Clone Name	FLbaf43l17
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	P58223:Y4837_ARATH KH domain-containing protein At4g18375 - Arab...	159	4e-38
2	O19048:PCBP1_RABIT Poly(rC)-binding protein 1 - Oryctolagus cuni...	74	2e-12
3	P60335:PCBP1_MOUSE Poly(rC)-binding protein 1 - Mus musculus (Mo...	74	2e-12
4	Q15365:PCBP1_HUMAN Poly(rC)-binding protein 1 - Homo sapiens (Hu...	74	2e-12
5	Q5E9A3:PCBP1_BOVIN Poly(rC)-binding protein 1 - Bos taurus (Bovine)	74	2e-12
6	Q15366:PCBP2_HUMAN Poly(rC)-binding protein 2 - Homo sapiens (Hu...	74	3e-12
7	Q61990:PCBP2_MOUSE Poly(rC)-binding protein 2 - Mus musculus (Mo...	72	2e-11
8	P57722:PCBP3_MOUSE Poly(rC)-binding protein 3 - Mus musculus (Mo...	68	2e-10
9	P57721:PCBP3_HUMAN Poly(rC)-binding protein 3 - Homo sapiens (Hu...	68	2e-10
10	Q5ZIQ3:HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K - G...	58	2e-07
11	P61980:HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K - Rat...	55	2e-06
12	O19049:HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K - O...	55	2e-06
13	Q5R5H8:HNRPK_PONPY Heterogeneous nuclear ribonucleoprotein K - P...	55	2e-06
14	P61979:HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K - M...	55	2e-06
15	Q4R4M6:HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K - M...	55	2e-06
16	P61978:HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K - H...	55	2e-06
17	Q3T0D0:HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K - B...	55	2e-06
18	P38151:PBP2_YEAST PAB1-binding protein 2 - Saccharomyces cerevis...	54	3e-06
19	P38199:YBD2_YEAST KH domain-containing protein YBL032W - Sacchar...	52	1e-05
20	P57723:PCBP4_HUMAN Poly(rC)-binding protein 4 - Homo sapiens (Hu...	49	9e-05
21	Q0VCU0:PCBP4_BOVIN Poly(rC)-binding protein 4 - Bos taurus (Bovine)	49	1e-04
22	P57724:PCBP4_MOUSE Poly(rC)-binding protein 4 - Mus musculus (Mo...	47	4e-04
23	Q91WJ8:FUBP1_MOUSE Far upstream element-binding protein 1 - Mus ...	46	0.001
24	Q96AE4:FUBP1_HUMAN Far upstream element-binding protein 1 - Homo...	46	0.001
25	Q80WA4:NOVA1_RAT RNA-binding protein Nova-1 - Rattus norvegicus ...	42	0.010
26	Q9JKN6:NOVA1_MOUSE RNA-binding protein Nova-1 - Mus musculus (Mo...	42	0.010
27	Q2PFW9:NOVA1_MACFA RNA-binding protein Nova-1 - Macaca fascicula...	42	0.010
28	P51513:NOVA1_HUMAN RNA-binding protein Nova-1 - Homo sapiens (Hu...	42	0.010
29	Q96I24:FUBP3_HUMAN Far upstream element-binding protein 3 - Homo...	42	0.014
30	Q9UNW9:NOVA2_HUMAN RNA-binding protein Nova-2 - Homo sapiens (Hu...	41	0.030
31	O42254:IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding pro...	40	0.040
32	Q5SF07:IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding pro...	40	0.067
33	O57526:IF23B_XENLA Insulin-like growth factor 2 mRNA-binding pro...	39	0.088
34	Q05A36:MEX3C_MOUSE RNA-binding protein MEX3C - Mus musculus (Mouse)	39	0.12
35	Q5U5Q3:MEX3C_HUMAN RNA-binding protein MEX3C - Homo sapiens (Human)	39	0.12
36	Q9CPN8:IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding pro...	39	0.12
37	O00425:IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding pro...	39	0.12
38	Q9H3S7:PTN23_HUMAN Tyrosine-protein phosphatase non-receptor typ...	39	0.15
39	Q8CGX0:IF2B1_RAT Insulin-like growth factor 2 mRNA-binding prote...	39	0.15
40	O73932:IF23A_XENLA Insulin-like growth factor 2 mRNA-binding pro...	39	0.15
41	Q5ZLP8:IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding pro...	38	0.20
42	Q6P1Z5:F113A_MOUSE Protein FAM113A - Mus musculus (Mouse)	37	0.33
43	Q80VL1:TDRKH_MOUSE Tudor and KH domain-containing protein - Mus ...	37	0.57
44	Q9Y2W6:TDRKH_HUMAN Tudor and KH domain-containing protein - Homo...	37	0.57
45	Q5RB68:IF2B2_PONPY Insulin-like growth factor 2 mRNA-binding pro...	37	0.57
46	Q9Y6M1:IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding pro...	37	0.57
47	Q9NZI8:IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding pro...	37	0.57
48	O88477:IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding pro...	36	0.75
49	Q9PW80:IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding pro...	35	1.7
50	Q8MJ06:RP1_PAPHA Oxygen-regulated protein 1 - Papio hamadryas (H...	35	2.2
51	Q09717:RANG_SCHPO Ran-specific GTPase-activating protein 1 - Sch...	35	2.2
52	Q7U8Q6:FABZ_SYNPX (3R)-hydroxymyristoyl-[acyl-carrier-protein] d...	35	2.2
53	Q8UVD9:ZBP2_CHICK Zipcode-binding protein 2 - Gallus gallus (Chi...	34	2.8
54	P81021:VIGLN_CHICK Vigilin - Gallus gallus (Chicken)	34	3.7
55	A1WHD1:RS3_VEREI 30S ribosomal protein S3 - Verminephrobacter ei...	34	3.7
56	Q99PF5:FUBP2_RAT Far upstream element-binding protein 2 - Rattus...	34	3.7
57	Q92945:FUBP2_HUMAN Far upstream element-binding protein 2 - Homo...	34	3.7
58	Q3A9S2:RS3_CARHZ 30S ribosomal protein S3 - Carboxydothermus hyd...	33	4.8
59	O76024:WFS1_HUMAN Wolframin - Homo sapiens (Human)	33	6.3
60	Q53218:Y4VJ_RHISN Uncharacterized protein y4vJ - Rhizobium sp. (...	33	6.3
61	Q6P0D5:WBP11_DANRE WW domain-binding protein 11 - Danio rerio (Z...	33	6.3
62	Q9Z1A6:VIGLN_RAT Vigilin - Rattus norvegicus (Rat)	33	6.3
63	Q8VDJ3:VIGLN_MOUSE Vigilin - Mus musculus (Mouse)	33	6.3
64	Q1WS96:RS3_LACS1 30S ribosomal protein S3 - Lactobacillus saliva...	33	6.3
65	P46342:PSTB1_BACSU Phosphate import ATP-binding protein pstB 1 -...	33	6.3
66	Q3AHS6:FABZ_SYNSC (3R)-hydroxymyristoyl-[acyl-carrier-protein] d...	33	6.3
67	Q3AZF3:FABZ_SYNS9 (3R)-hydroxymyristoyl-[acyl-carrier-protein] d...	33	6.3
68	Q8TL01:TYPH_METAC Putative thymidine phosphorylase - Methanosarc...	33	8.2
69	P08318:P100_HCMVA Large structural phosphoprotein - Human cytome...	33	8.2
70	Q08CK7:IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding pro...	33	8.2
71	A4RF61:HSE1_MAGGR Class E vacuolar protein-sorting machinery pro...	33	8.2
72	A1CEK6:HSE1_ASPCL Class E vacuolar protein-sorting machinery pro...	33	8.2

---

>P58223:Y4837_ARATH KH domain-containing protein At4g18375 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 606
 Score =  159 bits (403), Expect = 4e-38
 Identities = 176/708 (24%), Positives = 297/708 (41%), Gaps = 13/708 (1%)
 Frame = +1

Query: 145  KRPFQKNSSEHNGRAKWQKTKHAPSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIA 324
            ++  Q+N+SE N   K ++  H    + ++ +       RILCP +  G VIGK+G +I 
Sbjct: 7    RKQIQRNNSESNRNQK-RRISHDKINRDELVVY------RILCPIDVVGGVIGKSGKVIN 59

Query: 325  KIRKENGVKIRVDEAVPGCDERVIVITTVEKDKEASHEQGKQNDDGTAVSGDGXXXXXXX 504
             IR     KI+V + + GC +RVI I    K+K+                          
Sbjct: 60   AIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE------------------------- 94

Query: 505  XXXXXXXXXXNAHGKEEQDDAERGDSKEENDDSSVAKTTKLEPERVIPSAMNAILHVFDR 684
                                 E G +K EN+               +  A +A+L V+D 
Sbjct: 95   ---------------------EIGFTKSENEP--------------LCCAQDALLKVYDA 119

Query: 685  IFITESKNGTGDAPGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENL 864
            I  ++ +N T     +      RLLV  SQ   L+G  G  IK++   +   ++V  +++
Sbjct: 120  IVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDV 179

Query: 865  P----LCALLKDELCQINGELDSVRKGLNAVAQVLFTHPPRES---DVVPIVHPSGSSSH 1023
                 +CA+  D +  I+GE +SV++ L AV+ +++   PRE+   D      P+ S   
Sbjct: 180  SDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIV 239

Query: 1024 TFDRSDGLPP--GMPPNLHLPFQGPSHARGPFDIIDERPNVAPFSAFPDQRSNIPPFSSF 1197
              D S+ + P  G   N     Q  +     F+ +    +V+ F  + +  +N  P  + 
Sbjct: 240  PSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNAL----SVSDFQGYAETAANPVPVFAS 295

Query: 1198 PDALMHG-NASVPPEPLTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPK-- 1368
               + HG   S   E L F++LC                      +G  I++ ++  K  
Sbjct: 296  SLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCG 355

Query: 1369 SDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKEGPALSRLIVSPNQVGCLLGK 1548
             D+ +II++    P D  S A  A+L +Q  I    +        +L+VS   +GC++GK
Sbjct: 356  DDECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEN---VKMQLLVSSKVIGCVIGK 412

Query: 1549 GGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRNNLF 1728
             GS++ E+RK + A+I +    K         ++V+++G+  ++++AL+QI  RLR ++ 
Sbjct: 413  SGSVINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLREDVL 464

Query: 1729 RDRMASMGPSMQPPFGLLDPQFGAFPGIHESTSPRIYPNASQFHKDFMGRPLDEMSAPWT 1908
             D+      + +PP    +  F +       T P                    MS+  +
Sbjct: 465  GDK--DSVATRKPPARTDNCSFLSGSSNAGYTLPSF------------------MSSMAS 504

Query: 1909 TKGMQDVGDPMSISGVPGMAHRGIGGFS-GPVHSSRPIITGNIMVPRLIIPALCGHDGGC 2085
            T G    G   +   V G      G +S G + SS  +    I++P   +  + G  GG 
Sbjct: 505  TSGFHGYGSFPAGDNVLG----STGPYSYGRLPSSSAL---EILIPAHAMSKVMGKGGGN 557

Query: 2086 LNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQAFVLS 2229
            L  IR  SGA I I        D   ++SGT +QM  A +LVQAFV+S
Sbjct: 558  LENIRRISGAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQAFVMS 605

---

>O19048:PCBP1_RABIT Poly(rC)-binding protein 1 - Oryctolagus cuniculus (Rabbit)|
          Length = 356

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 86/356 (24%), Positives = 145/356 (40%), Gaps = 26/356 (7%)
 Frame = +1

Query: 1243 LTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPKSDDHIIIISGPAHPGDGI 1422
            LT RLL                      ++G  I I E      + II ++GP +    I
Sbjct: 14   LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN---AI 68

Query: 1423 SPAQNAILH-----VQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSK 1587
              A   I+      +   +T +T+    P   RL+V   Q G L+GKGG  + E+R+ + 
Sbjct: 69   FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128

Query: 1588 AHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRNNLFRDRMASMGPSMQP 1767
            A + V + D +P   +     + I G  +++ E + QI   +   L +     +      
Sbjct: 129  AQVQV-AGDMLPNSTE---RAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQ 184

Query: 1768 PFGLLDPQFGAFPGIHESTSPRIYPNASQFHKDFMGRPLDEMSAPWTTKGMQDVGDPMSI 1947
            P     P   A  G    +    YP+A+    D  G PLD     ++ +G   +  P+ +
Sbjct: 185  PMPASSPVICA-GGQDRCSDAAGYPHATH---DLEGPPLD----AYSIQGQHTI-SPLDL 235

Query: 1948 SGVPGMAHR--------GIGGFSGPVHSSRPIITG-------------NIMVPRLIIPAL 2064
            + +  +A +        G  GF+G + SS P + G              + +P  +I  +
Sbjct: 236  AKLNQVARQQSHFAMMHGGTGFAG-IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCI 294

Query: 2065 CGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQAFVLSE 2232
             G  G  +N IR+ SGA+I I  P+  S    V I+G+   +  A+ L+ A + SE
Sbjct: 295  IGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350



 Score = 43.9 bits (102), Expect = 0.004
 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
 Frame = +1

Query: 541 HGKEEQDD-AERGDSKEENDDSSVAKTTKLE---PERVIP--SAMNAILHVFDRIF--IT 696
           HGKE      ++G+S +   + S A+    E   PER+I      NAI   F  I   + 
Sbjct: 21  HGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLE 80

Query: 697 ESKNG--TGDAPGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLP 867
           E  N   T      + PV+ RL+V  +Q G L+G  G  IK++   +G +++V+ + LP
Sbjct: 81  EDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139



 Score = 42.0 bits (97), Expect = 0.014
 Identities = 19/49 (38%), Positives = 31/49 (63%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           IR+L   +  G++IGK G  + +IR+E+G +I + E    C ER+I +T
Sbjct: 16  IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT 62



 Score = 40.4 bits (93), Expect = 0.040
 Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV-DEAVPGCDERVIVITTV 411
           +R++ P  +CG++IGK G  I +IR+  G +++V  + +P   ER I I  V
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGV 151



 Score = 35.8 bits (81), Expect = 0.97
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +1

Query: 727 GQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLP 867
           G    ++ RLL+   +VG ++G +G  +K++  +SG  I +S+ N P
Sbjct: 9   GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP 55

---

>P60335:PCBP1_MOUSE Poly(rC)-binding protein 1 - Mus musculus (Mouse)|
          Length = 356

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 86/356 (24%), Positives = 145/356 (40%), Gaps = 26/356 (7%)
 Frame = +1

Query: 1243 LTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPKSDDHIIIISGPAHPGDGI 1422
            LT RLL                      ++G  I I E      + II ++GP +    I
Sbjct: 14   LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN---AI 68

Query: 1423 SPAQNAILH-----VQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSK 1587
              A   I+      +   +T +T+    P   RL+V   Q G L+GKGG  + E+R+ + 
Sbjct: 69   FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128

Query: 1588 AHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRNNLFRDRMASMGPSMQP 1767
            A + V + D +P   +     + I G  +++ E + QI   +   L +     +      
Sbjct: 129  AQVQV-AGDMLPNSTE---RAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQ 184

Query: 1768 PFGLLDPQFGAFPGIHESTSPRIYPNASQFHKDFMGRPLDEMSAPWTTKGMQDVGDPMSI 1947
            P     P   A  G    +    YP+A+    D  G PLD     ++ +G   +  P+ +
Sbjct: 185  PMPASSPVICA-GGQDRCSDAAGYPHATH---DLEGPPLD----AYSIQGQHTI-SPLDL 235

Query: 1948 SGVPGMAHR--------GIGGFSGPVHSSRPIITG-------------NIMVPRLIIPAL 2064
            + +  +A +        G  GF+G + SS P + G              + +P  +I  +
Sbjct: 236  AKLNQVARQQSHFAMMHGGTGFAG-IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCI 294

Query: 2065 CGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQAFVLSE 2232
             G  G  +N IR+ SGA+I I  P+  S    V I+G+   +  A+ L+ A + SE
Sbjct: 295  IGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350



 Score = 43.9 bits (102), Expect = 0.004
 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
 Frame = +1

Query: 541 HGKEEQDD-AERGDSKEENDDSSVAKTTKLE---PERVIP--SAMNAILHVFDRIF--IT 696
           HGKE      ++G+S +   + S A+    E   PER+I      NAI   F  I   + 
Sbjct: 21  HGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLE 80

Query: 697 ESKNG--TGDAPGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLP 867
           E  N   T      + PV+ RL+V  +Q G L+G  G  IK++   +G +++V+ + LP
Sbjct: 81  EDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139



