ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf40h08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001061708.1| Oryza sativa (japonica cultivar-group) Os05g0316100 (Os05g0316100) mRNA, complete cds Length = 2347 Score = 1392 bits (702), Expect = 0.0 Identities = 1299/1498 (86%) Strand = Plus / Plus Query: 586 ttctttttcctggagctagaggccgaatgggcaggcctttgcaatggattggcagccggg 645 |||||||||||||||||||||||| | ||||| || |||||||||||| | || || ||| Sbjct: 612 ttctttttcctggagctagaggcccagtgggcgggactttgcaatggactcgcggcaggg 671 Query: 646 gtgatgttggcagcgagtttcgatcttgtgcaagaaggtcagatgtacggcagtgggagg 705 |||||||| || ||||| || ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 672 gtgatgttagcggcgagctttgatcttgtgcaggaagggcaaatgtatggcagtgggagc 731 Query: 706 tgggttgtttttgggattttgagtggtgggatctttatttggctttgcaagaagattctt 765 |||||||| |||||||||||||| || ||| | || || ||||||||||||||| ||||| Sbjct: 732 tgggttgtgtttgggattttgagcggagggtttttcatctggctttgcaagaagtttctt 791 Query: 766 gagcaacatggagaagtaagtatgttggatataaaaggtgctgatgcaagtaaagttatt 825 |||||| ||||||||||||| ||| | |||||||||||||| |||||||||||||||||| Sbjct: 792 gagcaatatggagaagtaagcatgctcgatataaaaggtgcagatgcaagtaaagttatt 851 Query: 826 cttgttgttggaataatgacactccattcttttggcgagggttctggtgttggtgtttcc 885 |||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 852 cttgttgtcggaataatgacactccattcttttggggagggctctggtgtgggtgtttcc 911 Query: 886 tttgttgggtcaaaaggattatctcaaggtcttttagttactatagctatagcagtgcac 945 |||| ||| ||||||||||| |||||||||||||||||||||||||| || || || ||| Sbjct: 912 tttgctggctcaaaaggattctctcaaggtcttttagttactatagccattgctgtacac 971 Query: 946 aacatacctgaaggcctagctgtaagcatggtactatcatctaggggtgtctccccacaa 1005 ||||||||||||||| |||||||||||||| | |||||||| |||||||| ||||||||| Sbjct: 972 aacatacctgaaggcttagctgtaagcatgttgctatcatccaggggtgtatccccacaa 1031 Query: 1006 aaggcaatgctatggagtatcataacatctttaccacagccaattgttgctgtgcctgca 1065 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1032 aaggcaatgatatggagtatcataacatctttaccacagccaattgttgctgtccctgca 1091 Query: 1066 ttcctttgtgccgatgcatttcagaaggtgcttcctttctgtactggttttgctgcgggg 1125 ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| || Sbjct: 1092 ttcctttgtgccgatgcatttcaaaaggtgcttcccttttgtactggttttgctgctgga 1151 Query: 1126 tgcatgatatggattgttattgcagaggttcttcctgatgcttttaaggaagccactcca 1185 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1152 tgcatgatatggattgtaattgctgaggttcttcctgatgcttttaaggaagctgctcca 1211 Query: 1186 tctcaagtagcctctgctggaacacttgctgttgcttttatggaaacattaagtaccgtg 1245 |||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||| ||| Sbjct: 1212 tctcaagttgcttctgccggaacgcttgctgttgctttcatggaaacattgggtacagtg 1271 Query: 1246 cttcagggattcactgatggccacggcttggaagatacatcaggttttttggtatcactt 1305 ||||||||||| |||||||||||| || ||||||||| |||| ||||||||||||||| Sbjct: 1272 cttcagggatttactgatggccacaactcagaagatacagcaggctttttggtatcactt 1331 Query: 1306 gtatttggtcttggtccactttttggaggaattatacttgtcgcattctcgcttgccttc 1365 |||||||| || ||||| ||||||||||||||| ||||||| |||||||| ||| | ||| Sbjct: 1332 gtatttggactaggtcctctttttggaggaattgtacttgttgcattctctcttactttc 1391 Query: 1366 aacatgccacaccctcttcttactggtgtagcatctggcattgccttccgtcttgcttca 1425 | |||||||||||||||| | |||||||||||||| ||||| ||||||||||| || || Sbjct: 1392 agcatgccacaccctcttttgactggtgtagcatcaggcatagccttccgtctcgcagca 1451 Query: 1426 tggaggccattacaacttgtgatgtccttaaagatgggtctctttactaccctgttcctc 1485 ||||| || ||||||||| | ||||| | ||||||||||| ||||| ||| | |||||| Sbjct: 1452 tggagacctttacaacttctaatgtcatcgaagatgggtctatttaccaccttattcctc 1511 Query: 1486 ctactaggaggttcggtcttctaccatcttgcggaagcaagcatccttatggttgttaaa 1545 ||| | |||||||| || | |||||| | || | ||| ||||||| | | ||||| Sbjct: 1512 ctaattggaggttctctcatttaccatgtcgccacatcaaacatccttcagctagttaac 1571 Query: 1546 cacaagaaatcatctgtcaatgtcattacatcgtccagcgggctctctcttagtgtcctc 1605 | ||||||||| ||||| ||||| |||||||| ||| || ||||| |||||||||||| Sbjct: 1572 cgcaagaaatcttctgttaatgtaattacatcatcctcaggcctctcacttagtgtcctc 1631 Query: 1606 acacagcaatcactccttgcttgcgtctgcgtcttccttcatgcctacgccgaagggctt 1665 |||| |||||| ||||||||||||| | ||||||||||| || || || ||||| ||| Sbjct: 1632 acactgcaatcgctccttgcttgcggttctgtcttccttcacgcatatgctgaaggtctt 1691 Query: 1666 gcacttggtgtggcggcacgcaaggcatatggtctaggccgctacatggttcttccagtc 1725 |||||||||||| || |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1692 caacttggtgtggctgcgcgcaaggcttatggtctagggcgctacatggttcttccagtt 1751 Query: 1726 tcccttcacggtctaccacggggtgctgctgttgctagttgtgtatatggtgccactgat 1785 |||||||| ||||||||||| |||||||||||||| || || ||||||||||||||||| Sbjct: 1752 tcccttcatggtctaccacgaggtgctgctgttgcgagctgcatatatggtgccactgat 1811 Query: 1786 agctggcgaggagccttggcagctgcagctctgactgggcttgcaggaccaagcgcggcc 1845 || ||||| | |||||||||||| || ||| |||| || ||||||| |||||||| ||| Sbjct: 1812 agttggcgggcagccttggcagccgctgctttgaccggctttgcagggccaagcgctgcc 1871 Query: 1846 atcagtgcaatccttgcgaagattggctatgatggactggactactggatggtgattgca 1905 |||||||||||||| |||||||||| ||| |||||| |||||||||||||| ||||| Sbjct: 1872 atcagtgcaatcctcgcgaagattgactacagtggactagactactggatggtcattgcc 1931 Query: 1906 tgcggggctttgatcccgagctttggccgtgtcttcagacgctcgctgcggctggacgtg 1965 || || |||||||| || ||||||||||| ||||||| ||||||||| || ||||| || Sbjct: 1932 tgtggtgctttgattccaagctttggccgagtcttcaaacgctcgctaaggttggacatg 1991 Query: 1966 aggaagagtatctgcgggctcctgataggttttggttttgcttgggtgtgcttgatgtcc 2025 ||||||| ||||| ||||| |||||||||| | ||||| | || ||| ||||||| Sbjct: 1992 cggaagagcatctgtgggcttttgataggtttcgcctttgcctctgtatgcctgatgtcg 2051 Query: 2026 accagattcatctgcttgcacacgccttactgcaattcagctccagaagcggtcacat 2083 ||||||||||| ||||||||||| || |||||||| |||||||||||||| ||||||| Sbjct: 2052 accagattcatttgcttgcacactccctactgcaactcagctccagaagcagtcacat 2109
>dbj|AK099474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013024K20, full insert sequence Length = 3213 Score = 1392 bits (702), Expect = 0.0 Identities = 1299/1498 (86%) Strand = Plus / Plus Query: 586 ttctttttcctggagctagaggccgaatgggcaggcctttgcaatggattggcagccggg 645 |||||||||||||||||||||||| | ||||| || |||||||||||| | || || ||| Sbjct: 1552 ttctttttcctggagctagaggcccagtgggcgggactttgcaatggactcgcggcaggg 1611 Query: 646 gtgatgttggcagcgagtttcgatcttgtgcaagaaggtcagatgtacggcagtgggagg 705 |||||||| || ||||| || ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 1612 gtgatgttagcggcgagctttgatcttgtgcaggaagggcaaatgtatggcagtgggagc 1671 Query: 706 tgggttgtttttgggattttgagtggtgggatctttatttggctttgcaagaagattctt 765 |||||||| |||||||||||||| || ||| | || || ||||||||||||||| ||||| Sbjct: 1672 tgggttgtgtttgggattttgagcggagggtttttcatctggctttgcaagaagtttctt 1731 Query: 766 gagcaacatggagaagtaagtatgttggatataaaaggtgctgatgcaagtaaagttatt 825 |||||| ||||||||||||| ||| | |||||||||||||| |||||||||||||||||| Sbjct: 1732 gagcaatatggagaagtaagcatgctcgatataaaaggtgcagatgcaagtaaagttatt 1791 Query: 826 cttgttgttggaataatgacactccattcttttggcgagggttctggtgttggtgtttcc 885 |||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 1792 cttgttgtcggaataatgacactccattcttttggggagggctctggtgtgggtgtttcc 1851 Query: 886 tttgttgggtcaaaaggattatctcaaggtcttttagttactatagctatagcagtgcac 945 |||| ||| ||||||||||| |||||||||||||||||||||||||| || || || ||| Sbjct: 1852 tttgctggctcaaaaggattctctcaaggtcttttagttactatagccattgctgtacac 1911 Query: 946 aacatacctgaaggcctagctgtaagcatggtactatcatctaggggtgtctccccacaa 1005 ||||||||||||||| |||||||||||||| | |||||||| |||||||| ||||||||| Sbjct: 1912 aacatacctgaaggcttagctgtaagcatgttgctatcatccaggggtgtatccccacaa 1971 Query: 1006 aaggcaatgctatggagtatcataacatctttaccacagccaattgttgctgtgcctgca 1065 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1972 aaggcaatgatatggagtatcataacatctttaccacagccaattgttgctgtccctgca 2031 Query: 1066 ttcctttgtgccgatgcatttcagaaggtgcttcctttctgtactggttttgctgcgggg 1125 ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| || Sbjct: 2032 ttcctttgtgccgatgcatttcaaaaggtgcttcccttttgtactggttttgctgctgga 2091 Query: 1126 tgcatgatatggattgttattgcagaggttcttcctgatgcttttaaggaagccactcca 1185 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2092 tgcatgatatggattgtaattgctgaggttcttcctgatgcttttaaggaagctgctcca 2151 Query: 1186 tctcaagtagcctctgctggaacacttgctgttgcttttatggaaacattaagtaccgtg 1245 |||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||| ||| Sbjct: 2152 tctcaagttgcttctgccggaacgcttgctgttgctttcatggaaacattgggtacagtg 2211 Query: 1246 cttcagggattcactgatggccacggcttggaagatacatcaggttttttggtatcactt 1305 ||||||||||| |||||||||||| || ||||||||| |||| ||||||||||||||| Sbjct: 2212 cttcagggatttactgatggccacaactcagaagatacagcaggctttttggtatcactt 2271 Query: 1306 gtatttggtcttggtccactttttggaggaattatacttgtcgcattctcgcttgccttc 1365 |||||||| || ||||| ||||||||||||||| ||||||| |||||||| ||| | ||| Sbjct: 2272 gtatttggactaggtcctctttttggaggaattgtacttgttgcattctctcttactttc 2331 Query: 1366 aacatgccacaccctcttcttactggtgtagcatctggcattgccttccgtcttgcttca 1425 | |||||||||||||||| | |||||||||||||| ||||| ||||||||||| || || Sbjct: 2332 agcatgccacaccctcttttgactggtgtagcatcaggcatagccttccgtctcgcagca 