcagccaaggaagcagc 476 |||||||||||||||||||||| Sbjct: 3599076 caacagcagccaaggaagcagc 3599097
>gb|AF541923.1| Homo sapiens prostate apoptosis response protein PAR-4 gene, promoter region, 5'UTR and partial cds Length = 2007 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctc 137 |||||||||||||||||||||| Sbjct: 1192 cccctggctccctccctccctc 1213
>dbj|AK134559.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330413C21 product:Hypothetical zinc finger C-x8-C-x5-C-x3-H type containing protein (Fragment) homolog [Mus musculus], full insert sequence Length = 1579 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctctcccc 142 ||||| |||||||||||||||||||| Sbjct: 1427 ccctgcctccctccctccctctcccc 1402
>gb|BC028858.1| Mus musculus cDNA clone IMAGE:4018673 Length = 894 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 ccctggctccctccctccctctcccc 142 ||||| |||||||||||||||||||| Sbjct: 766 ccctgcctccctccctccctctcccc 791
>gb|AY300794.1| Homo sapiens PRKC, apoptosis, WT1, regulator (PAWR) gene, complete cds Length = 100636 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctc 137 |||||||||||||||||||||| Sbjct: 364 cccctggctccctccctccctc 385
>gb|AF503628.1| Homo sapiens prostate apoptosis response protein PAR-4 gene, promoter region, 5'UTR and partial cds Length = 5935 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctc 137 |||||||||||||||||||||| Sbjct: 4932 cccctggctccctccctccctc 4953
>gb|AC101941.11| Mus musculus chromosome 7, clone RP24-112F21, complete sequence Length = 157117 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctctcccc 142 ||||| |||||||||||||||||||| Sbjct: 125440 ccctgcctccctccctccctctcccc 125415
>gb|BC066768.1| Mus musculus leukocyte receptor cluster (LRC) member 8, mRNA (cDNA clone MGC:66549 IMAGE:6407146), complete cds Length = 5112 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 ccctggctccctccctccctctcccc 142 ||||| |||||||||||||||||||| Sbjct: 4979 ccctgcctccctccctccctctcccc 5004
>dbj|AK147019.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920088G24 product:Hypothetical zinc finger C-x8-C-x5-C-x3-H type containing protein, full insert sequence Length = 2460 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctctcccc 142 ||||| |||||||||||||||||||| Sbjct: 2308 ccctgcctccctccctccctctcccc 2283
>gb|AY118834.1| Drosophila melanogaster GM02023 full insert cDNA Length = 2849 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1848 agcagcagcaacagcagccaag 1869
>gb|AC073569.26| Homo sapiens 12 BAC RP11-530C5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177734 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 116 cccctggctccctccctccctc 137 |||||||||||||||||||||| Sbjct: 40777 cccctggctccctccctccctc 40756
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 agccacagggaagcagcagcaa 457 |||||||||||||||||||||| Sbjct: 26730344 agccacagggaagcagcagcaa 26730323
>gb|AC074191.3| Homo sapiens chromosome 11 clone RP11-502G22, complete sequence Length = 179357 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1238 gaaaatgcagcatatgccagga 1259 |||||||||||||||||||||| Sbjct: 75186 gaaaatgcagcatatgccagga 75165
>emb|AL807742.7| Human DNA sequence from clone RP11-274G22 on chromosome X, complete sequence Length = 172919 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1464 attcttttttctattcttttct 1485 |||||||||||||||||||||| Sbjct: 23809 attcttttttctattcttttct 23788
>emb|BX883044.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 3/11 Length = 340493 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaaggaagcagc 476 ||||||||||||||||||| ||| |||||| Sbjct: 337339 agcagcagcaacagcagcccaggtagcagc 337368
>gb|AC008343.4|AC008343 Drosophila melanogaster, chromosome 2R, region 51F-52A, BAC clone BACR03D24, complete sequence Length = 158402 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 441 cagggaagcagcagcaacagca 462 |||||||||||||||||||||| Sbjct: 125684 cagggaagcagcagcaacagca 125663
>gb|AC010214.7|AC010214 Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone BACR27F17, complete sequence Length = 174036 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 161281 agcagcagcaacagcagccaag 161302
>gb|AC009981.6|AC009981 Drosophila melanogaster, chromosome 3R, region 97C-97D, BAC clone BACR24O14, complete sequence Length = 170356 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 791 gcgaaaatgcaggaggtgctcgcagg 816 |||||||||||||| ||||||||||| Sbjct: 88524 gcgaaaatgcaggatgtgctcgcagg 88499
