>Q6BK66:CCS1_DEBHA Superoxide dismutase 1 copper chaperone - Debaryomyces hansenii|
           (Yeast) (Torulaspora hansenii)
          Length = 250
 Score = 43.5 bits (101), Expect = 9e-04
 Identities = 20/56 (35%), Positives = 34/56 (60%)
 Frame = +2

Query: 149 VKMDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVTGFVEPSKVLARVKSTGKVA 316
           V M+C  C   V  ++KS+ G++   ++ K + VT  G V PS+++  ++STGK A
Sbjct: 11  VPMECQSCVDSVSLSLKSLNGISKYDIDLKSNLVTTEGSVPPSEIVKAIQSTGKDA 66

>Q59385:ATCU_ECOLI Copper-transporting P-type ATPase - Escherichia coli|
          Length = 834

 Score = 38.9 bits (89), Expect = 0.021
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVTGFVEPSKVLARVKSTGKVAE 319
           M C  C  RV+NA++S+ GVT   VN       V G   P  ++  V+  G  AE
Sbjct: 108 MSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAE 162

>Q8XD24:ATCU_ECO57 Copper-transporting P-type ATPase - Escherichia coli O157:H7|
          Length = 834

 Score = 38.9 bits (89), Expect = 0.021
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVTGFVEPSKVLARVKSTGKVAE 319
           M C  C  RV+NA++S+ GVT   VN       V G   P  ++  V+  G  AE
Sbjct: 108 MSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAE 162

>Q75DD6:CCS1_ASHGO Superoxide dismutase 1 copper chaperone - Ashbya gossypii (Yeast)|
           (Eremothecium gossypii)
          Length = 238

 Score = 37.7 bits (86), Expect = 0.047
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 149 VKMDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVTGFVEPSKVLARVKSTGKVA 316
           V M CG C   +  A++++ GV  V+ + +   V V G   PS ++  + +TG+ A
Sbjct: 14  VPMHCGDCTGEISRALRAVPGVQEVTPDLERQLVAVRGIAPPSSIVQALAATGRDA 69

>Q9X5X3:ATCU_RHIME Copper-transporting P-type ATPase - Rhizobium meliloti|
           (Sinorhizobium meliloti)
          Length = 827

 Score = 37.7 bits (86), Expect = 0.047
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVT---VTGFVEPSKVLARVKSTG 307
           M C  C  RV+ A+K++ GV   SVN    K T   V+G  E S + A VK  G
Sbjct: 91  MTCASCVSRVEKALKAVPGVADASVNLATEKATVRLVSGSAEISALAAAVKGAG 144



 Score = 36.6 bits (83), Expect = 0.10
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTV--TGFVEPSKVLARVKSTG 307
           M C  C RRV+ A+ ++ GV + +VN    + TV   G  E + VL  V+  G
Sbjct: 24  MTCASCVRRVEKAIAAVPGVASANVNLATERATVQFNGVPETTSVLRAVEKAG 76

>Q6BZU2:CCS1_YARLI Superoxide dismutase 1 copper chaperone - Yarrowia lipolytica|
           (Candida lipolytica)
          Length = 234

 Score = 37.4 bits (85), Expect = 0.061
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = +2

Query: 134 TVNIKVKMDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVTGFVEPSKVLARVKSTGKV 313
           T    V ++C  C   VK A+ +++G+ +V        ++VTG   PS+++  V++ GK 
Sbjct: 4   TTTFAVPLECESCCDSVKQALANVQGIESVDCKLVDQLISVTGTSAPSQIVKAVQNIGKD 63

Query: 314 A 316
           A
Sbjct: 64  A 64

>Q8ZCA7:ATCU_YERPE Copper-transporting P-type ATPase - Yersinia pestis|
          Length = 961

 Score = 37.0 bits (84), Expect = 0.080
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVTGFVEPSKVLARVKSTGKVAEM 322
           M C  C  +V+NA++ + GV    VN       VTG      ++A VK+ G  AE+
Sbjct: 235 MSCASCVSKVQNALQRVDGVQVARVNLAERSALVTGTQNNEALIAAVKNAGYGAEI 290