2391 Query: 1426 tggaggccattacaacttgtgatgtccttaaagatgggtctctttactaccctgttcctc 1485 ||||| || ||||||||| | ||||| | ||||||||||| ||||| ||| | |||||| Sbjct: 2392 tggagacctttacaacttctaatgtcatcgaagatgggtctatttaccaccttattcctc 2451 Query: 1486 ctactaggaggttcggtcttctaccatcttgcggaagcaagcatccttatggttgttaaa 1545 ||| | |||||||| || | |||||| | || | ||| ||||||| | | ||||| Sbjct: 2452 ctaattggaggttctctcatttaccatgtcgccacatcaaacatccttcagctagttaac 2511 Query: 1546 cacaagaaatcatctgtcaatgtcattacatcgtccagcgggctctctcttagtgtcctc 1605 | ||||||||| ||||| ||||| |||||||| ||| || ||||| |||||||||||| Sbjct: 2512 cgcaagaaatcttctgttaatgtaattacatcatcctcaggcctctcacttagtgtcctc 2571 Query: 1606 acacagcaatcactccttgcttgcgtctgcgtcttccttcatgcctacgccgaagggctt 1665 |||| |||||| ||||||||||||| | ||||||||||| || || || ||||| ||| Sbjct: 2572 acactgcaatcgctccttgcttgcggttctgtcttccttcacgcatatgctgaaggtctt 2631 Query: 1666 gcacttggtgtggcggcacgcaaggcatatggtctaggccgctacatggttcttccagtc 1725 |||||||||||| || |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 2632 caacttggtgtggctgcgcgcaaggcttatggtctagggcgctacatggttcttccagtt 2691 Query: 1726 tcccttcacggtctaccacggggtgctgctgttgctagttgtgtatatggtgccactgat 1785 |||||||| ||||||||||| |||||||||||||| || || ||||||||||||||||| Sbjct: 2692 tcccttcatggtctaccacgaggtgctgctgttgcgagctgcatatatggtgccactgat 2751 Query: 1786 agctggcgaggagccttggcagctgcagctctgactgggcttgcaggaccaagcgcggcc 1845 || ||||| | |||||||||||| || ||| |||| || ||||||| |||||||| ||| Sbjct: 2752 agttggcgggcagccttggcagccgctgctttgaccggctttgcagggccaagcgctgcc 2811 Query: 1846 atcagtgcaatccttgcgaagattggctatgatggactggactactggatggtgattgca 1905 |||||||||||||| |||||||||| ||| |||||| |||||||||||||| ||||| Sbjct: 2812 atcagtgcaatcctcgcgaagattgactacagtggactagactactggatggtcattgcc 2871 Query: 1906 tgcggggctttgatcccgagctttggccgtgtcttcagacgctcgctgcggctggacgtg 1965 || || |||||||| || ||||||||||| ||||||| ||||||||| || ||||| || Sbjct: 2872 tgtggtgctttgattccaagctttggccgagtcttcaaacgctcgctaaggttggacatg 2931 Query: 1966 aggaagagtatctgcgggctcctgataggttttggttttgcttgggtgtgcttgatgtcc 2025 ||||||| ||||| ||||| |||||||||| | ||||| | || ||| ||||||| Sbjct: 2932 cggaagagcatctgtgggcttttgataggtttcgcctttgcctctgtatgcctgatgtcg 2991 Query: 2026 accagattcatctgcttgcacacgccttactgcaattcagctccagaagcggtcacat 2083 ||||||||||| ||||||||||| || |||||||| |||||||||||||| ||||||| Sbjct: 2992 accagattcatttgcttgcacactccctactgcaactcagctccagaagcagtcacat 3049
>dbj|AK066887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088L23, full insert sequence Length = 2348 Score = 1392 bits (702), Expect = 0.0 Identities = 1299/1498 (86%) Strand = Plus / Plus Query: 586 ttctttttcctggagctagaggccgaatgggcaggcctttgcaatggattggcagccggg 645 |||||||||||||||||||||||| | ||||| || |||||||||||| | || || ||| Sbjct: 613 ttctttttcctggagctagaggcccagtgggcgggactttgcaatggactcgcggcaggg 672 Query: 646 gtgatgttggcagcgagtttcgatcttgtgcaagaaggtcagatgtacggcagtgggagg 705 |||||||| || ||||| || ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 673 gtgatgttagcggcgagctttgatcttgtgcaggaagggcaaatgtatggcagtgggagc 732 Query: 706 tgggttgtttttgggattttgagtggtgggatctttatttggctttgcaagaagattctt 765 |||||||| |||||||||||||| || ||| | || || ||||||||||||||| ||||| Sbjct: 733 tgggttgtgtttgggattttgagcggagggtttttcatctggctttgcaagaagtttctt 792 Query: 766 gagcaacatggagaagtaagtatgttggatataaaaggtgctgatgcaagtaaagttatt 825 |||||| ||||||||||||| ||| | |||||||||||||| |||||||||||||||||| Sbjct: 793 gagcaatatggagaagtaagcatgctcgatataaaaggtgcagatgcaagtaaagttatt 852 Query: 826 cttgttgttggaataatgacactccattcttttggcgagggttctggtgttggtgtttcc 885 |||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 853 cttgttgtcggaataatgacactccattcttttggggagggctctggtgtgggtgtttcc 912 Query: 886 tttgttgggtcaaaaggattatctcaaggtcttttagttactatagctatagcagtgcac 945 |||| ||| ||||||||||| |||||||||||||||||||||||||| || || || ||| Sbjct: 913 tttgctggctcaaaaggattctctcaaggtcttttagttactatagccattgctgtacac 972 Query: 946 aacatacctgaaggcctagctgtaagcatggtactatcatctaggggtgtctccccacaa 1005 ||||||||||||||| |||||||||||||| | |||||||| |||||||| ||||||||| Sbjct: 973 aacatacctgaaggcttagctgtaagcatgttgctatcatccaggggtgtatccccacaa 1032 Query: 1006 aaggcaatgctatggagtatcataacatctttaccacagccaattgttgctgtgcctgca 1065 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1033 aaggcaatgatatggagtatcataacatctttaccacagccaattgttgctgtccctgca 1092 Query: 1066 ttcctttgtgccgatgcatttcagaaggtgcttcctttctgtactggttttgctgcgggg 1125 ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| || Sbjct: 1093 ttcctttgtgccgatgcatttcaaaaggtgcttcccttttgtactggttttgctgctgga 1152 Query: 1126 tgcatgatatggattgttattgcagaggttcttcctgatgcttttaaggaagccactcca 1185 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1153 tgcatgatatggattgtaattgctgaggttcttcctgatgcttttaaggaagctgctcca 1212 Query: 1186 tctcaagtagcctctgctggaacacttgctgttgcttttatggaaacattaagtaccgtg 1245 |||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||| ||| Sbjct: 1213 tctcaagttgcttctgccggaacgcttgctgttgctttcatggaaacattgggtacagtg 1272 Query: 1246 cttcagggattcactgatggccacggcttggaagatacatcaggttttttggtatcactt 1305 ||||||||||| |||||||||||| || ||||||||| |||| ||||||||||||||| Sbjct: 1273 cttcagggatttactgatggccacaactcagaagatacagcaggctttttggtatcactt 1332 Query: 1306 gtatttggtcttggtccactttttggaggaattatacttgtcgcattctcgcttgccttc 1365 |||||||| || ||||| ||||||||||||||| ||||||| |||||||| ||| | ||| Sbjct: 1333 gtatttggactaggtcctctttttggaggaattgtacttgttgcattctctcttactttc 1392 Query: 1366 aacatgccacaccctcttcttactggtgtagcatctggcattgccttccgtcttgcttca 1425 | |||||||||||||||| | |||||||||||||| ||||| ||||||||||| || || Sbjct: 1393 agcatgccacaccctcttttgactggtgtagcatcaggcatagccttccgtctcgcagca 1452 Query: 1426 tggaggccattacaacttgtgatgtccttaaagatgggtctctttactaccctgttcctc 1485 ||||| || ||||||||| | ||||| | ||||||||||| ||||| ||| | |||||| Sbjct: 1453 tggagacctttacaacttctaatgtcatcgaagatgggtctatttaccaccttattcctc 1512 Query: 1486 ctactaggaggttcggtcttctaccatcttgcggaagcaagcatccttatggttgttaaa 1545 ||| | |||||||| || | |||||| | || | ||| ||||||| | | ||||| Sbjct: 1513 ctaattggaggttctctcatttaccatgtcgccacatcaaacatccttcagctagttaac 1572 Query: 1546 cacaagaaatcatctgtcaatgtcattacatcgtccagcgggctctctcttagtgtcctc 1605 | ||||||||| ||||| ||||| |||||||| ||| || ||||| |||||||||||| Sbjct: 1573 cgcaagaaatcttctgttaatgtaattacatcatcctcaggcctctcacttagtgtcctc 1632 Query: 1606 acacagcaatcactccttgcttgcgtctgcgtcttccttcatgcctacgccgaagggctt 1665 |||| |||||| ||||||||||||| | ||||||||||| || || || ||||| ||| Sbjct: 1633 acactgcaatcgctccttgcttgcggttctgtcttccttcacgcatatgctgaaggtctt 1692 Query: 1666 gcacttggtgtggcggcacgcaaggcatatggtctaggccgctacatggttcttccagtc 1725 |||||||||||| || |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1693 caacttggtgtggctgcgcgcaaggcttatggtctagggcgctacatggttcttccagtt 1752 Query: 1726 tcccttcacggtctaccacggggtgctgctgttgctagttgtgtatatggtgccactgat 1785 |||||||| ||||||||||| |||||||||||||| || || ||||||||||||||||| Sbjct: 1753 tcccttcatggtctaccacgaggtgctgctgttgcgagctgcatatatggtgccactgat 1812 Query: 1786 agctggcgaggagccttggcagctgcagctctgactgggcttgcaggaccaagcgcggcc 1845 || ||||| | |||||||||||| || ||| |||| || ||||||| |||||||| ||| Sbjct: 1813 agttggcgggcagccttggcagccgctgctttgaccggctttgcagggccaagcgctgcc 1872 Query: 1846 atcagtgcaatccttgcgaagattggctatgatggactggactactggatggtgattgca 1905 |||||||||||||| |||||||||| ||| |||||| |||||||||||||| ||||| Sbjct: 1873 atcagtgcaatcctcgcgaagattgactacagtggactagactactggatggtcattgcc 1932 Query: 1906 tgcggggctttgatcccgagctttggccgtgtcttcagacgctcgctgcggctggacgtg 1965 || || |||||||| || ||||||||||| ||||||| ||||||||| || ||||| || Sbjct: 1933 tgtggtgctttgattccaagctttggccgagtcttcaaacgctcgctaaggttggacatg 1992 Query: 1966 aggaagagtatctgcgggctcctgataggttttggttttgcttgggtgtgcttgatgtcc 2025 ||||||| ||||| ||||| |||||||||| | ||||| | || ||| ||||||| Sbjct: 1993 cggaagagcatctgtgggcttttgataggtttcgcctttgcctctgtatgcctgatgtcg 2052 Query: 2026 accagattcatctgcttgcacacgccttactgcaattcagctccagaagcggtcacat 2083 ||||||||||| ||||||||||| || |||||||| |||||||||||||| ||||||| Sbjct: 2053 accagattcatttgcttgcacactccctactgcaactcagctccagaagcagtcacat 2110
>gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0065C11, complete sequence Length = 141578 Score = 579 bits (292), Expect = e-161 Identities = 679/808 (84%) Strand = Plus / Minus Query: 1276 gaagatacatcaggttttttggtatcacttgtatttggtcttggtccactttttggagga 1335 ||||||||| |||| ||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 3573 gaagatacagcaggctttttggtatcacttgtatttggactaggtcctctttttggagga 3514 Query: 1336 attatacttgtcgcattctcgcttgccttcaacatgccacaccctcttcttactggtgta 1395 ||| ||||||| |||||||| ||| | |||| |||||||||||||||| | ||||||||| Sbjct: 3513 attgtacttgttgcattctctcttactttcagcatgccacaccctcttttgactggtgta 3454 Query: 1396 gcatctggcattgccttccgtcttgcttcatggaggccattacaacttgtgatgtcctta 1455 ||||| ||||| ||||||||||| || ||||||| || ||||||||| | ||||| | Sbjct: 3453 gcatcaggcatagccttccgtctcgcagcatggagacctttacaacttctaatgtcatcg 3394 Query: 1456 aagatgggtctctttactaccctgttcctcctactaggaggttcggtcttctaccatctt 1515 ||||||||||| ||||| ||| | ||||||||| | |||||||| || | |||||| | Sbjct: 3393 aagatgggtctatttaccaccttattcctcctaattggaggttctctcatttaccatgtc 3334 Query: 1516 gcggaagcaagcatccttatggttgttaaacacaagaaatcatctgtcaatgtcattaca 1575 || | ||| ||||||| | | ||||| | ||||||||| ||||| ||||| |||||| Sbjct: 3333 gccacatcaaacatccttcagctagttaaccgcaagaaatcttctgttaatgtaattaca 3274 Query: 1576 tcgtccagcgggctctctcttagtgtcctcacacagcaatcactccttgcttgcgtctgc 1635 || ||| || ||||| |||||||||||||||| |||||| ||||||||||||| | Sbjct: 3273 tcatcctcaggcctctcacttagtgtcctcacactgcaatcgctccttgcttgcggttct 3214 Query: 1636 gtcttccttcatgcctacgccgaagggcttgcacttggtgtggcggcacgcaaggcatat 1695 ||||||||||| || || || ||||| ||| |||||||||||| || |||||||| ||| Sbjct: 3213 gtcttccttcacgcatatgctgaaggtcttcaacttggtgtggctgcgcgcaaggcttat 3154 Query: 1696 ggtctaggccgctacatggttcttccagtctcccttcacggtctaccacggggtgctgct 1755 |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 3153 ggtctagggcgctacatggttcttccagtttcccttcatggtctaccacgaggtgctgct 3094 Query: 1756 gttgctagttgtgtatatggtgccactgatagctggcgaggagccttggcagctgcagct 1815 ||||| || || ||||||||||||||||||| ||||| | |||||||||||| || ||| Sbjct: 3093 gttgcgagctgcatatatggtgccactgatagttggcgggcagccttggcagccgctgct 3034 Query: 1816 ctgactgggcttgcaggaccaagcgcggccatcagtgcaatccttgcgaagattggctat 1875 |||| || ||||||| |||||||| ||||||||||||||||| |||||||||| ||| Sbjct: 3033 ttgaccggctttgcagggccaagcgctgccatcagtgcaatcctcgcgaagattgactac 2974 Query: 1876 gatggactggactactggatggtgattgcatgcggggctttgatcccgagctttggccgt 1935 |||||| |||||||||||||| ||||| || || |||||||| || ||||||||||| Sbjct: 2973 agtggactagactactggatggtcattgcctgtggtgctttgattccaagctttggccga 2914 Query: 1936 gtcttcagacgctcgctgcggctggacgtgaggaagagtatctgcgggctcctgataggt 1995 ||||||| ||||||||| || ||||| || ||||||| ||||| ||||| |||||||| Sbjct: 2913 gtcttcaaacgctcgctaaggttggacatgcggaagagcatctgtgggcttttgataggt 2854 Query: 1996 tttggttttgcttgggtgtgcttgatgtccaccagattcatctgcttgcacacgccttac 2055 || | ||||| | || ||| ||||||| ||||||||||| ||||||||||| || ||| Sbjct: 2853 ttcgcctttgcctctgtatgcctgatgtcgaccagattcatttgcttgcacactccctac 2794 Query: 2056 tgcaattcagctccagaagcggtcacat 2083 ||||| |||||||||||||| ||||||| Sbjct: 2793 tgcaactcagctccagaagcagtcacat 2766 Score = 389 bits (196), Expect = e-104 Identities = 262/284 (92%) Strand = Plus / Minus Query: 761 ttcttgagcaacatggagaagtaagtatgttggatataaaaggtgctgatgcaagtaaag 820 ||||||||||| ||||||||||||| ||| | |||||||||||||| ||||||||||||| Sbjct: 8456 ttcttgagcaatatggagaagtaagcatgctcgatataaaaggtgcagatgcaagtaaag 8397 Query: 821 ttattcttgttgttggaataatgacactccattcttttggcgagggttctggtgttggtg 880 ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||| Sbjct: 8396 ttattcttgttgtcggaataatgacactccattcttttggggagggctctggtgtgggtg 8337 Query: 881 tttcctttgttgggtcaaaaggattatctcaaggtcttttagttactatagctatagcag 940 ||||||||| ||| ||||||||||| |||||||||||||||||||||||||| || || | Sbjct: 8336 tttcctttgctggctcaaaaggattctctcaaggtcttttagttactatagccattgctg 8277 Query: 941 tgcacaacatacctgaaggcctagctgtaagcatggtactatcatctaggggtgtctccc 1000 | |||||||||||||||||| |||||||||||||| | |||||||| |||||||| |||| Sbjct: 8276 tacacaacatacctgaaggcttagctgtaagcatgttgctatcatccaggggtgtatccc 8217 Query: 1001 cacaaaaggcaatgctatggagtatcataacatctttaccacag 1044 |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 8216 cacaaaaggcaatgatatggagtatcataacatctttaccacag 8173 Score = 202 bits (102), Expect = 4e-48 Identities = 126/134 (94%) Strand = Plus / Minus Query: 1041 acagccaattgttgctgtgcctgcattcctttgtgccgatgcatttcagaaggtgcttcc 1100 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 3992 acagccaattgttgctgtccctgcattcctttgtgccgatgcatttcaaaaggtgcttcc 3933 Query: 1101 tttctgtactggttttgctgcggggtgcatgatatggattgttattgcagaggttcttcc 1160 || ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 3932 cttttgtactggttttgctgctggatgcatgatatggattgtaattgctgaggttcttcc 3873 Query: 1161 tgatgcttttaagg 1174 |||||||||||||| Sbjct: 3872 tgatgcttttaagg 3859 Score = 155 bits (78), Expect = 8e-34 Identities = 150/174 (86%) Strand = Plus / Minus Query: 586 ttctttttcctggagctagaggccgaatgggcaggcctttgcaatggattggcagccggg 645 |||||||||||||||||||||||| | ||||| || |||||||||||| | || || ||| Sbjct: 9212 ttctttttcctggagctagaggcccagtgggcgggactttgcaatggactcgcggcaggg 9153 Query: 646 gtgatgttggcagcgagtttcgatcttgtgcaagaaggtcagatgtacggcagtgggagg 705 |||||||| || ||||| || ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 9152 gtgatgttagcggcgagctttgatcttgtgcaggaagggcaaatgtatggcagtgggagc 9093 Query: 706 tgggttgtttttgggattttgagtggtgggatctttatttggctttgcaagaag 759 |||||||| |||||||||||||| || ||| | || || ||||||||||||||| Sbjct: 9092 tgggttgtgtttgggattttgagcggagggtttttcatctggctttgcaagaag 9039 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Minus Query: 1172 aggaagccactccatctcaagtagcctctgctggaacacttgctgttgcttttatggaaa 1231 ||||||| ||||||||||||| || ||||| ||||| |||||||||||||| ||||||| Sbjct: 3761 aggaagctgctccatctcaagttgcttctgccggaacgcttgctgttgctttcatggaaa 3702 Query: 1232 cattaagtaccgtgcttcagggattcactgatggccac 1269 |||| |||| |||||||||||||| |||||||||||| Sbjct: 3701 cattgggtacagtgcttcagggatttactgatggccac 3664
>gb|AC104712.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1333_C12, complete sequence Length = 102029 Score = 579 bits (292), Expect = e-161 Identities = 679/808 (84%) Strand = Plus / Minus Query: 1276 gaagatacatcaggttttttggtatcacttgtatttggtcttggtccactttttggagga 1335 ||||||||| |||| ||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 96276 gaagatacagcaggctttttggtatcacttgtatttggactaggtcctctttttggagga 96217 Query: 1336 attatacttgtcgcattctcgcttgccttcaacatgccacaccctcttcttactggtgta 1395 ||| ||||||| |||||||| ||| | |||| |||||||||||||||| | ||||||||| Sbjct: 96216 attgtacttgttgcattctctcttactttcagcatgccacaccctcttttgactggtgta 96157 Query: 1396 gcatctggcattgccttccgtcttgcttcatggaggccattacaacttgtgatgtcctta 1455 ||||| ||||| ||||||||||| || ||||||| || ||||||||| | ||||| | Sbjct: 96156 gcatcaggcatagccttccgtctcgcagcatggagacctttacaacttctaatgtcatcg 96097 Query: 1456 aagatgggtctctttactaccctgttcctcctactaggaggttcggtcttctaccatctt 1515 ||||||||||| ||||| ||| | ||||||||| | |||||||| || | |||||| | Sbjct: 96096 aagatgggtctatttaccaccttattcctcctaattggaggttctctcatttaccatgtc 96037 Query: 1516 gcggaagcaagcatccttatggttgttaaacacaagaaatcatctgtcaatgtcattaca 1575 || | ||| ||||||| | | ||||| | ||||||||| ||||| ||||| |||||| Sbjct: 96036 gccacatcaaacatccttcagctagttaaccgcaagaaatcttctgttaatgtaattaca 95977 Query: 1576 tcgtccagcgggctctctcttagtgtcctcacacagcaatcactccttgcttgcgtctgc 1635 || ||| || ||||| |||||||||||||||| |||||| ||||||||||||| | Sbjct: 95976 tcatcctcaggcctctcacttagtgtcctcacactgcaatcgctccttgcttgcggttct 95917 Query: 1636 gtcttccttcatgcctacgccgaagggcttgcacttggtgtggcggcacgcaaggcatat 1695 ||||||||||| || || || ||||| ||| |||||||||||| || |||||||| ||| Sbjct: 95916 gtcttccttcacgcatatgctgaaggtcttcaacttggtgtggctgcgcgcaaggcttat 95857 Query: 1696 ggtctaggccgctacatggttcttccagtctcccttcacggtctaccacggggtgctgct 1755 |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 95856 ggtctagggcgctacatggttcttccagtttcccttcatggtctaccacgaggtgctgct 95797 Query: 1756 gttgctagttgtgtatatggtgccactgatagctggcgaggagccttggcagctgcagct 1815 ||||| || || ||||||||||||||||||| ||||| | |||||||||||| || ||| Sbjct: 95796 gttgcgagctgcatatatggtgccactgatagttggcgggcagccttggcagccgctgct 95737 Query: 1816 ctgactgggcttgcaggaccaagcgcggccatcagtgcaatccttgcgaagattggctat 1875 |||| || ||||||| |||||||| ||||||||||||||||| |||||||||| ||| Sbjct: 95736 ttgaccggctttgcagggccaagcgctgccatcagtgcaatcctcgcgaagattgactac 95677 Query: 1876 gatggactggactactggatggtgattgcatgcggggctttgatcccgagctttggccgt 1935 |||||| |||||||||||||| ||||| || || |||||||| || ||||||||||| Sbjct: 95676 agtggactagactactggatggtcattgcctgtggtgctttgattccaagctttggccga 95617 Query: 1936 gtcttcagacgctcgctgcggctggacgtgaggaagagtatctgcgggctcctgataggt 1995 ||||||| ||||||||| || ||||| || ||||||| ||||| ||||| |||||||| Sbjct: 95616 gtcttcaaacgctcgctaaggttggacatgcggaagagcatctgtgggcttttgataggt 95557 Query: 1996 tttggttttgcttgggtgtgcttgatgtccaccagattcatctgcttgcacacgccttac 2055 || | ||||| | || ||| ||||||| ||||||||||| ||||||||||| || ||| Sbjct: 95556 ttcgcctttgcctctgtatgcctgatgtcgaccagattcatttgcttgcacactccctac 95497 Query: 2056 tgcaattcagctccagaagcggtcacat 2083 ||||| |||||||||||||| ||||||| Sbjct: 95496 tgcaactcagctccagaagcagtcacat 95469 Score = 389 bits (196), Expect = e-104 Identities = 262/284 (92%) Strand = Plus / Minus Query: 761 ttcttgagcaacatggagaagtaagtatgttggatataaaaggtgctgatgcaagtaaag 820 ||||||||||| ||||||||||||| ||| | |||||||||||||| ||||||||||||| Sbjct: 101159 ttcttgagcaatatggagaagtaagcatgctcgatataaaaggtgcagatgcaagtaaag 101100 Query: 821 ttattcttgttgttggaataatgacactccattcttttggcgagggttctggtgttggtg 880 ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||| Sbjct: 101099 ttattcttgttgtcggaataatgacactccattcttttggggagggctctggtgtgggtg 101040 Query: 881 tttcctttgttgggtcaaaaggattatctcaaggtcttttagttactatagctatagcag 940 ||||||||| ||| ||||||||||| |||||||||||||||||||||||||| || || | Sbjct: 