No.
Definition
Score (bits)
E Value
1 ref|NM_001049060.1| Oryza sativa (japonica cultivar-group) Os01g...
656
0.0
2 dbj|AK058731.1| Oryza sativa (japonica cultivar-group) cDNA clon...
656
0.0
3 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
256
4e-64
4 dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D...
256
4e-64
5 gb|AY107314.1| Zea mays PCO076491 mRNA sequence
151
2e-32
6 gb|AC139579.3| Mus musculus BAC clone RP23-139E6 from chromosome...
50
0.043
7 ref|NM_001006059.1| Danio rerio chromogranin A (chga), mRNA >gi|...
48
0.17
8 gb|CP000383.1| Cytophaga hutchinsonii ATCC 33406, complete genome
46
0.67
9 gb|AC170589.2| Mus musculus chromosome 3, clone wi1-2412A20, com...
46
0.67
10 gb|AE001408.1| Plasmodium falciparum 3D7 chromosome 2 section 45...
46
0.67
11 gb|AC165315.5| Mus musculus chromosome 3, clone RP24-205J15, com...
46
0.67
12 gb|AC138394.7| Mus musculus chromosome 3, clone RP23-333D8, comp...
46
0.67
13 gb|AC124529.3| Mus musculus BAC clone RP23-411I8 from chromosome...
46
0.67
14 gb|AC114817.3| Mus musculus BAC clone RP23-28O15 from 14, comple...
46
0.67
15 gb|AC121869.2| Mus musculus BAC clone RP24-121C10 from 17, compl...
46
0.67
16 gb|AC009717.15| Homo sapiens chromosome 18, clone RP11-534N16, c...
46
0.67
17 emb|AL929011.11| Mouse DNA sequence from clone RP23-55O12 on chr...
46
0.67
18 gb|AC015916.13| Homo sapiens chromosome 17, clone CTD-2339F15, c...
46
0.67
19 gb|AC124067.10| Homo sapiens chromosome 8, clone RP11-150O12, co...
46
0.67
20 dbj|AP006302.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1...
46
0.67
21 gb|AF105148.1|AF105148 Picea abies clone PA9D9 repetitive DNA se...
46
0.67
22 gb|AC171501.2| Mus musculus BAC clone RP23-255N3 from chromosome...
46
0.67
23 gb|AC147152.3| Mus musculus BAC clone RP24-257J19 from 3, comple...
46
0.67
24 gb|AC140369.2| Mus musculus BAC clone RP23-200L3 from 3, complet...
46
0.67
25 emb|Z72378.1|MMVKIS60 M.musculus DNA for anonymous fragment IS60
46
0.67
26 dbj|AP000068.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen...
46
0.67
27 ref|NM_001056757.1| Oryza sativa (japonica cultivar-group) Os03g...
44
2.6
28 ref|XM_525349.2| PREDICTED: Pan troglodytes potassium voltage-ga...
44
2.6
29 gb|AC147568.5| Mus musculus chromosome 7 clone RP23-15J23, compl...
44
2.6
30 gb|AC122442.4| Mus musculus BAC clone RP24-230D14 from chromosom...
44
2.6
31 gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosom...
44
2.6
32 gb|AC121914.3| Mus musculus BAC clone RP24-186A10 from chromosom...
44
2.6
33 gb|AC122906.4| Mus musculus BAC clone RP23-47D11 from 10, comple...
44
2.6
34 gb|AC084384.1| Mus musculus BAC clone RP23-24F24 from 15, comple...
44
2.6
35 gb|AC121847.2| Mus musculus BAC clone RP24-86M13 from 3, complet...
44
2.6
36 gb|AC004911.1| Homo sapiens PAC clone RP5-870F17 from 7, complet...
44
2.6
37 gb|AC138270.12| Mus musculus chromosome 7, clone RP23-323F17, co...
44
2.6
38 gb|AY129465.1| Homo sapiens polycystic kidney and hepatic diseas...
44
2.6
39 emb|AL773599.11| Mouse DNA sequence from clone RP23-326I8 on chr...
44
2.6
40 emb|CT025565.5| Mouse DNA sequence from clone RP24-126K5 on chro...
44
2.6
41 gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genom...
44
2.6
42 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
44
2.6
43 gb|AC148299.3| Pan troglodytes BAC clone CH251-484A18 from chrom...
44
2.6
44 emb|AL445251.4| Human DNA sequence from clone RP11-704L16 on chr...
44
2.6
45 emb|AL121946.20|HSDJ357H1 Human DNA sequence from clone RP3-357H...
44
2.6
46 emb|AL035685.21|HS791K14 Human DNA sequence from clone RP4-791K1...
44
2.6
47 emb|AL096774.9|HSDJ144C9 Human DNA sequence from clone RP1-144C9...
44
2.6
48 gb|S80994.1| MLC-2=myosin light chain 2 {promoter} [rats, Wistar...
44
2.6
49 emb|X68302.1|HSDRK1 H.sapiens h-DRK1 gene for transmembrane protein
44
2.6
50 emb|AJ296304.1|MMU296304 Mus musculus lmo1 gene for putative hum...