 Score = 42.0 bits (97), Expect = 0.014
 Identities = 19/49 (38%), Positives = 31/49 (63%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           IR+L   +  G++IGK G  + +IR+E+G +I + E    C ER+I +T
Sbjct: 16  IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT 62



 Score = 40.4 bits (93), Expect = 0.040
 Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV-DEAVPGCDERVIVITTV 411
           +R++ P  +CG++IGK G  I +IR+  G +++V  + +P   ER I I  V
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGV 151



 Score = 35.8 bits (81), Expect = 0.97
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +1

Query: 727 GQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLP 867
           G    ++ RLL+   +VG ++G +G  +K++  +SG  I +S+ N P
Sbjct: 9   GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP 55

---

>Q15365:PCBP1_HUMAN Poly(rC)-binding protein 1 - Homo sapiens (Human)|
          Length = 356

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 86/356 (24%), Positives = 145/356 (40%), Gaps = 26/356 (7%)
 Frame = +1

Query: 1243 LTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPKSDDHIIIISGPAHPGDGI 1422
            LT RLL                      ++G  I I E      + II ++GP +    I
Sbjct: 14   LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN---AI 68

Query: 1423 SPAQNAILH-----VQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSK 1587
              A   I+      +   +T +T+    P   RL+V   Q G L+GKGG  + E+R+ + 
Sbjct: 69   FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128

Query: 1588 AHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRNNLFRDRMASMGPSMQP 1767
            A + V + D +P   +     + I G  +++ E + QI   +   L +     +      
Sbjct: 129  AQVQV-AGDMLPNSTE---RAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQ 184

Query: 1768 PFGLLDPQFGAFPGIHESTSPRIYPNASQFHKDFMGRPLDEMSAPWTTKGMQDVGDPMSI 1947
            P     P   A  G    +    YP+A+    D  G PLD     ++ +G   +  P+ +
Sbjct: 185  PMPASSPVICA-GGQDRCSDAAGYPHATH---DLEGPPLD----AYSIQGQHTI-SPLDL 235

Query: 1948 SGVPGMAHR--------GIGGFSGPVHSSRPIITG-------------NIMVPRLIIPAL 2064
            + +  +A +        G  GF+G + SS P + G              + +P  +I  +
Sbjct: 236  AKLNQVARQQSHFAMMHGGTGFAG-IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCI 294

Query: 2065 CGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQAFVLSE 2232
             G  G  +N IR+ SGA+I I  P+  S    V I+G+   +  A+ L+ A + SE
Sbjct: 295  IGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350



 Score = 43.9 bits (102), Expect = 0.004
 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
 Frame = +1

Query: 541 HGKEEQDD-AERGDSKEENDDSSVAKTTKLE---PERVIP--SAMNAILHVFDRIF--IT 696
           HGKE      ++G+S +   + S A+    E   PER+I      NAI   F  I   + 
Sbjct: 21  HGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLE 80

Query: 697 ESKNG--TGDAPGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLP 867
           E  N   T      + PV+ RL+V  +Q G L+G  G  IK++   +G +++V+ + LP
Sbjct: 81  EDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139



 Score = 42.0 bits (97), Expect = 0.014
 Identities = 19/49 (38%), Positives = 31/49 (63%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           IR+L   +  G++IGK G  + +IR+E+G +I + E    C ER+I +T
Sbjct: 16  IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT 62



 Score = 40.4 bits (93), Expect = 0.040
 Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV-DEAVPGCDERVIVITTV 411
           +R++ P  +CG++IGK G  I +IR+  G +++V  + +P   ER I I  V
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGV 151



 Score = 35.8 bits (81), Expect = 0.97
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +1

Query: 727 GQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLP 867
           G    ++ RLL+   +VG ++G +G  +K++  +SG  I +S+ N P
Sbjct: 9   GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP 55

---

>Q5E9A3:PCBP1_BOVIN Poly(rC)-binding protein 1 - Bos taurus (Bovine)|
          Length = 356

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 86/356 (24%), Positives = 145/356 (40%), Gaps = 26/356 (7%)
 Frame = +1

Query: 1243 LTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPKSDDHIIIISGPAHPGDGI 1422
            LT RLL                      ++G  I I E      + II ++GP +    I
Sbjct: 14   LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN---AI 68

Query: 1423 SPAQNAILH-----VQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSK 1587
              A   I+      +   +T +T+    P   RL+V   Q G L+GKGG  + E+R+ + 
Sbjct: 69   FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128

Query: 1588 AHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRNNLFRDRMASMGPSMQP 1767
            A + V + D +P   +     + I G  +++ E + QI   +   L +     +      
Sbjct: 129  AQVQV-AGDMLPNSTE---RAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQ 184

Query: 1768 PFGLLDPQFGAFPGIHESTSPRIYPNASQFHKDFMGRPLDEMSAPWTTKGMQDVGDPMSI 1947
            P     P   A  G    +    YP+A+    D  G PLD     ++ +G   +  P+ +
Sbjct: 185  PMPASSPVICA-GGQDRCSDAAGYPHATH---DLEGPPLD----AYSIQGQHTI-SPLDL 235

Query: 1948 SGVPGMAHR--------GIGGFSGPVHSSRPIITG-------------NIMVPRLIIPAL 2064
            + +  +A +        G  GF+G + SS P + G              + +P  +I  +
Sbjct: 236  AKLNQVARQQSHFAMMHGGTGFAG-IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCI 294

Query: 2065 CGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQAFVLSE 2232
             G  G  +N IR+ SGA+I I  P+  S    V I+G+   +  A+ L+ A + SE
Sbjct: 295  IGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350



 Score = 43.9 bits (102), Expect = 0.004
 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
 Frame = +1

Query: 541 HGKEEQDD-AERGDSKEENDDSSVAKTTKLE---PERVIP--SAMNAILHVFDRIF--IT 696
           HGKE      ++G+S +   + S A+    E   PER+I      NAI   F  I   + 
Sbjct: 21  HGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLE 80

Query: 697 ESKNG--TGDAPGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLP 867
           E  N   T      + PV+ RL+V  +Q G L+G  G  IK++   +G +++V+ + LP
Sbjct: 81  EDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139



 Score = 42.0 bits (97), Expect = 0.014
 Identities = 19/49 (38%), Positives = 31/49 (63%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           IR+L   +  G++IGK G  + +IR+E+G +I + E    C ER+I +T
Sbjct: 16  IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT 62



 Score = 40.4 bits (93), Expect = 0.040
 Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV-DEAVPGCDERVIVITTV 411
           +R++ P  +CG++IGK G  I +IR+  G +++V  + +P   ER I I  V
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGV 151



 Score = 35.8 bits (81), Expect = 0.97
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +1

Query: 727 GQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLP 867
           G    ++ RLL+   +VG ++G +G  +K++  +SG  I +S+ N P
Sbjct: 9   GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP 55

---

>Q15366:PCBP2_HUMAN Poly(rC)-binding protein 2 - Homo sapiens (Human)|
          Length = 365

 Score = 73.9 bits (180), Expect = 3e-12
 Identities = 91/362 (25%), Positives = 145/362 (40%), Gaps = 32/362 (8%)
 Frame = +1

Query: 1243 LTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPKSDDHIIIISGPAHPGDGI 1422
            LT RLL                      ++G  I I E      + II ++GP +    I
Sbjct: 14   LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN---AI 68

Query: 1423 SPAQNAILH-----VQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSK 1587
              A   I+      +   +T +T+    P   RL+V  +Q G L+GKGG  + E+R+ + 
Sbjct: 69   FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128

Query: 1588 AHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRNNLFRDRMASMGPSMQP 1767
            A + V + D +P   +     + I G  ++I E + QI   +   L +     +    +P
Sbjct: 129  AQVQV-AGDMLPNSTE---RAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184

Query: 1768 -----PFGLLDPQFGAFPGIHESTSPRIYPNASQFHKDFMGRPLDEMSAPWTTKGMQDVG 1932
                 P      Q     G   ++ P   P+    + D  G PL+     +T +G   + 
Sbjct: 185  KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMC-LNPDLEGPPLE----AYTIQGQYAIP 239

Query: 1933 DP---------MSISGVPGMAHRGIGGFSGPVHSSRPIITG-------------NIMVPR 2046
             P         M  S  P M H G  GFSG + SS P + G              + +P 
Sbjct: 240  QPDLTKLHQLAMQQSHFP-MTH-GNTGFSG-IESSSPEVKGYWGLDASAQTTSHELTIPN 296

Query: 2047 LIIPALCGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQAFVL 2226
             +I  + G  G  +N IR+ SGA+I I  P+  S D  V I+G+   +  A+ L+   + 
Sbjct: 297  DLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLS 356

Query: 2227 SE 2232
            SE
Sbjct: 357  SE 358



 Score = 51.2 bits (121), Expect = 2e-05
 Identities = 71/323 (21%), Positives = 126/323 (39%), Gaps = 35/323 (10%)
 Frame = +1

Query: 541  HGKEEQDD-AERGDSKEENDDSSVAKTTKLE---PERVIPSA--MNAILHVF----DRIF 690
            HGKE      ++G+S ++  + S A+    E   PER+I  A   NAI   F    D++ 
Sbjct: 21   HGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLE 80

Query: 691  ITESKNGTGDAPGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPL 870
               S + T      + PV+ RL+V  SQ G L+G  G  IK++   +G +++V+ + LP 
Sbjct: 81   EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 140

Query: 871  CALLKDELCQI-NGELDSVRKGLNAVAQVLFTHPPR--------ESDVVPIVHPSGSSSH 1023
                   +  I    ++ V++    + + L   PP+        +    P++   G   +
Sbjct: 141  STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRY 200

Query: 1024 TFDRSDGLPPGMPPNLHL--PFQGPS----HARGPFDIIDERPNVAPFSAFPDQRSNIPP 1185
            +        P   P++ L    +GP       +G + I   +P++        Q+S+ P 
Sbjct: 201  STGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAI--PQPDLTKLHQLAMQQSHFPM 258

Query: 1186 F----------SSFPDALMHGNASVPPEPLTFRLLCSSDXXXXXXXXXXXXXXXXXXDTG 1335
                       SS P+   +       +  +  L   +D                   +G
Sbjct: 259  THGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSG 318

Query: 1336 CEIKIVETVPKSDDHIIIISGPA 1404
             +IKI   V  S D  + I+G A
Sbjct: 319  AQIKIANPVEGSTDRQVTITGSA 341



 Score = 40.4 bits (93), Expect = 0.040
 Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV-DEAVPGCDERVIVITTV 411
           +R++ P  +CG++IGK G  I +IR+  G +++V  + +P   ER I I  +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGI 151



 Score = 40.0 bits (92), Expect = 0.052
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVI 402
           IR+L   +  G++IGK G  + K+R+E+G +I + E    C ER+I +
Sbjct: 16  IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITL 61



 Score = 37.4 bits (85), Expect = 0.33
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +1

Query: 727 GQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLP 867
           G    ++ RLL+   +VG ++G +G  +K+M  +SG  I +S+ N P
Sbjct: 9   GLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP 55

---

>Q61990:PCBP2_MOUSE Poly(rC)-binding protein 2 - Mus musculus (Mouse)|
          Length = 362

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 90/359 (25%), Positives = 143/359 (39%), Gaps = 29/359 (8%)
 Frame = +1

Query: 1243 LTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPKSDDHIIIISGPAHPGDGI 1422
            LT RLL                      ++G  I I E      + II ++GP +    I
Sbjct: 14   LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN---AI 68

Query: 1423 SPAQNAILH-----VQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSK 1587
              A   I+      +   +T +T+    P   RL+V  +Q G L+GKGG  + E+R+ + 
Sbjct: 69   FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128

Query: 1588 AHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRNNLFRDRMASMGPS-MQ 1764
            A + V + D +P   +     + I G  ++I E + QI   +  +  +       P    
Sbjct: 129  AQVQV-AGDMLPNSTE---RAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 184

Query: 1765 PPFGLLDPQFGAFPGIHESTSPRIYPNASQFHKDFMGRPLDEMSAPWTTKGMQDVGDP-- 1938
             P      Q     G   ++ P   P+    + D  G PL+     +T +G   +  P  
Sbjct: 185  SPVIFAGGQDRYSTGSDSASFPHTTPSMC-LNPDLEGPPLE----AYTIQGQYAIPQPDL 239

Query: 1939 -------MSISGVPGMAHRGIGGFSGPVHSSRPIITG--------------NIMVPRLII 2055
                   M  S  P M H G  GFSG + SS P + G               + +P  +I
Sbjct: 240  TKLHQLAMQQSHFP-MTH-GNTGFSG-IESSSPEVKGYWAGLDASAQTTSHELTIPNDLI 296

Query: 2056 PALCGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQAFVLSE 2232
              + G  G  +N IR+ SGA+I I  P+  S D  V I+G+   +  A+ L+   + SE
Sbjct: 297  GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSE 355



 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 72/323 (22%), Positives = 126/323 (39%), Gaps = 35/323 (10%)
 Frame = +1

Query: 541  HGKEEQDD-AERGDSKEENDDSSVAKTTKLE---PERVIPSA--MNAILHVF----DRIF 690
            HGKE      ++G+S ++  + S A+    E   PER+I  A   NAI   F    D++ 
Sbjct: 21   HGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLE 80

Query: 691  ITESKNGTGDAPGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPL 870
               S + T      + PV+ RL+V  SQ G L+G  G  IK++   +G +++V+ + LP 
Sbjct: 81   EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 140

Query: 871  CALLKDELCQINGELDSVRKGLNAVAQVLFTHPPR--------ESDVVPIVHPSGSSSHT 1026
                 +    I G   S+ + +  +  V+   PP+        +    P++   G   ++
Sbjct: 141  ST---ERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197

Query: 1027 FDRSDGLPPGMPPNLHL--PFQGPS----HARGPFDIIDERPNVAPFSAFPDQRSNIPPF 1188
                    P   P++ L    +GP       +G + I   +P++        Q+S+ P  
Sbjct: 198  TGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAI--PQPDLTKLHQLAMQQSHFPMT 255

Query: 1189 ----------SSFPDALMH-GNASVPPEPLTFRLLCSSDXXXXXXXXXXXXXXXXXXDTG 1335
                      SS P+   +        +  +  L   +D                   +G
Sbjct: 256  HGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSG 315

Query: 1336 CEIKIVETVPKSDDHIIIISGPA 1404
             +IKI   V  S D  + I+G A
Sbjct: 316  AQIKIANPVEGSTDRQVTITGSA 338



 Score = 40.4 bits (93), Expect = 0.040
 Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV-DEAVPGCDERVIVITTV 411
           +R++ P  +CG++IGK G  I +IR+  G +++V  + +P   ER I I  +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGI 151



 Score = 40.0 bits (92), Expect = 0.052
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVI 402
           IR+L   +  G++IGK G  + K+R+E+G +I + E    C ER+I +
Sbjct: 16  IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITL 61



 Score = 37.4 bits (85), Expect = 0.33
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +1

Query: 727 GQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLP 867
           G    ++ RLL+   +VG ++G +G  +K+M  +SG  I +S+ N P
Sbjct: 9   GLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP 55

---

>P57722:PCBP3_MOUSE Poly(rC)-binding protein 3 - Mus musculus (Mouse)|
          Length = 339

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 82/347 (23%), Positives = 139/347 (40%), Gaps = 17/347 (4%)
 Frame = +1

Query: 1243 LTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPKSDDHIIIISGPAHPGDGI 1422
            LT RLL                      ++G  I I E      + I+ I+GP    D I
Sbjct: 14   LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT---DAI 68

Query: 1423 SPAQNAILH-----VQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSK 1587
              A   I +     +   ++ + +  + P   RL+V  +Q G L+GKGGS + E+R+ + 
Sbjct: 69   FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128

Query: 1588 AHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRNNLFRDRMASMGPSMQP 1767
            A + V   D +P   +     V I+G  +AI + + QI   +  +              P
Sbjct: 129  AQVQVAG-DMLPNSTER---AVTISGTPDAIIQCVKQICVVMLES--------------P 170

Query: 1768 PFGLLDPQFGAFPGIHESTSPRIYPNASQF---------HKDFMGR--PLDEMSAPWTTK 1914
            P G   P +   P    +++P I+     +         H D + +   L     P+   
Sbjct: 171  PKGATIP-YRPKP----ASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPL 225

Query: 1915 GMQDVGDPMSISGVPGMAH-RGIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGGCLN 2091
            G  +   P     +      + + G S  + +S P  T  + +P  +I  + G  G  +N
Sbjct: 226  GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 285