101039 tttcctttgctggctcaaaaggattctctcaaggtcttttagttactatagccattgctg 100980 Query: 941 tgcacaacatacctgaaggcctagctgtaagcatggtactatcatctaggggtgtctccc 1000 | |||||||||||||||||| |||||||||||||| | |||||||| |||||||| |||| Sbjct: 100979 tacacaacatacctgaaggcttagctgtaagcatgttgctatcatccaggggtgtatccc 100920 Query: 1001 cacaaaaggcaatgctatggagtatcataacatctttaccacag 1044 |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100919 cacaaaaggcaatgatatggagtatcataacatctttaccacag 100876 Score = 202 bits (102), Expect = 4e-48 Identities = 126/134 (94%) Strand = Plus / Minus Query: 1041 acagccaattgttgctgtgcctgcattcctttgtgccgatgcatttcagaaggtgcttcc 1100 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 96695 acagccaattgttgctgtccctgcattcctttgtgccgatgcatttcaaaaggtgcttcc 96636 Query: 1101 tttctgtactggttttgctgcggggtgcatgatatggattgttattgcagaggttcttcc 1160 || ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 96635 cttttgtactggttttgctgctggatgcatgatatggattgtaattgctgaggttcttcc 96576 Query: 1161 tgatgcttttaagg 1174 |||||||||||||| Sbjct: 96575 tgatgcttttaagg 96562 Score = 155 bits (78), Expect = 8e-34 Identities = 150/174 (86%) Strand = Plus / Minus Query: 586 ttctttttcctggagctagaggccgaatgggcaggcctttgcaatggattggcagccggg 645 |||||||||||||||||||||||| | ||||| || |||||||||||| | || || ||| Sbjct: 101915 ttctttttcctggagctagaggcccagtgggcgggactttgcaatggactcgcggcaggg 101856 Query: 646 gtgatgttggcagcgagtttcgatcttgtgcaagaaggtcagatgtacggcagtgggagg 705 |||||||| || ||||| || ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 101855 gtgatgttagcggcgagctttgatcttgtgcaggaagggcaaatgtatggcagtgggagc 101796 Query: 706 tgggttgtttttgggattttgagtggtgggatctttatttggctttgcaagaag 759 |||||||| |||||||||||||| || ||| | || || ||||||||||||||| Sbjct: 101795 tgggttgtgtttgggattttgagcggagggtttttcatctggctttgcaagaag 101742 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Minus Query: 1172 aggaagccactccatctcaagtagcctctgctggaacacttgctgttgcttttatggaaa 1231 ||||||| ||||||||||||| || ||||| ||||| |||||||||||||| ||||||| Sbjct: 96464 aggaagctgctccatctcaagttgcttctgccggaacgcttgctgttgctttcatggaaa 96405 Query: 1232 cattaagtaccgtgcttcagggattcactgatggccac 1269 |||| |||| |||||||||||||| |||||||||||| Sbjct: 96404 cattgggtacagtgcttcagggatttactgatggccac 96367
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 579 bits (292), Expect = e-161 Identities = 679/808 (84%) Strand = Plus / Minus Query: 1276 gaagatacatcaggttttttggtatcacttgtatttggtcttggtccactttttggagga 1335 ||||||||| |||| ||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 14465568 gaagatacagcaggctttttggtatcacttgtatttggactaggtcctctttttggagga 14465509 Query: 1336 attatacttgtcgcattctcgcttgccttcaacatgccacaccctcttcttactggtgta 1395 ||| ||||||| |||||||| ||| | |||| |||||||||||||||| | ||||||||| Sbjct: 14465508 attgtacttgttgcattctctcttactttcagcatgccacaccctcttttgactggtgta 14465449 Query: 1396 gcatctggcattgccttccgtcttgcttcatggaggccattacaacttgtgatgtcctta 1455 ||||| ||||| ||||||||||| || ||||||| || ||||||||| | ||||| | Sbjct: 14465448 gcatcaggcatagccttccgtctcgcagcatggagacctttacaacttctaatgtcatcg 14465389 Query: 1456 aagatgggtctctttactaccctgttcctcctactaggaggttcggtcttctaccatctt 1515 ||||||||||| ||||| ||| | ||||||||| | |||||||| || | |||||| | Sbjct: 14465388 aagatgggtctatttaccaccttattcctcctaattggaggttctctcatttaccatgtc 14465329 Query: 1516 gcggaagcaagcatccttatggttgttaaacacaagaaatcatctgtcaatgtcattaca 1575 || | ||| ||||||| | | ||||| | ||||||||| ||||| ||||| |||||| Sbjct: 14465328 gccacatcaaacatccttcagctagttaaccgcaagaaatcttctgttaatgtaattaca 14465269 Query: 1576 tcgtccagcgggctctctcttagtgtcctcacacagcaatcactccttgcttgcgtctgc 1635 || ||| || ||||| |||||||||||||||| |||||| ||||||||||||| | Sbjct: 14465268 tcatcctcaggcctctcacttagtgtcctcacactgcaatcgctccttgcttgcggttct 14465209 Query: 1636 gtcttccttcatgcctacgccgaagggcttgcacttggtgtggcggcacgcaaggcatat 1695 ||||||||||| || || || ||||| ||| |||||||||||| || |||||||| ||| Sbjct: 14465208 gtcttccttcacgcatatgctgaaggtcttcaacttggtgtggctgcgcgcaaggcttat 14465149 Query: 1696 ggtctaggccgctacatggttcttccagtctcccttcacggtctaccacggggtgctgct 1755 |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 14465148 ggtctagggcgctacatggttcttccagtttcccttcatggtctaccacgaggtgctgct 14465089 Query: 1756 gttgctagttgtgtatatggtgccactgatagctggcgaggagccttggcagctgcagct 1815 ||||| || || ||||||||||||||||||| ||||| | |||||||||||| || ||| Sbjct: 14465088 gttgcgagctgcatatatggtgccactgatagttggcgggcagccttggcagccgctgct 14465029 Query: 1816 ctgactgggcttgcaggaccaagcgcggccatcagtgcaatccttgcgaagattggctat 1875 |||| || ||||||| |||||||| ||||||||||||||||| |||||||||| ||| Sbjct: 14465028 ttgaccggctttgcagggccaagcgctgccatcagtgcaatcctcgcgaagattgactac 14464969 Query: 1876 gatggactggactactggatggtgattgcatgcggggctttgatcccgagctttggccgt 1935 |||||| |||||||||||||| ||||| || || |||||||| || ||||||||||| Sbjct: 14464968 agtggactagactactggatggtcattgcctgtggtgctttgattccaagctttggccga 14464909 Query: 1936 gtcttcagacgctcgctgcggctggacgtgaggaagagtatctgcgggctcctgataggt 1995 ||||||| ||||||||| || ||||| || ||||||| ||||| ||||| |||||||| Sbjct: 14464908 gtcttcaaacgctcgctaaggttggacatgcggaagagcatctgtgggcttttgataggt 14464849 Query: 1996 tttggttttgcttgggtgtgcttgatgtccaccagattcatctgcttgcacacgccttac 2055 || | ||||| | || ||| ||||||| ||||||||||| ||||||||||| || ||| Sbjct: 14464848 ttcgcctttgcctctgtatgcctgatgtcgaccagattcatttgcttgcacactccctac 14464789 Query: 2056 tgcaattcagctccagaagcggtcacat 2083 ||||| |||||||||||||| ||||||| Sbjct: 14464788 tgcaactcagctccagaagcagtcacat 14464761 Score = 389 bits (196), Expect = e-104 Identities = 262/284 (92%) Strand = Plus / Minus Query: 761 ttcttgagcaacatggagaagtaagtatgttggatataaaaggtgctgatgcaagtaaag 820 ||||||||||| ||||||||||||| ||| | |||||||||||||| ||||||||||||| Sbjct: 14470451 ttcttgagcaatatggagaagtaagcatgctcgatataaaaggtgcagatgcaagtaaag 14470392 Query: 821 ttattcttgttgttggaataatgacactccattcttttggcgagggttctggtgttggtg 880 ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||| Sbjct: 14470391 ttattcttgttgtcggaataatgacactccattcttttggggagggctctggtgtgggtg 14470332 Query: 881 tttcctttgttgggtcaaaaggattatctcaaggtcttttagttactatagctatagcag 940 ||||||||| ||| ||||||||||| |||||||||||||||||||||||||| || || | Sbjct: 14470331 tttcctttgctggctcaaaaggattctctcaaggtcttttagttactatagccattgctg 14470272 Query: 941 tgcacaacatacctgaaggcctagctgtaagcatggtactatcatctaggggtgtctccc 1000 | |||||||||||||||||| |||||||||||||| | |||||||| |||||||| |||| Sbjct: 14470271 tacacaacatacctgaaggcttagctgtaagcatgttgctatcatccaggggtgtatccc 14470212 Query: 1001 cacaaaaggcaatgctatggagtatcataacatctttaccacag 1044 |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14470211 cacaaaaggcaatgatatggagtatcataacatctttaccacag 14470168 Score = 202 bits (102), Expect = 4e-48 Identities = 126/134 (94%) Strand = Plus / Minus Query: 1041 acagccaattgttgctgtgcctgcattcctttgtgccgatgcatttcagaaggtgcttcc 1100 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 14465987 acagccaattgttgctgtccctgcattcctttgtgccgatgcatttcaaaaggtgcttcc 14465928 Query: 1101 tttctgtactggttttgctgcggggtgcatgatatggattgttattgcagaggttcttcc 1160 || ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 14465927 cttttgtactggttttgctgctggatgcatgatatggattgtaattgctgaggttcttcc 14465868 Query: 1161 tgatgcttttaagg 1174 |||||||||||||| Sbjct: 14465867 tgatgcttttaagg 14465854 Score = 155 bits (78), Expect = 8e-34 Identities = 150/174 (86%) Strand = Plus / Minus Query: 586 ttctttttcctggagctagaggccgaatgggcaggcctttgcaatggattggcagccggg 645 |||||||||||||||||||||||| | ||||| || |||||||||||| | || || ||| Sbjct: 14471207 ttctttttcctggagctagaggcccagtgggcgggactttgcaatggactcgcggcaggg 14471148 Query: 646 gtgatgttggcagcgagtttcgatcttgtgcaagaaggtcagatgtacggcagtgggagg 705 |||||||| || ||||| || ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 14471147 gtgatgttagcggcgagctttgatcttgtgcaggaagggcaaatgtatggcagtgggagc 14471088 Query: 706 tgggttgtttttgggattttgagtggtgggatctttatttggctttgcaagaag 759 |||||||| |||||||||||||| || ||| | || || ||||||||||||||| Sbjct: 14471087 tgggttgtgtttgggattttgagcggagggtttttcatctggctttgcaagaag 14471034 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Minus Query: 1172 aggaagccactccatctcaagtagcctctgctggaacacttgctgttgcttttatggaaa 1231 ||||||| ||||||||||||| || ||||| ||||| |||||||||||||| ||||||| Sbjct: 14465756 aggaagctgctccatctcaagttgcttctgccggaacgcttgctgttgctttcatggaaa 14465697 Query: 1232 cattaagtaccgtgcttcagggattcactgatggccac 1269 |||| |||| |||||||||||||| |||||||||||| Sbjct: 14465696 cattgggtacagtgcttcagggatttactgatggccac 14465659 Score = 42.1 bits (21), Expect = 8.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 314 gcttatgagcttgctgaatatctgaagca 342 |||||||||||||||||| |||| ||||| Sbjct: 10240661 gcttatgagcttgctgaagatctaaagca 10240689