44
2.6
51 gb|AC022146.8| Homo sapiens chromosome 19 clone CTD-3020H12, com...
44
2.6
52 gb|AC154337.2| Mus musculus BAC clone RP23-254P20 from chromosom...
44
2.6
53 dbj|AK101145.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
2.6
54 dbj|AK069760.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
2.6
55 dbj|AK067678.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
2.6
56 dbj|AK065781.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
2.6
57 ref|NM_004975.2| Homo sapiens potassium voltage-gated channel, S...
44
2.6
58 gb|BC110573.1| Homo sapiens potassium voltage-gated channel, Sha...
44
2.6
59 gb|BC110572.1| Homo sapiens potassium voltage-gated channel, Sha...
44
2.6
60 emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on ch...
44
2.6
61 gb|AC005862.1|AC005862 Homo sapiens clone UWGC:g1564a209 from 7p...
44
2.6
62 gb|AC139316.4| Mus musculus BAC clone RP24-500I24 from 3, comple...
44
2.6
63 gb|AC147221.4| Mus musculus BAC clone RP23-58K20 from 7, complet...
44
2.6
64 gb|AC147615.3| Mus musculus BAC clone RP23-408N24 from 10, compl...
44
2.6
65 gb|AF026005.1|AF026005 Homo sapiens delayed rectifier potassium ...
44
2.6
66 emb|AL954824.2| Mouse DNA sequence from clone RP23-326I8 on chro...
44
2.6
67 gb|AC161865.4| Mus musculus chromosome 19, clone RP23-218F7, com...
44
2.6
68 gb|DQ272236.1| Homo sapiens G protein-coupled receptor 154 (GPR1...
44
2.6
69 gb|U26708.1|RNU26708 Rattus norvegicus cardiac myosin light chai...
44
2.6
70 gb|M30298.1|RATMLCB1 Rat cardiac myosin light chain 2 (MLC-2) ge...
44
2.6
71 gb|L02840.1|HUMKV21CH Homo sapiens potassium channel Kv2.1 mRNA,...
44
2.6
>ref|NM_001049060.1 | Oryza sativa (japonica cultivar-group) Os01g0235800 (Os01g0235800)
mRNA, partial cds
Length = 1783
Score = 656 bits (331), Expect = 0.0
Identities = 783/933 (83%), Gaps = 3/933 (0%)
Strand = Plus / Plus
Query: 1194 ttttcctgatgctctcatgcatggtaatgcttcagttcctccagaacctctcactttcag 1253
||||||||| ||||| |||||||| ||| ||||| || || ||||| || ||||| ||
Sbjct: 351 ttttcctgaagctctaatgcatggccatggctcagtcccacctgaaccccttacttttag 410
Query: 1254 gctattatgttcaagtgacaaggtcggaagtattatagggaagggtggaaacattatcaa 1313
| | ||||| |||||||||||||| ||| |||| ||||||||||||||||||| ||||||
Sbjct: 411 gttgttatgctcaagtgacaaggttggaggtataatagggaagggtggaaacaatatcaa 470
Query: 1314 gactattcagaaagatacaggttgtgaaataaaaattgttgagactgttccaaagtcaga 1373
| |||||||||| |||||||| ||||||||||| || |||| ||||||||||| || ||
Sbjct: 471 gtctattcagaatgatacaggctgtgaaataaaggttcttgatactgttccaaaatctga 530
Query: 1374 tgatcacatcataattatctctggacctgcgcacccaggtgatggcatttccccagcaca 1433
|||| |||| || ||||||| ||||||||||| || |||||||| |||||||| |||||
Sbjct: 531 agatcgcatcgtatttatctcaggacctgcgcatccgggtgatggaatttcccctgcaca 590
Query: 1434 gaatgcaattctgcatgtgcagcgtaaaattacgccaaccacctctaacaaggagggtcc 1493
||||||||||||||||||||||||||||||| || ||| || | ||||||||||||
Sbjct: 591 gaatgcaattctgcatgtgcagcgtaaaattgtaccgacctccaacaccaaggagggtcc 650
Query: 1494 tgcattatctaggctgatcgtttcacctaaccaagttggctgcctccttggcaaaggtgg 1553
||| ||| ||||||||| |||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 651 tgcgatatgtaggctgattgtttcaccgaaccaagttggttgccttcttggcaaaggtgg 710
Query: 1554 cagtatcatggctgaaatgaggaagctgtcaaaagctcatataatagtgttgagcaaaga 1613
|||||||| ||||||||||||||||| ||| ||| ||||| |||||| ||||||||||
Sbjct: 711 tagtatcatagctgaaatgaggaagctatcaggagcacatattatagtgctgagcaaaga 770
Query: 1614 caagataccaaggggtgtacaaaatattgctgaagttgttcagataaccggggattctga 1673
|||||| |||| |||||| | | | | || ||||||||||||||| | |||| |||||
Sbjct: 771 caagatcccaaagggtgtcccagaaaatgatgaagttgttcagattagtggggcctctga 830