Query: 2092 MIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQAFVLSE 2232
             IR+ SGA+I I      S +  + I+GTP  +  A+ L+ A + SE
Sbjct: 286  EIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 332



 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 75/309 (24%), Positives = 129/309 (41%), Gaps = 23/309 (7%)
 Frame = +1

Query: 541  HGKEEQDD-AERGDSKEENDDSSVAKTTKLE---PERV--IPSAMNAILHVFDRI---FI 693
            HGKE      ++G++ ++  + S A+    E   PER+  I    +AI   F  I   F 
Sbjct: 21   HGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFE 80

Query: 694  TESKNGTGDAPG-QKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPL 870
             +  N   ++P   K PV+ RL+V  SQ G L+G  GS IK++   +G +++V+ + LP 
Sbjct: 81   EDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140

Query: 871  CALLKDELCQINGELDSVRKGLNAVAQVLFTHPPRESDV--------VPIVHPSGSSSHT 1026
                 +    I+G  D++ + +  +  V+   PP+ + +         P++  +G  ++T
Sbjct: 141  ST---ERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIF-AGGQAYT 196

Query: 1027 FDRSDGLP-PGMPPNLH-LPFQGPSHARGPFDIIDERPNVAPFSAFPDQRSNIPPFSSFP 1200
                  +P P     LH L  Q     + PF  + +        AFP ++  +P  SS  
Sbjct: 197  IQGQYAIPHPDQLTKLHQLAMQ-----QTPFPPLGQTN-----PAFPGEK--LPLHSSEE 244

Query: 1201 DALMHGNAS---VPPEPLTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPKS 1371
               + G +S     P   T  L   +D                   +G +IKI      S
Sbjct: 245  AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 304

Query: 1372 DDHIIIISG 1398
             +  I I+G
Sbjct: 305  SERQITITG 313



 Score = 43.5 bits (101), Expect = 0.005
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1978 IGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITI-DEPLADSMD 2154
            I   S    +S+P +T  ++VP     +L G  G  +  IRE +GA++ +  + L +S +
Sbjct: 84   INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTE 143

Query: 2155 TPVMISGTPDQMHAARSLVQAFVLSEPP 2238
              V ISGTPD +      +   +L  PP
Sbjct: 144  RAVTISGTPDAIIQCVKQICVVMLESPP 171



 Score = 42.7 bits (99), Expect = 0.008
 Identities = 19/49 (38%), Positives = 31/49 (63%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           IR+L   +  G++IGK G  + K+R+E+G +I + E    C ER++ IT
Sbjct: 16  IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT 62



 Score = 42.7 bits (99), Expect = 0.008
 Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = +1

Query: 235 TIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV-DEAVPGCDERVIVIT 405
           T +P V L R++ P  +CG++IGK GS I +IR+  G +++V  + +P   ER + I+
Sbjct: 93  TSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTIS 149



 Score = 42.4 bits (98), Expect = 0.010
 Identities = 25/84 (29%), Positives = 42/84 (50%)
 Frame = +1

Query: 697 ESKNGTGDAPGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCA 876
           ESK   G   G    ++ RLL+   +VG ++G +G  +K+M  +SG  I +S+ N P   
Sbjct: 2   ESKVSEG---GLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP--- 55

Query: 877 LLKDELCQINGELDSVRKGLNAVA 948
              + +  I G  D++ K    +A
Sbjct: 56  ---ERIVTITGPTDAIFKAFAMIA 76

---

>P57721:PCBP3_HUMAN Poly(rC)-binding protein 3 - Homo sapiens (Human)|
          Length = 339

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 82/347 (23%), Positives = 139/347 (40%), Gaps = 17/347 (4%)
 Frame = +1

Query: 1243 LTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPKSDDHIIIISGPAHPGDGI 1422
            LT RLL                      ++G  I I E      + I+ I+GP    D I
Sbjct: 14   LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT---DAI 68

Query: 1423 SPAQNAILH-----VQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSK 1587
              A   I +     +   ++ + +  + P   RL+V  +Q G L+GKGGS + E+R+ + 
Sbjct: 69   FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128

Query: 1588 AHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRNNLFRDRMASMGPSMQP 1767
            A + V   D +P   +     V I+G  +AI + + QI   +  +              P
Sbjct: 129  AQVQVAG-DMLPNSTER---AVTISGTPDAIIQCVKQICVVMLES--------------P 170

Query: 1768 PFGLLDPQFGAFPGIHESTSPRIYPNASQF---------HKDFMGR--PLDEMSAPWTTK 1914
            P G   P +   P    +++P I+     +         H D + +   L     P+   
Sbjct: 171  PKGATIP-YRPKP----ASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPL 225

Query: 1915 GMQDVGDPMSISGVPGMAH-RGIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGGCLN 2091
            G  +   P     +      + + G S  + +S P  T  + +P  +I  + G  G  +N
Sbjct: 226  GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 285

Query: 2092 MIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQAFVLSE 2232
             IR+ SGA+I I      S +  + I+GTP  +  A+ L+ A + SE
Sbjct: 286  EIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 332



 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 75/309 (24%), Positives = 129/309 (41%), Gaps = 23/309 (7%)
 Frame = +1

Query: 541  HGKEEQDD-AERGDSKEENDDSSVAKTTKLE---PERV--IPSAMNAILHVFDRI---FI 693
            HGKE      ++G++ ++  + S A+    E   PER+  I    +AI   F  I   F 
Sbjct: 21   HGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFE 80

Query: 694  TESKNGTGDAPG-QKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPL 870
             +  N   ++P   K PV+ RL+V  SQ G L+G  GS IK++   +G +++V+ + LP 
Sbjct: 81   EDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140

Query: 871  CALLKDELCQINGELDSVRKGLNAVAQVLFTHPPRESDV--------VPIVHPSGSSSHT 1026
                 +    I+G  D++ + +  +  V+   PP+ + +         P++  +G  ++T
Sbjct: 141  ST---ERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIF-AGGQAYT 196

Query: 1027 FDRSDGLP-PGMPPNLH-LPFQGPSHARGPFDIIDERPNVAPFSAFPDQRSNIPPFSSFP 1200
                  +P P     LH L  Q     + PF  + +        AFP ++  +P  SS  
Sbjct: 197  IQGQYAIPHPDQLTKLHQLAMQ-----QTPFPPLGQTN-----PAFPGEK--LPLHSSEE 244

Query: 1201 DALMHGNAS---VPPEPLTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPKS 1371
               + G +S     P   T  L   +D                   +G +IKI      S
Sbjct: 245  AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 304

Query: 1372 DDHIIIISG 1398
             +  I I+G
Sbjct: 305  SERQITITG 313



 Score = 43.5 bits (101), Expect = 0.005
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1978 IGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITI-DEPLADSMD 2154
            I   S    +S+P +T  ++VP     +L G  G  +  IRE +GA++ +  + L +S +
Sbjct: 84   INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTE 143

Query: 2155 TPVMISGTPDQMHAARSLVQAFVLSEPP 2238
              V ISGTPD +      +   +L  PP
Sbjct: 144  RAVTISGTPDAIIQCVKQICVVMLESPP 171



 Score = 42.7 bits (99), Expect = 0.008
 Identities = 19/49 (38%), Positives = 31/49 (63%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           IR+L   +  G++IGK G  + K+R+E+G +I + E    C ER++ IT
Sbjct: 16  IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT 62



 Score = 42.7 bits (99), Expect = 0.008
 Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = +1

Query: 235 TIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV-DEAVPGCDERVIVIT 405
           T +P V L R++ P  +CG++IGK GS I +IR+  G +++V  + +P   ER + I+
Sbjct: 93  TSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTIS 149



 Score = 42.4 bits (98), Expect = 0.010
 Identities = 25/84 (29%), Positives = 42/84 (50%)
 Frame = +1

Query: 697 ESKNGTGDAPGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCA 876
           ESK   G   G    ++ RLL+   +VG ++G +G  +K+M  +SG  I +S+ N P   
Sbjct: 2   ESKVSEG---GLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP--- 55

Query: 877 LLKDELCQINGELDSVRKGLNAVA 948
              + +  I G  D++ K    +A
Sbjct: 56  ---ERIVTITGPTDAIFKAFAMIA 76

---

>Q5ZIQ3:HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K - Gallus gallus (Chicken)|
          Length = 427

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1864 DFMGRP---LDEMSAPWTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSRPIITGNI 2034
            D  GRP    D M          D+  P    G  G  +   GG         PIIT  +
Sbjct: 297  DRRGRPGDRYDGMMMQCHVDACDDMQPPELFEGGSGYDYSYAGGRGSYGDLGGPIITTQV 356

Query: 2035 MVPRLIIPALCGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQ 2214
             +P+ +  ++ G  G  +  IR  SGA I IDEPL  S D  + I+GT DQ+  A+ L+Q
Sbjct: 357  TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 416



 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +1

Query: 247 GVPLI--RILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           G P+I  ++  P +  G++IGK G  I +IR E+G  I++DE + G ++R+I IT
Sbjct: 348 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 402

---

>P61980:HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K - Rattus norvegicus (Rat)|
          Length = 463

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 50/104 (48%)
 Frame = +1

Query: 1903 WTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGG 2082
            W+    Q   +P   SG       G G +        PIIT  + +P+ +  ++ G  G 
Sbjct: 352  WSPSEWQMAYEPQGGSGYDYSYAGGRGSYGD---LGGPIITTQVTIPKDLAGSIIGKGGQ 408

Query: 2083 CLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQ 2214
             +  IR  SGA I IDEPL  S D  + I+GT DQ+  A+ L+Q
Sbjct: 409  RIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 452



 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +1

Query: 247 GVPLI--RILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           G P+I  ++  P +  G++IGK G  I +IR E+G  I++DE + G ++R+I IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438

---

>O19049:HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K - Oryctolagus cuniculus|
            (Rabbit)
          Length = 463

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 50/104 (48%)
 Frame = +1

Query: 1903 WTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGG 2082
            W+    Q   +P   SG       G G +        PIIT  + +P+ +  ++ G  G 
Sbjct: 352  WSPSEWQMAYEPQGGSGYDYSYAGGRGSYGD---LGGPIITTQVTIPKDLAGSIIGKGGQ 408

Query: 2083 CLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQ 2214
             +  IR  SGA I IDEPL  S D  + I+GT DQ+  A+ L+Q
Sbjct: 409  RIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 452



 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +1

Query: 247 GVPLI--RILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           G P+I  ++  P +  G++IGK G  I +IR E+G  I++DE + G ++R+I IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438

---

>Q5R5H8:HNRPK_PONPY Heterogeneous nuclear ribonucleoprotein K - Pongo pygmaeus|
            (Orangutan)
          Length = 464

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 50/104 (48%)
 Frame = +1

Query: 1903 WTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGG 2082
            W+    Q   +P   SG       G G +        PIIT  + +P+ +  ++ G  G 
Sbjct: 352  WSPSEWQMAYEPQGGSGYDYSYAGGRGSYGD---LGGPIITTQVTIPKDLAGSIIGKGGQ 408

Query: 2083 CLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQ 2214
             +  IR  SGA I IDEPL  S D  + I+GT DQ+  A+ L+Q
Sbjct: 409  RIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 452



 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +1

Query: 247 GVPLI--RILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           G P+I  ++  P +  G++IGK G  I +IR E+G  I++DE + G ++R+I IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438

---

>P61979:HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K - Mus musculus (Mouse)|
          Length = 463

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 50/104 (48%)
 Frame = +1

Query: 1903 WTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGG 2082
            W+    Q   +P   SG       G G +        PIIT  + +P+ +  ++ G  G 
Sbjct: 352  WSPSEWQMAYEPQGGSGYDYSYAGGRGSYGD---LGGPIITTQVTIPKDLAGSIIGKGGQ 408

Query: 2083 CLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQ 2214
             +  IR  SGA I IDEPL  S D  + I+GT DQ+  A+ L+Q
Sbjct: 409  RIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 452



 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +1

Query: 247 GVPLI--RILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           G P+I  ++  P +  G++IGK G  I +IR E+G  I++DE + G ++R+I IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438

---

>Q4R4M6:HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K - Macaca fascicularis (Crab|
            eating macaque) (Cynomolgus monkey)
          Length = 464

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 50/104 (48%)
 Frame = +1

Query: 1903 WTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGG 2082
            W+    Q   +P   SG       G G +        PIIT  + +P+ +  ++ G  G 
Sbjct: 352  WSPSEWQMAYEPQGGSGYDYSYAGGRGSYGD---LGGPIITTQVTIPKDLAGSIIGKGGQ 408

Query: 2083 CLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQ 2214
             +  IR  SGA I IDEPL  S D  + I+GT DQ+  A+ L+Q
Sbjct: 409  RIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 452



 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +1

Query: 247 GVPLI--RILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           G P+I  ++  P +  G++IGK G  I +IR E+G  I++DE + G ++R+I IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438

---

>P61978:HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K - Homo sapiens (Human)|
          Length = 463

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 50/104 (48%)
 Frame = +1

Query: 1903 WTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGG 2082
            W+    Q   +P   SG       G G +        PIIT  + +P+ +  ++ G  G 
Sbjct: 352  WSPSEWQMAYEPQGGSGYDYSYAGGRGSYGD---LGGPIITTQVTIPKDLAGSIIGKGGQ 408

Query: 2083 CLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQ 2214
             +  IR  SGA I IDEPL  S D  + I+GT DQ+  A+ L+Q
Sbjct: 409  RIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 452



 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +1

Query: 247 GVPLI--RILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           G P+I  ++  P +  G++IGK G  I +IR E+G  I++DE + G ++R+I IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438

---

>Q3T0D0:HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K - Bos taurus (Bovine)|
          Length = 464

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 50/104 (48%)
 Frame = +1

Query: 1903 WTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGG 2082
            W+    Q   +P   SG       G G +        PIIT  + +P+ +  ++ G  G 
Sbjct: 352  WSPSEWQMAYEPQGGSGYDYSYAGGRGSYGD---LGGPIITTQVTIPKDLAGSIIGKGGQ 408

Query: 2083 CLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQ 2214
             +  IR  SGA I IDEPL  S D  + I+GT DQ+  A+ L+Q
Sbjct: 409  RIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 452



 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +1

Query: 247 GVPLI--RILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT 405
           G P+I  ++  P +  G++IGK G  I +IR E+G  I++DE + G ++R+I IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438

---

>P38151:PBP2_YEAST PAB1-binding protein 2 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 413

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 72/355 (20%), Positives = 125/355 (35%), Gaps = 22/355 (6%)
 Frame = +1

Query: 1213 HGNASVPPEPLTFRLLCSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETVPKSDDHIIII 1392
            H +    P  +  R+LC                     +T   I I   +    + I+ +
Sbjct: 57   HDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYV 116

Query: 1393 SGPAHPGDGISPAQNAILHVQRKITPTTSNKEGPALS-RLIVSPNQVGCLLGKGGSIMAE 1569
             G     D ++ A   I+    +      N E   +S  L++  + +GC++GK GS + E
Sbjct: 117  RGTC---DDVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLRE 173

Query: 1570 MRKLSKAHI------IVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRNNLFR 1731
            +  LS A +      ++LS D+I          + I G  +AI  A   I+  L N    
Sbjct: 174  IEDLSAAKLFASPNQLLLSNDRI----------LTINGVPDAIHIATFYISQTLLN---- 219

Query: 1732 DRMASMGPSMQPPFGLLDPQFGAFPGIHESTSPRIYPNASQFH--------KDFMGRPLD 1887
             +M S   +++        QF +    H   +   +    Q+H        K     P+ 
Sbjct: 220  FQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPIS 279

Query: 1888 EMSAPWTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSRP-------IITGNIMVPR 2046
                   T          + +  P      +    GPV S  P        +   I +  
Sbjct: 280  STLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDE 339

Query: 2047 LIIPALCGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLV 2211
              +  + G DG  +N ++E +G  I I +P+  S +  + I GT     AA  L+
Sbjct: 340  KFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRGTFMASQAAIMLI 394



 Score = 35.4 bits (80), Expect = 1.3
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVI 402
           +R+LC  +    ++G  G+ I++I+ E   +I +   + G  ER++ +
Sbjct: 69  LRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYV 116

---

>P38199:YBD2_YEAST KH domain-containing protein YBL032W - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 381

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 53/234 (22%), Positives = 90/234 (38%)
 Frame = +1

Query: 262 RILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVITTVEKDKEASHEQ 441
           R+L   +    +IG  GS I++IR  N VKI + E VPGC +R++          A +  
Sbjct: 47  RLLLSLKEAAKIIGTKGSTISRIRAANAVKIGISEKVPGCSDRILSC--------AGNVI 98

