ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf40h06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073514:Os02g0205000 | 280 | 2e-75 | 2 | AK060003:Os02g0205000 | 280 | 2e-75 | 3 | AK104153:Os02g0652600 | 122 | 3e-28 | 4 | Os02g0524300:Os02g0524300 | 100 | 3e-21 | 5 | AK067093:Os03g0775700 | 37 | 0.018 | 6 | AK067963:Os09g0128600 | 31 | 1.3 | 7 | AK066410:Os09g0128600 | 31 | 1.3 | 8 | AK061636:Os09g0128600 | 31 | 1.3 | 9 | Os01g0660900:Os01g0660900 | 31 | 1.7 | 10 | AK110178: | 30 | 2.2 | 11 | AK103326:Os01g0111900 | 30 | 3.7 | 12 | Os02g0470400:Os02g0470400 | 30 | 3.7 | 13 | AK107530:Os04g0415100 | 29 | 4.9 | 14 | AK110145:Os09g0535200 | 29 | 6.3 |
|---|
>AK073514:Os02g0205000 | Length = 222 Score = 280 bits (715), Expect = 2e-75 Identities = 144/186 (77%), Positives = 151/186 (81%) Frame = +2 Query: 191 VKHLSTCGFTPPTGNRFISGDVVPASSGFCAKFLMARGLSTVGXXXXXXXXXXXXXXXXX 370 +KHLS+C + P GN +SGD V S GFC + RGLSTVG Sbjct: 38 IKHLSSCSWIRPFGNSIVSGDSVH-SHGFCVNTMPMRGLSTVGSAEVSVEEESSDSPGVE 96 Query: 371 HPPRIKFKRPDKTARHIMNILNKEAVDKVHSEREIPDVQPGCIIQMRLQVPENKRRESTL 550 HPPRIKFKRPDKTARHIMNILNKEAVDKV EREIPDVQPGCIIQMRLQVPENKRRESTL Sbjct: 97 HPPRIKFKRPDKTARHIMNILNKEAVDKVRGEREIPDVQPGCIIQMRLQVPENKRRESTL 156 Query: 551 KGIVIARRNAGINTTFRLRRLVAGVGVESVFPLYSPNIKEMKILDRKKVRRAKLYYLRDR 730 KGIVI RRNAGINTTFRLRRLVAGVGVESVFPLYSPNIKE+K+LDRKKVRRAKLYYLRDR Sbjct: 157 KGIVIGRRNAGINTTFRLRRLVAGVGVESVFPLYSPNIKEIKVLDRKKVRRAKLYYLRDR 216 Query: 731 MNALKK 748 MNALKK Sbjct: 217 MNALKK 222
>AK060003:Os02g0205000 | Length = 222 Score = 280 bits (715), Expect = 2e-75 Identities = 144/186 (77%), Positives = 151/186 (81%) Frame = +2 Query: 191 VKHLSTCGFTPPTGNRFISGDVVPASSGFCAKFLMARGLSTVGXXXXXXXXXXXXXXXXX 370 +KHLS+C + P GN +SGD V S GFC + RGLSTVG Sbjct: 38 IKHLSSCSWIRPFGNSIVSGDSVH-SHGFCVNTMPMRGLSTVGSAEVSVEEESSDSPGVE 96 Query: 371 HPPRIKFKRPDKTARHIMNILNKEAVDKVHSEREIPDVQPGCIIQMRLQVPENKRRESTL 550 HPPRIKFKRPDKTARHIMNILNKEAVDKV EREIPDVQPGCIIQMRLQVPENKRRESTL Sbjct: 97 HPPRIKFKRPDKTARHIMNILNKEAVDKVRGEREIPDVQPGCIIQMRLQVPENKRRESTL 156 Query: 551 KGIVIARRNAGINTTFRLRRLVAGVGVESVFPLYSPNIKEMKILDRKKVRRAKLYYLRDR 730 KGIVI RRNAGINTTFRLRRLVAGVGVESVFPLYSPNIKE+K+LDRKKVRRAKLYYLRDR Sbjct: 157 KGIVIGRRNAGINTTFRLRRLVAGVGVESVFPLYSPNIKEIKVLDRKKVRRAKLYYLRDR 216 Query: 731 MNALKK 748 MNALKK Sbjct: 217 MNALKK 222