Query: 1674 ggctattcaggaagctctgatgcagataactgctaggctacgtaacaatcttttccggga 1733
||||||||||||||||| |||||||||||||| || || || ||| |||||||||||||
Sbjct: 831 agctattcaggaagctctaatgcagataactgcaagactgcggaaccatcttttccggga 890
Query: 1734 cagaatggcttcaatgggtcccagcatgcagccaccttttggtttgctggatcctcagtt 1793
|||||||||||||| | || | |||||||||||||||||||| |||||||||||||
Sbjct: 891 cagaatggcttcaacagtccctaatgtgcagccaccttttggtttggtggatcctcagtt 950
Query: 1794 tggtgcatttccgggaatccatgaatctacatctcctaggatttatcctaatgcatctca 1853
|||| ||| | |||||| |||||| |||| |||||||||||||| |||||||| ||||
Sbjct: 951 tggttcatatgcgggaaaccatgattctatatctcctaggatttttcctaatgtgcctca 1010
Query: 1854 gtttcataaagatttcatgggacgaccattggatgagatgtctgctccttggaccacaaa 1913
||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1011 gtttcataaagattttataggacgaccattggatgagatgtctgctccttggaccatgaa 1070
Query: 1914 gggcatgcaggatgttggtgatccgatgtcaatatctggcgttcctggaatggcacacag 1973
||||||||||| |||||||||||| || ||| | ||| | || |||||||| || ||
Sbjct: 1071 gggcatgcaggttgttggtgatccaatttcattgcctgatatcccaggaatggcgcatag 1130
Query: 1974 gggaattggtggattttctggtcctgttcattcatcta---ggccaatcataactggaaa 2030
||||| ||||||||| |||| |||| ||| |||||| ||| |||||||| | |
Sbjct: 1131 aggaatgggtggatttcctgggcctggtcagccatctatcgtatcaaccataactgcaga 1190
Query: 2031 tatcatggttccaagattaattatacctgccctatgcgggcatgatggaggttgtttgaa 2090
| ||||||| |||| |||| || ||||| | ||||| ||| | |||||||| ||||| ||
Sbjct: 1191 tgtcatggtcccaaaattagttttaccttctctatgtggggaagatggaggctgtttaaa 1250
Query: 2091 tatgattcgcgagttttcaggagctaagataac 2123
| ||||| ||||||||||| |||||||||||
Sbjct: 1251 cagaattcgtgagttttcaggggctaagataac 1283
Score = 167 bits (84), Expect = 3e-37
Identities = 189/224 (84%)
Strand = Plus / Plus
Query: 760 gtgctagatagccaagtaggtccgcttttgggaattcgaggtagtgtgattaagcagatg 819
|||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 1 gtgctagacagccaagtaggttggcttttgggaaagaatggtagtgtgattaagcaaatg 60
Query: 820 tccgctgatagtggctgtgaaatccgagtttcaaaggaaaatcttcctttatgtgcttta 879
|| |||| || | |||||||| |||||||||||||| || ||||| ||||||||||||
Sbjct: 61 tctactgacagctgttgtgaaattcgagtttcaaaggacaagcttccattatgtgcttta 120
Query: 880 ctcaaagatgaactttgtcagattaatggagagcttgactcagtcaggaaaggtctgaat 939
| | |||||||||||| ||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 121 ccccgagatgaactttgccagatcactggagagctcgactcagtcaggaaaggtctgaat 180
Query: 940 gcagtggctcaagtgctctttactcacccccctagggaaagtga 983
|||| ||||| |||| |||||||| || |||| ||| |||||
Sbjct: 181 acagttgctcagttgctatttactcatcctcctaaggagagtga 224
Score = 103 bits (52), Expect = 3e-18
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 2165 tgatatctggcacaccggatcagatgcatgcagcccgaagtcttgttcaagcatttgttc 2224
||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||| |
Sbjct: 1325 tgatatccggcacaccagaccagatgcatgcagcccgaagtcttattcaagcatttgtcc 1384
Query: 2225 taagtgaaccac 2236
||||||||||||
Sbjct: 1385 taagtgaaccac 1396
Score = 79.8 bits (40), Expect = 5e-11
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1037 cagatggtcttcctccaggaatgccacctaaccttcatctcccttttcaagggcca 1092
|||||| ||||||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 275 cagatgttcttcctccaggaatgcaacctaatctccatctcccttttcaagggcca 330
>dbj|AK058731.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F10, full
insert sequence
Length = 1783
Score = 656 bits (331), Expect = 0.0
Identities = 783/933 (83%), Gaps = 3/933 (0%)
Strand = Plus / Plus
Query: 1194 ttttcctgatgctctcatgcatggtaatgcttcagttcctccagaacctctcactttcag 1253
||||||||| ||||| |||||||| ||| ||||| || || ||||| || ||||| ||
Sbjct: 351 ttttcctgaagctctaatgcatggccatggctcagtcccacctgaaccccttacttttag 410