 Score = 30.4 bits (67), Expect = 7.5
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +2

Query: 128 LQTVNIKVK-MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVTGFVEPSKVLARVKST 304
           LQT  + ++ + C  C +RVK A++S   V    VN   +K  VTG  +   ++  +K T
Sbjct: 2   LQTTLLALQGLSCMNCAQRVKAALESREDVHHAEVNVHYAK--VTGEADTHALIETIKQT 59

Query: 305 G 307
           G
Sbjct: 60  G 60

>P58342:ATCU2_RHIME Copper-transporting ATPase 2 - Rhizobium meliloti (Sinorhizobium|
           meliloti)
          Length = 827

 Score = 35.4 bits (80), Expect = 0.23
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
 Frame = +2

Query: 98  AALKLRKRRPLQ-TVNIKVK-MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVTGFVE 271
           A  K+ K  PL  + N  ++ M C  C RRV+ A+ ++ GV + +VN    + TV    E
Sbjct: 3   ALKKIEKAAPLPVSTNFGIEGMTCASCVRRVEKAITAVPGVASANVNLATERATVQFDGE 62

Query: 272 PS--KVLARVKSTG 307
           P    VL  ++  G
Sbjct: 63  PDTLAVLHAIEKAG 76

>Q8ZR95:ATCU_SALTY Copper-transporting P-type ATPase - Salmonella typhimurium|
          Length = 833

 Score = 34.3 bits (77), Expect = 0.52
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVTGFVEPSKVLARVKSTGKVAE 319
           M C  C  RV++A++S+ GVT   VN       V G    + ++  V+  G  AE
Sbjct: 107 MSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVEKAGYGAE 161

>Q8Z8S4:ATCU_SALTI Copper-transporting P-type ATPase - Salmonella typhi|
          Length = 833

 Score = 34.3 bits (77), Expect = 0.52
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVTGFVEPSKVLARVKSTGKVAE 319
           M C  C  RV++A++S+ GVT   VN       V G    + ++  V+  G  AE
Sbjct: 107 MSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVEKAGYGAE 161

>P58341:ATCU1_RHIME Copper-transporting ATPase 1 - Rhizobium meliloti (Sinorhizobium|
           meliloti)
          Length = 826

 Score = 34.3 bits (77), Expect = 0.52
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVN--PKMSKVTVTGFVEPSKVLARVKSTG 307
           M C  C RRV+ A+ ++ GV + +VN   + + V  TG  +   VL  ++  G
Sbjct: 24  MTCASCVRRVEKAISAVPGVASATVNLATERASVQFTGAPDTGGVLLAIEKAG 76



 Score = 31.2 bits (69), Expect = 4.4
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTV--TGFVEPSKVLARVKSTG 307
           M C  C  RV+ A++++ GV   SVN    K TV     V+ + + A V+  G
Sbjct: 91  MTCASCVSRVEKALRTVPGVADASVNLATEKGTVRFVSGVDVAAIEAAVRDAG 143

>Q5VYV0:FOXB2_HUMAN Forkhead box protein B2 - Homo sapiens (Human)|
          Length = 432

 Score = 33.9 bits (76), Expect = 0.68
 Identities = 21/62 (33%), Positives = 23/62 (37%)
 Frame = -2

Query: 304 GALHPRQHLARLHEPRHRHLAHLGVH*HGRHTPNRLDGVLDPSLAAPTVHLHLDVYRLQW 125
           G LHP  H    H P H H  H   H H  H P +      P    P    H+  Y  Q 
Sbjct: 134 GHLHPHHH----HHPHHHHHHHAAAHHHHHHHPPQ------PPPPPPPPPPHMVHYFHQQ 183

Query: 124 PP 119
           PP
Sbjct: 184 PP 185

>Q60048:CADA2_LISMO Probable cadmium-transporting ATPase - Listeria monocytogenes|
          Length = 711

 Score = 33.9 bits (76), Expect = 0.68
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVTG 262
           + C  C  + +  VK I GVT   VN   SK+TVTG
Sbjct: 12  LSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTG 47