>AK104153:Os02g0652600 | Length = 234 Score = 122 bits (307), Expect = 3e-28 Identities = 57/113 (50%), Positives = 85/113 (75%) Frame = +2 Query: 395 RPDKTARHIMNILNKEAVDKVHSEREIPDVQPGCIIQMRLQVPENKRRESTLKGIVIARR 574 +P I+ ILNK+ +++ + +PD++PG II++R+Q P NKRR S KGI+IA+ Sbjct: 116 KPPVKFGEIIGILNKQFIEEAEKVKTLPDLRPGDIIELRMQRP-NKRRLSLFKGIIIAKH 174 Query: 575 NAGINTTFRLRRLVAGVGVESVFPLYSPNIKEMKILDRKKVRRAKLYYLRDRM 733 +G++TT R+RR++AGVGVE FP+YSP IKE+K++ KKVRRAKLYYL+ ++ Sbjct: 175 KSGVHTTIRVRRIIAGVGVEITFPIYSPRIKEIKVIRHKKVRRAKLYYLKHKL 227
>Os02g0524300:Os02g0524300 | Length = 345 Score = 99.8 bits (247), Expect = 3e-21 Identities = 68/156 (43%), Positives = 78/156 (50%), Gaps = 33/156 (21%) Frame = +2 Query: 380 RIKFKRPDKTARHI-----------------------------MNILNKEAVDKVHSERE 472 ++ KRPDKTA H ILN EA DKV ERE Sbjct: 219 KLALKRPDKTAMHARASIIESCNCKSRWLNAEVDERGEERDEKQAILNMEAADKVLGERE 278 Query: 473 IPDVQPGCIIQMRLQVPENKRRESTLKGIVIARRNAGINTTFRLRRLVAGVGVESVFPL- 649 IPDVQPGCI+QMRL A N+G+ + + S+F Sbjct: 279 IPDVQPGCILQMRL-----------------ADDNSGM------------LALPSLFAFC 309 Query: 650 ---YSPNIKEMKILDRKKVRRAKLYYLRDRMNALKK 748 YSPNIKE+K+LDRKKVRRAKLYYLRDRMNALKK Sbjct: 310 KSNYSPNIKEIKVLDRKKVRRAKLYYLRDRMNALKK 345
>AK067093:Os03g0775700 | Length = 943 Score = 37.4 bits (85), Expect = 0.018 Identities = 21/86 (24%), Positives = 38/86 (44%) Frame = -1 Query: 292 EKLCAETRRGRNNITGNEPIPGWRSEPASAEVFDGRGWRGSTRLSGYRSSKLQEPRRSPA 113 +KL + RR R + + P P R+ ++A V + S R + Q+P+++ Sbjct: 13 QKLLLDLRRRRERLGFDSPAPPQRTSSSNAAVLPR-----DSHSSSQRPHRSQKPQQAAP 67 Query: 112 ASGSADIPEQRLHPEDRTQVVGCSSP 35 +G A+ R HP+ + G P Sbjct: 68 RAGRAEATANRSHPQSGNAIAGAGKP 93
>AK067963:Os09g0128600 | Length = 322 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 3/48 (6%) Frame = -3 Query: 908 STLETKHEKYSKLWISNMGPNRCDS---QTATVVPSETMRVDPTEQKS 774 S+LE +K S+L++SN ++C+S + + + P M+ P+EQKS Sbjct: 113 SSLEVTEKKGSRLFLSNSNVSKCNSLNMEASCLNPWGWMKPRPSEQKS 160
>AK066410:Os09g0128600 | Length = 411 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 3/48 (6%) Frame = -3 Query: 908 STLETKHEKYSKLWISNMGPNRCDS---QTATVVPSETMRVDPTEQKS 774 S+LE +K S+L++SN ++C+S + + + P M+ P+EQKS Sbjct: 202 SSLEVTEKKGSRLFLSNSNVSKCNSLNMEASCLNPWGWMKPRPSEQKS 249
>AK061636:Os09g0128600 | Length = 308 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 3/48 (6%) Frame = -3 Query: 908 STLETKHEKYSKLWISNMGPNRCDS---QTATVVPSETMRVDPTEQKS 774 S+LE +K S+L++SN ++C+S + + + P M+ P+EQKS Sbjct: 99 SSLEVTEKKGSRLFLSNSNVSKCNSLNMEASCLNPWGWMKPRPSEQKS 146