>gb|AC007041.3| Homo sapiens BAC clone RP11-327N17 from 2, complete sequence Length = 173397 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 46792 agcagcagcaacagcagccaag 46771
>gb|AF272350.1| Homo sapiens translational repressor pumilio (PUM2) mRNA, partial cds Length = 4397 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1196 agcagcagcaacagcagccaag 1217
>gb|BC112048.1| Homo sapiens pumilio homolog 2 (Drosophila), mRNA (cDNA clone MGC:138253 IMAGE:8327516), complete cds Length = 3256 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1549 agcagcagcaacagcagccaag 1570
>gb|BC112046.1| Homo sapiens pumilio homolog 2 (Drosophila), mRNA (cDNA clone MGC:138251 IMAGE:8327514), complete cds Length = 3256 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1549 agcagcagcaacagcagccaag 1570
>dbj|AB108448.1| Homo sapiens Par-4 gene for prostate apoptosis response-4, complete cds Length = 2007 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctc 137 |||||||||||||||||||||| Sbjct: 1192 cccctggctccctccctccctc 1213
>emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 in linkage group 7, complete sequence Length = 182186 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1310 accacatcacctgcatacagca 1331 |||||||||||||||||||||| Sbjct: 72816 accacatcacctgcatacagca 72837
>ref|NM_015317.1| Homo sapiens pumilio homolog 2 (Drosophila) (PUM2), mRNA gb|AF315591.1| Homo sapiens Pumilio 2 (PUMH2) mRNA, complete cds Length = 6111 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1546 agcagcagcaacagcagccaag 1567
>gb|U56854.1|RNU56854 Rattus norvegicus 21-hydroxylase alternatively spliced mRNA, inactive form containing 3 introns Length = 2183 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaaggaagcagc 476 ||||||||||||||||||| ||| |||||| Sbjct: 41 agcagcagcaacagcagcccaggtagcagc 12
>ref|NM_057101.1| Rattus norvegicus cytochrome P450, subfamily 21A, polypeptide 1 (Cyp21a1), mRNA gb|U56853.1|RNU56853 Rattus norvegicus 21-hydroxylase mRNA, complete cds Length = 1964 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaaggaagcagc 476 ||||||||||||||||||| ||| |||||| Sbjct: 41 agcagcagcaacagcagcccaggtagcagc 12
>emb|AJ556110.1|HSA556110 Homo sapiens PAR-4 gene for prostate apoptosis response-4 Length = 2007 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctc 137 |||||||||||||||||||||| Sbjct: 1192 cccctggctccctccctccctc 1213
>gb|AC132312.4| Mus musculus BAC clone RP24-298A20 from 12, complete sequence Length = 177464 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctccccat 144 |||||||||||||||||||||| Sbjct: 151136 ctccctccctccctctccccat 151115
>gb|AC132354.2| Mus musculus BAC clone RP24-112H7 from 12, complete sequence Length = 180298 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctccccat 144 |||||||||||||||||||||| Sbjct: 47866 ctccctccctccctctccccat 47845
>gb|AC124180.5| Mus musculus BAC clone RP23-200I16 from 16, complete sequence Length = 199422 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctccc 141 |||||| ||||||||||||||||||| Sbjct: 130542 cccctgcctccctccctccctctccc 130567
>gb|AC140198.4| Mus musculus BAC clone RP23-255C4 from 16, complete sequence Length = 198007 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaaggaag 472 |||||||||||||||| ||||||||| Sbjct: 186759 agcagcagcaacagcatccaaggaag 186734
>emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on chromosome 11, complete sequence Length = 205405 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1438 ctgaaatgtctagacacaagat 1459 |||||||||||||||||||||| Sbjct: 98250 ctgaaatgtctagacacaagat 98271
>dbj|D87078.3| Homo sapiens mRNA for KIAA0235 protein, partial cds Length = 6040 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaag 468 |||||||||||||||||||||| Sbjct: 1523 agcagcagcaacagcagccaag 1544
>gb|AC189713.8| Canis Familiaris chromosome 8, clone XX-412J10, complete sequence Length = 201757 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1465 ttcttttttctattcttttct 1485 ||||||||||||||||||||| Sbjct: 60893 ttcttttttctattcttttct 60913
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 580 gcggctccaggtgccgggcgtgacc 604 |||||| |||||||||||||||||| Sbjct: 301426 gcggctgcaggtgccgggcgtgacc 301450