Query: 1254 gctattatgttcaagtgacaaggtcggaagtattatagggaagggtggaaacattatcaa 1313
| | ||||| |||||||||||||| ||| |||| ||||||||||||||||||| ||||||
Sbjct: 411 gttgttatgctcaagtgacaaggttggaggtataatagggaagggtggaaacaatatcaa 470
Query: 1314 gactattcagaaagatacaggttgtgaaataaaaattgttgagactgttccaaagtcaga 1373
| |||||||||| |||||||| ||||||||||| || |||| ||||||||||| || ||
Sbjct: 471 gtctattcagaatgatacaggctgtgaaataaaggttcttgatactgttccaaaatctga 530
Query: 1374 tgatcacatcataattatctctggacctgcgcacccaggtgatggcatttccccagcaca 1433
|||| |||| || ||||||| ||||||||||| || |||||||| |||||||| |||||
Sbjct: 531 agatcgcatcgtatttatctcaggacctgcgcatccgggtgatggaatttcccctgcaca 590
Query: 1434 gaatgcaattctgcatgtgcagcgtaaaattacgccaaccacctctaacaaggagggtcc 1493
||||||||||||||||||||||||||||||| || ||| || | ||||||||||||
Sbjct: 591 gaatgcaattctgcatgtgcagcgtaaaattgtaccgacctccaacaccaaggagggtcc 650
Query: 1494 tgcattatctaggctgatcgtttcacctaaccaagttggctgcctccttggcaaaggtgg 1553
||| ||| ||||||||| |||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 651 tgcgatatgtaggctgattgtttcaccgaaccaagttggttgccttcttggcaaaggtgg 710
Query: 1554 cagtatcatggctgaaatgaggaagctgtcaaaagctcatataatagtgttgagcaaaga 1613
|||||||| ||||||||||||||||| ||| ||| ||||| |||||| ||||||||||
Sbjct: 711 tagtatcatagctgaaatgaggaagctatcaggagcacatattatagtgctgagcaaaga 770
Query: 1614 caagataccaaggggtgtacaaaatattgctgaagttgttcagataaccggggattctga 1673
|||||| |||| |||||| | | | | || ||||||||||||||| | |||| |||||
Sbjct: 771 caagatcccaaagggtgtcccagaaaatgatgaagttgttcagattagtggggcctctga 830
Query: 1674 ggctattcaggaagctctgatgcagataactgctaggctacgtaacaatcttttccggga 1733
||||||||||||||||| |||||||||||||| || || || ||| |||||||||||||
Sbjct: 831 agctattcaggaagctctaatgcagataactgcaagactgcggaaccatcttttccggga 890
Query: 1734 cagaatggcttcaatgggtcccagcatgcagccaccttttggtttgctggatcctcagtt 1793
|||||||||||||| | || | |||||||||||||||||||| |||||||||||||
Sbjct: 891 cagaatggcttcaacagtccctaatgtgcagccaccttttggtttggtggatcctcagtt 950
Query: 1794 tggtgcatttccgggaatccatgaatctacatctcctaggatttatcctaatgcatctca 1853
|||| ||| | |||||| |||||| |||| |||||||||||||| |||||||| ||||
Sbjct: 951 tggttcatatgcgggaaaccatgattctatatctcctaggatttttcctaatgtgcctca 1010
Query: 1854 gtttcataaagatttcatgggacgaccattggatgagatgtctgctccttggaccacaaa 1913
||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1011 gtttcataaagattttataggacgaccattggatgagatgtctgctccttggaccatgaa 1070
Query: 1914 gggcatgcaggatgttggtgatccgatgtcaatatctggcgttcctggaatggcacacag 1973
||||||||||| |||||||||||| || ||| | ||| | || |||||||| || ||
Sbjct: 1071 gggcatgcaggttgttggtgatccaatttcattgcctgatatcccaggaatggcgcatag 1130
Query: 1974 gggaattggtggattttctggtcctgttcattcatcta---ggccaatcataactggaaa 2030
||||| ||||||||| |||| |||| ||| |||||| ||| |||||||| | |
Sbjct: 1131 aggaatgggtggatttcctgggcctggtcagccatctatcgtatcaaccataactgcaga 1190
Query: 2031 tatcatggttccaagattaattatacctgccctatgcgggcatgatggaggttgtttgaa 2090
| ||||||| |||| |||| || ||||| | ||||| ||| | |||||||| ||||| ||
Sbjct: 1191 tgtcatggtcccaaaattagttttaccttctctatgtggggaagatggaggctgtttaaa 1250
Query: 2091 tatgattcgcgagttttcaggagctaagataac 2123
| ||||| ||||||||||| |||||||||||
Sbjct: 1251 cagaattcgtgagttttcaggggctaagataac 1283
Score = 167 bits (84), Expect = 3e-37
Identities = 189/224 (84%)
Strand = Plus / Plus
Query: 760 gtgctagatagccaagtaggtccgcttttgggaattcgaggtagtgtgattaagcagatg 819
|||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 1 gtgctagacagccaagtaggttggcttttgggaaagaatggtagtgtgattaagcaaatg 60
Query: 820 tccgctgatagtggctgtgaaatccgagtttcaaaggaaaatcttcctttatgtgcttta 879
|| |||| || | |||||||| |||||||||||||| || ||||| ||||||||||||