>gb|AY108721.1| Zea mays PCO112738 mRNA sequence Length = 1121 Score = 281 bits (142), Expect = 5e-72 Identities = 371/446 (83%), Gaps = 1/446 (0%) Strand = Plus / Plus Query: 1639 ttccttcatgcctacgccgaagggcttgcacttggtgtggcggcacgcaaggcatatggt 1698 |||||||| || || || ||||||||||| || ||||| ||||| |||||||| ||||| Sbjct: 506 ttccttcacgcatatgctgaagggcttgcgctcggtgtcgcggctcgcaaggcctatggc 565 Query: 1699 ctaggccgctacatggttcttccagtctcccttcacggtctaccacggggtgctgctgtt 1758 || ||||||||||||||||| |||| |||||| |||||||| ||||| || ||||| | Sbjct: 566 ctcggccgctacatggttctcccagcctccctccacggtcttccacgtggcgctgccgcg 625 Query: 1759 gctagttgtgtatatggtgccactgatagctggcgaggagccttggcagctgcagctctg 1818 || || || || ||||||||||| ||||||||||| |||||| | || ||||| ||| || Sbjct: 626 gcgagctgcgtgtatggtgccacagatagctggcgtggagcccttgccgctgccgctttg 685 Query: 1819 actgggcttgcaggaccaagcgcggccatcagtgcaatccttgcgaagattggctatgat 1878 || ||||| |||| || ||||| |||||||||||||||||||||||||| | ||||||| Sbjct: 686 acagggctcgcagcgccgagcgccgccatcagtgcaatccttgcgaagatcgactatgat 745 Query: 1879 ggactggactactggatggtgattgcatgc-ggggctttgatcccgagctttggccgtgt 1937 || || |||||||||||||| || || ||| |||||| ||||||| ||||||||||| || Sbjct: 746 gggcttgactactggatggtcatagcgtgcgggggctctgatccccagctttggccgcgt 805 Query: 1938 cttcagacgctcgctgcggctggacgtgaggaagagtatctgcgggctcctgataggttt 1997 |||||| |||||||||||| |||||||| ||||||| || || || ||| ||||| | Sbjct: 806 cttcaggcgctcgctgcggttggacgtgcggaagagcgtcgttggcctgctggtaggtgt 865 Query: 1998 tggttttgcttgggtgtgcttgatgtccaccagattcatctgcttgcacacgccttactg 2057 || || || | |||||||||||||| || ||||||||||| ||||||| |||||||| Sbjct: 866 tgccttcgcctccgtgtgcttgatgtcgactagattcatctgtctgcacactccttactg 925 Query: 2058 caattcagctccagaagcggtcacat 2083 || || ||||||||||| ||||||| Sbjct: 926 taactcggctccagaagccgtcacat 951 Score = 236 bits (119), Expect = 3e-58 Identities = 290/347 (83%) Strand = Plus / Plus Query: 1141 gttattgcagaggttcttcctgatgcttttaaggaagccactccatctcaagtagcctct 1200 ||||| || |||||||||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 8 gttatagcggaggttcttcctgacgcttttaaggaagcaactccatctcaagtagcttct 67 Query: 1201 gctggaacacttgctgttgcttttatggaaacattaagtaccgtgcttcagggattcact 1260 ||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||| || Sbjct: 68 gctggaacactcgctgttgctttcatggaaacattaagtacggtgcttctgggatttaca 127 Query: 1261 gatggccacggcttggaagatacatcaggttttttggtatcacttgtatttggtcttggt 1320 |||||| || ||||||| ||||||| || || ||||||||||| ||||| || ||| Sbjct: 128 gatggcaacaatgtggaagacgcatcaggcttcttagtatcacttgtgtttggactcggt 187 Query: 1321 ccactttttggaggaattatacttgtcgcattctcgcttgccttcaacatgccacaccct 1380 |||||| | || ||||||||||| ||| ||||||| |||| |||| |||||| |||||| Sbjct: 188 ccacttatcggtggaattatactcgtcacattctctcttgggttcagcatgccgcaccct 247 Query: 1381 cttcttactggtgtagcatctggcattgccttccgtcttgcttcatggaggccattacaa 1440 ||||| || ||||| ||||| ||||| || |||||||| || ||||||| || | || Sbjct: 248 cttctcaccggtgtcgcatccggcatagctttccgtctcgcggcatggagacctgtgcag 307 Query: 1441 cttgtgatgtccttaaagatgggtctctttactaccctgttcctcct 1487 || | ||| ||| ||| ||||||||||| || ||||| |||||||| Sbjct: 308 ctcctaatgacctcaaaaatgggtctcttcaccaccctcttcctcct 354
>gb|AC184061.2| Populus trichocarpa clone Pop1-106E19, complete sequence Length = 73441 Score = 163 bits (82), Expect = 3e-36 Identities = 217/262 (82%) Strand = Plus / Minus Query: 761 ttcttgagcaacatggagaagtaagtatgttggatataaaaggtgctgatgcaagtaaag 820 ||||||| ||| |||| |||||||| |||||||| || | |||||||||||||| ||||| Sbjct: 24758 ttcttgaacaatatggggaagtaagcatgttggacattagaggtgctgatgcaactaaag 24699 Query: 821 ttattcttgttgttggaataatgacactccattcttttggcgagggttctggtgttggtg 880 || |||||||| ||||||| ||||| || ||||| ||||| ||||||||||||||||||| Sbjct: 24698 ttgttcttgttattggaattatgactcttcattcatttggggagggttctggtgttggtg 24639 Query: 881 tttcctttgttgggtcaaaaggattatctcaaggtcttttagttactatagctatagcag 940 | || |||| ||| || ||||| || |||||||| ||||| || ||| | || ||||| | Sbjct: 24638 tctcttttgctggctctaaaggcttttctcaaggacttttggtaactttggccatagccg 24579 Query: 941 tgcacaacatacctgaaggcctagctgtaagcatggtactatcatctaggggtgtctccc 1000 ||||||||||||| || || |||| || || ||| | || |||| | |||||| || | Sbjct: 24578 tgcacaacataccggaggggttagcagtgagtatgatgcttgcatcaaagggtgtttctc 24519 Query: 1001 cacaaaaggcaatgctatggag 1022 ||||||| |||||||||||||| Sbjct: 24518 cacaaaatgcaatgctatggag 24497 Score = 46.1 bits (23), Expect = 0.55 Identities = 65/79 (82%) Strand = Plus / Minus Query: 1096 cttcctttctgtactggttttgctgcggggtgcatgatatggattgttattgcagaggtt 1155 ||||||||||| || || |||||||| || || ||||| ||||| || || | ||||| Sbjct: 23569 cttcctttctgcacgggctttgctgctggatgtatgatctggatggtggtttccgaggtg 23510 Query: 1156 cttcctgatgcttttaagg 1174 |||||||||||||| |||| Sbjct: 23509 cttcctgatgctttcaagg 23491 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2038 tgcttgcacacgccttactgcaattc 2063 ||||||||||| |||||||||||||| Sbjct: 21253 tgcttgcacacaccttactgcaattc 21228 Score = 42.1 bits (21), Expect = 8.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 1744 cggggtgctgctgttgctagttgtgtatatggtgccactgatagctggc 1792 |||||||| |||||||||||||| | | ||| || ||||||||||||| Sbjct: 21547 cggggtgcagctgttgctagttgcatctttggggctactgatagctggc 21499
>gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete sequence Length = 113744 Score = 109 bits (55), Expect = 4e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 761 ttcttgagcaacatggagaagtaagtatgttggatataaaaggtgctgatgcaagtaaag 820 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 70232 ttcttgagcaatatggagaagtaagtatgttggatttaaaaggtgctgatgcaacaaaag 70291 Query: 821 ttattcttgttgttggaat 839 || |||||||| ||||||| Sbjct: 70292 ttgttcttgttattggaat 70310
>ref|NM_202527.1| Arabidopsis thaliana metal ion transporter (AT3G08650) mRNA, complete cds Length = 2155 Score = 105 bits (53), Expect = 7e-19 Identities = 242/305 (79%) Strand = Plus / Plus Query: 742 atttggctttgcaagaagattcttgagcaacatggagaagtaagtatgttggatataaaa 801 |||||||| || ||| |||||||||| ||| |||| ||||| |||||| ||||||| ||| Sbjct: 576 atttggctctgtaagcagattcttgaacaatatggtgaagttagtatgctggatattaaa 635 Query: 802 ggtgctgatgcaagtaaagttattcttgttgttggaataatgacactccattcttttggc 861 || || ||||||| ||||||| |||| || | ||||| |||||||| |||||||| || Sbjct: 636 ggcgcagatgcaactaaagttgttctcgtcataggaattatgacacttcattctttcggg 695 Query: 862 gagggttctggtgttggtgtttcctttgttgggtcaaaaggattatctcaaggtctttta 921 || || || || |||||||| || || | ||| |||||||| || ||||| ||| | Sbjct: 696 gaaggatcaggggttggtgtatcattcgctggctcaaaaggttttagccaagggcttctg 755 Query: 922 gttactatagctatagcagtgcacaacatacctgaaggcctagctgtaagcatggtacta 981 || ||| | || ||||| || || ||||| || ||||| | ||||| |||||||| | Sbjct: 756 gtcactttggccatagctgttcataacattccagaagggttggctgttagcatggtgttg 815 Query: 982 tcatctaggggtgtctccccacaaaaggcaatgctatggagtatcataacatctttacca 1041 |||| ||||||||||| |||||||| || ||||| |||||||| |||||||| ||||| Sbjct: 816 gcatcaaggggtgtctctccacaaaatgccatgctctggagtataataacatccttacct 875 Query: 1042 cagcc 1046 ||||| Sbjct: 876 cagcc 880 Score = 79.8 bits (40), Expect = 4e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 1099 cctttctgtactggttttgctgcggggtgcatgatatggattgttattgcagaggttctt 1158 ||||| || ||||| |||||||| || |||||||| ||||| |||||||| || || ||| Sbjct: 933 cctttttgcactggatttgctgccggatgcatgatttggatggttattgctgaagtgctt 992 Query: 1159 cctgatgcttttaaggaagc 1178 |||||||||||||||||||| Sbjct: 993 cctgatgcttttaaggaagc 1012
>ref|NM_111699.4| Arabidopsis thaliana metal ion transporter (AT3G08650) mRNA, complete cds Length = 2302 Score = 105 bits (53), Expect = 7e-19 Identities = 242/305 (79%) Strand = Plus / Plus Query: 742 atttggctttgcaagaagattcttgagcaacatggagaagtaagtatgttggatataaaa 801 |||||||| || ||| |||||||||| ||| |||| ||||| |||||| ||||||| ||| Sbjct: 723 atttggctctgtaagcagattcttgaacaatatggtgaagttagtatgctggatattaaa 782 Query: 802 ggtgctgatgcaagtaaagttattcttgttgttggaataatgacactccattcttttggc 861 || || ||||||| ||||||| |||| || | ||||| |||||||| |||||||| || Sbjct: 783 ggcgcagatgcaactaaagttgttctcgtcataggaattatgacacttcattctttcggg 842 Query: 862 gagggttctggtgttggtgtttcctttgttgggtcaaaaggattatctcaaggtctttta 921 || || || || |||||||| || || | ||| |||||||| || ||||| ||| | Sbjct: 843 gaaggatcaggggttggtgtatcattcgctggctcaaaaggttttagccaagggcttctg 902 Query: 922 gttactatagctatagcagtgcacaacatacctgaaggcctagctgtaagcatggtacta 981 || ||| | || ||||| || || ||||| || ||||| | ||||| |||||||| | Sbjct: 903 gtcactttggccatagctgttcataacattccagaagggttggctgttagcatggtgttg 962 Query: 982 tcatctaggggtgtctccccacaaaaggcaatgctatggagtatcataacatctttacca 1041 |||| ||||||||||| |||||||| || ||||| |||||||| |||||||| ||||| Sbjct: 963 gcatcaaggggtgtctctccacaaaatgccatgctctggagtataataacatccttacct 1022 Query: 1042 cagcc 1046 ||||| Sbjct: 1023 cagcc 1027 Score = 79.8 bits (40), Expect = 4e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 1099 cctttctgtactggttttgctgcggggtgcatgatatggattgttattgcagaggttctt 1158 ||||| || ||||| |||||||| || |||||||| ||||| |||||||| || || ||| Sbjct: 1080 cctttttgcactggatttgctgccggatgcatgatttggatggttattgctgaagtgctt 1139 Query: 1159 cctgatgcttttaaggaagc 1178 |||||||||||||||||||| Sbjct: 1140 cctgatgcttttaaggaagc 1159