>emb|CR855212.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0311C03, complete sequence Length = 82144 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 665 tgagcagctcgtcgtcgtcgtccgg 689 ||||||||||||||||| ||||||| Sbjct: 50422 tgagcagctcgtcgtcggcgtccgg 50446
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 638 caaggaagcggtcgctggccaggga 662 |||||| |||||||||||||||||| Sbjct: 1089120 caaggaggcggtcgctggccaggga 1089096
>ref|NM_001059765.1| Oryza sativa (japonica cultivar-group) Os04g0501600 (Os04g0501600) mRNA, complete cds Length = 3035 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 665 tgagcagctcgtcgtcgtcgtccgg 689 ||||||||||||||||| ||||||| Sbjct: 246 tgagcagctcgtcgtcggcgtccgg 222
>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence Length = 3556545 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 580 gcggctccaggtgccgggcgtgacc 604 |||||| |||||||||||||||||| Sbjct: 206649 gcggctgcaggtgccgggcgtgacc 206673
>gb|AC188150.5| Canis Familiaris chromosome 6, clone XX-346D24, complete sequence Length = 176535 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1433 ttctcctgaaatgtctagaca 1453 ||||||||||||||||||||| Sbjct: 160095 ttctcctgaaatgtctagaca 160115
>ref|XM_001150401.1| PREDICTED: Pan troglodytes hypothetical protein LOC745038 (LOC745038), mRNA Length = 2623 Score = 42.1 bits (21), Expect = 6.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 172 ggcctggtccattggattggaggggcgtcagaa 204 |||||||||| ||| ||||||||||||||||| Sbjct: 949 ggcctggtcccttgtgttggaggggcgtcagaa 981
>ref|XM_001167950.1| PREDICTED: Pan troglodytes RNA-binding protein with multiple splicing (RBPMS), mRNA Length = 3926 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 347 cccctggctcccgccctccctctcc 371
>gb|DQ182435.1| Uncultured mycorrhiza (Sebacinales) isolate 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 552 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 agccacagggaagcagcagca 456 ||||||||||||||||||||| Sbjct: 447 agccacagggaagcagcagca 427
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 13322190 agcagcagcaacagcagccaa 13322170 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 20343168 ggaagcagcagcaacagcagc 20343148
>ref|XM_624525.2| PREDICTED: Apis mellifera similar to Sp1 CG1343-PA, isoform A (LOC552146), partial mRNA Length = 1596 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 1358 agcagcagcaacagcagccaa 1378
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 580 gcggctccaggtgccgggcgtgacc 604 |||||| |||||||||||||||||| Sbjct: 3125218 gcggctgcaggtgccgggcgtgacc 3125194
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 589 ggtgccgggcgtgacctgctg 609 ||||||||||||||||||||| Sbjct: 846193 ggtgccgggcgtgacctgctg 846173
>emb|CT573363.8| Mouse DNA sequence from clone RP23-443F11 on chromosome 17, complete sequence Length = 86313 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tccctccctccctctccccat 144 ||||||||||||||||||||| Sbjct: 67425 tccctccctccctctccccat 67445
>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence Length = 35427 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 666 gagcagctcgtcgtcgtcgtc 686 ||||||||||||||||||||| Sbjct: 11124 gagcagctcgtcgtcgtcgtc 11144
>gb|AC125407.4| Mus musculus BAC clone RP23-94F17 from chromosome 5, complete sequence Length = 233082 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 112992 ctccctccctccctctcccca 112972
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 154665 agcagcagcaacagcagccaa 154685
>gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome 7, complete sequence Length = 215537 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 40861 ctccctccctccctctcccca 40841
>gb|AC165084.6| Mus musculus BAC clone RP23-352H11 from chromosome 7, complete sequence Length = 182827 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctc 137 ||||||||||||||||||||| Sbjct: 101296 ccctggctccctccctccctc 101276
>ref|XM_589529.2| PREDICTED: Bos taurus similar to small nuclear RNA activating complex, polypeptide 4, 190kDa (LOC512086), mRNA Length = 4889 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 1936 ggaagcagcagcaacagcagc 1956
>gb|AC107754.9| Mus musculus chromosome 7, clone RP23-231J2, complete sequence Length = 171637 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctctccc 141 |||| |||||||||||||||||||| Sbjct: 46499 ccctcgctccctccctccctctccc 46475