>Os01g0660900:Os01g0660900 | Length = 292 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/35 (48%), Positives = 24/35 (68%) Frame = +3 Query: 309 RRWEVLRLPRTRTIPAPLRLSTPHASSSRGLTRLP 413 RR E+L L + ++P PL L P A+S+RGL R+P Sbjct: 33 RRRELLLL--SASLPLPLPLLAPAAASARGLFRMP 65
>AK110178: | Length = 914 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = -1 Query: 175 GSTRLSGYRSSKLQEPRRSPAASGSADIPEQRLHPEDRTQVVGCSSPAKGQDEEG 11 G+ LS + Q+P ++PA G IP+ + H + + G +S A+ D+EG Sbjct: 818 GNVNLSTGMKNGYQQPSQAPAPQG---IPQHQPHLQHQHAYPGMNSGAQDSDDEG 869
>AK103326:Os01g0111900 | Length = 212 Score = 29.6 bits (65), Expect = 3.7 Identities = 20/53 (37%), Positives = 22/53 (41%) Frame = +3 Query: 309 RRWEVLRLPRTRTIPAPLRLSTPHASSSRGLTRLPGTL*IS*TKRRLIRSTRR 467 RRW LR PR R R + R TR P T T+RR S RR Sbjct: 98 RRWPTLRRPRRRPTARRRRTEAEATTRRRATTRRPAT-----TRRRRGGSRRR 145
>Os02g0470400:Os02g0470400 | Length = 3088 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = -1 Query: 238 PIPGWRSEPASAEVFDGRGWRGSTRLSGYRSSKLQEPRRSP 116 P GW S PAS + D W ST+ Y S EPR P Sbjct: 1828 PTSGWGSNPASDQGCDVGPW--STKDGSYSSKAFFEPRLPP 1866
>AK107530:Os04g0415100 | Length = 327 Score = 29.3 bits (64), Expect = 4.9 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Frame = -1 Query: 277 ETRRGRNNITGNEPIPGWRSEPASAEVFDGRGWRGSTRLS------GYRSSKLQEPRRSP 116 +TRR RN P P W+++ A A RG R T G R +Q PRR+P Sbjct: 6 QTRR-RNASPEPSPPPLWKAQEAGAR----RGRRRRTPAGCCHGQEGARWYPVQAPRRAP 60 Query: 115 AASGSADI 92 + + AD+ Sbjct: 61 SRAADADV 68
>AK110145:Os09g0535200 | Length = 861 Score = 28.9 bits (63), Expect = 6.3 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +3 Query: 261 LPRLVSAQSFSWRGVCRRWEVLRLPRTRTIPAPLRLSTPHASSSRGLTRLP 413 +P + SFS+ GV + +P T P LRL PH + R T P Sbjct: 664 MPTTIGRYSFSYGGVSLSYA---MPCAPTAPLSLRLPAPHLRARRAPTSPP 711 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 32,082,541 Number of extensions: 763165 Number of successful extensions: 2494 Number of sequences better than 10.0: 14 Number of HSP's gapped: 2486 Number of HSP's successfully gapped: 14 Length of query: 351 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 249 Effective length of database: 11,315,673 Effective search space: 2817602577 Effective search space used: 2817602577 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