>gb|BT000299.1| Arabidopsis thaliana unknown protein (At3g08650) mRNA, complete cds Length = 1896 Score = 105 bits (53), Expect = 7e-19 Identities = 242/305 (79%) Strand = Plus / Plus Query: 742 atttggctttgcaagaagattcttgagcaacatggagaagtaagtatgttggatataaaa 801 |||||||| || ||| |||||||||| ||| |||| ||||| |||||| ||||||| ||| Sbjct: 442 atttggctctgtaagcagattcttgaacaatatggtgaagttagtatgctggatattaaa 501 Query: 802 ggtgctgatgcaagtaaagttattcttgttgttggaataatgacactccattcttttggc 861 || || ||||||| ||||||| |||| || | ||||| |||||||| |||||||| || Sbjct: 502 ggcgcagatgcaactaaagttgttctcgtcataggaattatgacacttcattctttcggg 561 Query: 862 gagggttctggtgttggtgtttcctttgttgggtcaaaaggattatctcaaggtctttta 921 || || || || |||||||| || || | ||| |||||||| || ||||| ||| | Sbjct: 562 gaaggatcaggggttggtgtatcattcgctggctcaaaaggttttagccaagggcttctg 621 Query: 922 gttactatagctatagcagtgcacaacatacctgaaggcctagctgtaagcatggtacta 981 || ||| | || ||||| || || ||||| || ||||| | ||||| |||||||| | Sbjct: 622 gtcactttggccatagctgttcataacattccagaagggttggctgttagcatggtgttg 681 Query: 982 tcatctaggggtgtctccccacaaaaggcaatgctatggagtatcataacatctttacca 1041 |||| ||||||||||| |||||||| || ||||| |||||||| |||||||| ||||| Sbjct: 682 gcatcaaggggtgtctctccacaaaatgccatgctctggagtataataacatccttacct 741 Query: 1042 cagcc 1046 ||||| Sbjct: 742 cagcc 746 Score = 79.8 bits (40), Expect = 4e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 1099 cctttctgtactggttttgctgcggggtgcatgatatggattgttattgcagaggttctt 1158 ||||| || ||||| |||||||| || |||||||| ||||| |||||||| || || ||| Sbjct: 799 cctttttgcactggatttgctgccggatgcatgatttggatggttattgctgaagtgctt 858 Query: 1159 cctgatgcttttaaggaagc 1178 |||||||||||||||||||| Sbjct: 859 cctgatgcttttaaggaagc 878
>gb|AY099763.1| Arabidopsis thaliana unknown protein (At3g08650) mRNA, complete cds Length = 2186 Score = 105 bits (53), Expect = 7e-19 Identities = 242/305 (79%) Strand = Plus / Plus Query: 742 atttggctttgcaagaagattcttgagcaacatggagaagtaagtatgttggatataaaa 801 |||||||| || ||| |||||||||| ||| |||| ||||| |||||| ||||||| ||| Sbjct: 702 atttggctctgtaagcagattcttgaacaatatggtgaagttagtatgctggatattaaa 761 Query: 802 ggtgctgatgcaagtaaagttattcttgttgttggaataatgacactccattcttttggc 861 || || ||||||| ||||||| |||| || | ||||| |||||||| |||||||| || Sbjct: 762 ggcgcagatgcaactaaagttgttctcgtcataggaattatgacacttcattctttcggg 821 Query: 862 gagggttctggtgttggtgtttcctttgttgggtcaaaaggattatctcaaggtctttta 921 || || || || |||||||| || || | ||| |||||||| || ||||| ||| | Sbjct: 822 gaaggatcaggggttggtgtatcattcgctggctcaaaaggttttagccaagggcttctg 881 Query: 922 gttactatagctatagcagtgcacaacatacctgaaggcctagctgtaagcatggtacta 981 || ||| | || ||||| || || ||||| || ||||| | ||||| |||||||| | Sbjct: 882 gtcactttggccatagctgttcataacattccagaagggttggctgttagcatggtgttg 941 Query: 982 tcatctaggggtgtctccccacaaaaggcaatgctatggagtatcataacatctttacca 1041 |||| ||||||||||| |||||||| || ||||| |||||||| |||||||| ||||| Sbjct: 942 gcatcaaggggtgtctctccacaaaatgccatgctctggagtataataacatccttacct 1001 Query: 1042 cagcc 1046 ||||| Sbjct: 1002 cagcc 1006 Score = 79.8 bits (40), Expect = 4e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 1099 cctttctgtactggttttgctgcggggtgcatgatatggattgttattgcagaggttctt 1158 ||||| || ||||| |||||||| || |||||||| ||||| |||||||| || || ||| Sbjct: 1059 cctttttgcactggatttgctgccggatgcatgatttggatggttattgctgaagtgctt 1118 Query: 1159 cctgatgcttttaaggaagc 1178 |||||||||||||||||||| Sbjct: 1119 cctgatgcttttaaggaagc 1138
>emb|BX822928.1|CNS0A7EH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZE10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2069 Score = 97.6 bits (49), Expect = 2e-16 Identities = 241/305 (79%) Strand = Plus / Plus Query: 742 atttggctttgcaagaagattcttgagcaacatggagaagtaagtatgttggatataaaa 801 |||||||| || ||| |||||||||| ||| |||| ||||| |||||| ||||||| ||| Sbjct: 626 atttggctctgtaagcagattcttgaacaatatggtgaagttagtatgctggatattaaa 685 Query: 802 ggtgctgatgcaagtaaagttattcttgttgttggaataatgacactccattcttttggc 861 || || ||||||| ||||||| |||| || | ||||| |||||||| |||||||| || Sbjct: 686 ggcgcagatgcaactaaagttgttctcgtcataggaattatgacacttcattctttcggg 745 Query: 862 gagggttctggtgttggtgtttcctttgttgggtcaaaaggattatctcaaggtctttta 921 || || || || |||||||| || || | ||| |||||||| || ||||| ||| | Sbjct: 746 gaaggatcaggggttggtgtatcattcgctggctcaaaaggttttagccaagggcttctg 805 Query: 922 gttactatagctatagcagtgcacaacatacctgaaggcctagctgtaagcatggtacta 981 || ||| | || ||||| || || ||||| || ||||| | ||| | |||||||| | Sbjct: 806 gtcacttttgccatagctgttcataacattccagaagggtttgcttttagcatggtgttg 865 Query: 982 tcatctaggggtgtctccccacaaaaggcaatgctatggagtatcataacatctttacca 1041 |||| ||||||||||| |||||||| || ||||| |||||||| |||||||| ||||| Sbjct: 866 gcatcaaggggtgtctctccacaaaatgccatgctctggagtataataacatccttacct 925 Query: 1042 cagcc 1046 ||||| Sbjct: 926 cagcc 930 Score = 56.0 bits (28), Expect = 6e-04 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 1099 cctttctgtactggttttgctgcggggtgcatgatatggattgttattgcagaggttctt 1158 ||||| || ||||| |||||||| || ||| |||| ||||| |||||||| || || ||| Sbjct: 985 cctttttgcactggatttgctgccggatgc-tgatttggatggttattgctgaagtgctt 1043 Query: 1159 cctgatgcttttaaggaagc 1178 ||||||| |||||||||||| Sbjct: 1044 cctgatgtttttaaggaagc 1063
>gb|AC189368.1| Brassica rapa subsp. pekinensis clone KBrB047A09, complete sequence Length = 142540 Score = 95.6 bits (48), Expect = 7e-16 Identities = 222/280 (79%) Strand = Plus / Minus Query: 761 ttcttgagcaacatggagaagtaagtatgttggatataaaaggtgctgatgcaagtaaag 820 ||||||| ||| |||| || || || ||| ||||||| |||||||| |||||| |||| Sbjct: 82914 ttcttgaacaatatggtgaggttagcatgctggatatcaaaggtgcagatgcagccaaag 82855 Query: 821 ttattcttgttgttggaataatgacactccattcttttggcgagggttctggtgttggtg 880 || |||| || | ||||| |||||||| |||||||| || ||||| || || ||||||| Sbjct: 82854 ttgttctcgtcataggaatcatgacacttcattctttcggggagggatcaggggttggtg 82795 Query: 881 tttcctttgttgggtcaaaaggattatctcaaggtcttttagttactatagctatagcag 940 | ||||||| ||| ||||| || || |||||| ||| |||| ||| |||| ||||| | Sbjct: 82794 tatcctttgctggttcaaagggttttagtcaagggcttctagtcactttagccatagccg 82735 Query: 941 tgcacaacatacctgaaggcctagctgtaagcatggtactatcatctaggggtgtctccc 1000 | || || || || ||||| | ||||| |||||||| | |||| ||||||||||| | Sbjct: 82734 ttcataatattccagaagggttggctgttagcatggtgttggcatcaaggggtgtctctc 82675 Query: 1001 cacaaaaggcaatgctatggagtatcataacatctttacc 1040 ||||||| || ||||| |||||||| || ||||||||||| Sbjct: 82674 cacaaaatgccatgctctggagtataatcacatctttacc 82635 Score = 50.1 bits (25), Expect = 0.035 Identities = 34/37 (91%) Strand = Plus / Minus Query: 2036 tctgcttgcacacgccttactgcaattcagctccaga 2072 ||||||||||||| |||||||||||||| || ||||| Sbjct: 81350 tctgcttgcacactccttactgcaattctgcaccaga 81314 Score = 48.1 bits (24), Expect = 0.14 Identities = 57/68 (83%) Strand = Plus / Minus Query: 1099 cctttctgtactggttttgctgcggggtgcatgatatggattgttattgcagaggttctt 1158 ||||| || ||||| |||||||| || || ||||| ||||| |||||||| || || ||| Sbjct: 82495 cctttttgcactggatttgctgctggatgtatgatttggatggttattgctgaagtgctt 82436 Query: 1159 cctgatgc 1166 |||||||| Sbjct: 82435 cctgatgc 82428
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 93.7 bits (47), Expect = 3e-15 Identities = 224/283 (79%) Strand = Plus / Minus Query: 758 agattcttgagcaacatggagaagtaagtatgttggatataaaaggtgctgatgcaagta 817 |||||||||| ||| |||| ||||| |||||| ||||||| ||||| || ||||||| || Sbjct: 37217 agattcttgaacaatatggtgaagttagtatgctggatattaaaggcgcagatgcaacta 37158 Query: 818 aagttattcttgttgttggaataatgacactccattcttttggcgagggttctggtgttg 877 ||||| |||| || | ||||| |||||||| |||||||| || || || || || |||| Sbjct: 37157 aagttgttctcgtcataggaattatgacacttcattctttcggggaaggatcaggggttg 37098 Query: 878 gtgtttcctttgttgggtcaaaaggattatctcaaggtcttttagttactatagctatag 937 |||| || || | ||| |||||||| || ||||| ||| | || ||| | || |||| Sbjct: 37097 gtgtatcattcgctggctcaaaaggttttagccaagggcttctggtcactttggccatag 37038 Query: 938 cagtgcacaacatacctgaaggcctagctgtaagcatggtactatcatctaggggtgtct 997 | || || ||||| || ||||| | ||||| |||||||| | |||| |||||||||| Sbjct: 37037 ctgttcataacattccagaagggttggctgttagcatggtgttggcatcaaggggtgtct 36978 Query: 998 ccccacaaaaggcaatgctatggagtatcataacatctttacc 1040 | |||||||| || ||||| |||||||| |||||||| ||||| Sbjct: 36977 ctccacaaaatgccatgctctggagtataataacatccttacc 36935 Score = 71.9 bits (36), Expect = 1e-08 Identities = 66/76 (86%) Strand = Plus / Minus Query: 1099 cctttctgtactggttttgctgcggggtgcatgatatggattgttattgcagaggttctt 1158 ||||| || ||||| |||||||| || |||||||| ||||| |||||||| || || ||| Sbjct: 36793 cctttttgcactggatttgctgccggatgcatgatttggatggttattgctgaagtgctt 36734 Query: 1159 cctgatgcttttaagg 1174 |||||||||||||||| Sbjct: 36733 cctgatgcttttaagg 36718
>emb|BX072583.7| Zebrafish DNA sequence from clone CH211-185M2 in linkage group 13, complete sequence Length = 154297 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2187 aaacaaacattatacaatgatttt 2210 |||||||||||||||||||||||| Sbjct: 130797 aaacaaacattatacaatgatttt 130820
>gb|AC153383.1| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197962 Score = 46.1 bits (23), Expect = 0.55 Identities = 23/23 (100%) Strand = Plus / Minus Query: 791 tggatataaaaggtgctgatgca 813 ||||||||||||||||||||||| Sbjct: 161377 tggatataaaaggtgctgatgca 161355