>gb|AC069539.5| Homo sapiens chromosome 11 clone RP11-321E15, complete sequence Length = 181471 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctc 137 ||||||||||||||||||||| Sbjct: 107413 ccctggctccctccctccctc 107393
>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence Length = 171563 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 aagcagcagcaacagcagcca 466 ||||||||||||||||||||| Sbjct: 88689 aagcagcagcaacagcagcca 88669
>gb|AC010993.13| Drosophila melanogaster clone BACR27O05, complete sequence Length = 193526 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 168005 agcagcagcaacagcagccaa 167985
>gb|AC139578.4| Mus musculus BAC clone RP23-188P12 from chromosome 18, complete sequence Length = 179415 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 143382 ctccctccctccctctcccca 143402
>gb|AC129574.8| Mus musculus chromosome 16, clone RP23-78C2, complete sequence Length = 214649 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctctccc 141 ||||| ||||||||||||||||||| Sbjct: 64399 ccctgcctccctccctccctctccc 64375
>ref|XM_654669.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2157.2), mRNA Length = 1272 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 833 ccggtggtggtgttggtgcca 853 ||||||||||||||||||||| Sbjct: 1136 ccggtggtggtgttggtgcca 1116
>gb|BT014632.1| Drosophila melanogaster SD12316 full insert cDNA Length = 6989 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 6468 ggaagcagcagcaacagcagc 6488
>gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, complete sequence Length = 186155 Score = 42.1 bits (21), Expect = 6.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctctccccatc 145 ||||| ||||||||||||||||| ||||| Sbjct: 181027 ccctgactccctccctccctctctccatc 180999
>gb|AC102312.11| Mus musculus chromosome 10, clone RP24-428L4, complete sequence Length = 182940 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 ccctccctccctctccccatc 145 ||||||||||||||||||||| Sbjct: 76030 ccctccctccctctccccatc 76010
>gb|AC068500.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-175C13, complete sequence Length = 201878 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctc 137 ||||||||||||||||||||| Sbjct: 134960 ccctggctccctccctccctc 134940
>gb|AC125096.3| Mus musculus BAC clone RP24-181K19 from chromosome 18, complete sequence Length = 154941 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 94562 ctccctccctccctctcccca 94582
>gb|AC126021.3| Mus musculus BAC clone RP24-386D8 from chromosome 18, complete sequence Length = 137484 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 136075 agcagcagcaacagcagccaa 136095
>gb|AC129195.3| Mus musculus BAC clone RP24-150H14 from chromosome 1, complete sequence Length = 152726 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 tggctccctccctccctctcc 140 ||||||||||||||||||||| Sbjct: 10210 tggctccctccctccctctcc 10190
>gb|AC131109.3| Mus musculus BAC clone RP23-362M7 from chromosome 18, complete sequence Length = 177690 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 5238 ctccctccctccctctcccca 5258
>gb|AC121862.3| Mus musculus BAC clone RP24-110E10 from chromosome 14, complete sequence Length = 178501 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 144975 ggaagcagcagcaacagcagc 144995
>gb|AC109329.8| Homo sapiens chromosome 8, clone CTD-3107M8, complete sequence Length = 215644 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 149806 cccctggctcccgccctccctctcc 149830
>gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complete sequence Length = 175515 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 127938 ctccctccctccctctcccca 127918
>ref|NM_134552.3| Drosophila melanogaster RhoGAP19D CG1412-RA (RhoGAP19D), mRNA Length = 7187 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 6675 ggaagcagcagcaacagcagc 6695
>gb|AC110169.7| Mus musculus chromosome 9, clone RP23-233D3, complete sequence Length = 193041 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ccctggctccctccctccctctccc 141 ||||| ||||||||||||||||||| Sbjct: 130571 ccctgcctccctccctccctctccc 130595
>ref|NM_078977.2| Drosophila melanogaster toutatis CG10897-RA, transcript variant A (tou), mRNA Length = 10497 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 4835 agcagcagcaacagcagccaa 4855
