ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf46k23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q7TMY8:HUWE1_MOUSE E3 ubiquitin-protein ligase HUWE1 - Mus muscu... 35 1.8
2Q9Y5P1:O51B2_HUMAN Olfactory receptor 51B2 - Homo sapiens (Human) 33 3.9
3Q13635:PTC1_HUMAN Protein patched homolog 1 - Homo sapiens (Human) 33 5.1
4Q6L8G5:KR510_HUMAN Keratin-associated protein 5-10 - Homo sapien... 33 5.1
5Q60EY1:GH36_ORYSJ Probable indole-3-acetic acid-amido synthetase... 33 6.7
6Q9BYR2:KRA45_HUMAN Keratin-associated protein 4-5 - Homo sapiens... 32 8.7

>Q7TMY8:HUWE1_MOUSE E3 ubiquitin-protein ligase HUWE1 - Mus musculus (Mouse)|
          Length = 4377
 Score = 34.7 bits (78), Expect = 1.8
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
 Frame = +3

Query: 1911 AV*MNSSYGCRIAK*MIPVEGCFFHAHKRSSLGGDARIHLHLGAPLRSCPWELGSLRRET 2090
            +V M+++ GCR     I   G   H  K +S G  + +H+H  A    C   L +L +  
Sbjct: 3287 SVSMDAALGCRTNIFQIQRSGGRKHTEKHASSG--STVHIHPQAAPVVCRHVLDTLIQLA 3344

Query: 2091 QIF-DHFFSSL*KPTH-----SSGSCNSCQPCNCQPWCAHCC 2198
            ++F  HF     K T+       GS  +C PC+ Q   +  C
Sbjct: 3345 KVFPSHFTQQRTKETNCESDRERGSKQACSPCSSQSSSSGIC 3386



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>Q9Y5P1:O51B2_HUMAN Olfactory receptor 51B2 - Homo sapiens (Human)|
          Length = 312

 Score = 33.5 bits (75), Expect = 3.9
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 13/74 (17%)
 Frame = +3

Query: 1008 FFVAFCCIVLDNDFMLYYICPMHTLFTLMVY-----ASLGLFNKYNEIPSVMA------- 1151
            FF  + CI+L N  +LY I   H+L   M Y     A   L      +P+VM        
Sbjct: 29   FFAVYVCILLGNGMLLYLIKHDHSLHEPMYYFLTMLAGTDLMVTLTTMPTVMGILWVNHR 88

Query: 1152 -IKIAGCFLAVILI 1190
             I   GCFL    I
Sbjct: 89   EISSVGCFLQAYFI 102



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>Q13635:PTC1_HUMAN Protein patched homolog 1 - Homo sapiens (Human)|
          Length = 1447

 Score = 33.1 bits (74), Expect = 5.1
 Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
 Frame = -3

Query: 1721 RVARNERQKPFGLPVWYTRPEPNVDLGNISLQGDLAKPSEKSHRSAPQLLGAIA*ANIYS 1542
            R  +  R+ P    +W     P  D   IS +G  + PS ++ R  P+       A  ++
Sbjct: 1297 RQGQQPRRDPPREGLWPPLYRPRRDAFEISTEGH-SGPSNRA-RWGPRG------ARSHN 1348

Query: 1541 DRNP*RVGMVLVVRNFVQPVD-----------IFIPQIPSHDRNSHNGTLDRQPNLGLRL 1395
             RNP    M   V  + QP+            +  P +P   RN   G     P     L
Sbjct: 1349 PRNPASTAMGSSVPGYCQPITTVTASASVTVAVHPPPVPGPGRNPRGGLCPGYPETDHGL 1408

Query: 1394 FQLLHPSFHIRVE 1356
            F+  H  FH+R E
Sbjct: 1409 FEDPHVPFHVRCE 1421



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>Q6L8G5:KR510_HUMAN Keratin-associated protein 5-10 - Homo sapiens (Human)|
          Length = 202

 Score = 33.1 bits (74), Expect = 5.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 2148 CNSCQPCNCQPWCAHCCFVTC 2210
            CN C+PC C   C  CC  +C
Sbjct: 142  CNCCKPCCCSSGCGSCCQSSC 162



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>Q60EY1:GH36_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.6 - Oryza sativa|
            subsp. japonica (Rice)
          Length = 488

 Score = 32.7 bits (73), Expect = 6.7
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 1962 PVEGCFFHAHKRSSLGGDARIHLHLGAPLRSCPWELGSLRR--ETQIFDHFFSSL*KPTH 2135
            P+EGC   A++ S   GD        APL       G+  R  E  I     ++  KP  
Sbjct: 349  PLEGCLGGAYRLSRATGDV-------APLEVAVVRPGTFDRLAEAAIRGGAPANQYKPPR 401

Query: 2136 SSGSCNSCQPCNCQPWCA 2189
            SSG+  S   CN  PWCA
Sbjct: 402  SSGTGTSSMCCN-PPWCA 418



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>Q9BYR2:KRA45_HUMAN Keratin-associated protein 4-5 - Homo sapiens (Human)|
          Length = 186

 Score = 32.3 bits (72), Expect = 8.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +3

Query: 2112 SSL*KPTHSSGSCNSCQPCNCQPWCAH--CCFVTCLR 2216
            SS  +P     SC  C+PC C+P C    CC  TC R
Sbjct: 63   SSCCRPYCCESSC--CRPCCCRPSCCQTTCCRTTCCR 97


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 423,561,588
Number of extensions: 9798885
Number of successful extensions: 24364
Number of sequences better than 10.0: 6
Number of HSP's gapped: 24345
Number of HSP's successfully gapped: 6
Length of query: 757
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 636
Effective length of database: 67,496,744
Effective search space: 42927929184
Effective search space used: 42927929184
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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