>gb|AC166247.3| Mus musculus BAC RP23-426E9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191393 Score = 46.1 bits (23), Expect = 0.55 Identities = 23/23 (100%) Strand = Plus / Minus Query: 791 tggatataaaaggtgctgatgca 813 ||||||||||||||||||||||| Sbjct: 68257 tggatataaaaggtgctgatgca 68235
>emb|CT737198.8| Pig DNA sequence from clone CH242-101L9 on chromosome 14, complete sequence Length = 195763 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1802 tggcagctgcagctctgactgg 1823 |||||||||||||||||||||| Sbjct: 179779 tggcagctgcagctctgactgg 179800
>ref|XM_527046.2| PREDICTED: Pan troglodytes solute carrier family 25 member 2 (SLC25A2), mRNA Length = 1417 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1945 cgctcgctgcggctggacgtga 1966 |||||||||||||||||||||| Sbjct: 93 cgctcgctgcggctggacgtga 114
>gb|AC132350.4| Mus musculus BAC clone RP24-95A6 from chromosome 6, complete sequence Length = 177167 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2181 aaagggaaacaaacattataca 2202 |||||||||||||||||||||| Sbjct: 74165 aaagggaaacaaacattataca 74144
>ref|NM_031947.2| Homo sapiens solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2 (SLC25A2), nuclear gene encoding mitochondrial protein, mRNA Length = 1417 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1945 cgctcgctgcggctggacgtga 1966 |||||||||||||||||||||| Sbjct: 93 cgctcgctgcggctggacgtga 114
>gb|AC107725.10| Mus musculus chromosome 5, clone RP23-477O15, complete sequence Length = 169321 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1139 ttgttattgcagaggttcttcc 1160 |||||||||||||||||||||| Sbjct: 154308 ttgttattgcagaggttcttcc 154329
>gb|AC005618.1| Homo sapiens chromosome 5, BAC clone 249h5 (LBNL H149), complete sequence Length = 176714 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1945 cgctcgctgcggctggacgtga 1966 |||||||||||||||||||||| Sbjct: 15465 cgctcgctgcggctggacgtga 15444
>gb|AC159247.2| Mus musculus BAC clone RP24-249C9 from chromosome 6, complete sequence Length = 190474 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2181 aaagggaaacaaacattataca 2202 |||||||||||||||||||||| Sbjct: 21373 aaagggaaacaaacattataca 21352
>gb|AC161187.5| Mus musculus chromosome 5, clone RP23-297H22, complete sequence Length = 171367 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1139 ttgttattgcagaggttcttcc 1160 |||||||||||||||||||||| Sbjct: 16946 ttgttattgcagaggttcttcc 16967
>gb|AC126453.5| Mus musculus BAC clone RP23-244A6 from chromosome 6, complete sequence Length = 172616 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2202 aatgattttgcctggaataatc 2223 |||||||||||||||||||||| Sbjct: 119462 aatgattttgcctggaataatc 119441
>gb|AC163353.3| Mus musculus BAC clone RP23-55G7 from chromosome 6, complete sequence Length = 264135 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2202 aatgattttgcctggaataatc 2223 |||||||||||||||||||||| Sbjct: 9862 aatgattttgcctggaataatc 9841
>gb|AY208943.1| Homo sapiens ornithine transporter 2 (ORNT2) mRNA, ORNT2-Val181 allele, complete cds; nuclear gene for mitochondrial product Length = 1338 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1945 cgctcgctgcggctggacgtga 1966 |||||||||||||||||||||| Sbjct: 21 cgctcgctgcggctggacgtga 42
>dbj|AB158487.1| Sus scrofa PPP1R11, ZNRD1, RNF39, TRIM10, TRIM31, MOG, TRIM15, KRAB, TRIM40 genes, complete cds Length = 143480 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1802 tggcagctgcagctctgactgg 1823 |||||||||||||||||||||| Sbjct: 84660 tggcagctgcagctctgactgg 84639
>gb|AF378119.1| Homo sapiens ornithine transporter 2 (ORNT2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1416 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1945 cgctcgctgcggctggacgtga 1966 |||||||||||||||||||||| Sbjct: 93 cgctcgctgcggctggacgtga 114
>emb|CR382377.10| Zebrafish DNA sequence from clone DKEY-238I13 in linkage group 17, complete sequence Length = 105441 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2188 aacaaacattatacaatgattt 2209 |||||||||||||||||||||| Sbjct: 36317 aacaaacattatacaatgattt 36296
>gb|AC093866.3| Homo sapiens BAC clone RP11-582C12 from 4, complete sequence Length = 159764 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1363 ttcaacatgccacaccctcttc 1384 |||||||||||||||||||||| Sbjct: 81095 ttcaacatgccacaccctcttc 81116
>emb|AJ002284.1|LEAJ2284 Lycopersicon esculentum mRNA for phytochrome B1, alternative transcript type #3 Length = 1786 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 873 tgttggtgtttcctttgttggg 894 |||||||||||||||||||||| Sbjct: 276 tgttggtgtttcctttgttggg 297
>emb|AJ002282.1|LEAJ2282 Lycopersicon esculentum mRNA for phytochrome B1, alternative transcript type #1 Length = 1693 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 873 tgttggtgtttcctttgttggg 894 |||||||||||||||||||||| Sbjct: 183 tgttggtgtttcctttgttggg 204
>emb|AJ002281.1|LEAJ2281 Lycopersicon esculentum PHYB1 gene, complete CDS Length = 10088 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 873 tgttggtgtttcctttgttggg 894 |||||||||||||||||||||| Sbjct: 6038 tgttggtgtttcctttgttggg 6059
>gb|EF064763.1| Homo sapiens chemokine (C-C motif) ligand 26 (CCL26) gene, complete cds Length = 23144 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 881 tttcctttgttgggtcaaaag 901 ||||||||||||||||||||| Sbjct: 18348 tttcctttgttgggtcaaaag 18368
>gb|DQ880238.1| HIV-1 isolate 1182.12-3003-20030219 pol protein (pol) gene, partial cds Length = 630 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 565 gaggttcttcctgatgctttt 545
>gb|DQ879421.1| HIV-1 isolate 1182.12-1345-20030501 pol protein (pol) gene, partial cds Length = 633 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 568 gaggttcttcctgatgctttt 548
>gb|DQ878105.1| HIV-1 isolate 1182.48-3195-20030512 pol protein (pol) gene, partial cds Length = 1497 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 973 gaggttcttcctgatgctttt 953
>ref|NM_001061578.1| Oryza sativa (japonica cultivar-group) Os05g0264200 (Os05g0264200) mRNA, complete cds Length = 2088 Score = 42.1 bits (21), Expect = 8.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 314 gcttatgagcttgctgaatatctgaagca 342 |||||||||||||||||| |||| ||||| Sbjct: 829 gcttatgagcttgctgaagatctaaagca 857
>emb|CT737217.6| Pig DNA sequence from clone CH242-152H1 on chromosome 14, complete sequence Length = 238350 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1801 ttggcagctgcagctctgact 1821 ||||||||||||||||||||| Sbjct: 10448 ttggcagctgcagctctgact 10428
>gb|AC146932.3| Sus scrofa clone RP44-244C10, complete sequence Length = 130764 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1803 ggcagctgcagctctgactgg 1823 ||||||||||||||||||||| Sbjct: 106287 ggcagctgcagctctgactgg 106267
>gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0053F13, from chromosome 5, complete sequence Length = 149538 Score = 42.1 bits (21), Expect = 8.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 314 gcttatgagcttgctgaatatctgaagca 342 |||||||||||||||||| |||| ||||| Sbjct: 140755 gcttatgagcttgctgaagatctaaagca 140783
>gb|AC140364.4| Mus musculus BAC clone RP24-75K5 from chromosome 5, complete sequence Length = 234652 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1439 aacttgtgatgtccttaaaga 1459 ||||||||||||||||||||| Sbjct: 30141 aacttgtgatgtccttaaaga 30161
>gb|AC084310.16| Mus musculus chromosome 1, clone RP23-10C10, complete sequence Length = 194800 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1793 gaggagccttggcagctgcag 1813 ||||||||||||||||||||| Sbjct: 141563 gaggagccttggcagctgcag 141543
>gb|AE006696.1| Sulfolobus solfataricus P2 section 55 of 272 of the complete genome Length = 12777 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1372 ccacaccctcttcttactggt 1392 ||||||||||||||||||||| Sbjct: 7260 ccacaccctcttcttactggt 7280
>gb|AC149479.1| Populus trichocarpa clone Pop1-017N13, complete sequence Length = 129742 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1205 gaacacttgctgttgctttta 1225 ||||||||||||||||||||| Sbjct: 108701 gaacacttgctgttgctttta 108681
>gb|AC149428.1| Populus trichocarpa clone Pop1-080J15, complete sequence Length = 98246 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1205 gaacacttgctgttgctttta 1225 ||||||||||||||||||||| Sbjct: 84073 gaacacttgctgttgctttta 84053
>gb|AC149297.1| Populus trichocarpa clone Pop1-015H07, complete sequence Length = 131790 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1205 gaacacttgctgttgctttta 1225 ||||||||||||||||||||| Sbjct: 115782 gaacacttgctgttgctttta 115802
>gb|AC137607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0006O14, complete sequence Length = 142764 Score = 42.1 bits (21), Expect = 8.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 314 gcttatgagcttgctgaatatctgaagca 342 |||||||||||||||||| |||| ||||| Sbjct: 24226 gcttatgagcttgctgaagatctaaagca 24254