>gb|AC157783.7| Mus musculus chromosome 5, clone RP23-340G2, complete sequence Length = 212164 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 ccctggctccctccctccctc 137 ||||||||||||||||||||| Sbjct: 184814 ccctggctccctccctccctc 184834
>gb|AC129805.7| Homo sapiens 12 BAC RP11-125N22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165378 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1461 tgtattcttttttctattcttttct 1485 ||||||||||||||| ||||||||| Sbjct: 108422 tgtattcttttttcttttcttttct 108446
>gb|AC120797.9| Mus musculus chromosome 18, clone RP24-81D18, complete sequence Length = 210631 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 68215 ctccctccctccctctcccca 68235
>gb|AC090647.6| Genomic sequence for Mus musculus, clone RP23-252I12, complete sequence Length = 139891 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 64297 ctccctccctccctctcccca 64277
>emb|CR848714.6| Wallaby DNA sequence from clone MEKBa-460J13, complete sequence Length = 186287 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 tccctccctccctctccccat 144 ||||||||||||||||||||| Sbjct: 181564 tccctccctccctctccccat 181544
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 6.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1464 attcttttttctattcttttctagaacga 1492 ||||||||| || |||||||||||||||| Sbjct: 1390024 attctttttcctcttcttttctagaacga 1390052
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 665 tgagcagctcgtcgtcgtcgtccgg 689 ||||||||||||||||| ||||||| Sbjct: 141348 tgagcagctcgtcgtcggcgtccgg 141372
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 gctccctccctccctctcccc 142 ||||||||||||||||||||| Sbjct: 470424 gctccctccctccctctcccc 470404 Score = 42.1 bits (21), Expect = 6.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1320 ctgcatacagcactggctccggcagaagaactggtgccccatctgcaaa 1368 |||||| || || |||||| |||||||||||||||| || || |||||| Sbjct: 2795200 ctgcattcaccagtggctcaggcagaagaactggtgtccaatatgcaaa 2795248
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 ctccctctccccatcgaggaa 151 ||||||||||||||||||||| Sbjct: 8677638 ctccctctccccatcgaggaa 8677618 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 35972563 ggaagcagcagcaacagcagc 35972583
>emb|AL161447.20| Human DNA sequence from clone RP11-379P1 on chromosome 9 Contains the 3' end of a novel gene (FLJ21613) similar to rat corneal wound healing related protein (includes FLJ22634), the GOLPH2 gene for golgi phosphoprotein 2 (GP73), a novel pseudogene and a CpG island, complete sequence Length = 160115 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1461 tgtattcttttttctattcttttct 1485 ||||||||||||||| ||||||||| Sbjct: 116355 tgtattcttttttcttttcttttct 116331
>emb|AL157364.15| Human DNA sequence from clone RP11-31H2 on chromosome 13 Contians the ATP12A gene for ATPase, H+/K+ transporting, nongastric, alpha polypeptide, a ribosomal protein L26 (RPL26) pseudogene and a CpG island, complete sequence Length = 91231 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1399 caccagcagcctctgcttgtt 1419 ||||||||||||||||||||| Sbjct: 2253 caccagcagcctctgcttgtt 2273
>gb|AC069074.11| Mus musculus 10 BAC RP23-243G3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190081 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 ccctccctccctctccccatc 145 ||||||||||||||||||||| Sbjct: 175020 ccctccctccctctccccatc 175040
>gb|AY058603.1| Drosophila melanogaster LD29482 full length cDNA Length = 5093 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 4581 ggaagcagcagcaacagcagc 4601
>gb|AC154622.2| Mus musculus BAC clone RP23-325D11 from chromosome 16, complete sequence Length = 189631 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 caacagcagccaaggaagcag 475 ||||||||||||||||||||| Sbjct: 183020 caacagcagccaaggaagcag 183000
>gb|AC152060.3| Mus musculus BAC clone RP23-430C3 from chromosome 18, complete sequence Length = 198600 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 47731 agcagcagcaacagcagccaa 47751
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 78692 ggaagcagcagcaacagcagc 78672
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 ctccctctccccatcgaggaa 151 ||||||||||||||||||||| Sbjct: 23454 ctccctctccccatcgaggaa 23434