Sbjct: 61 tctactgacagctgttgtgaaattcgagtttcaaaggacaagcttccattatgtgcttta 120
Query: 880 ctcaaagatgaactttgtcagattaatggagagcttgactcagtcaggaaaggtctgaat 939
| | |||||||||||| ||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 121 ccccgagatgaactttgccagatcactggagagctcgactcagtcaggaaaggtctgaat 180
Query: 940 gcagtggctcaagtgctctttactcacccccctagggaaagtga 983
|||| ||||| |||| |||||||| || |||| ||| |||||
Sbjct: 181 acagttgctcagttgctatttactcatcctcctaaggagagtga 224
Score = 103 bits (52), Expect = 3e-18
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 2165 tgatatctggcacaccggatcagatgcatgcagcccgaagtcttgttcaagcatttgttc 2224
||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||| |
Sbjct: 1325 tgatatccggcacaccagaccagatgcatgcagcccgaagtcttattcaagcatttgtcc 1384
Query: 2225 taagtgaaccac 2236
||||||||||||
Sbjct: 1385 taagtgaaccac 1396
Score = 79.8 bits (40), Expect = 5e-11
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1037 cagatggtcttcctccaggaatgccacctaaccttcatctcccttttcaagggcca 1092
|||||| ||||||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 275 cagatgttcttcctccaggaatgcaacctaatctccatctcccttttcaagggcca 330
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
Length = 43261740
Score = 256 bits (129), Expect = 4e-64
Identities = 213/241 (88%)
Strand = Plus / Plus
Query: 1669 tctgaggctattcaggaagctctgatgcagataactgctaggctacgtaacaatcttttc 1728
||||| ||||||||||||||||| |||||||||||||| || || || ||| ||||||||
Sbjct: 7508708 tctgaagctattcaggaagctctaatgcagataactgcaagactgcggaaccatcttttc 7508767
Query: 1729 cgggacagaatggcttcaatgggtcccagcatgcagccaccttttggtttgctggatcct 1788
||||||||||||||||||| | || | |||||||||||||||||||| ||||||||
Sbjct: 7508768 cgggacagaatggcttcaacagtccctaatgtgcagccaccttttggtttggtggatcct 7508827
Query: 1789 cagtttggtgcatttccgggaatccatgaatctacatctcctaggatttatcctaatgca 1848
||||||||| ||| | |||||| |||||| |||| |||||||||||||| ||||||||
Sbjct: 7508828 cagtttggttcatatgcgggaaaccatgattctatatctcctaggatttttcctaatgtg 7508887
Query: 1849 tctcagtttcataaagatttcatgggacgaccattggatgagatgtctgctccttggacc 1908
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 7508888 cctcagtttcataaagattttataggacgaccattggatgagatgtctgctccttggacc 7508947
Query: 1909 a 1909
|
Sbjct: 7508948 a 7508948
Score = 218 bits (110), Expect = 8e-53
Identities = 212/246 (86%)
Strand = Plus / Plus
Query: 1411 ggtgatggcatttccccagcacagaatgcaattctgcatgtgcagcgtaaaattacgcca 1470
|||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 7508097 ggtgatggaatttcccctgcacagaatgcaattctgcatgtgcagcgtaaaattgtaccg 7508156
Query: 1471 accacctctaacaaggagggtcctgcattatctaggctgatcgtttcacctaaccaagtt 1530
||| || | ||||||||||||||| ||| ||||||||| |||||||| |||||||||
Sbjct: 7508157 acctccaacaccaaggagggtcctgcgatatgtaggctgattgtttcaccgaaccaagtt 7508216
Query: 1531 ggctgcctccttggcaaaggtggcagtatcatggctgaaatgaggaagctgtcaaaagct 1590
|| ||||| |||||||||||||| |||||||| ||||||||||||||||| ||| |||
Sbjct: 7508217 ggttgccttcttggcaaaggtggtagtatcatagctgaaatgaggaagctatcaggagca 7508276
Query: 1591 catataatagtgttgagcaaagacaagataccaaggggtgtacaaaatattgctgaagtt 1650
||||| |||||| |||||||||||||||| |||| |||||| | | | | || |||||||
Sbjct: 7508277 catattatagtgctgagcaaagacaagatcccaaagggtgtcccagaaaatgatgaagtt 7508336
Query: 1651 gttcag 1656
||||||
Sbjct: 7508337 gttcag 7508342
Score = 174 bits (88), Expect = 1e-39
Identities = 223/268 (83%)
Strand = Plus / Plus
Query: 160 aagaattcttcagaacacaatggtcgggccaagtggcaaaagacaaaacatgctccttcg 219
|||||||||||||| || |||||||||| ||||||||| || ||||| || | ||| |
Sbjct: 7505911 aagaattcttcagagcaaaatggtcggggcaagtggcagaaaacaaagcacaattctttg 7505970