Query: 442 GKQNDDGTAVSGDGXXXXXXXXXXXXXXXXXNAHGKEEQDDAERGDSKEENDDSSVAKTT 621
              N  G  V                     N    E +D AE G+++E           
Sbjct: 99  NVANAIGDIVD------------------VLNKRNPENEDAAE-GEAEE----------- 128

Query: 622 KLEPERVIPSAMNAILHVFDRIFITESKNGTGDAPGQKTPVSFRLLVLDSQVGPLLGIRG 801
                       +   H  + I    SK+   D    +     RL+V +S +  ++G  G
Sbjct: 129 ------------HYYFHFLNHILPAPSKDEIRDLQQLEDIGYVRLIVANSHISSIIGKAG 176

Query: 802 SVIKQMSADSGCEIRVSKENLPLCALLKDELCQINGELDSVRKGLNAVAQVLFT 963
           + IK +    G +I  SK+ LP      + + +I G   S+   L  +++++ +
Sbjct: 177 ATIKSLINKHGVKIVASKDFLPAS---DERIIEIQGFPGSITNVLIEISEIILS 227



 Score = 35.4 bits (80), Expect = 1.3
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
 Frame = +1

Query: 211 APSQQPQMTIQP--GVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVD-EAVPGC 381
           APS+     +Q    +  +R++       ++IGKAG+ I  +  ++GVKI    + +P  
Sbjct: 141 APSKDEIRDLQQLEDIGYVRLIVANSHISSIIGKAGATIKSLINKHGVKIVASKDFLPAS 200

Query: 382 DERVIVI 402
           DER+I I
Sbjct: 201 DERIIEI 207



 Score = 33.9 bits (76), Expect = 3.7
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
 Frame = +1

Query: 712 TGDAPGQKTP----VSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCAL 879
           TG AP   T     ++ RLL+   +   ++G +GS I ++ A +  +I +S E +P C+ 
Sbjct: 30  TGGAPVVGTTAQPTINHRLLLSLKEAAKIIGTKGSTISRIRAANAVKIGIS-EKVPGCS- 87

Query: 880 LKDELCQINGELDSVRKGLNAVAQVLFTHPPRESD 984
             D +    G + +V   +  +  VL    P   D
Sbjct: 88  --DRILSCAGNVINVANAIGDIVDVLNKRNPENED 120

---

>P57723:PCBP4_HUMAN Poly(rC)-binding protein 4 - Homo sapiens (Human)|
          Length = 403

 Score = 49.3 bits (116), Expect = 9e-05
 Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 1/243 (0%)
 Frame = +1

Query: 1492 PALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDS 1671
            P   RL++  +Q G L+GK G+ + E+R+ + A + V + D +P   +     V ++G  
Sbjct: 101  PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV-AGDLLPNSTE---RAVTVSGVP 156

Query: 1672 EAIQEALMQITARLRNNLFRDRMASMGPSMQPPFGLLDPQFG-AFPGIHESTSPRIYPNA 1848
            +AI   + QI A +  +  +       PS+     LL    G +  G + + +P      
Sbjct: 157  DAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKL 216

Query: 1849 SQFHKDFMGRPLDEMSAPWTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSRPIITG 2028
             Q         L   + P+ T            S VPG+         G   SS+     
Sbjct: 217  QQ---------LSSHAVPFATP-----------SVVPGLD-------PGTQTSSQ----- 244

Query: 2029 NIMVPRLIIPALCGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSL 2208
              +VP  +I  + G  G  ++ IR+ SGA I I      + +  V I+G+P  +  A+ L
Sbjct: 245  EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304

Query: 2209 VQA 2217
            + A
Sbjct: 305  ITA 307



 Score = 47.0 bits (110), Expect = 4e-04
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
 Frame = +1

Query: 541  HGKEEQDD-AERGDSKEENDDSSVAKTTKLE---PERV--IPSAMNAILHVFDRI-FITE 699
            HGKE      ++G++ +   + S A+ T  E   PER+  I  +  A+ H    I F  +
Sbjct: 25   HGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLD 84

Query: 700  SKNGTGDAPG---QKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPL 870
                   A G    + PV+ RL++  SQ G L+G  G+ IK++   +G +++V+ + LP 
Sbjct: 85   EDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPN 144

Query: 871  CALLKDELCQINGELDSVRKGLNAVAQVLFTHPPRESDVVPIVHPS 1008
                 +    ++G  D++   +  +  V+   PP+ + +    HPS
Sbjct: 145  ST---ERAVTVSGVPDAIILCVRQICAVILESPPKGATIP--YHPS 185



 Score = 42.4 bits (98), Expect = 0.010
 Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV-DEAVPGCDERVIVITTV 411
           +R++ P  +CG++IGKAG+ I +IR+  G +++V  + +P   ER + ++ V
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGV 155



 Score = 40.8 bits (94), Expect = 0.030
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +1

Query: 2008 SRPIITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITI-DEPLADSMDTPVMISGTPD 2184
            SRP +T  +++P     +L G  G  +  IRE +GA++ +  + L +S +  V +SG PD
Sbjct: 98   SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD 157

Query: 2185 QMHAARSLVQAFVLSEPP 2238
             +      + A +L  PP
Sbjct: 158  AIILCVRQICAVILESPP 175



 Score = 34.7 bits (78), Expect = 2.2
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +1

Query: 1510 IVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAE-VVQITGDSEAIQE 1686
            +V  + +GC++G+ GS ++E+R++S AHI      KI    +   E  V ITG   +I  
Sbjct: 247  LVPNDLIGCVIGRQGSKISEIRQMSGAHI------KIGNQAEGAGERHVTITGSPVSIAL 300

Query: 1687 ALMQITARL 1713
            A   ITA L
Sbjct: 301  AQYLITACL 309

---

>Q0VCU0:PCBP4_BOVIN Poly(rC)-binding protein 4 - Bos taurus (Bovine)|
          Length = 403

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 1/243 (0%)
 Frame = +1

Query: 1492 PALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDS 1671
            P   RL++  +Q G L+GK G+ + E+R+ + A + V + D +P   +     V ++G  
Sbjct: 101  PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV-AGDLLPNSTE---RAVTVSGVP 156

Query: 1672 EAIQEALMQITARLRNNLFRDRMASMGPSMQPPFGLLDPQFG-AFPGIHESTSPRIYPNA 1848
            +AI   + QI A +  +  +       PS+     LL    G +  G + + +P      
Sbjct: 157  DAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKL 216

Query: 1849 SQFHKDFMGRPLDEMSAPWTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSRPIITG 2028
             Q         L   + P+ +  M           VPG+              S    + 
Sbjct: 217  QQ---------LSGHAVPFASPSM-----------VPGL------------DPSTQTSSQ 244

Query: 2029 NIMVPRLIIPALCGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMHAARSL 2208
              +VP  +I  + G  G  ++ IR+ SGA I I      + +  V I+G+P  +  A+ L
Sbjct: 245  EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304

Query: 2209 VQA 2217
            + A
Sbjct: 305  ITA 307



 Score = 47.0 bits (110), Expect = 4e-04
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
 Frame = +1

Query: 541  HGKEEQDD-AERGDSKEENDDSSVAKTTKLE---PERV--IPSAMNAILHVFDRI-FITE 699
            HGKE      ++G++ +   + S A+ T  E   PER+  I  +  A+ H    I F  +
Sbjct: 25   HGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLD 84

Query: 700  SKNGTGDAPG---QKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPL 870
                   A G    + PV+ RL++  SQ G L+G  G+ IK++   +G +++V+ + LP 
Sbjct: 85   EDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPN 144

Query: 871  CALLKDELCQINGELDSVRKGLNAVAQVLFTHPPRESDVVPIVHPS 1008
                 +    ++G  D++   +  +  V+   PP+ + +    HPS
Sbjct: 145  ST---ERAVTVSGVPDAIILCVRQICAVILESPPKGATIP--YHPS 185



 Score = 42.4 bits (98), Expect = 0.010
 Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV-DEAVPGCDERVIVITTV 411
           +R++ P  +CG++IGKAG+ I +IR+  G +++V  + +P   ER + ++ V
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGV 155



 Score = 40.8 bits (94), Expect = 0.030
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +1

Query: 2008 SRPIITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITI-DEPLADSMDTPVMISGTPD 2184
            SRP +T  +++P     +L G  G  +  IRE +GA++ +  + L +S +  V +SG PD
Sbjct: 98   SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD 157

Query: 2185 QMHAARSLVQAFVLSEPP 2238
             +      + A +L  PP
Sbjct: 158  AIILCVRQICAVILESPP 175



 Score = 38.5 bits (88), Expect = 0.15
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = +1

Query: 211 APSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDER 390
           +PS  P +           L P +  G VIG+ GS I++IR+ +G  I++     G  ER
Sbjct: 228 SPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGER 287

Query: 391 VIVIT 405
            + IT
Sbjct: 288 HVTIT 292



 Score = 34.7 bits (78), Expect = 2.2
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +1

Query: 1510 IVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAE-VVQITGDSEAIQE 1686
            +V  + +GC++G+ GS ++E+R++S AHI      KI    +   E  V ITG   +I  
Sbjct: 247  LVPNDLIGCVIGRQGSKISEIRQMSGAHI------KIGNQAEGAGERHVTITGSPVSIAL 300

Query: 1687 ALMQITARL 1713
            A   ITA L
Sbjct: 301  AQYLITACL 309

---

>P57724:PCBP4_MOUSE Poly(rC)-binding protein 4 - Mus musculus (Mouse)|
          Length = 403

 Score = 47.0 bits (110), Expect = 4e-04
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
 Frame = +1

Query: 541  HGKEEQDD-AERGDSKEENDDSSVAKTTKLE---PERV--IPSAMNAILHVFDRI-FITE 699
            HGKE      ++G++ +   + S A+ T  E   PER+  I  +  A+ H    I F  +
Sbjct: 25   HGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLD 84

Query: 700  SKNGTGDAPG---QKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPL 870
                   A G    + PV+ RL++  SQ G L+G  G+ IK++   +G +++V+ + LP 
Sbjct: 85   EDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPN 144

Query: 871  CALLKDELCQINGELDSVRKGLNAVAQVLFTHPPRESDVVPIVHPS 1008
                 +    ++G  D++   +  +  V+   PP+ + +    HPS
Sbjct: 145  ST---ERAVTVSGVPDAIILCVRQICAVILESPPKGATIP--YHPS 185



 Score = 43.1 bits (100), Expect = 0.006
 Identities = 65/308 (21%), Positives = 120/308 (38%), Gaps = 63/308 (20%)
 Frame = +1

Query: 1483 KEGPALS-----RLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAE 1647
            +EGP LS     R+++   +VG ++GK G  +  +R+ S A  I +S+   P        
Sbjct: 9    EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSAR-ITISEGSCPE------R 61

Query: 1648 VVQITGDSEAIQEALMQITARLRNNLFRDRMASMGPSMQPPFGLL----DPQFGAFPG-- 1809
            +  ITG + A+  A+  I  +L  +L     A+ G   +PP  L       Q G+  G  
Sbjct: 62   ITTITGSTAAVFHAVSMIAFKLDEDLCA-APANGGSVSRPPVTLRLVIPASQCGSLIGKA 120

Query: 1810 ------IHESTSPRI------YPNASQ--------------------------------- 1854
                  I E+T  ++       PN+++                                 
Sbjct: 121  GTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180

Query: 1855 -FHKDF-MGRPLDEMSAPWTTKGMQDVGDPMSISGVPGMAHRGIGGFSGP-----VHSSR 2013
             +H    +G  L   +  ++ +G      P  ++ +  ++   +  F+ P     +  S 
Sbjct: 181  PYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAV-PFASPSVVPGMDPST 239

Query: 2014 PIITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMISGTPDQMH 2193
               +   +VP  +I  + G  G  ++ IR+ SGA I I      + +  V I+G+P  + 
Sbjct: 240  QTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIA 299

Query: 2194 AARSLVQA 2217
             A+ L+ A
Sbjct: 300  LAQYLITA 307



 Score = 42.4 bits (98), Expect = 0.010
 Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV-DEAVPGCDERVIVITTV 411
           +R++ P  +CG++IGKAG+ I +IR+  G +++V  + +P   ER + ++ V
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGV 155



 Score = 40.8 bits (94), Expect = 0.030
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +1

Query: 2008 SRPIITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITI-DEPLADSMDTPVMISGTPD 2184
            SRP +T  +++P     +L G  G  +  IRE +GA++ +  + L +S +  V +SG PD
Sbjct: 98   SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD 157

Query: 2185 QMHAARSLVQAFVLSEPP 2238
             +      + A +L  PP
Sbjct: 158  AIILCVRQICAVILESPP 175



 Score = 38.9 bits (89), Expect = 0.12
 Identities = 22/65 (33%), Positives = 32/65 (49%)
 Frame = +1

Query: 211 APSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDER 390
           +PS  P M           L P +  G VIG+ GS I++IR+ +G  I++     G  ER
Sbjct: 228 SPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGER 287

Query: 391 VIVIT 405
            + IT
Sbjct: 288 HVTIT 292



 Score = 35.4 bits (80), Expect = 1.3
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = +1

Query: 1435 NAILHVQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKD 1614
            +A+      + P        +    +V  + +GC++G+ GS ++E+R++S AHI      
Sbjct: 222  HAVPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI------ 275

Query: 1615 KIPRGVQNIAE-VVQITGDSEAIQEALMQITARL 1713
            KI    +   E  V ITG   +I  A   ITA L
Sbjct: 276  KIGNQAEGAGERHVTITGSPVSIALAQYLITACL 309

---

>Q91WJ8:FUBP1_MOUSE Far upstream element-binding protein 1 - Mus musculus (Mouse)|
          Length = 651

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 75/328 (22%), Positives = 137/328 (41%), Gaps = 32/328 (9%)
 Frame = +1

Query: 1327 DTGCEIKIVETVPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTS--NKEGP-- 1494
            ++GC+I+I        +   +++G     + +  A+  +  +  K  P     + +GP  
Sbjct: 125  ESGCKIQIAPDSGGLPERSCMLTGTP---ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGN 181

Query: 1495 ALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIA--EVVQITGD 1668
            A+  +++  ++ G ++GKGG  + ++++ +   +++     I  G QN    + ++ITGD
Sbjct: 182  AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVM-----IQDGPQNTGADKPLRITGD 236

Query: 1669 SEAIQEALMQITARLRN-NLFRDRMASMGPSMQPPFGLLDP----QFGAFPGIHESTSPR 1833
               +Q+A   +   +R+   FR+     G  +    G+  P      G   G +     +
Sbjct: 237  PYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKK 296

Query: 1834 IYPNAS---QFHKD----------FMGRP-LDEMSAPWTTKGMQDV--GDPMSISGVPGM 1965
            I  +A    QF  D            G P   + +A   T  ++ V  G+P    G PG 
Sbjct: 297  IQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNP----GGPGP 352

Query: 1966 AHRGIGGFSGPVHSSRP--IITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITIDE-- 2133
              RG G   G  +   P  +   N +VP      + G  G  +  I + SGA+I +    
Sbjct: 353  GGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRSP 412

Query: 2134 -PLADSMDTPVMISGTPDQMHAARSLVQ 2214
             P AD       I GTP Q+  AR L++
Sbjct: 413  PPNADPNMKLFTIRGTPQQIDYARQLIE 440



 Score = 42.7 bits (99), Expect = 0.008
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
 Frame = +1

Query: 1930 GDPMSISGVPGMAHRGIGGFSGPVHS--SRPIITGNIMVPRLIIPALCGHDGGCLNMIRE 2103
            GD      VP   +   G    P+H   SR ++T    VP  ++  + G  G  ++ I++
Sbjct: 66   GDQPDAKKVPPQ-NDSFGAQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQ 124

Query: 2104 FSGAKITIDEPLADSMDTPVMISGTPDQMHAARSLVQAFVLSEPPAP 2244
             SG KI I        +   M++GTP+ + +A+ L+   V    PAP
Sbjct: 125  ESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAP 171



 Score = 32.7 bits (73), Expect = 8.2
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +1

Query: 760 VLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCALLKDELCQINGELDSVRKGLN 939
           V D  VG ++G  G  I ++  +SGC+I+++    P    L +  C + G  +SV+    
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIA----PDSGGLPERSCMLTGTPESVQSAKR 158

Query: 940 AVAQVL 957
            + Q++
Sbjct: 159 LLDQIV 164

---

>Q96AE4:FUBP1_HUMAN Far upstream element-binding protein 1 - Homo sapiens (Human)|
          Length = 644

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 75/328 (22%), Positives = 137/328 (41%), Gaps = 32/328 (9%)
 Frame = +1