>ref|NM_006867.2| Homo sapiens RNA binding protein with multiple splicing (RBPMS), transcript variant 4, mRNA Length = 3154 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 348 cccctggctcccgccctccctctcc 372
>ref|NM_001008712.1| Homo sapiens RNA binding protein with multiple splicing (RBPMS), transcript variant 3, mRNA Length = 1438 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 348 cccctggctcccgccctccctctcc 372
>ref|NM_001008711.1| Homo sapiens RNA binding protein with multiple splicing (RBPMS), transcript variant 2, mRNA Length = 3034 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 348 cccctggctcccgccctccctctcc 372
>ref|NM_001008710.1| Homo sapiens RNA binding protein with multiple splicing (RBPMS), transcript variant 1, mRNA Length = 2948 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 348 cccctggctcccgccctccctctcc 372
>gb|AF314193.1| Drosophila melanogaster Toutatis (tou) gene, complete cds Length = 39574 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 31625 agcagcagcaacagcagccaa 31645
>emb|BX842629.1| Neurospora crassa DNA linkage group I BAC contig B20J13 Length = 126048 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 9770 ggaagcagcagcaacagcagc 9750
>gb|AC011758.6|AC011758 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone BACR25I22, complete sequence Length = 164942 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 50707 ggaagcagcagcaacagcagc 50687
>gb|AC010843.10|AC010843 Drosophila melanogaster, chromosome X, region 12A-12A, BAC clone BACR08A22, complete sequence Length = 170914 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 17886 agcagcagcaacagcagccaa 17866
>emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on chromosome 11 Contains two novel genes, the 3' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two CpG islands, complete sequence Length = 190198 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 112004 ctccctccctccctctcccca 111984
>emb|AL645546.5| Mouse DNA sequence from clone RP23-124G18 on chromosome 13 Contains the V1ri3, V1ri6, V1rh4, V1rh19 and V1rh21 genes for vomeronasal 1 receptor proteins I3, I6, H4, H19 and H21, a V1rh and a V1ri pseudogene and a fatty acid elongase 2 pseudogene, complete sequence Length = 122517 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 76501 ctccctccctccctctcccca 76521
>gb|AC122710.3| Homo sapiens chromosome 5 clone RP11-332J15, complete sequence Length = 204540 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 gctccctccctccctctcccc 142 ||||||||||||||||||||| Sbjct: 88768 gctccctccctccctctcccc 88788
>gb|AC011696.4|AC011696 Drosophila melanogaster, chromosome 2R, region 48A-48C, BAC clone BACR35F01, complete sequence Length = 170869 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 2060 agcagcagcaacagcagccaa 2040
>gb|AC007473.10|AC007473 Drosophila melanogaster, chromosome 2R, region 48A-48B, BAC clone BACR38D12, complete sequence Length = 171831 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agcagcagcaacagcagccaa 467 ||||||||||||||||||||| Sbjct: 42379 agcagcagcaacagcagccaa 42359
>gb|AC154535.2| Mus musculus BAC clone RP23-447M9 from chromosome 13, complete sequence Length = 179176 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gaagcagcagcaacagcagcc 465 ||||||||||||||||||||| Sbjct: 134666 gaagcagcagcaacagcagcc 134646
>gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome 16, complete sequence Length = 178222 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 gaagcagcagcaacagcagcc 465 ||||||||||||||||||||| Sbjct: 121612 gaagcagcagcaacagcagcc 121632
>gb|AC133183.3| Mus musculus BAC clone RP24-185O19 from chromosome 12, complete sequence Length = 182948 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 125081 ctccctccctccctctcccca 125101
>gb|AC021072.27| Homo sapiens 12 BAC RP11-624J6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55034 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 445 gaagcagcagcaacagcagccaagg 469 ||||||||||| ||||||||||||| Sbjct: 33845 gaagcagcagctacagcagccaagg 33869
>gb|AC116499.9| Mus musculus chromosome 8, clone RP24-294M17, complete sequence Length = 159272 Score = 42.1 bits (21), Expect = 6.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctctccccatc 145 ||||| ||||||||||||||||| ||||| Sbjct: 15299 ccctgactccctccctccctctctccatc 15271