>gb|AC005102.1| Homo sapiens BAC clone CTA-356E1 from 7, complete sequence Length = 106508 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 881 tttcctttgttgggtcaaaag 901 ||||||||||||||||||||| Sbjct: 94888 tttcctttgttgggtcaaaag 94908
>gb|AC133514.4| Mus musculus BAC clone RP23-212F6 from chromosome 5, complete sequence Length = 208083 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1439 aacttgtgatgtccttaaaga 1459 ||||||||||||||||||||| Sbjct: 7453 aacttgtgatgtccttaaaga 7433
>gb|AC093709.2| Pan troglodytes clone RP43-180A19, complete sequence Length = 195646 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 881 tttcctttgttgggtcaaaag 901 ||||||||||||||||||||| Sbjct: 184797 tttcctttgttgggtcaaaag 184777
>dbj|AB202103.1| Homo sapiens C6orf15, C6orf16, CDSN, C6orf17 genes for chromosome 6 open reading frame 15, chromosome 6 open reading frame 16, corneodesmosin, chromosome 6 open reading frame 17, complete cds Length = 30921 Score = 42.1 bits (21), Expect = 8.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1243 gtgcttcagggattcactgatggcc 1267 ||||| ||||||||||||||||||| Sbjct: 16131 gtgctgcagggattcactgatggcc 16155
>gb|AE014837.1| Plasmodium falciparum 3D7 chromosome 11 section 2 of 8 of the complete sequence Length = 257757 Score = 42.1 bits (21), Expect = 8.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2165 tatgaacaaaatgatgaaagggaaacaaa 2193 ||||||||||||||||||| | ||||||| Sbjct: 149262 tatgaacaaaatgatgaaaagaaaacaaa 149290
>gb|AC126957.4| Rattus norvegicus 1 BAC CH230-12B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 215911 Score = 42.1 bits (21), Expect = 8.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1995 ttttggttttgcttgggtgtgcttg 2019 ||||||||||| ||||||||||||| Sbjct: 116403 ttttggttttgtttgggtgtgcttg 116379
>gb|AY802281.1| HIV-1 isolate CA35089 from USA reverse transcriptase (pol) gene, partial cds Length = 900 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 676 gaggttcttcctgatgctttt 656
>gb|AY800694.1| HIV-1 isolate CA3109 from USA reverse transcriptase (pol) gene, partial cds Length = 834 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 676 gaggttcttcctgatgctttt 656
>gb|AY800693.1| HIV-1 isolate CA3107 from USA reverse transcriptase (pol) gene, partial cds Length = 909 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 676 gaggttcttcctgatgctttt 656
>gb|AY800692.1| HIV-1 isolate CA1223 from USA reverse transcriptase (pol) gene, partial cds Length = 909 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 676 gaggttcttcctgatgctttt 656
>gb|AY800691.1| HIV-1 isolate CA3111 from USA reverse transcriptase (pol) gene, partial cds Length = 909 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 676 gaggttcttcctgatgctttt 656
>dbj|AK171237.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630314E18 product:six transmembrane epithelial antigen of the prostate, full insert sequence Length = 2228 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1793 gaggagccttggcagctgcag 1813 ||||||||||||||||||||| Sbjct: 35 gaggagccttggcagctgcag 15
>gb|AC006136.4| Arabidopsis thaliana chromosome 2 clone T13H18 map GPC6, complete sequence Length = 82098 Score = 42.1 bits (21), Expect = 8.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2183 agggaaacaaacattatacaatgat 2207 ||||||||||||||||||| ||||| Sbjct: 10971 agggaaacaaacattataccatgat 10947
>gb|AY032368.1| HIV-1 isolate NC6414-2000 from USA pol polyprotein (pol) gene, partial cds Length = 1128 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 973 gaggttcttcctgatgctttt 953
>gb|AY032266.1| HIV-1 isolate NC6023-2000 from USA pol polyprotein (pol) gene, partial cds Length = 1197 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 973 gaggttcttcctgatgctttt 953
>gb|AY030982.1| HIV-1 isolate NC3983-1999 from USA pol polyprotein (pol) gene, partial cds Length = 1023 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 943 gaggttcttcctgatgctttt 923
>emb|Y18930.1|SSU18930 Sulfolobus solfataricus 281 kb genomic DNA fragment, strain P2 Length = 281244 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1372 ccacaccctcttcttactggt 1392 ||||||||||||||||||||| Sbjct: 123874 ccacaccctcttcttactggt 123854
>emb|CR847548.8| Zebrafish DNA sequence from clone DKEY-185L9 in linkage group 8, complete sequence Length = 249728 Score = 42.1 bits (21), Expect = 8.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 866 gttctggtgttggtgtttcctttgt 890 |||||| |||||||||||||||||| Sbjct: 24606 gttctgttgttggtgtttcctttgt 24630
>emb|BX511143.4| Zebrafish DNA sequence from clone DKEY-258H10 in linkage group 7, complete sequence Length = 88364 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 815 gtaaagttattcttgttgttg 835 ||||||||||||||||||||| Sbjct: 55327 gtaaagttattcttgttgttg 55347
>gb|AF088085.1|AF088085 HIV-1 isolate PCCRT8 from USA reverse transcriptase (pol) gene, partial cds Length = 900 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 676 gaggttcttcctgatgctttt 656
>gb|AY995428.1| HIV-1 isolate 854-292A from Italy pol protein (pol) gene, partial cds Length = 1269 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 973 gaggttcttcctgatgctttt 953
>gb|AF264359.1|AF264359 HIV-1 isolate patient 27 clone a from France reverse transcriptase (pol) gene, partial cds Length = 581 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 567 gaggttcttcctgatgctttt 547
>gb|AF251975.1|AF251975 HIV-1 HAART patient isolate 159 from Italy pol protein (pol) gene, partial cds Length = 1038 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 1017 gaggttcttcctgatgctttt 997
>gb|AC069329.6|AC069329 Genomic Sequence For Arabidopsis thaliana Clone T3P01 From Chromosome V, complete sequence Length = 141430 Score = 42.1 bits (21), Expect = 8.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2178 atgaaagggaaacaaacattataca 2202 ||||||| ||||||||||||||||| Sbjct: 94124 atgaaagtgaaacaaacattataca 94100
>gb|AF514005.1| HIV-1 isolate 641-062000 from USA reverse transcriptase (pol) gene, partial cds Length = 771 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 676 gaggttcttcctgatgctttt 656
>gb|AF456628.1| HIV-1 isolate AR02199 from Argentina pol protein (pol) gene, partial cds Length = 1269 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 973 gaggttcttcctgatgctttt 953
>gb|AY001658.1| HIV-1 isolate 048B04 from USA pol protein (pol) gene, partial cds Length = 984 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 973 gaggttcttcctgatgctttt 953
>gb|AF156845.1|AF156845 HIV-1 isolate patient 2 clone P-1-97 from USA pol polyprotein gene, partial cds Length = 3047 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 1179 gaggttcttcctgatgctttt 1159
>gb|AF156843.1|AF156843 HIV-1 isolate patient 2 clone P-11-96 from USA pol polyprotein gene, partial cds Length = 3041 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 1174 gaggttcttcctgatgctttt 1154
>gb|AY801648.1| HIV-1 isolate CA24684 from USA reverse transcriptase (pol) gene, partial cds Length = 900 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1150 gaggttcttcctgatgctttt 1170 ||||||||||||||||||||| Sbjct: 676 gaggttcttcctgatgctttt 656
>gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complete sequence Length = 163490 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1631 tctgcgtcttccttcatgcct 1651 ||||||||||||||||||||| Sbjct: 139316 tctgcgtcttccttcatgcct 139296
>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence Length = 202209 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1631 tctgcgtcttccttcatgcct 1651 ||||||||||||||||||||| Sbjct: 23407 tctgcgtcttccttcatgcct 23387
>emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chromosome 4, complete sequence Length = 213801 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 ttccctatatcccctcttccc 26 ||||||||||||||||||||| Sbjct: 137694 ttccctatatcccctcttccc 137714
>emb|Z49778.1|SSCRCRYR1 S.scrofa gene for skeletal muscle ryanodine receptor Length = 28080 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1803 ggcagctgcagctctgactgg 1823 ||||||||||||||||||||| Sbjct: 20568 ggcagctgcagctctgactgg 20548
>gb|AY571653.1| Lankanectes corrugatus recombination activating protein 1 (RAG-1) gene, partial cds Length = 1515 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 tgaataatttgttgccagact 246 ||||||||||||||||||||| Sbjct: 1456 tgaataatttgttgccagact 1436
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1198 tctgctggaacacttgctgtt 1218 ||||||||||||||||||||| Sbjct: 70114 tctgctggaacacttgctgtt 70094 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 400,434,340 Number of extensions: 21003277 Number of successful extensions: 112224 Number of sequences better than 10.0: 96 Number of HSP's gapped: 112215 Number of HSP's successfully gapped: 129 Length of query: 2253 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2230 Effective length of database: 18,503,978,556 Effective search space: 41263872179880 Effective search space used: 41263872179880 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