Query: 1327 DTGCEIKIVETVPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTS--NKEGP-- 1494
            ++GC+I+I        +   +++G     + +  A+  +  +  K  P     + +GP  
Sbjct: 129  ESGCKIQIAPDSGGLPERSCMLTGTP---ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGN 185

Query: 1495 ALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIA--EVVQITGD 1668
            A+  +++  ++ G ++GKGG  + ++++ +   +++     I  G QN    + ++ITGD
Sbjct: 186  AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVM-----IQDGPQNTGADKPLRITGD 240

Query: 1669 SEAIQEALMQITARLRN-NLFRDRMASMGPSMQPPFGLLDP----QFGAFPGIHESTSPR 1833
               +Q+A   +   +R+   FR+     G  +    G+  P      G   G +     +
Sbjct: 241  PYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKK 300

Query: 1834 IYPNAS---QFHKD----------FMGRP-LDEMSAPWTTKGMQDV--GDPMSISGVPGM 1965
            I  +A    QF  D            G P   + +A   T  ++ V  G+P    G PG 
Sbjct: 301  IQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNP----GGPGP 356

Query: 1966 AHRGIGGFSGPVHSSRP--IITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITIDE-- 2133
              RG G   G  +   P  +   N +VP      + G  G  +  I + SGA+I +    
Sbjct: 357  GGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNP 416

Query: 2134 -PLADSMDTPVMISGTPDQMHAARSLVQ 2214
             P AD       I GTP Q+  AR L++
Sbjct: 417  PPNADPNMKLFTIRGTPQQIDYARQLIE 444



 Score = 42.4 bits (98), Expect = 0.010
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +1

Query: 1996 PVHS--SRPIITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITIDEPLADSMDTPVMI 2169
            P+H   SR ++T    VP  ++  + G  G  ++ I++ SG KI I        +   M+
Sbjct: 91   PMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCML 150

Query: 2170 SGTPDQMHAARSLVQAFVLSEPPAP 2244
            +GTP+ + +A+ L+   V    PAP
Sbjct: 151  TGTPESVQSAKRLLDQIVEKGRPAP 175



 Score = 32.7 bits (73), Expect = 8.2
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +1

Query: 760 VLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCALLKDELCQINGELDSVRKGLN 939
           V D  VG ++G  G  I ++  +SGC+I+++    P    L +  C + G  +SV+    
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIA----PDSGGLPERSCMLTGTPESVQSAKR 162

Query: 940 AVAQVL 957
            + Q++
Sbjct: 163 LLDQIV 168

---

>Q80WA4:NOVA1_RAT RNA-binding protein Nova-1 - Rattus norvegicus (Rat)|
          Length = 474

 Score = 42.4 bits (98), Expect = 0.010
 Identities = 32/95 (33%), Positives = 48/95 (50%)
 Frame = +1

Query: 1429 AQNAILHVQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLS 1608
            A +AIL  ++    T  +K+   +  + V  N VG +LGKGG  + E ++L+ A I +  
Sbjct: 381  AASAILGTEKS---TDGSKD---VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 434

Query: 1609 KDKIPRGVQNIAEVVQITGDSEAIQEALMQITARL 1713
            K +   G +N    V ITG   A Q A   IT R+
Sbjct: 435  KGEFVPGTRN--RKVTITGTPAATQAAQYLITQRI 467



 Score = 40.4 bits (93), Expect = 0.040
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
 Frame = +1

Query: 199 KTKHAPSQQPQMTIQPG-VPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVP 375
           KT+     QPQ T+ P  +  ++I+ P    G +IGK G+ +  I +++G  +++ +   
Sbjct: 128 KTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 187

Query: 376 GCD--ERVIVIT 405
           G +  ERV+ ++
Sbjct: 188 GINLQERVVTVS 199



 Score = 33.5 bits (75), Expect = 4.8
 Identities = 21/84 (25%), Positives = 44/84 (52%)
 Frame = +1

Query: 1471 TTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEV 1650
            TT N +     ++IV  +  G ++GKGG+ +  + + S A + +  K   P G+     V
Sbjct: 139  TTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK---PDGINLQERV 195

Query: 1651 VQITGDSEAIQEALMQITARLRNN 1722
            V ++G+ E  ++A+  I  +++ +
Sbjct: 196  VTVSGEPEQNRKAVELIIQKIQED 219

---

>Q9JKN6:NOVA1_MOUSE RNA-binding protein Nova-1 - Mus musculus (Mouse)|
          Length = 507

 Score = 42.4 bits (98), Expect = 0.010
 Identities = 32/95 (33%), Positives = 48/95 (50%)
 Frame = +1

Query: 1429 AQNAILHVQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLS 1608
            A +AIL  ++    T  +K+   +  + V  N VG +LGKGG  + E ++L+ A I +  
Sbjct: 406  AASAILGTEKS---TDGSKD---VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 459

Query: 1609 KDKIPRGVQNIAEVVQITGDSEAIQEALMQITARL 1713
            K +   G +N    V ITG   A Q A   IT R+
Sbjct: 460  KGEFVPGTRN--RKVTITGTPAATQAAQYLITQRI 492



 Score = 39.3 bits (90), Expect = 0.088
 Identities = 55/258 (21%), Positives = 93/258 (36%), Gaps = 3/258 (1%)
 Frame = +1

Query: 1471 TTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHI-IVLSKDKIPRGVQNIAE 1647
            T + ++G    ++++     G ++GKGG  + +++K + A I +  SKD  P   +    
Sbjct: 42   TNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTE---R 98

Query: 1648 VVQITGDSEAIQEALMQITARLRNNLFRDRMASMGPSMQPPFGLLDPQFGAFPGIHESTS 1827
            V  I G  EA+      I  ++R             +   P  +L PQ    P   + T 
Sbjct: 99   VCLIQGTIEALNAVHGFIAEKIRE-------MPQNVAKTEPVSILQPQTTVNPDRIKQTL 151

Query: 1828 PRIYPNASQFHKDFMGRPLDEMSAPWTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHS 2007
            P                     S+P TTK      DPM+ S    +              
Sbjct: 152  P---------------------SSPTTTK--SSPSDPMTTSRANQV-------------- 174

Query: 2008 SRPIITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITIDEPL--ADSMDTPVMISGTP 2181
                    I+VP      + G  G  +  I E SGA + + +     +  +  V +SG P
Sbjct: 175  -------KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEP 227

Query: 2182 DQMHAARSLVQAFVLSEP 2235
            +Q   A  L+   +  +P
Sbjct: 228  EQNRKAVELIIQKIQEDP 245



 Score = 33.1 bits (74), Expect = 6.3
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
 Frame = +1

Query: 202 TKHAPSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGC 381
           TK +PS  P  T +     ++I+ P    G +IGK G+ +  I +++G  +++ +   G 
Sbjct: 158 TKSSPSD-PMTTSRANQ--VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI 214

Query: 382 D--ERVIVIT 405
           +  ERV+ ++
Sbjct: 215 NLQERVVTVS 224

---

>Q2PFW9:NOVA1_MACFA RNA-binding protein Nova-1 - Macaca fascicularis (Crab eating|
            macaque) (Cynomolgus monkey)
          Length = 483

 Score = 42.4 bits (98), Expect = 0.010
 Identities = 32/95 (33%), Positives = 48/95 (50%)
 Frame = +1

Query: 1429 AQNAILHVQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLS 1608
            A +AIL  ++    T  +K+   +  + V  N VG +LGKGG  + E ++L+ A I +  
Sbjct: 382  AASAILGTEKS---TDGSKD---VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 435

Query: 1609 KDKIPRGVQNIAEVVQITGDSEAIQEALMQITARL 1713
            K +   G +N    V ITG   A Q A   IT R+
Sbjct: 436  KGEFVPGTRN--RKVTITGTPAATQAAQYLITQRI 468



 Score = 40.4 bits (93), Expect = 0.040
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
 Frame = +1

Query: 199 KTKHAPSQQPQMTIQPG-VPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVP 375
           KT+     QPQ T+ P  +  ++I+ P    G +IGK G+ +  I +++G  +++ +   
Sbjct: 129 KTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 188

Query: 376 GCD--ERVIVIT 405
           G +  ERV+ ++
Sbjct: 189 GINLQERVVTVS 200



 Score = 33.5 bits (75), Expect = 4.8
 Identities = 21/84 (25%), Positives = 44/84 (52%)
 Frame = +1

Query: 1471 TTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEV 1650
            TT N +     ++IV  +  G ++GKGG+ +  + + S A + +  K   P G+     V
Sbjct: 140  TTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK---PDGINLQERV 196

Query: 1651 VQITGDSEAIQEALMQITARLRNN 1722
            V ++G+ E  ++A+  I  +++ +
Sbjct: 197  VTVSGEPEQNRKAVELIIQKIQED 220

---

>P51513:NOVA1_HUMAN RNA-binding protein Nova-1 - Homo sapiens (Human)|
          Length = 510

 Score = 42.4 bits (98), Expect = 0.010
 Identities = 32/95 (33%), Positives = 48/95 (50%)
 Frame = +1

Query: 1429 AQNAILHVQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLS 1608
            A +AIL  ++    T  +K+   +  + V  N VG +LGKGG  + E ++L+ A I +  
Sbjct: 409  AASAILGTEKS---TDGSKD---VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 462

Query: 1609 KDKIPRGVQNIAEVVQITGDSEAIQEALMQITARL 1713
            K +   G +N    V ITG   A Q A   IT R+
Sbjct: 463  KGEFVPGTRN--RKVTITGTPAATQAAQYLITQRI 495



 Score = 37.7 bits (86), Expect = 0.26
 Identities = 54/261 (20%), Positives = 93/261 (35%), Gaps = 6/261 (2%)
 Frame = +1

Query: 1471 TTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHI----IVLSKDKIPRGVQN 1638
            T + ++G    ++++     G ++GKGG  + +++K + A I    +  SKD  P   + 
Sbjct: 42   TNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTE- 100

Query: 1639 IAEVVQITGDSEAIQEALMQITARLRNNLFRDRMASMGPSMQPPFGLLDPQFGAFPGIHE 1818
               V  I G  EA+      I  ++R             +   P  +L PQ    P   +
Sbjct: 101  --RVCLIQGTVEALNAVHGFIAEKIRE-------MPQNVAKTEPVSILQPQTTVNPDRIK 151

Query: 1819 STSPRIYPNASQFHKDFMGRPLDEMSAPWTTKGMQDVGDPMSISGVPGMAHRGIGGFSGP 1998
             T P                     S+P TTK      DPM+ S    +           
Sbjct: 152  QTLP---------------------SSPTTTK--SSPSDPMTTSRANQV----------- 177

Query: 1999 VHSSRPIITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITIDEPL--ADSMDTPVMIS 2172
                       I+VP      + G  G  +  + E SGA + + +     +  +  V +S
Sbjct: 178  ----------KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVS 227

Query: 2173 GTPDQMHAARSLVQAFVLSEP 2235
            G P+Q   A  L+   +  +P
Sbjct: 228  GEPEQNRKAVELIIQKIQEDP 248



 Score = 32.7 bits (73), Expect = 8.2
 Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
 Frame = +1

Query: 202 TKHAPSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGC 381
           TK +PS  P  T +     ++I+ P    G +IGK G+ +  + +++G  +++ +   G 
Sbjct: 161 TKSSPSD-PMTTSRANQ--VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI 217

Query: 382 D--ERVIVIT 405
           +  ERV+ ++
Sbjct: 218 NLQERVVTVS 227

---

>Q96I24:FUBP3_HUMAN Far upstream element-binding protein 3 - Homo sapiens (Human)|
          Length = 572

 Score = 42.0 bits (97), Expect = 0.014
 Identities = 23/83 (27%), Positives = 41/83 (49%)
 Frame = +1

Query: 1975 GIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGGCLNMIREFSGAKITIDEPLADSMD 2154
            G+G   G +   R +IT    VP  ++  + G  G  ++ I+  SG KI I    +   +
Sbjct: 63   GVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE 122

Query: 2155 TPVMISGTPDQMHAARSLVQAFV 2223
             P +++GTP+ +  A+ L+   V
Sbjct: 123  RPCVLTGTPESIEQAKRLLGQIV 145



 Score = 40.4 bits (93), Expect = 0.040
 Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 13/248 (5%)
 Frame = +1

Query: 274 PTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT-TVEKDKEASHEQGK- 447
           P +  G +IG+ G  I++I+ E+G KI++     G  ER  V+T T E  ++A    G+ 
Sbjct: 85  PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144

Query: 448 ----QNDDGTAVSGDGXXXXXXXXXXXXXXXXXNAHGKEE-QDDAERGDSKEENDDSSVA 612
               +N  G     D                     G E  +   ER   K         
Sbjct: 145 VDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPL 204

Query: 613 KTTKLEPERV------IPSAMNAILHVFDRIFITESKNGTGDAPGQKTPVSFRLLVLDSQ 774
            T   +P R+      +  A   +L +       + +   GD   +    S  + V    
Sbjct: 205 PTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVSVPRFA 264

Query: 775 VGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCALLKDELCQINGELDSVRKGLNAVAQV 954
           VG ++G  G +IK++  D+G  I+   ++     +  +   Q+ G  D  +   + ++++
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDD----GISPERAAQVMGPPDRCQHAAHIISEL 320

Query: 955 LFTHPPRE 978
           + T   R+
Sbjct: 321 ILTAQERD 328



 Score = 39.3 bits (90), Expect = 0.088
 Identities = 21/84 (25%), Positives = 44/84 (52%)
 Frame = +1

Query: 706 NGTGDAPGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCALLK 885
           N  G    Q+T ++    V D  VG ++G  G  I ++ A+SGC+I+++ E+    + + 
Sbjct: 66  NQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASES----SGIP 121

Query: 886 DELCQINGELDSVRKGLNAVAQVL 957
           +  C + G  +S+ +    + Q++
Sbjct: 122 ERPCVLTGTPESIEQAKRLLGQIV 145



 Score = 35.8 bits (81), Expect = 0.97
 Identities = 61/290 (21%), Positives = 111/290 (38%), Gaps = 41/290 (14%)
 Frame = +1

Query: 1498 LSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDSEA 1677
            +  +++  ++VG ++G+GG  + ++++ +   ++++    +P G     + ++ITGD+  
Sbjct: 164  IQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGAD---KPLRITGDAFK 220

Query: 1678 IQEALMQITARLRNNLFRDRMASMGPSMQPPFG----LLDPQF--GAFPGIHESTSPRIY 1839
            +Q+A   +   +R     D     G       G    +  P+F  G   G +     +I 
Sbjct: 221  VQQAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQ 280

Query: 1840 PNAS---QFHKD---FMGRPLDEMSAPWTTKGMQDVGDPMSIS-----GVPGM-AHRGIG 1983
             +A    QF  D      R    M  P   +    +   + ++     G  G+ A RG G
Sbjct: 281  NDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERDGFGGLAAARGRG 340

Query: 1984 GFSGPVHSSRPIITGNIMVPRLIIPA-----LCGHDGGCLNMIREFSGAKITIDE---PL 2139
               G      P   G +      +PA     + G  G  +  I + SGA + +     P 
Sbjct: 341  RGRGDWSVGAP---GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPN 397

Query: 2140 ADSMDTPVMISGTPDQMHAARSLVQAFV---------------LSEPPAP 2244
            +D       I G P Q+  AR L+   V                S+PPAP
Sbjct: 398  SDPNLRRFTIRGVPQQIEVARQLIDEKVGGTNLGAPGAFGQSPFSQPPAP 447



 Score = 33.5 bits (75), Expect = 4.8
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
 Frame = +1

Query: 247 GVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDE---RVIVITTVEK 417
           GV  I    P ++CG VIGK G  I  I +++G  + +    P   +   R   I  V +
Sbjct: 353 GVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQ 412

Query: 418 DKEASHEQGKQNDDGTAVSGDG 483
             E + +   +   GT +   G
Sbjct: 413 QIEVARQLIDEKVGGTNLGAPG 434

---

>Q9UNW9:NOVA2_HUMAN RNA-binding protein Nova-2 - Homo sapiens (Human)|
          Length = 492

 Score = 40.8 bits (94), Expect = 0.030
 Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
 Frame = +1

Query: 1327 DTGCEIKIVET---VPKSDDHIIIISGPAHPGDGI-SPAQNAILHVQRKITP-------- 1470
            +TG  IK+ ++    P + + + ++ G A   + + S     +  + + +T         
Sbjct: 61   ETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQ 120

Query: 1471 --TTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIA 1644
              TT N +    ++LIV  +  G ++GKGG+ +  + + S A + +  K   P G+    
Sbjct: 121  PQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQE 177