Query: 220 cagcagcctcagatgacaatacagcctggagttcctcttatccgcattctctgccctact 279
||||||||||| ||| | | || ||||| |||||| || ||||||||||||||||||||
Sbjct: 7505971 cagcagcctcaactgatagtgcaacctggtgttcctattttccgcattctctgccctact 7506030
Query: 280 gagagatgtgggaatgtcattggtaaagctggtagcatcattgcaaagataaggaaagaa 339
| || ||||||||||||||| || | ||| |||||||||||||||||||| ||||
Sbjct: 7506031 tcaaaatctgggaatgtcattggcaagggtggaggcatcattgcaaagataaggcaagag 7506090
Query: 340 aacggagtaaaaattcgggttgatgaagcagtccctggttgtgatgagagagttattgtc 399
| ||||||||||| |||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 7506091 actggagtaaaaatcagggttgatgaagttgtccctggttgtgacgagagggttattgtg 7506150
Query: 400 ataactaccgttgagaaggacaaagaag 427
|||||| || |||| ||||||| |||||
Sbjct: 7506151 ataactgccattgataaggacagagaag 7506178
Score = 157 bits (79), Expect = 3e-34
Identities = 178/211 (84%)
Strand = Plus / Plus
Query: 1194 ttttcctgatgctctcatgcatggtaatgcttcagttcctccagaacctctcactttcag 1253
||||||||| ||||| |||||||| ||| ||||| || || ||||| || ||||| ||
Sbjct: 7507050 ttttcctgaagctctaatgcatggccatggctcagtcccacctgaaccccttacttttag 7507109
Query: 1254 gctattatgttcaagtgacaaggtcggaagtattatagggaagggtggaaacattatcaa 1313
| | ||||| |||||||||||||| ||| |||| ||||||||||||||||||| ||||||
Sbjct: 7507110 gttgttatgctcaagtgacaaggttggaggtataatagggaagggtggaaacaatatcaa 7507169
Query: 1314 gactattcagaaagatacaggttgtgaaataaaaattgttgagactgttccaaagtcaga 1373
| |||||||||| |||||||| ||||||||||| || |||| ||||||||||| || ||
Sbjct: 7507170 gtctattcagaatgatacaggctgtgaaataaaggttcttgatactgttccaaaatctga 7507229
Query: 1374 tgatcacatcataattatctctggacctgcg 1404
|||| |||| || ||||||| |||||||||
Sbjct: 7507230 agatcgcatcgtatttatctcaggacctgcg 7507260
Score = 129 bits (65), Expect = 6e-26
Identities = 197/241 (81%)
Strand = Plus / Plus
Query: 656 tgaacgccattttgcatgtctttgataggattttcataactgaaagtaaaaatggaactg 715
|||| |||||||||| ||| ||||| ||||||| ||| ||||| |||||||||| |
Sbjct: 7506479 tgaaggccattttgcttgtatttgaccggatttttgtaaatgaaatggaaaatggaacag 7506538
Query: 716 gagatgcaccaggccagaaaactcctgtttccttcagattgttggtgctagatagccaag 775
|||||||| | || ||| || || |||||| || ||||| ||||||||||| |||||||
Sbjct: 7506539 gagatgcatctggtgagagaaatcatgtttcattgagattattggtgctagacagccaag 7506598
Query: 776 taggtccgcttttgggaattcgaggtagtgtgattaagcagatgtccgctgatagtggct 835
||||| ||||||||||| ||||||||||||||||| ||||| |||| || | |
Sbjct: 7506599 taggttggcttttgggaaagaatggtagtgtgattaagcaaatgtctactgacagctgtt 7506658
Query: 836 gtgaaatccgagtttcaaaggaaaatcttcctttatgtgctttactcaaagatgaacttt 895
||||||| |||||||||||||| || ||||| ||||||||||||| | |||||||||||
Sbjct: 7506659 gtgaaattcgagtttcaaaggacaagcttccattatgtgctttaccccgagatgaacttt 7506718
Query: 896 g 896
|
Sbjct: 7506719 g 7506719
Score = 103 bits (52), Expect = 3e-18
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 2165 tgatatctggcacaccggatcagatgcatgcagcccgaagtcttgttcaagcatttgttc 2224
||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||| |
Sbjct: 7510214 tgatatccggcacaccagaccagatgcatgcagcccgaagtcttattcaagcatttgtcc 7510273
Query: 2225 taagtgaaccac 2236
||||||||||||
Sbjct: 7510274 taagtgaaccac 7510285
Score = 79.8 bits (40), Expect = 5e-11
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1037 cagatggtcttcctccaggaatgccacctaaccttcatctcccttttcaagggcca 1092
|||||| ||||||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 7506974 cagatgttcttcctccaggaatgcaacctaatctccatctcccttttcaagggcca 7507029
Score = 77.8 bits (39), Expect = 2e-10
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 897 tcagattaatggagagcttgactcagtcaggaaaggtctgaatgcagtggctcaagtgct 956
|||||| | ||||||||| |||||||||||||||||||||||| |||| ||||| ||||