>gb|AC009970.10| Homo sapiens BAC clone RP11-440P5 from 2, complete sequence Length = 137009 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 ggctccctccctccctctccc 141 ||||||||||||||||||||| Sbjct: 79902 ggctccctccctccctctccc 79922
>gb|AC144788.3| Ornithorhynchus anatinus clone OA_Bb-63M19, complete sequence Length = 122867 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 26249 ctccctccctccctctcccca 26269
>gb|AC115994.24| Homo sapiens chromosome 17, clone CTD-2535L24, complete sequence Length = 242913 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ccctggctccctccctccctctccc 141 ||||| ||||||||||||||||||| Sbjct: 83965 ccctgtctccctccctccctctccc 83989
>emb|CR613046.1| full-length cDNA clone CS0DI005YL13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1308 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 265 cccctggctcccgccctccctctcc 289
>gb|AC117373.10| Homo sapiens 12 BAC RP11-174M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175768 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1465 ttcttttttctattcttttct 1485 ||||||||||||||||||||| Sbjct: 41652 ttcttttttctattcttttct 41632
>emb|CR604775.1| full-length cDNA clone CS0DI053YM24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1408 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 297 cccctggctcccgccctccctctcc 321
>gb|AC007972.4|AC007972 Homo sapiens clone RP11-537C24, complete sequence Length = 128289 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctctccc 141 ||||| ||||||||||||||||||| Sbjct: 23373 ccctgcctccctccctccctctccc 23349
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 42.1 bits (21), Expect = 6.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1320 ctgcatacagcactggctccggcagaagaactggtgccccatctgcaaa 1368 |||||| || || |||||| |||||||||||||||| || || |||||| Sbjct: 63428 ctgcattcaccagtggctcaggcagaagaactggtgtccaatatgcaaa 63476
>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017C12 Length = 135356 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 gctccctccctccctctcccc 142 ||||||||||||||||||||| Sbjct: 66665 gctccctccctccctctcccc 66645
>dbj|AB112588.1| Satsuma dwarf virus CP gene for coat proteins, partial cds Length = 2160 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1493 aacatttgtttgtgccttcaa 1513 ||||||||||||||||||||| Sbjct: 41 aacatttgtttgtgccttcaa 61
>gb|AC069259.14| Homo sapiens 3 BAC RP11-163H6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166530 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 17537 ctccctccctccctctcccca 17557
>dbj|AB115771.1| Physcomitrella patens subsp. patens PpLhcb1 gene for light-harvesting chlorophyll a/b-binding protein 1, complete cds Length = 1975 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 gctccctccctccctctcccc 142 ||||||||||||||||||||| Sbjct: 494 gctccctccctccctctcccc 514
>ref|XM_960050.1| Neurospora crassa OR74A hypothetical protein (NCU00950.1) partial mRNA Length = 1428 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 1147 ggaagcagcagcaacagcagc 1167
>gb|AC022336.12| Homo sapiens 3 BAC RP11-71H17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166071 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1461 tgtattcttttttctattcttttct 1485 ||||||||||||||| ||||||||| Sbjct: 164960 tgtattcttttttcttttcttttct 164936
>emb|AL114629.1|CNS01BSD Botrytis cinerea strain T4 cDNA library Length = 780 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 691 gggttcagtgccagttcttct 711 ||||||||||||||||||||| Sbjct: 674 gggttcagtgccagttcttct 654
>dbj|AK068612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155D11, full insert sequence Length = 3038 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 665 tgagcagctcgtcgtcgtcgtccgg 689 ||||||||||||||||| ||||||| Sbjct: 250 tgagcagctcgtcgtcggcgtccgg 226
>emb|BX005175.8| Zebrafish DNA sequence from clone DKEY-14H17 in linkage group 11, complete sequence Length = 234851 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 80355 ggaagcagcagcaacagcagc 80335
>dbj|AP002765.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-634B22, complete sequence Length = 178169 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctc 137 ||||||||||||||||||||| Sbjct: 135274 ccctggctccctccctccctc 135254
