ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf37g08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os03g0226800:Os03g0226800 30 1.1
2Os09g0293900:Os09g0293900 29 2.5
3Os04g0102500:Os04g0102500 29 2.5
4AK099045:Os09g0116600 29 2.5
5AK059180:Os09g0116600 29 2.5
6Os05g0501200:Os05g0501200 28 3.2
7Os01g0173000:Os01g0173000 28 4.2
8AK107588:Os02g0828400 28 4.2
9Os01g0817600:Os01g0817600 27 7.2
10Os01g0330200:Os01g0330200 27 7.2
11AK061124:Os12g0135800 27 7.2
12Os02g0465000:Os02g0465000 27 9.3

>Os03g0226800:Os03g0226800 |
          Length = 1761
 Score = 30.0 bits (66), Expect = 1.1
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = -1

Query: 131  RRRMAD------LDGAGCHLDFGAPHVGTRGTPPEQTATARPAAGAPKP 3
            RR M D       DG G     GA    + G+PP  T+++ P++ +P P
Sbjct: 1104 RREMDDSPLDNLFDGNGLDSSAGADSSSSTGSPPSSTSSSPPSSQSPPP 1152



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>Os09g0293900:Os09g0293900 |
          Length = 515

 Score = 28.9 bits (63), Expect = 2.5
 Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 13/69 (18%)
 Frame = -2

Query: 244 LPRRHPHP**VEAPQPVDDQPSMA-----------SVPFSRLDGALSSGVGGWRIW--ME 104
           LP RH HP    A    +  PS A           S+PF   DG L  G  GW       
Sbjct: 46  LPPRHHHPPPPPAEGASEPPPSTAAASVALRVRSPSLPFRIADGVLGCGGEGWEALHPPP 105

Query: 103 RAVIWTSEH 77
           R++ W   H
Sbjct: 106 RSLTWPPPH 114



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>Os04g0102500:Os04g0102500 |
          Length = 281

 Score = 28.9 bits (63), Expect = 2.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 376 PPSSGLSPRHKCTSLFLNTRWVYVSPST 459
           PP++ + P H+C +++L T   Y  P+T
Sbjct: 60  PPTTAMYPLHRCKTIYLVTTSSYAFPNT 87



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>AK099045:Os09g0116600 |
          Length = 114

 Score = 28.9 bits (63), Expect = 2.5
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +3

Query: 123 PPTPEERAPSSLEKGTEAMLG---*SSTGCGASTHHG*GWRR 239
           PP P ER   SL +G E   G    +  G  AS H G  WRR
Sbjct: 58  PPPPHERGEDSLHRG-EGWRGVGCCAGRGSRASRHEGRDWRR 98



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>AK059180:Os09g0116600 |
          Length = 121

 Score = 28.9 bits (63), Expect = 2.5
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +3

Query: 123 PPTPEERAPSSLEKGTEAMLG---*SSTGCGASTHHG*GWRR 239
           PP P ER   SL +G E   G    +  G  AS H G  WRR
Sbjct: 58  PPPPHERGEDSLHRG-EGWRGVGCCAGRGSRASRHEGRDWRR 98



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>Os05g0501200:Os05g0501200 |
          Length = 323

 Score = 28.5 bits (62), Expect = 3.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 95  HLDFGAPHVGTRGTPPEQTATARPAAGAPKP 3
           H D G+P   TR +P    A  +P   AP P
Sbjct: 175 HQDAGSPSPATRSSPGSPAAAKKPRIEAPSP 205



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>Os01g0173000:Os01g0173000 |
          Length = 194

 Score = 28.1 bits (61), Expect = 4.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -1

Query: 104 AGCHLDFGAPHVGTRGTPPEQTATARPAAGAPKP 3
           A C+    AP +  R  PP Q    R A G P+P
Sbjct: 6   ACCYRPLSAPPLHRRRGPPPQQQQLRTAVGGPRP 39



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>AK107588:Os02g0828400 |
          Length = 192

 Score = 28.1 bits (61), Expect = 4.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 128 RRMADLDGAGCHLDFGAPHVGTRGTPPEQTATARPAAGAP 9
           +R +   GA      G    G+   PP +T TARP  G+P
Sbjct: 72  KRESGSGGAEAAAGAGEAAAGSGPRPPRRTTTARPRQGSP 111



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>Os01g0817600:Os01g0817600 |
          Length = 333

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +3

Query: 81  SEVQMTARSIQIRHPPTPEERAPSSLEKGTEAMLG*SSTGCGASTHHG 224
           +++  ++ S + RH P P  RAP        A +G     CG    HG
Sbjct: 4   TKIPKSSFSARARHWPPPPHRAPWLRAAAGRAAVGERMGACGERRRHG 51



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>Os01g0330200:Os01g0330200 |
          Length = 357

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -2

Query: 241 PRRHPHP**VEAPQPVD 191
           P  HPHP   EAP+PVD
Sbjct: 113 PATHPHPHPEEAPRPVD 129



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>AK061124:Os12g0135800 |
          Length = 374

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = +3

Query: 123 PPTPEERAPSSLEKGTEAMLG*SSTGCGAS---THH 221
           P  PE R P++++ G  A+L      CG S    HH
Sbjct: 150 PLAPEHRLPAAIDAGHAALLWLRDVACGTSDTIAHH 185



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>Os02g0465000:Os02g0465000 |
          Length = 1468

 Score = 26.9 bits (58), Expect = 9.3
 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
 Frame = +3

Query: 108  IQIRHPPTPEERAPSSLEK---GTEAMLG*SSTGCGASTHH 221
            IQIR  P P    PS+  K   G EA    S  G  AS  H
Sbjct: 1144 IQIRTLPNPSRHQPSAASKRRCGGEAAAAASGCGVAASPEH 1184


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 18,353,384
Number of extensions: 464119
Number of successful extensions: 1280
Number of sequences better than 10.0: 12
Number of HSP's gapped: 1278
Number of HSP's successfully gapped: 12
Length of query: 189
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 94
Effective length of database: 11,595,960
Effective search space: 1090020240
Effective search space used: 1090020240
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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