Query: 1645 EVVQITGDSEAIQEALMQITARLRNN 1722
             VV ++G+ E + +A+  I  +++ +
Sbjct: 178  RVVTVSGEPEQVHKAVSAIVQKVQED 203



 Score = 40.4 bits (93), Expect = 0.040
 Identities = 26/72 (36%), Positives = 37/72 (51%)
 Frame = +1

Query: 1498 LSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDSEA 1677
            L  + V  N VG +LGKGG  + E ++L+ A I +  K +   G +N    V ITG   A
Sbjct: 408  LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRN--RRVTITGSPAA 465

Query: 1678 IQEALMQITARL 1713
             Q A   I+ R+
Sbjct: 466  TQAAQYLISQRV 477



 Score = 34.7 bits (78), Expect = 2.2
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = +1

Query: 223 QPQMTIQPG-VPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCD--ERV 393
           QPQ T+ P      +++ P    G +IGK G+ +  + +++G  +++ +   G +  ERV
Sbjct: 120 QPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 179

Query: 394 IVITTVEKDKEASHE 438
           +   TV  + E  H+
Sbjct: 180 V---TVSGEPEQVHK 191

---

>O42254:IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 - Gallus gallus|
            (Chicken)
          Length = 576

 Score = 40.4 bits (93), Expect = 0.040
 Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 1/190 (0%)
 Frame = +1

Query: 1135 NVAPFSAFPDQRSNIPPFSSFPDALMHGNASVPPEPLTFRLLCSSDXXXXXXXXXXXXXX 1314
            N+A    FP   + +PP  S        ++ +PPE  T  +   +               
Sbjct: 369  NLAAVGLFPASSNAVPPPPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAIIGKKGQHIK 428

Query: 1315 XXXXDTGCEIKIVET-VPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKEG 1491
                     IKI     P S   +++I+GP    +    AQ  I    ++       +E 
Sbjct: 429  QLSRFASASIKIAPPETPDSKVRMVVITGPP---EAQFKAQGRIYGKLKEENFFGPKEEV 485

Query: 1492 PALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDS 1671
               + + V  +  G ++GKGG  + E++ L+ A ++V  +D+ P   +N   +V+I G  
Sbjct: 486  KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV-PRDQTPD--ENEQVIVKIIGHF 542

Query: 1672 EAIQEALMQI 1701
             A Q A  +I
Sbjct: 543  YASQMAQRKI 552



 Score = 34.3 bits (77), Expect = 2.8
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
 Frame = +1

Query: 157 QKNSSEHNGRAKWQKTKHAPSQQPQMTI------QPGVPLIRILCPTERCGNVIGKAGSI 318
           Q      NGR      + AP Q   +T       QP    +R+L PT+  G +IGK G+ 
Sbjct: 158 QSVQGPENGRRGGFGARGAPRQGSPVTAGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGAT 217

Query: 319 IAKIRKENGVKIRV 360
           I  I K+   KI V
Sbjct: 218 IRNITKQTQSKIDV 231

---

>Q5SF07:IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 - Mus musculus|
            (Mouse)
          Length = 592

 Score = 39.7 bits (91), Expect = 0.067
 Identities = 69/328 (21%), Positives = 127/328 (38%), Gaps = 8/328 (2%)
 Frame = +1

Query: 742  VSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCALLKDELCQINGELDS 921
            V  ++L  +  VG L+G  G  +K++  ++G +I +S     L     +    + G +++
Sbjct: 268  VPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQ-DLSIYNPERTITVRGTIEA 326

Query: 922  -------VRKGLNAVAQVLFTHPPRESDVVPIVHPSGSSSHTFDRSDGLPPGMPPNLHLP 1080
                   + K L    +       ++++++P ++ S     +   S  LPP         
Sbjct: 327  CANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSV-LPP--------- 376

Query: 1081 FQGPSHARGPFDIIDERPNVAPFSAFPDQRSNIPPFSSFPDALMHGNASVPPEPLTFRLL 1260
               P+  RG    +   P   PF+      S++ P   F     H +    PE  T  L 
Sbjct: 377  ---PAGPRG----VPPSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSY---PEQETVSLF 426

Query: 1261 CSSDXXXXXXXXXXXXXXXXXXDTGCEIKIVETV-PKSDDHIIIISGPAHPGDGISPAQN 1437
              +                     G  IKI     P   + ++II+GP    +    AQ 
Sbjct: 427  IPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP---EAQFKAQG 483

Query: 1438 AILHVQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDK 1617
             I    ++       +E    + + V  +  G ++GKGG  + E++ L+ A +IV  +D+
Sbjct: 484  RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV-PRDQ 542

Query: 1618 IPRGVQNIAEVVQITGDSEAIQEALMQI 1701
             P   +N   +V+I G   A Q A  +I
Sbjct: 543  TPD--ENEEVIVRIIGHFFASQTAQRKI 568



 Score = 33.9 bits (76), Expect = 3.7
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 244 PGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAV-PGCDERVIVIT 405
           P    + +  PT+  G +IGK G+ I ++ +  G  I++  A  P   ER+++IT
Sbjct: 418 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIIT 472

---

>O57526:IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B - Xenopus|
            laevis (African clawed frog)
          Length = 593

 Score = 39.3 bits (90), Expect = 0.088
 Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 8/219 (3%)
 Frame = +1

Query: 1135 NVAPFSAFPDQRSNIPPFSSFPDALMHGNASVP----PEPLTFRLLCSSDXXXXXXXXXX 1302
            N+     FP   S +PP S+   +     +  P    PE  T  L   +           
Sbjct: 378  NLNALGLFPPSSSGMPPPSAGVSSPTTSASYPPFGQQPESETVHLFIPALAVGAIIGKQG 437

Query: 1303 XXXXXXXXDTGCEIKIVETV-PKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTS 1479
                      G  IKI     P +   ++II+GP    +    AQ  I    ++      
Sbjct: 438  QHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPP---EAQFKAQGRIYGKLKEENFFGP 494

Query: 1480 NKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQI 1659
             +E    + + V     G ++GKGG  + E++ L+ A ++V  +D+ P   +N   VV+I
Sbjct: 495  KEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV-PRDQTPD--ENDQVVVKI 551

Query: 1660 TGD---SEAIQEALMQITARLRNNLFRDRMASMGPSMQP 1767
            TG    S+  Q  + +I A++R    + +  +     QP
Sbjct: 552  TGHFYASQLAQRKIQEILAQVRRQQQQQQKTAQSGQPQP 590



 Score = 32.7 bits (73), Expect = 8.2
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
 Frame = +1

Query: 118 DMASHAYSSKRPFQKNSSEHNGRAKWQKTKHAPSQQPQMTIQPG----VPLIRILCPTER 285
           +MA+    S++  Q       GR  + +   A    P    +P     VPL R+L PT+ 
Sbjct: 157 EMATPQSPSQQLQQPQQQHPQGRRGFGQRGPARQGSPGAAARPKPQSEVPL-RMLVPTQF 215

Query: 286 CGNVIGKAGSIIAKIRKENGVKIRV 360
            G +IGK G+ I  I K+   KI +
Sbjct: 216 VGAIIGKEGATIRNITKQTQSKIDI 240

---

>Q05A36:MEX3C_MOUSE RNA-binding protein MEX3C - Mus musculus (Mouse)|
          Length = 652

 Score = 38.9 bits (89), Expect = 0.12
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
 Frame = +1

Query: 1333 GCEIKI--------VETVPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITP--TTSN 1482
            GC+IK         ++T  + ++ I +++G     + ++ A+  IL      +    + N
Sbjct: 245  GCKIKALRAKTNTYIKTPVRGEEPIFVVTGRK---EDVAMAKREILSAAEHFSMIRASRN 301

Query: 1483 KEGPALSRLIVSPN--------------QVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKI 1620
            K GPAL  L  SPN               VG ++G  G+ +  +++ +  +I+  S+DK 
Sbjct: 302  KNGPALGGLSCSPNLPGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKE 361

Query: 1621 PRGVQNIAEVVQITGDSEAIQEALMQI 1701
            P        V ++TG  E +  A  +I
Sbjct: 362  P--------VFEVTGMPENVDRAREEI 380

---

>Q5U5Q3:MEX3C_HUMAN RNA-binding protein MEX3C - Homo sapiens (Human)|
          Length = 659

 Score = 38.9 bits (89), Expect = 0.12
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
 Frame = +1

Query: 1333 GCEIKI--------VETVPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITP--TTSN 1482
            GC+IK         ++T  + ++ I +++G     + ++ A+  IL      +    + N
Sbjct: 252  GCKIKALRAKTNTYIKTPVRGEEPIFVVTGRK---EDVAMAKREILSAAEHFSMIRASRN 308

Query: 1483 KEGPALSRLIVSPN--------------QVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKI 1620
            K GPAL  L  SPN               VG ++G  G+ +  +++ +  +I+  S+DK 
Sbjct: 309  KNGPALGGLSCSPNLPGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKE 368

Query: 1621 PRGVQNIAEVVQITGDSEAIQEALMQI 1701
            P        V ++TG  E +  A  +I
Sbjct: 369  P--------VFEVTGMPENVDRAREEI 387

---

>Q9CPN8:IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 - Mus musculus|
            (Mouse)
          Length = 579

 Score = 38.9 bits (89), Expect = 0.12
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1333 GCEIKIVET-VPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKEGPALSRL 1509
            G  IKI     P +   ++II+GP    +    AQ  I    ++    +  +E    + +
Sbjct: 436  GASIKIAPAEAPDAKVRMVIITGPP---EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492

Query: 1510 IVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEA 1689
             V     G ++GKGG  + E++ LS A ++V  +D+ P   +N   VV+ITG   A Q A
Sbjct: 493  RVPSFAAGRVIGKGGKTVNELQSLSSAEVVV-PRDQTPD--ENDQVVVKITGHFYACQVA 549

Query: 1690 LMQI 1701
              +I
Sbjct: 550  QRKI 553



 Score = 33.1 bits (74), Expect = 6.3
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV--DEAVPGCDERVIVITTVE 414
           +R+L PT+  G +IGK G+ I  I K+   KI V   E     ++ + +++T E
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPE 251

---

>O00425:IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 - Homo sapiens|
            (Human)
          Length = 579

 Score = 38.9 bits (89), Expect = 0.12
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1333 GCEIKIVET-VPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKEGPALSRL 1509
            G  IKI     P +   ++II+GP    +    AQ  I    ++    +  +E    + +
Sbjct: 436  GASIKIAPAEAPDAKVRMVIITGPP---EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492

Query: 1510 IVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEA 1689
             V     G ++GKGG  + E++ LS A ++V  +D+ P   +N   VV+ITG   A Q A
Sbjct: 493  RVPSFAAGRVIGKGGKTVNELQNLSSAEVVV-PRDQTPD--ENDQVVVKITGHFYACQVA 549

Query: 1690 LMQI 1701
              +I
Sbjct: 550  QRKI 553



 Score = 33.1 bits (74), Expect = 6.3
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV--DEAVPGCDERVIVITTVE 414
           +R+L PT+  G +IGK G+ I  I K+   KI V   E     ++ + +++T E
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPE 251

---

>Q9H3S7:PTN23_HUMAN Tyrosine-protein phosphatase non-receptor type 23 - Homo sapiens|
            (Human)
          Length = 1636

 Score = 38.5 bits (88), Expect = 0.15
 Identities = 35/112 (31%), Positives = 44/112 (39%), Gaps = 12/112 (10%)
 Frame = +1

Query: 958  FTHPPRESDVVPIVHPSGS-----SSHTFDRSDGLPPGMP-------PNLHLPFQGPSHA 1101
            F  PP +    P  +P+G+     + H F  S G+P G P       P  H P   PS A
Sbjct: 910  FPVPPPQPLPTPYTYPAGAKQPIPAQHHF--SSGIPAGFPAPRIGPQPQPH-PQPHPSQA 966

Query: 1102 RGPFDIIDERPNVAPFSAFPDQRSNIPPFSSFPDALMHGNASVPPEPLTFRL 1257
             GP       P   P    P     +PP S +P A   G    PP PL  +L
Sbjct: 967  FGPQPPQQPLPLQHPHLFPPQAPGLLPPQSPYPYAPQPGVLGQPPPPLHTQL 1018

---

>Q8CGX0:IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 - Rattus|
            norvegicus (Rat)
          Length = 577

 Score = 38.5 bits (88), Expect = 0.15
 Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 2/191 (1%)
 Frame = +1

Query: 1135 NVAPFSAFPDQRSNIPPF-SSFPDALMHGNASVPPEPLTFRLLCSSDXXXXXXXXXXXXX 1311
            N+A    FP   S +PP  SS   A  +G+    PE    ++   +              
Sbjct: 369  NLAAVGLFPASSSAVPPPPSSVTGAAPYGSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHI 428

Query: 1312 XXXXXDTGCEIKIVET-VPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKE 1488
                      IKI     P S   +++I+GP    +    AQ  I    ++       +E
Sbjct: 429  KQLSRFASASIKIAPPETPDSKVRMVVITGPP---EAQFKAQGRIYGKLKEENFFGPKEE 485

Query: 1489 GPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGD 1668
                + + V  +  G ++GKGG  + E++ L+ A ++V  +D+ P   +N   +V+I G 
Sbjct: 486  VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV-PRDQTPD--ENDQVIVKIIGH 542

Query: 1669 SEAIQEALMQI 1701
              A Q A  +I
Sbjct: 543  FYASQMAQRKI 553



 Score = 35.0 bits (79), Expect = 1.7
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +1

Query: 211 APSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV 360
           AP++Q Q+ I      +R+L PT+  G +IGK G+ I  I K+   KI V
Sbjct: 187 APAKQQQVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV 231

---

>O73932:IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A - Xenopus|
            laevis (African clawed frog)
          Length = 594

 Score = 38.5 bits (88), Expect = 0.15
 Identities = 72/346 (20%), Positives = 129/346 (37%), Gaps = 4/346 (1%)
 Frame = +1

Query: 742  VSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCALLKDELCQINGELDS 921
            +  ++L  ++ VG L+G  G  +K++  D+  +I +S     L     +    + G ++ 
Sbjct: 287  IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQ-DLTLYNPERTITVKGSIEP 345

Query: 922  VRKGLNAVAQVLFTHPPRESDVVPIVHPSGSSSHTFDRSDGLPPGMPPNLHLPFQGPSHA 1101
              K    + + +      E+D+  +       +H       L PG+  N    F   S  
Sbjct: 346  CAKAEEEIMKKI--RESYENDIAAM----NLQAH-------LIPGLNLNALGLFPSSSSG 392

Query: 1102 RGPFDIIDERPNVAPFSAFPDQRSNIPPFSSFPDALMHGNASVPPEPLTFRLLCSSDXXX 1281
              P       P+V   S  P   ++ PPF               PE  T  L   +    
Sbjct: 393  MPP-------PSVGVPS--PTSSTSYPPFGQ------------QPESETVHLFIPALAVG 431

Query: 1282 XXXXXXXXXXXXXXXDTGCEIKIVETV-PKSDDHIIIISGPAHPGDGISPAQNAILHVQR 1458
                             G  IKI     P +   ++II+GP    +    AQ  I    +
Sbjct: 432  AIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPP---EAQFKAQGRIYGKLK 488

Query: 1459 KITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQN 1638
            +       +E    + + V     G ++GKGG  + E++ L+ A ++V  +D+ P   +N
Sbjct: 489  EENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV-PRDQTPD--EN 545

Query: 1639 IAEVVQITGD---SEAIQEALMQITARLRNNLFRDRMASMGPSMQP 1767
               VV+ITG    S+  Q  + +I A++R    + +        QP
Sbjct: 546  DEVVVKITGHFYASQLAQRKIQEILAQVRRQQQQQQKTVQSGQPQP 591



 Score = 32.7 bits (73), Expect = 8.2
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
 Frame = +1

Query: 118 DMASHAYSSKRPFQKNSSEH-NGRAKWQKTKHAPSQQPQMTIQPG----VPLIRILCPTE 282
           +MA+    S++  Q+   +H  GR  + +   A    P    +P     VPL R+L PT+
Sbjct: 157 EMATPQAPSQQLQQQPQQQHPQGRRGFGQRGPARQGSPGAAARPKPQTEVPL-RMLVPTQ 215

Query: 283 RCGNVIGKAGSIIAKIRKENGVKIRV 360
             G +IGK G+ I  I K+   KI +
Sbjct: 216 FVGAIIGKEGATIRNITKQTQSKIDI 241

---

>Q5ZLP8:IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 - Gallus gallus|
            (Chicken)
          Length = 584