>Q59998:ATZN_SYNY3 Zinc-transporting ATPase - Synechocystis sp. (strain PCC 6803)|
          Length = 721

 Score = 33.5 bits (75), Expect = 0.88
 Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +2

Query: 125 PLQTVNIKVK-MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVT 259
           PL+T  ++V  MDC  C+ +++ +++ ++GV   SV     ++TVT
Sbjct: 6   PLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVT 51

>P37617:ATZN_ECOLI Lead, cadmium, zinc and mercury-transporting ATPase - Escherichia|
           coli
          Length = 732

 Score = 33.5 bits (75), Expect = 0.88
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTV 256
           MDC  C R+V+NAV+ + GV  V V     K+ V
Sbjct: 57  MDCAACARKVENAVRQLAGVNQVQVLFATEKLVV 90

>Q54465:MERA_SHEPU Mercuric reductase - Shewanella putrefaciens (Pseudomonas|
           putrefaciens)
          Length = 557

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +2

Query: 155 MDCGGCERRVKNAVKSIRGVTAVSVNPKMSKVTVT--GFVEPSKVLARVKSTGKVAE 319
           M C  C   VK A+ +I GV  V ++ + ++ T+T  G V  + ++  +++ G +A+
Sbjct: 9   MTCPSCVAHVKEALDAIEGVNKVEISYENARATITTNGGVSVTVLIGAIEALGYIAK 65

>P20093:PSBB_ANASP Photosystem II P680 chlorophyll A apoprotein - Anabaena sp. (strain|
           PCC 7120)
          Length = 509

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 19/73 (26%), Positives = 29/73 (39%)
 Frame = +2

Query: 278 KVLARVKSTGKVAEMWPYVPYSLTTYPYVGGAYDKKAPAGFVRGAPQAMADPGAPEVRYM 457
           +V + V     ++E W  +P  L  Y YVG   +  A  G  R  P    D  A   +  
Sbjct: 287 RVQSSVAQGASLSEAWSQIPEKLAFYDYVG---NSPAKGGLFRTGPMVKGDGIAQSWQGH 343

Query: 458 NMFNDEDVNSCTI 496
            +F D +    T+
Sbjct: 344 GVFKDAEGRELTV 356

>Q06680:CND3_YEAST Condensin complex subunit 3 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 1035

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 318 SATFPVLFTRASTLLGSTN-PVTVTLLILGFTDTAVTPRIDLTA 190
           SAT  +  TR+S +L   N P+T  +LI    DT +TP +  TA
Sbjct: 572 SATIVLCLTRSSYMLELVNTPLTENILIASLMDTLITPAVRNTA 615

>P04196:HRG_HUMAN Histidine-rich glycoprotein precursor - Homo sapiens (Human)|
          Length = 525

 Score = 31.2 bits (69), Expect = 4.4
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = -2

Query: 325 PHLGHLPGALHPRQHLARLHEPRHRHLAHLGVH*HGRH 212
           PH GH P A HP +H      P H H  H G H HG H
Sbjct: 361 PH-GHHPHAHHPHEHDTHRQHP-HGHHPH-GHHPHGHH 395

>Q9D0U1:DTWD2_MOUSE DTW domain-containing protein 2 - Mus musculus (Mouse)|
          Length = 298

 Score = 31.2 bits (69), Expect = 4.4
 Identities = 24/63 (38%), Positives = 27/63 (42%)
 Frame = +1

Query: 49  GRLGSPLRFVQHDRHKGSPQAQEEAATADGKHQGEDGLWGLREKGQERRQVDSGCDGRVS 228
           G L SP    +     G+P     A  A G     DGLWGL  +  ERR     C GR S
Sbjct: 19  GALASPTPDEEERTEGGAPPTATPAG-ASGDSTSADGLWGLPVEHAERR---PEC-GRCS 73

Query: 229 EPQ 237
            PQ
Sbjct: 74  RPQ 76

>Q96M34:CC030_HUMAN Uncharacterized protein C3orf30 - Homo sapiens (Human)|
          Length = 536