Sbjct: 7506837 tcagatcactggagagctcgactcagtcaggaaaggtctgaatacagttgctcagttgct 7506896
Query: 957 ctttactcacccccctagggaaagtga 983
|||||||| || |||| ||| |||||
Sbjct: 7506897 atttactcatcctcctaaggagagtga 7506923
>dbj|AP001539.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0708G02
Length = 168976
Score = 256 bits (129), Expect = 4e-64
Identities = 213/241 (88%)
Strand = Plus / Plus
Query: 1669 tctgaggctattcaggaagctctgatgcagataactgctaggctacgtaacaatcttttc 1728
||||| ||||||||||||||||| |||||||||||||| || || || ||| ||||||||
Sbjct: 57500 tctgaagctattcaggaagctctaatgcagataactgcaagactgcggaaccatcttttc 57559
Query: 1729 cgggacagaatggcttcaatgggtcccagcatgcagccaccttttggtttgctggatcct 1788
||||||||||||||||||| | || | |||||||||||||||||||| ||||||||
Sbjct: 57560 cgggacagaatggcttcaacagtccctaatgtgcagccaccttttggtttggtggatcct 57619
Query: 1789 cagtttggtgcatttccgggaatccatgaatctacatctcctaggatttatcctaatgca 1848
||||||||| ||| | |||||| |||||| |||| |||||||||||||| ||||||||
Sbjct: 57620 cagtttggttcatatgcgggaaaccatgattctatatctcctaggatttttcctaatgtg 57679
Query: 1849 tctcagtttcataaagatttcatgggacgaccattggatgagatgtctgctccttggacc 1908
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 57680 cctcagtttcataaagattttataggacgaccattggatgagatgtctgctccttggacc 57739
Query: 1909 a 1909
|
Sbjct: 57740 a 57740
Score = 218 bits (110), Expect = 8e-53
Identities = 212/246 (86%)
Strand = Plus / Plus
Query: 1411 ggtgatggcatttccccagcacagaatgcaattctgcatgtgcagcgtaaaattacgcca 1470
|||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 56889 ggtgatggaatttcccctgcacagaatgcaattctgcatgtgcagcgtaaaattgtaccg 56948
Query: 1471 accacctctaacaaggagggtcctgcattatctaggctgatcgtttcacctaaccaagtt 1530
||| || | ||||||||||||||| ||| ||||||||| |||||||| |||||||||
Sbjct: 56949 acctccaacaccaaggagggtcctgcgatatgtaggctgattgtttcaccgaaccaagtt 57008
Query: 1531 ggctgcctccttggcaaaggtggcagtatcatggctgaaatgaggaagctgtcaaaagct 1590
|| ||||| |||||||||||||| |||||||| ||||||||||||||||| ||| |||
Sbjct: 57009 ggttgccttcttggcaaaggtggtagtatcatagctgaaatgaggaagctatcaggagca 57068
Query: 1591 catataatagtgttgagcaaagacaagataccaaggggtgtacaaaatattgctgaagtt 1650
||||| |||||| |||||||||||||||| |||| |||||| | | | | || |||||||
Sbjct: 57069 catattatagtgctgagcaaagacaagatcccaaagggtgtcccagaaaatgatgaagtt 57128
Query: 1651 gttcag 1656
||||||
Sbjct: 57129 gttcag 57134
Score = 174 bits (88), Expect = 1e-39
Identities = 223/268 (83%)
Strand = Plus / Plus
Query: 160 aagaattcttcagaacacaatggtcgggccaagtggcaaaagacaaaacatgctccttcg 219
|||||||||||||| || |||||||||| ||||||||| || ||||| || | ||| |
Sbjct: 54703 aagaattcttcagagcaaaatggtcggggcaagtggcagaaaacaaagcacaattctttg 54762
Query: 220 cagcagcctcagatgacaatacagcctggagttcctcttatccgcattctctgccctact 279
||||||||||| ||| | | || ||||| |||||| || ||||||||||||||||||||
Sbjct: 54763 cagcagcctcaactgatagtgcaacctggtgttcctattttccgcattctctgccctact 54822
Query: 280 gagagatgtgggaatgtcattggtaaagctggtagcatcattgcaaagataaggaaagaa 339
| || ||||||||||||||| || | ||| |||||||||||||||||||| ||||
Sbjct: 54823 tcaaaatctgggaatgtcattggcaagggtggaggcatcattgcaaagataaggcaagag 54882
Query: 340 aacggagtaaaaattcgggttgatgaagcagtccctggttgtgatgagagagttattgtc 399
| ||||||||||| |||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 54883 actggagtaaaaatcagggttgatgaagttgtccctggttgtgacgagagggttattgtg 54942
Query: 400 ataactaccgttgagaaggacaaagaag 427
|||||| || |||| ||||||| |||||
Sbjct: 54943 ataactgccattgataaggacagagaag 54970
Score = 157 bits (79), Expect = 3e-34
Identities = 178/211 (84%)
Strand = Plus / Plus
Query: 1194 ttttcctgatgctctcatgcatggtaatgcttcagttcctccagaacctctcactttcag 1253