 Score = 38.1 bits (87), Expect = 0.20
 Identities = 51/214 (23%), Positives = 83/214 (38%), Gaps = 8/214 (3%)
 Frame = +1

Query: 1135 NVAPFSAFPDQRSNIPP----FSSFPDALMHGNASVPPEPLTFRLLCSSDXXXXXXXXXX 1302
            N+     FP   S IPP     +S   A  +      PE  T  L   +           
Sbjct: 370  NLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGQQPESETVHLFIPALAVGAIIGKQG 429

Query: 1303 XXXXXXXXDTGCEIKIVETV-PKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTS 1479
                      G  IKI     P +   ++II+GP    +    AQ  I    ++      
Sbjct: 430  QHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPP---EAQFKAQGRIYGKLKEENFFGP 486

Query: 1480 NKEGPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQI 1659
             +E    + + V     G ++GKGG  + E++ L+ A ++V  +D+ P   +N   VV+I
Sbjct: 487  KEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV-PRDQTPD--ENDQVVVKI 543

Query: 1660 TGDSEAIQEA---LMQITARLRNNLFRDRMASMG 1752
            TG   A Q A   + +I A++R    + +    G
Sbjct: 544  TGHFYACQLAQRKIQEILAQVRRQQQQQKTLQSG 577



 Score = 34.3 bits (77), Expect = 2.8
 Identities = 20/50 (40%), Positives = 28/50 (56%)
 Frame = +1

Query: 211 APSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV 360
           +PS   +   Q  VPL R+L PT+  G +IGK G+ I  I K+   KI +
Sbjct: 184 SPSATTRQKPQSDVPL-RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI 232

---

>Q6P1Z5:F113A_MOUSE Protein FAM113A - Mus musculus (Mouse)|
          Length = 449

 Score = 37.4 bits (85), Expect = 0.33
 Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
 Frame = +1

Query: 1726 FRDRMASMGPSMQPPFGLLDPQFGAFPGIHESTSPRIYPNASQFHKDFMGRP-------- 1881
            FR+++A     + PPF L  P   +FP   ES+ P ++P+  Q    F G+P        
Sbjct: 304  FREKLAL---PLLPPFHLPPPM--SFPYPLESSPPPLFPSLPQDTPFFQGQPFPPYEFKY 358

Query: 1882 --LDEMSAPWTTKGMQDVGDPMSISGVPGMAHRGIGGFSGP-VHSSRP--IITGNIMVPR 2046
              +++ S P    GM  V  P+  S    ++H   G   GP VH  +P  ++     VPR
Sbjct: 359  NAMEDFSMPGCGPGMNFVPGPLPPSVSGPVSH---GQHRGPVVHRGKPRCVLNNPYHVPR 415

Query: 2047 LIIPALCGH 2073
            +  P  C H
Sbjct: 416  IGGP--CRH 422

---

>Q80VL1:TDRKH_MOUSE Tudor and KH domain-containing protein - Mus musculus (Mouse)|
          Length = 560

 Score = 36.6 bits (83), Expect = 0.57
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
 Frame = +1

Query: 1921 QDVGDP--MSISGVPGMAHRGIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGGCLNM 2094
            +DVGD   + ISG P    +        +  + P+    + VP+  +  + G  G  +  
Sbjct: 91   EDVGDERVLLISGFPVQVCKAKAAIHQILTENTPVFE-QLSVPQRSVGRIIGRGGETIRS 149

Query: 2095 IREFSGAKITIDEPLADS--MDTPVMISGTPDQMHAARSLV 2211
            I + SGAKIT D+    +  +   + ISGT  ++ AA+ L+
Sbjct: 150  ICKASGAKITCDKESEGTLLLSRLIKISGTQKEVAAAKHLI 190



 Score = 35.4 bits (80), Expect = 1.3
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT----TVEKDKE 426
           I +  P E    +IG+ G+ I ++RK+ G +I VD    G DERV++I+     V K K 
Sbjct: 55  IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVG-DERVLLISGFPVQVCKAKA 113

Query: 427 ASHE 438
           A H+
Sbjct: 114 AIHQ 117

---

>Q9Y2W6:TDRKH_HUMAN Tudor and KH domain-containing protein - Homo sapiens (Human)|
          Length = 606

 Score = 36.6 bits (83), Expect = 0.57
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
 Frame = +1

Query: 1921 QDVGDP--MSISGVPGMAHRGIGGFSGPVHSSRPIITGNIMVPRLIIPALCGHDGGCLNM 2094
            +DVGD   + ISG P    +        +  + P+ +  + VP+  +  + G  G  +  
Sbjct: 91   EDVGDERVLLISGFPVQVCKAKAAIHQILTENTPV-SEQLSVPQRSVGRIIGRGGETIRS 149

Query: 2095 IREFSGAKITIDEPLADS--MDTPVMISGTPDQMHAARSLV 2211
            I + SGAKIT D+    +  +   + ISGT  ++ AA+ L+
Sbjct: 150  ICKASGAKITCDKESEGTLLLSRLIKISGTQKEVAAAKHLI 190



 Score = 35.4 bits (80), Expect = 1.3
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +1

Query: 259 IRILCPTERCGNVIGKAGSIIAKIRKENGVKIRVDEAVPGCDERVIVIT----TVEKDKE 426
           I +  P E    +IG+ G+ I ++RK+ G +I VD    G DERV++I+     V K K 
Sbjct: 55  IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVG-DERVLLISGFPVQVCKAKA 113

Query: 427 ASHE 438
           A H+
Sbjct: 114 AIHQ 117

---

>Q5RB68:IF2B2_PONPY Insulin-like growth factor 2 mRNA-binding protein 2 - Pongo pygmaeus|
            (Orangutan)
          Length = 556

 Score = 36.6 bits (83), Expect = 0.57
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1333 GCEIKIVETV-PKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKEGPALSRL 1509
            G  IKI     P   + ++II+GP    +    AQ  I    ++       +E    + +
Sbjct: 415  GASIKIAPAEGPDVSERMVIITGPP---EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHI 471

Query: 1510 IVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEA 1689
             V  +  G ++GKGG  + E++ L+ A +IV  +D+ P   +N   +V+I G   A Q A
Sbjct: 472  RVPSSTAGRVIGKGGKTVNELQNLTSAEVIV-PRDQTPD--ENEEVIVRIIGHFFASQTA 528

Query: 1690 LMQI 1701
              +I
Sbjct: 529  QRKI 532



 Score = 35.8 bits (81), Expect = 0.97
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +1

Query: 175 HNGRAKWQKTKHAPSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKI 354
           H+G        H     P     P   ++ +  PT+  G +IGK G+ I ++ +  G  I
Sbjct: 359 HSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASI 418

Query: 355 RVDEAV-PGCDERVIVIT 405
           ++  A  P   ER+++IT
Sbjct: 419 KIAPAEGPDVSERMVIIT 436



 Score = 33.5 bits (75), Expect = 4.8
 Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
 Frame = +1

Query: 106 KAGYDMASHAYSSKRPFQKNSSEHNGRAKWQKTKHAPSQQPQMTIQPGVPLIRILCPTER 285
           K  Y       S   P +    +H+ R +     HAP    Q   Q   PL RIL PT+ 
Sbjct: 151 KISYIPDEEVSSPSPPQRAQRGDHSSREQG----HAPGGTSQAR-QIDFPL-RILVPTQF 204

Query: 286 CGNVIGKAGSIIAKIRK--ENGVKIRVDEAVPGCDERVIVITTVEKDKEA 429
            G +IGK G  I  I K  ++ V I   E     ++ V +  T E   EA
Sbjct: 205 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA 254

---

>Q9Y6M1:IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 - Homo sapiens|
            (Human)
          Length = 556

 Score = 36.6 bits (83), Expect = 0.57
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1333 GCEIKIVETV-PKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKEGPALSRL 1509
            G  IKI     P   + ++II+GP    +    AQ  I    ++       +E    + +
Sbjct: 415  GASIKIAPAEGPDVSERMVIITGPP---EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHI 471

Query: 1510 IVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEA 1689
             V  +  G ++GKGG  + E++ L+ A +IV  +D+ P   +N   +V+I G   A Q A
Sbjct: 472  RVPSSTAGRVIGKGGKTVNELQNLTSAEVIV-PRDQTPD--ENEEVIVRIIGHFFASQTA 528

Query: 1690 LMQI 1701
              +I
Sbjct: 529  QRKI 532



 Score = 35.8 bits (81), Expect = 0.97
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +1

Query: 175 HNGRAKWQKTKHAPSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKI 354
           H+G        H     P     P   ++ +  PT+  G +IGK G+ I ++ +  G  I
Sbjct: 359 HSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASI 418

Query: 355 RVDEAV-PGCDERVIVIT 405
           ++  A  P   ER+++IT
Sbjct: 419 KIAPAEGPDVSERMVIIT 436



 Score = 33.5 bits (75), Expect = 4.8
 Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
 Frame = +1

Query: 106 KAGYDMASHAYSSKRPFQKNSSEHNGRAKWQKTKHAPSQQPQMTIQPGVPLIRILCPTER 285
           K  Y       S   P +    +H+ R +     HAP    Q   Q   PL RIL PT+ 
Sbjct: 151 KISYIPDEEVSSPSPPQRAQRGDHSSREQG----HAPGGTSQAR-QIDFPL-RILVPTQF 204

Query: 286 CGNVIGKAGSIIAKIRK--ENGVKIRVDEAVPGCDERVIVITTVEKDKEA 429
            G +IGK G  I  I K  ++ V I   E     ++ V +  T E   EA
Sbjct: 205 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA 254

---

>Q9NZI8:IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 - Homo sapiens|
            (Human)
          Length = 577

 Score = 36.6 bits (83), Expect = 0.57
 Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 2/191 (1%)
 Frame = +1

Query: 1135 NVAPFSAFPDQRSNIPPF-SSFPDALMHGNASVPPEPLTFRLLCSSDXXXXXXXXXXXXX 1311
            N+A    FP   S +PP  SS   A  + +    PE    ++   +              
Sbjct: 369  NLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHI 428

Query: 1312 XXXXXDTGCEIKIVET-VPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKE 1488
                      IKI     P S   ++II+GP    +    AQ  I    ++       +E
Sbjct: 429  KQLSRFASASIKIAPPETPDSKVRMVIITGPP---EAQFKAQGRIYGKLKEENFFGPKEE 485

Query: 1489 GPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGD 1668
                + + V  +  G ++GKGG  + E++ L+ A ++V  +D+ P   +N   +V+I G 
Sbjct: 486  VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV-PRDQTPD--ENDQVIVKIIGH 542

Query: 1669 SEAIQEALMQI 1701
              A Q A  +I
Sbjct: 543  FYASQMAQRKI 553



 Score = 35.0 bits (79), Expect = 1.7
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +1

Query: 211 APSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV 360
           AP++Q Q+ I      +R+L PT+  G +IGK G+ I  I K+   KI V
Sbjct: 187 APAKQQQVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV 231

---

>O88477:IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 - Mus musculus|
            (Mouse)
          Length = 577

 Score = 36.2 bits (82), Expect = 0.75
 Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 2/191 (1%)
 Frame = +1

Query: 1135 NVAPFSAFPDQRSNIPPF-SSFPDALMHGNASVPPEPLTFRLLCSSDXXXXXXXXXXXXX 1311
            N+A    FP   S +PP  SS   A  + +    PE    ++   +              
Sbjct: 369  NLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHI 428

Query: 1312 XXXXXDTGCEIKIVET-VPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKE 1488
                      IKI     P S   +++I+GP    +    AQ  I    ++       +E
Sbjct: 429  KQLSRFASASIKIAPPETPDSKVRMVVITGPP---EAQFKAQGRIYGKLKEENFFGPKEE 485

Query: 1489 GPALSRLIVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGD 1668
                + + V  +  G ++GKGG  + E++ L+ A ++V  +D+ P   +N   +V+I G 
Sbjct: 486  VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV-PRDQTPD--ENDQVIVKIIGH 542

Query: 1669 SEAIQEALMQI 1701
              A Q A  +I
Sbjct: 543  FYASQMAQRKI 553



 Score = 32.7 bits (73), Expect = 8.2
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = +1

Query: 211 APSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV 360
           AP++Q  + I      +R+L PT+  G +IGK G+ I  I K+   KI V
Sbjct: 187 APAKQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV 231

---

>Q9PW80:IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 - Danio rerio|
           (Zebrafish) (Brachydanio rerio)
          Length = 582

 Score = 35.0 bits (79), Expect = 1.7
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +1

Query: 211 APSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSIIAKIRKENGVKIRV 360
           +PS   +  +Q  VPL R+L PT+  G +IGK G+ I  I K+   KI +
Sbjct: 182 SPSLGARPKLQSDVPL-RLLVPTQFVGAIIGKEGATIRNITKQTHSKIDI 230



 Score = 34.7 bits (78), Expect = 2.2
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
 Frame = +1

Query: 1381 IIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKEGPALSRLIVSPNQVGCLLGKGGSI 1560
            ++IISGP    +    AQ  I    ++       +E    + + V     G ++GKGG  
Sbjct: 456  MVIISGPP---EAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKT 512

Query: 1561 MAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGD---SEAIQEALMQITARLR 1716
            + E++ L+ A ++V  +D+ P   +N   VV+ITG    S+  Q  + +I +++R
Sbjct: 513  VNELQNLTSAEVVV-PRDQTPD--ENDQVVVKITGHFYASQLAQRKIQEIISQVR 564

---

>Q8MJ06:RP1_PAPHA Oxygen-regulated protein 1 - Papio hamadryas (Hamadryas baboon)|
          Length = 2152

 Score = 34.7 bits (78), Expect = 2.2
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
 Frame = +1

Query: 691  ITESKNGTGDAPGQKTPVSFRLLVLDSQVGPL------LGIRGSVIKQMSADSGCEIRVS 852
            I++++NG    PG    V F   + +S    L      L ++GS+      D+   I  S
Sbjct: 1095 ISKTQNGVVQMPGSLANVPFHSAICNSSTNLLLAWLLVLNLKGSMNSFCQVDAHKTINKS 1154

Query: 853  KENLPLCALLKDELCQINGELDSVRKGLNAVAQVLFTH---PPRESDVVPI 996
             E L L  +LK     I  E D ++  +  + +   +H     +E DVVP+
Sbjct: 1155 SETLALLEILKH--IAITEEADDLKAAVANLVESTTSHFGLSEKEQDVVPL 1203

---

>Q09717:RANG_SCHPO Ran-specific GTPase-activating protein 1 - Schizosaccharomyces|
           pombe (Fission yeast)
          Length = 215

 Score = 34.7 bits (78), Expect = 2.2
 Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 3/110 (2%)
 Frame = +1

Query: 403 TTVEKDKEASHEQ---GKQNDDGTAVSGDGXXXXXXXXXXXXXXXXXNAHGKEEQDDAER 573
           TT E+ K +   +    KQ ++  AV GDG                  A G E+ + A  
Sbjct: 12  TTKEEQKSSFASEDVASKQTEEAKAVFGDGVAKQENKSGASTNDEKKPAEGDEDAEPASP 71

Query: 574 GDSKEENDDSSVAKTTKLEPERVIPSAMNAILHVFDRIFITESKNGTGDA 723
               E     S  +T   E E  +   M A L  FD+      + GTGDA
Sbjct: 72  EVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAASEWKERGTGDA 121

---

>Q7U8Q6:FABZ_SYNPX (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase -|
            Synechococcus sp. (strain WH8102)
          Length = 156

 Score = 34.7 bits (78), Expect = 2.2
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
 Frame = +1

Query: 1768 PFGLLDPQFGAFPGIHESTSPRIYPNASQFHKDFMGRPLDEMSAPWTTKGMQDVGDPMSI 1947
            PF L+D      PG+  +    +  N  QF   F GRPL  M      + M  VG  + +
Sbjct: 30   PFALVDRVIAHEPGVSATGIKNVTVNEPQFQGHFPGRPL--MPGVLIVEAMAQVGG-LIV 86

Query: 1948 SGVPGMAHRGIGGFSG--PVHSSRPIITGNIMV 2040
            + +P +  +G+  F+G   V   RP++ G+ +V
Sbjct: 87   TQMPDLP-KGLFVFAGIDGVRFRRPVVPGDQLV 118

---

>Q8UVD9:ZBP2_CHICK Zipcode-binding protein 2 - Gallus gallus (Chicken)|
          Length = 769

 Score = 34.3 bits (77), Expect = 2.8
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 724 PGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCALLKDELCQI 903
           P + T V+    V D  VG ++G  G  I ++  DSGC++++S    P    L +    +
Sbjct: 203 PPRSTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQIS----PDSGGLPERSVSL 258