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 6.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1464 attcttttttctattcttttctagaacga 1492 ||||||||| || |||||||||||||||| Sbjct: 2837434 attctttttcctcttcttttctagaacga 2837406
>gb|AC115062.13| Mus musculus chromosome 3, clone RP24-399B3, complete sequence Length = 198727 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 83180 ctccctccctccctctcccca 83200
>gb|AF120318.1|MMMAHNY2 Mus musculus mahogany (mg) gene, exons and partial cds Length = 7437 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 ctggctccctccctccctctc 139 ||||||||||||||||||||| Sbjct: 1562 ctggctccctccctccctctc 1542
>emb|BX572639.11| Zebrafish DNA sequence from clone CH211-209J5 in linkage group 11, complete sequence Length = 145689 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ggaagcagcagcaacagcagc 464 ||||||||||||||||||||| Sbjct: 41830 ggaagcagcagcaacagcagc 41810
>emb|AL160161.10| Human DNA sequence from clone RP1-188D3 on chromosome 6, complete sequence Length = 72159 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctctccc 141 ||||| ||||||||||||||||||| Sbjct: 47531 ccctgcctccctccctccctctccc 47507
>emb|CT025589.9| Mouse DNA sequence from clone RP24-149O16 on chromosome 16, complete sequence Length = 159420 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 caacagcagccaaggaagcag 475 ||||||||||||||||||||| Sbjct: 153213 caacagcagccaaggaagcag 153233
>emb|CT573044.1| Pig DNA sequence from clone XX-BE156J14 on chromosome 14, complete sequence Length = 184551 Score = 42.1 bits (21), Expect = 6.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 564 caggacgggagagacggcggctccaggtg 592 ||||||||||||||| |||||||||||| Sbjct: 18658 caggacgggagagacaccggctccaggtg 18686
>gb|AC173346.1| Mus musculus BAC clone RP23-42N8 from chromosome 9, complete sequence Length = 219266 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ccctggctccctccctccctctccc 141 ||||| ||||||||||||||||||| Sbjct: 3276 ccctgcctccctccctccctctccc 3252
>emb|AL808012.13| Mouse DNA sequence from clone RP23-451N14 on chromosome X, complete sequence Length = 116926 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 63871 ctccctccctccctctcccca 63851
>emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein, exons 1-12 Length = 163455 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 ctccctccctccctctcccca 143 ||||||||||||||||||||| Sbjct: 49956 ctccctccctccctctcccca 49936
>emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chromosome 2, complete sequence Length = 210427 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 tccctccctccctctccccat 144 ||||||||||||||||||||| Sbjct: 136640 tccctccctccctctccccat 136620
>emb|AL833771.4| Mouse DNA sequence from clone RP23-228H14 on chromosome 2, complete sequence Length = 189283 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 ctggctccctccctccctctc 139 ||||||||||||||||||||| Sbjct: 141127 ctggctccctccctccctctc 141107
>gb|BC003608.2| Homo sapiens RNA binding protein with multiple splicing, mRNA (cDNA clone MGC:1257 IMAGE:3505124), complete cds Length = 1306 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 216 cccctggctcccgccctccctctcc 240
>dbj|D84110.1| Homo sapiens mRNA for RBP-MS/type 4, complete cds Length = 1594 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 249 cccctggctcccgccctccctctcc 273
>dbj|D84109.1| Homo sapiens mRNA for RBP-MS/type 3, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 249 cccctggctcccgccctccctctcc 273
>dbj|D84108.1| Homo sapiens mRNA for RBP-MS/type 2, complete cds Length = 1474 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 249 cccctggctcccgccctccctctcc 273
>dbj|D84107.1| Homo sapiens mRNA for RBP-MS/type 1, complete cds Length = 1388 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 cccctggctccctccctccctctcc 140 |||||||||||| |||||||||||| Sbjct: 249 cccctggctcccgccctccctctcc 273 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 271,807,187 Number of extensions: 16838439 Number of successful extensions: 732434 Number of sequences better than 10.0: 213 Number of HSP's gapped: 732433 Number of HSP's successfully gapped: 265 Length of query: 1643 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1620 Effective length of database: 18,503,978,556 Effective search space: 29976445260720 Effective search space used: 29976445260720 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