||||||||| ||||| |||||||| ||| ||||| || || ||||| || ||||| ||
Sbjct: 55842 ttttcctgaagctctaatgcatggccatggctcagtcccacctgaaccccttacttttag 55901
Query: 1254 gctattatgttcaagtgacaaggtcggaagtattatagggaagggtggaaacattatcaa 1313
| | ||||| |||||||||||||| ||| |||| ||||||||||||||||||| ||||||
Sbjct: 55902 gttgttatgctcaagtgacaaggttggaggtataatagggaagggtggaaacaatatcaa 55961
Query: 1314 gactattcagaaagatacaggttgtgaaataaaaattgttgagactgttccaaagtcaga 1373
| |||||||||| |||||||| ||||||||||| || |||| ||||||||||| || ||
Sbjct: 55962 gtctattcagaatgatacaggctgtgaaataaaggttcttgatactgttccaaaatctga 56021
Query: 1374 tgatcacatcataattatctctggacctgcg 1404
|||| |||| || ||||||| |||||||||
Sbjct: 56022 agatcgcatcgtatttatctcaggacctgcg 56052
Score = 129 bits (65), Expect = 6e-26
Identities = 197/241 (81%)
Strand = Plus / Plus
Query: 656 tgaacgccattttgcatgtctttgataggattttcataactgaaagtaaaaatggaactg 715
|||| |||||||||| ||| ||||| ||||||| ||| ||||| |||||||||| |
Sbjct: 55271 tgaaggccattttgcttgtatttgaccggatttttgtaaatgaaatggaaaatggaacag 55330
Query: 716 gagatgcaccaggccagaaaactcctgtttccttcagattgttggtgctagatagccaag 775
|||||||| | || ||| || || |||||| || ||||| ||||||||||| |||||||
Sbjct: 55331 gagatgcatctggtgagagaaatcatgtttcattgagattattggtgctagacagccaag 55390
Query: 776 taggtccgcttttgggaattcgaggtagtgtgattaagcagatgtccgctgatagtggct 835
||||| ||||||||||| ||||||||||||||||| ||||| |||| || | |
Sbjct: 55391 taggttggcttttgggaaagaatggtagtgtgattaagcaaatgtctactgacagctgtt 55450
Query: 836 gtgaaatccgagtttcaaaggaaaatcttcctttatgtgctttactcaaagatgaacttt 895
||||||| |||||||||||||| || ||||| ||||||||||||| | |||||||||||
Sbjct: 55451 gtgaaattcgagtttcaaaggacaagcttccattatgtgctttaccccgagatgaacttt 55510
Query: 896 g 896
|
Sbjct: 55511 g 55511
Score = 103 bits (52), Expect = 3e-18
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 2165 tgatatctggcacaccggatcagatgcatgcagcccgaagtcttgttcaagcatttgttc 2224
||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||| |
Sbjct: 59006 tgatatccggcacaccagaccagatgcatgcagcccgaagtcttattcaagcatttgtcc 59065
Query: 2225 taagtgaaccac 2236
||||||||||||
Sbjct: 59066 taagtgaaccac 59077
Score = 79.8 bits (40), Expect = 5e-11
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1037 cagatggtcttcctccaggaatgccacctaaccttcatctcccttttcaagggcca 1092
|||||| ||||||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 55766 cagatgttcttcctccaggaatgcaacctaatctccatctcccttttcaagggcca 55821
Score = 77.8 bits (39), Expect = 2e-10
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 897 tcagattaatggagagcttgactcagtcaggaaaggtctgaatgcagtggctcaagtgct 956
|||||| | ||||||||| |||||||||||||||||||||||| |||| ||||| ||||
Sbjct: 55629 tcagatcactggagagctcgactcagtcaggaaaggtctgaatacagttgctcagttgct 55688
Query: 957 ctttactcacccccctagggaaagtga 983
|||||||| || |||| ||| |||||
Sbjct: 55689 atttactcatcctcctaaggagagtga 55715
>gb|L02840.1 |HUMKV21CH Homo sapiens potassium channel Kv2.1 mRNA, complete cds
Length = 3777
Score = 44.1 bits (22), Expect = 2.6
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 533 ataatgcccatggcaaggaaga 554
||||||||||||||||||||||
Sbjct: 1214 ataatgcccatggcaaggaaga 1193
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 540,126,587
Number of extensions: 29567783
Number of successful extensions: 224304
Number of sequences better than 10.0: 71
Number of HSP's gapped: 224293
Number of HSP's successfully gapped: 104
Length of query: 2721
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2698
Effective length of database: 18,503,978,556
Effective search space: 49923734144088
Effective search space used: 49923734144088
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)