| Clone Name | FLbaf37g08 |
|---|---|
| Clone Library Name | barley_pub |
>P18431:SGG_DROME Protein kinase shaggy - Drosophila melanogaster (Fruit fly)| Length = 1067 Score = 33.5 bits (75), Expect = 0.54 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 4/119 (3%) Frame = +1 Query: 187 DRLQVVE--PLLIMDEDGDGAKFQKAILGSRAFMVILQPGMVTDFRNPPLEGKRKYKTCG 360 DR+Q V ++ G FQ + + + I + F+N L+ RK + C Sbjct: 600 DRVQEVSYTDTKVIGNGSFGVVFQAKLCDTGELVAIKKVLQDRRFKNRELQIMRKLEHCN 659 Query: 361 QLKL--FPPSSGLSPRHKCTSLFLNTRWVYVSPSTFCWGLYRSKSEKTISLSWLDLYFY 531 +KL F SSG K +FLN Y+ + + +K+++TI ++++ LY Y Sbjct: 660 IVKLLYFFYSSG----EKRDEVFLNLVLEYIPETVYKVARQYAKTKQTIPINFIRLYMY 714
>Q5NDE8:AGO61_CHICK Uncharacterized glycosyltransferase AGO61 precursor - Gallus gallus| (Chicken) Length = 577 Score = 32.0 bits (71), Expect = 1.6 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = -3 Query: 489 TFASVQPPTKCRRGNVYPSRIKKERCTLMSGAQSRARRKKLQLPASLVFPFSLQ-RRVSE 313 T S P K G++YP +++ RC S AR L S P++L+ +V E Sbjct: 462 TVKSKPGPKKKWSGSLYPGKVRDARCQASVQGTSEAR-----LSVSWQVPWNLKYLKVRE 516 Query: 312 ICHHAWLQNDHE 277 + + W+Q E Sbjct: 517 VKYEVWIQEQGE 528
>P49840:GSK3A_HUMAN Glycogen synthase kinase-3 alpha - Homo sapiens (Human)| Length = 483 Score = 31.2 bits (69), Expect = 2.7 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Frame = +1 Query: 238 GAKFQKAILGSRAFMVILQPGMVTDFRNPPLEGKRKYKTCG--QLKLFPPSSGLSPRHKC 411 G +Q + +R + I + F+N L+ RK C +L+ F SSG K Sbjct: 131 GVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG----EKK 186 Query: 412 TSLFLNTRWVYVSPSTFCWGLYRSKSEKTISLSWLDLYFY 531 L+LN YV + + + +K++ TI + ++ +Y Y Sbjct: 187 DELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMY 226
>P12774:NU3M_PARLI NADH-ubiquinone oxidoreductase chain 3 - Paracentrotus lividus| (Common sea urchin) Length = 117 Score = 30.4 bits (67), Expect = 4.5 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = +1 Query: 259 ILGSRAFMVILQPGMVTDFRNPPLE 333 IL S AFM IL G+V ++ NPPLE Sbjct: 90 ILISLAFMAILDAGLVFEWINPPLE 114
>P35125:UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 - Homo sapiens (Human)| Length = 1406 Score = 30.0 bits (66), Expect = 5.9 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 5/97 (5%) Frame = +3 Query: 84 EVQMTARSIQIRHPPTPEERAPSSLEKGTEAMLG*SSTGCGAST-----HHG*GWRRGKI 248 E+ TA S +I P E+ + L SS C ++T + G ++ Sbjct: 510 EMSFTANSSKIDRQKVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYEL 569 Query: 249 SKSHPRVQGLHGHFAARHGDRFQKPASGGKKEIQDLR 359 ++++P G+ GH A +GD Q+ SG +K + L+ Sbjct: 570 NRTNPI--GMKGHMAKCYGDLVQELWSGTQKSVAPLK 604
>P18266:GSK3B_RAT Glycogen synthase kinase-3 beta - Rattus norvegicus (Rat)| Length = 420 Score = 30.0 bits (66), Expect = 5.9 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Frame = +1 Query: 238 GAKFQKAILGSRAFMVILQPGMVTDFRNPPLEGKRKYKTCG--QLKLFPPSSGLSPRHKC 411 G +Q + S + I + F+N L+ RK C +L+ F SSG K Sbjct: 68 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG----EKK 123 Query: 412 TSLFLNTRWVYVSPSTFCWGLYRSKSEKTISLSWLDLYFY 531 ++LN YV + + + S++++T+ + ++ LY Y Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
>Q9WV60:GSK3B_MOUSE Glycogen synthase kinase-3 beta - Mus musculus (Mouse)| Length = 420 Score = 30.0 bits (66), Expect = 5.9 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Frame = +1 Query: 238 GAKFQKAILGSRAFMVILQPGMVTDFRNPPLEGKRKYKTCG--QLKLFPPSSGLSPRHKC 411 G +Q + S + I + F+N L+ RK C +L+ F SSG K Sbjct: 68 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG----EKK 123 Query: 412 TSLFLNTRWVYVSPSTFCWGLYRSKSEKTISLSWLDLYFY 531 ++LN YV + + + S++++T+ + ++ LY Y Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
>P49841:GSK3B_HUMAN Glycogen synthase kinase-3 beta - Homo sapiens (Human)| Length = 420 Score = 30.0 bits (66), Expect = 5.9 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Frame = +1 Query: 238 GAKFQKAILGSRAFMVILQPGMVTDFRNPPLEGKRKYKTCG--QLKLFPPSSGLSPRHKC 411 G +Q + S + I + F+N L+ RK C +L+ F SSG K Sbjct: 68 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG----EKK 123 Query: 412 TSLFLNTRWVYVSPSTFCWGLYRSKSEKTISLSWLDLYFY 531 ++LN YV + + + S++++T+ + ++ LY Y Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
>Q09200:B4GN1_MOUSE Beta-1,4 N-acetylgalactosaminyltransferase 1 - Mus musculus (Mouse)| Length = 533 Score = 29.6 bits (65), Expect = 7.7 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 99 ARSIQIRHPPTPEERAPSSLEKGTE 173 A +I +RHPP P PSSL +G E Sbjct: 248 AFTILVRHPPNPRLYPPSSLPQGAE 272 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 107,932,164 Number of extensions: 2531537 Number of successful extensions: 6284 Number of sequences better than 10.0: 9 Number of HSP's gapped: 6280 Number of HSP's successfully gapped: 9 Length of query: 189 Length of database: 100,686,439 Length adjustment: 107 Effective length of query: 82 Effective length of database: 71,336,874 Effective search space: 5849623668 Effective search space used: 5849623668 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)