 Score = 30.8 bits (68), Expect = 5.7
 Identities = 19/71 (26%), Positives = 30/71 (42%)
 Frame = +1

Query: 37  DQDHGRLGSPLRFVQHDRHKGSPQAQEEAATADGKHQGEDGLWGLREKGQERRQVDSGCD 216
           +Q  G+  S    VQH++  G      E  TA+   +        R   Q  R+     D
Sbjct: 112 EQTKGKASSQANNVQHEQSDGQVSGLTEERTAEQTER--------RLPTQAERRTSGQID 163

Query: 217 GRVSEPQDEQG 249
           GR++ P D++G
Sbjct: 164 GRLAMPSDQRG 174

>O13534:YH1A_YEAST Putative uncharacterized protein YHR214W-A - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 161

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -3

Query: 255 TVTLLILGFTDTAVTPRIDLTAFLTLLSQPP 163
           T  LL+L  T  AVTPR+ L   L  L QPP
Sbjct: 63  TPLLLLLTVTTMAVTPRLSLLNVLKKLQQPP 93

>P39564:YAN8_YEAST Uncharacterized protein YAR068W - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 161

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -3

Query: 255 TVTLLILGFTDTAVTPRIDLTAFLTLLSQPP 163
           T  LL+L  T  AVTPR+ L   L  L QPP
Sbjct: 63  TPLLLLLTVTTMAVTPRLSLLNVLKKLQQPP 93

>P04929:HRPX_PLALO Histidine-rich glycoprotein precursor - Plasmodium lophurae|
          Length = 351

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
 Frame = -2

Query: 334 HVGPHLGHLPGALH-----PRQHLARLHEPRHRHLAHLGVH*HGRH 212
           H+G H  H P   H     P  H    H P H H  H   H H  H
Sbjct: 165 HLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHH 210

>Q9GPJ1:SKEL_DROME Protein skeletor - Drosophila melanogaster (Fruit fly)|
          Length = 743

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 23/59 (38%), Positives = 29/59 (49%)
 Frame = -2

Query: 328 GPHLGHLPGALHPRQHLARLHEPRHRHLAHLGVH*HGRHTPNRLDGVLDPSLAAPTVHL 152
           GPHL H P  LH R H    H+P+H    H+ +H H   T N       P+LA  T+ L
Sbjct: 142 GPHLIHHPPHLH-RLH----HQPQHAPHPHVHLH-HHNLTANL------PALAQKTIGL 188

>O33533:FIXI_RHILV Nitrogen fixation protein fixI - Rhizobium leguminosarum bv. viciae|
          Length = 761

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
 Frame = +2

Query: 161 CGGCERRVKNAVKSIRGVTAVSVNPKMSKVTV-------TGFVEPSKVLARVKSTGKVAE 319
           CGGC   ++ A+ ++  V    VN    +VT            +PSK+L  + S G  A 
Sbjct: 47  CGGCISTIERALLTLPFVKTARVNLTARRVTCVYQEEIEARATDPSKILGEINSAGYRAH 106

Query: 320 MW-PYVPYS 343
           ++ P  P S
Sbjct: 107 LFTPSAPES 115

>Q11039:DEAD_MYCTU Cold-shock DEAD box protein A homolog - Mycobacterium tuberculosis|
          Length = 563

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = +2

Query: 209 GVTAVSVNPKMSKVTVTGFVEPSKVLARVKSTG-KVAEMWP-YVPY--SLTTYPYVGGAY 376
           G TA    P +SK+ +T  V  + VL   +    +VAE +  Y  Y   L   P  GG+ 
Sbjct: 62  GKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSS 121

Query: 377 DKKAPAGFVRGAPQAMADPG 436
                AG  RGA   +  PG
Sbjct: 122 YAVQLAGLRRGAQVVVGTPG 141


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 114,961,762
Number of extensions: 2570419
Number of successful extensions: 7790
Number of sequences better than 10.0: 27
Number of HSP's gapped: 7772
Number of HSP's successfully gapped: 30
Length of query: 247
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 137
Effective length of database: 70,513,989
Effective search space: 9660416493
Effective search space used: 9660416493
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)