Query: 904 NGELDSVRK 930
            G  ++V+K
Sbjct: 259 TGSPEAVQK 267

---

>P81021:VIGLN_CHICK Vigilin - Gallus gallus (Chicken)|
          Length = 1270

 Score = 33.9 bits (76), Expect = 3.7
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +1

Query: 1537 LLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLR 1716
            L+GKGG  + ++R  + A II       P       E++ I G  EA++EA  ++ A ++
Sbjct: 742  LIGKGGGNIRKVRDNTGARII------FPTSEDKDQELITIMGTEEAVKEAQKELEALIK 795

Query: 1717 N--NLFRDRM 1740
            N  N+  D M
Sbjct: 796  NLDNVVEDSM 805

---

>A1WHD1:RS3_VEREI 30S ribosomal protein S3 - Verminephrobacter eiseniae (strain|
           EF01-2)
          Length = 294

 Score = 33.9 bits (76), Expect = 3.7
 Identities = 26/83 (31%), Positives = 39/83 (46%)
 Frame = +1

Query: 124 ASHAYSSKRPFQKNSSEHNGRAKWQKTKHAPSQQPQMTIQPGVPLIRILCPTERCGNVIG 303
           AS  Y+  R F    +E     ++ KTK   +   ++ I+      RI   + R G VIG
Sbjct: 19  ASRWYADNRDFAGMLAEDIKVREYLKTKLKNAAVSRILIERPAKNARITIYSARPGVVIG 78

Query: 304 KAGSIIAKIRKENGVKIRVDEAV 372
           K G  I  ++KE  V++ V  AV
Sbjct: 79  KKGEDIESLKKELAVRLGVPVAV 101

---

>Q99PF5:FUBP2_RAT Far upstream element-binding protein 2 - Rattus norvegicus (Rat)|
          Length = 721

 Score = 33.9 bits (76), Expect = 3.7
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 724 PGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCALLKDELCQI 903
           P  +T ++    V D  VG ++G  G  I ++  DSGC++++S    P    L +    +
Sbjct: 140 PPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQIS----PDSGGLPERSVSL 195

Query: 904 NGELDSVRK 930
            G  +SV+K
Sbjct: 196 TGAPESVQK 204

---

>Q92945:FUBP2_HUMAN Far upstream element-binding protein 2 - Homo sapiens (Human)|
          Length = 707

 Score = 33.9 bits (76), Expect = 3.7
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 724 PGQKTPVSFRLLVLDSQVGPLLGIRGSVIKQMSADSGCEIRVSKENLPLCALLKDELCQI 903
           P  +T ++    V D  VG ++G  G  I ++  DSGC++++S    P    L +    +
Sbjct: 139 PPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQIS----PDSGGLPERSVSL 194

Query: 904 NGELDSVRK 930
            G  +SV+K
Sbjct: 195 TGAPESVQK 203

---

>Q3A9S2:RS3_CARHZ 30S ribosomal protein S3 - Carboxydothermus hydrogenoformans|
           (strain Z-2901 / DSM 6008)
          Length = 222

 Score = 33.5 bits (75), Expect = 4.8
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
 Frame = +1

Query: 136 YSSKRPFQKNSSEHNGRAKWQKTKHAPSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGS 315
           ++ K+ +Q+   E     K+ KTK   +   ++ I+     +++   T R G VIGK G+
Sbjct: 23  FADKKHYQELLHEDLKIRKYIKTKFYQAGISRIVIERASNRVKVTIHTARPGMVIGKGGT 82

Query: 316 IIAKIRKE----NGVKIRVDEA---VPGCDERVI 396
            I  +RKE     G +I ++ A   VP  D +++
Sbjct: 83  EIEVLRKELEKMTGKQININIAEIKVPEIDAQLV 116

---

>O76024:WFS1_HUMAN Wolframin - Homo sapiens (Human)|
          Length = 890

 Score = 33.1 bits (74), Expect = 6.3
 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = -2

Query: 464 VPSSFCLPCSWLASLS-FSTVVMTITLSSQPGTASSTRIFTPFSFLIFAMMLPALPMTFP 288
           + S  C+PCS LA ++ F TV   ++LS+     +   + T  +  + ++ LP++P+ +P
Sbjct: 421 IASKDCIPCSELAVITGFFTVTSYLSLSTHAEPYTRRALATEVTAGLLSL-LPSMPLNWP 479

Query: 287 HLSV 276
           +L V
Sbjct: 480 YLKV 483

---

>Q53218:Y4VJ_RHISN Uncharacterized protein y4vJ - Rhizobium sp. (strain NGR234)|
          Length = 351

 Score = 33.1 bits (74), Expect = 6.3
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +1

Query: 787 LGIRGSVIKQMSADSGCEIRVSKENLPLCALLKDELCQINGELDSVR 927
           LG+   +IK  +   G E+R SK +L  C    D+  +IN  +D+ R
Sbjct: 203 LGLLRGIIKTAAGSEGKEVRDSKVSLLRCCYASDDGAEINSYIDNAR 249

---

>Q6P0D5:WBP11_DANRE WW domain-binding protein 11 - Danio rerio (Zebrafish) (Brachydanio|
            rerio)
          Length = 640

 Score = 33.1 bits (74), Expect = 6.3
 Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
 Frame = +1

Query: 1048 PPGMPPNLHLPFQGPSHARGPFDIIDE--RPNV--APFSAFPDQRSNIPPFSSFPDALMH 1215
            PPGMPP    P  GP     P  +      PNV  AP S  P Q+S  P  SS   A   
Sbjct: 462  PPGMPPPPPPPRAGPPRMAPPLSLFPPPLNPNVLSAPPSIVPRQKS--PAASSNEGAPSG 519

Query: 1216 GNASVPPEPLT 1248
                +PP P T
Sbjct: 520  SALQMPPPPGT 530

---

>Q9Z1A6:VIGLN_RAT Vigilin - Rattus norvegicus (Rat)|
          Length = 1268

 Score = 33.1 bits (74), Expect = 6.3
 Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
 Frame = +1

Query: 1360 VPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKEGPALSRLIVSPNQVGCL 1539
            V  S    ++I GP+     +  A+  +LH+  +    +   +      +   P     L
Sbjct: 692  VEGSGSDTVVIRGPS---SDVEKAKKQLLHLAEEKQTKSFTVD------IRAKPEYHKFL 742

Query: 1540 LGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRN 1719
            +GKGG  + ++R  + A II       P       +++ I G  +A++EA  ++ A ++N
Sbjct: 743  IGKGGGKIRKVRDSTGARII------FPAAEDKDQDLITIIGKEDAVREAQKELEALIQN 796

Query: 1720 --NLFRDRM 1740
              N+  D M
Sbjct: 797  LDNVVEDYM 805

---

>Q8VDJ3:VIGLN_MOUSE Vigilin - Mus musculus (Mouse)|
          Length = 1268

 Score = 33.1 bits (74), Expect = 6.3
 Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
 Frame = +1

Query: 1360 VPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKEGPALSRLIVSPNQVGCL 1539
            V  S    ++I GP+     +  A+  +LH+  +    +   +      +   P     L
Sbjct: 692  VEGSGSDTVVIRGPS---SDVEKAKKQLLHLAEEKQTKSFTVD------IRAKPEYHKFL 742

Query: 1540 LGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEALMQITARLRN 1719
            +GKGG  + ++R  + A II       P       +++ I G  +A++EA  ++ A ++N
Sbjct: 743  IGKGGGKIRKVRDSTGARII------FPAAEDKDQDLITIIGKEDAVREAQKELEALIQN 796

Query: 1720 --NLFRDRM 1740
              N+  D M
Sbjct: 797  LENVVEDYM 805

---

>Q1WS96:RS3_LACS1 30S ribosomal protein S3 - Lactobacillus salivarius subsp.|
           salivarius (strain UCC118)
          Length = 218

 Score = 33.1 bits (74), Expect = 6.3
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = +1

Query: 142 SKRPFQKNSSEHNGRAKWQKTKHAPSQQPQMTIQPGVPLIRILCPTERCGNVIGKAGSII 321
           +++ F  N  E     K+ ++K A +    + I+     + I   T + G VIGK GS +
Sbjct: 24  AEKDFASNLHEDLRIRKYIESKLADASVSTVEIERAAKRVNISIHTAKPGMVIGKGGSEV 83

Query: 322 AKIRKE 339
            K+RKE
Sbjct: 84  EKLRKE 89

---

>P46342:PSTB1_BACSU Phosphate import ATP-binding protein pstB 1 - Bacillus subtilis|
          Length = 260

 Score = 33.1 bits (74), Expect = 6.3
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
 Frame = +1

Query: 874  ALLKDELCQINGE-----LDSVRKGLNAVAQVLFTHPPRESDVVPIVHPSGSSSHTFDRS 1038
            A++K E+ Q+NG           K +N            E++V  I+ PSG    TF ++
Sbjct: 7    AVMKQEVYQVNGMNLWYGQHHALKNINLSIY--------ENEVTAIIGPSGCGKSTFIKT 58

Query: 1039 DGLPPGMPPNL----HLPFQGPSHARGPFDIIDERPNV 1140
              L   M PN+     L + G +  +   DI+D R N+
Sbjct: 59   LNLMIQMTPNVKLAGELNYNGSNILKDKVDIVDLRKNI 96

---

>Q3AHS6:FABZ_SYNSC (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase -|
            Synechococcus sp. (strain CC9605)
          Length = 151

 Score = 33.1 bits (74), Expect = 6.3
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
 Frame = +1

Query: 1768 PFGLLDPQFGAFPGIHESTSPRIYPNASQFHKDFMGRPLDEMSAPWTTKGMQDVGDPMSI 1947
            PF L+D      PG+  +    +  N  QF   F  RPL  M      + M  VG  + +
Sbjct: 25   PFALVDRVIAHDPGVSATAIKNVTMNEPQFQGHFPERPL--MPGVLIVEAMAQVGG-LIV 81

Query: 1948 SGVPGMAHRGIGGFSG--PVHSSRPIITGNIMVPR 2046
            + +P +  +G+  F+G   V   RP++ G+ +V R
Sbjct: 82   TQMPDLP-KGLFVFAGIDGVRFRRPVVPGDQLVIR 115

---

>Q3AZF3:FABZ_SYNS9 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase -|
            Synechococcus sp. (strain CC9902)
          Length = 151

 Score = 33.1 bits (74), Expect = 6.3
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
 Frame = +1

Query: 1768 PFGLLDPQFGAFPGIHESTSPRIYPNASQFHKDFMGRPLDEMSAPWTTKGMQDVGDPMSI 1947
            PF L+D      PG+  +    I  N  QF   F  RPL  M      + M  VG  + +
Sbjct: 25   PFALVDRVIAYEPGVSATAIKNITMNEPQFQGHFPERPL--MPGVLIVEAMAQVGG-LIV 81

Query: 1948 SGVPGMAHRGIGGFSG--PVHSSRPIITGNIMV 2040
            + +P +  +G+  F+G   V   RP++ G+ ++
Sbjct: 82   AQIPDLP-KGLFVFAGIDGVRFRRPVVPGDQLI 113

---

>Q8TL01:TYPH_METAC Putative thymidine phosphorylase - Methanosarcina acetivorans|
          Length = 506

 Score = 32.7 bits (73), Expect = 8.2
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
 Frame = +1

Query: 1903 WTTKGMQDVGDPMSISGVPGMAHRGIGGFSGPVHSSR--PIITGN-IMVPRLIIPALCGH 2073
            W T+ M D GD +     P M    IGG  G   S    PI+  N +++P+    A+ G 
Sbjct: 140  WLTRAMIDTGDTIEFDTHPVMDKHSIGGVPGNKISLLVVPIVAANGLLIPKTSSRAITG- 198

Query: 2074 DGGCLNMIREFSGAKITIDE 2133
             GG  +++   S  + + +E
Sbjct: 199  AGGTADLMEVLSPVEFSSEE 218

---

>P08318:P100_HCMVA Large structural phosphoprotein - Human cytomegalovirus (strain|
            AD169) (HHV-5) (Human herpesvirus 5)
          Length = 1048

 Score = 32.7 bits (73), Expect = 8.2
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +1

Query: 1327 DTGCEIKIVETVPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKEGPALSR 1506
            DTG  + +  T P SD +  +IS P+   +  +P++     +   +T TTS  + P L +
Sbjct: 722  DTGSVVSLGHTTPSSDYNNDVISPPSQTPEQSTPSRIRKAKLSSPMT-TTSTSQKPVLGK 780

Query: 1507 LIVSPN 1524
             + +P+
Sbjct: 781  RVATPH 786

---

>Q08CK7:IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 - Danio rerio|
            (Zebrafish) (Brachydanio rerio)
          Length = 598

 Score = 32.7 bits (73), Expect = 8.2
 Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
 Frame = +1

Query: 1333 GCEIKIVET-VPKSDDHIIIISGPAHPGDGISPAQNAILHVQRKITPTTSNKEGPALSRL 1509
            G  IKI     P S   ++I++GP    +    AQ  I    ++       +E    + +
Sbjct: 438  GASIKIAPAEAPDSKMRMVIVTGPP---EAQFKAQGRIYGKLKEENFFGPKEEVKLETHI 494

Query: 1510 IVSPNQVGCLLGKGGSIMAEMRKLSKAHIIVLSKDKIPRGVQNIAEVVQITGDSEAIQEA 1689
             V+    G ++GKGG  + E++ L+ A ++V  +++ P     +  +V+I G   A Q A
Sbjct: 495  KVAAAAAGRVIGKGGKTVNELQNLTAAEVVV-PREQTPDEHDQV--IVKIIGHFYASQLA 551

Query: 1690 LMQITARLRNNLFRDRMASMGPSMQPPFG 1776
                  ++R+ L + +    G  M  P G
Sbjct: 552  ----QRKIRDILTQVKQQQKGGGMGTPQG 576

---

>A4RF61:HSE1_MAGGR Class E vacuolar protein-sorting machinery protein HSE1 - Magnaporthe|
            grisea (Rice blast fungus) (Pyricularia grisea)
          Length = 718

 Score = 32.7 bits (73), Expect = 8.2
 Identities = 37/147 (25%), Positives = 51/147 (34%), Gaps = 27/147 (18%)
 Frame = +1

Query: 883  KDELCQINGELDSVRKGLNAVAQVLFTHPPRESDVVPIVHPSG-SSSHTFDRSDG----- 1044
            KD+  Q+N +    R+   A+ +   +HPP+ S     V P G   S T   + G     
Sbjct: 360  KDDFTQLNEKFIKARRDYEALLETSMSHPPQPSYHQYAVRPQGYGGSPTPYPTQGPPQQD 419

Query: 1045 ----LPPGMPPNLHLPFQGPSH-----------ARGPFDI----IDERPNVAPFSAFP-- 1161
                 PPG  P+ + P     H           A+ PF +    +       P   FP  
Sbjct: 420  PQRFYPPGPHPDQYPPSSPSPHLQRPGGTPGPGAQAPFYVAGAEVPSHGGPHPNQNFPPR 479

Query: 1162 DQRSNIPPFSSFPDALMHGNASVPPEP 1242
            D    IP     P  L    AS  P P
Sbjct: 480  DPGQRIPSAGKQPARLQTQQASSSPPP 506

---

>A1CEK6:HSE1_ASPCL Class E vacuolar protein-sorting machinery protein hse1 - Aspergillus|
            clavatus
          Length = 599

 Score = 32.7 bits (73), Expect = 8.2
 Identities = 26/101 (25%), Positives = 37/101 (36%)
 Frame = +1

Query: 883  KDELCQINGELDSVRKGLNAVAQVLFTHPPRESDVVPIVHPSGSSSHTFDRSDGLPPGMP 1062
            KDE  Q+N +    R+   ++ +   +HPP+     P   P G  + T     G P G P
Sbjct: 344  KDEFTQLNEKFIKARRDYESLLEASMSHPPQPQYARPGQPPYGYPAPT--GPHGYPQGAP 401

Query: 1063 PNLHLPFQGPSHARGPFDIIDERPNVAPFSAFPDQRSNIPP 1185
                  +  P          D+     P S  PD R   PP
Sbjct: 402  QPDPQRYFSPRPQ-------DQTHMYPPTSQSPDPRGRTPP 435


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 480,779,549
Number of extensions: 10943750
Number of successful extensions: 33866
Number of sequences better than 10.0: 72
Number of HSP's gapped: 33750
Number of HSP's successfully gapped: 176
Length of query: 907
Length of database: 100,686,439
Length adjustment: 122
Effective length of query: 785
Effective length of database: 67,222,449
Effective search space: 52769622465
Effective search space used: 52769622465
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---