ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf37g08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P18431:SGG_DROME Protein kinase shaggy - Drosophila melanogaster... 33 0.54
2Q5NDE8:AGO61_CHICK Uncharacterized glycosyltransferase AGO61 pre... 32 1.6
3P49840:GSK3A_HUMAN Glycogen synthase kinase-3 alpha - Homo sapie... 31 2.7
4P12774:NU3M_PARLI NADH-ubiquinone oxidoreductase chain 3 - Parac... 30 4.5
5P35125:UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 - Homo... 30 5.9
6P18266:GSK3B_RAT Glycogen synthase kinase-3 beta - Rattus norveg... 30 5.9
7Q9WV60:GSK3B_MOUSE Glycogen synthase kinase-3 beta - Mus musculu... 30 5.9
8P49841:GSK3B_HUMAN Glycogen synthase kinase-3 beta - Homo sapien... 30 5.9
9Q09200:B4GN1_MOUSE Beta-1,4 N-acetylgalactosaminyltransferase 1 ... 30 7.7

>P18431:SGG_DROME Protein kinase shaggy - Drosophila melanogaster (Fruit fly)|
          Length = 1067
 Score = 33.5 bits (75), Expect = 0.54
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
 Frame = +1

Query: 187 DRLQVVE--PLLIMDEDGDGAKFQKAILGSRAFMVILQPGMVTDFRNPPLEGKRKYKTCG 360
           DR+Q V      ++     G  FQ  +  +   + I +      F+N  L+  RK + C 
Sbjct: 600 DRVQEVSYTDTKVIGNGSFGVVFQAKLCDTGELVAIKKVLQDRRFKNRELQIMRKLEHCN 659

Query: 361 QLKL--FPPSSGLSPRHKCTSLFLNTRWVYVSPSTFCWGLYRSKSEKTISLSWLDLYFY 531
            +KL  F  SSG     K   +FLN    Y+  + +      +K+++TI ++++ LY Y
Sbjct: 660 IVKLLYFFYSSG----EKRDEVFLNLVLEYIPETVYKVARQYAKTKQTIPINFIRLYMY 714



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>Q5NDE8:AGO61_CHICK Uncharacterized glycosyltransferase AGO61 precursor - Gallus gallus|
           (Chicken)
          Length = 577

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -3

Query: 489 TFASVQPPTKCRRGNVYPSRIKKERCTLMSGAQSRARRKKLQLPASLVFPFSLQ-RRVSE 313
           T  S   P K   G++YP +++  RC       S AR     L  S   P++L+  +V E
Sbjct: 462 TVKSKPGPKKKWSGSLYPGKVRDARCQASVQGTSEAR-----LSVSWQVPWNLKYLKVRE 516

Query: 312 ICHHAWLQNDHE 277
           + +  W+Q   E
Sbjct: 517 VKYEVWIQEQGE 528



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>P49840:GSK3A_HUMAN Glycogen synthase kinase-3 alpha - Homo sapiens (Human)|
          Length = 483

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 238 GAKFQKAILGSRAFMVILQPGMVTDFRNPPLEGKRKYKTCG--QLKLFPPSSGLSPRHKC 411
           G  +Q  +  +R  + I +      F+N  L+  RK   C   +L+ F  SSG     K 
Sbjct: 131 GVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG----EKK 186

Query: 412 TSLFLNTRWVYVSPSTFCWGLYRSKSEKTISLSWLDLYFY 531
             L+LN    YV  + +    + +K++ TI + ++ +Y Y
Sbjct: 187 DELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMY 226



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>P12774:NU3M_PARLI NADH-ubiquinone oxidoreductase chain 3 - Paracentrotus lividus|
           (Common sea urchin)
          Length = 117

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = +1

Query: 259 ILGSRAFMVILQPGMVTDFRNPPLE 333
           IL S AFM IL  G+V ++ NPPLE
Sbjct: 90  ILISLAFMAILDAGLVFEWINPPLE 114



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>P35125:UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 - Homo sapiens (Human)|
          Length = 1406

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
 Frame = +3

Query: 84  EVQMTARSIQIRHPPTPEERAPSSLEKGTEAMLG*SSTGCGAST-----HHG*GWRRGKI 248
           E+  TA S +I     P E+  + L          SS  C ++T     +   G    ++
Sbjct: 510 EMSFTANSSKIDRQKVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYEL 569

Query: 249 SKSHPRVQGLHGHFAARHGDRFQKPASGGKKEIQDLR 359
           ++++P   G+ GH A  +GD  Q+  SG +K +  L+
Sbjct: 570 NRTNPI--GMKGHMAKCYGDLVQELWSGTQKSVAPLK 604



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>P18266:GSK3B_RAT Glycogen synthase kinase-3 beta - Rattus norvegicus (Rat)|
          Length = 420

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 238 GAKFQKAILGSRAFMVILQPGMVTDFRNPPLEGKRKYKTCG--QLKLFPPSSGLSPRHKC 411
           G  +Q  +  S   + I +      F+N  L+  RK   C   +L+ F  SSG     K 
Sbjct: 68  GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG----EKK 123

Query: 412 TSLFLNTRWVYVSPSTFCWGLYRSKSEKTISLSWLDLYFY 531
             ++LN    YV  + +    + S++++T+ + ++ LY Y
Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163



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>Q9WV60:GSK3B_MOUSE Glycogen synthase kinase-3 beta - Mus musculus (Mouse)|
          Length = 420

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 238 GAKFQKAILGSRAFMVILQPGMVTDFRNPPLEGKRKYKTCG--QLKLFPPSSGLSPRHKC 411
           G  +Q  +  S   + I +      F+N  L+  RK   C   +L+ F  SSG     K 
Sbjct: 68  GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG----EKK 123

Query: 412 TSLFLNTRWVYVSPSTFCWGLYRSKSEKTISLSWLDLYFY 531
             ++LN    YV  + +    + S++++T+ + ++ LY Y
Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163



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>P49841:GSK3B_HUMAN Glycogen synthase kinase-3 beta - Homo sapiens (Human)|
          Length = 420

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 238 GAKFQKAILGSRAFMVILQPGMVTDFRNPPLEGKRKYKTCG--QLKLFPPSSGLSPRHKC 411
           G  +Q  +  S   + I +      F+N  L+  RK   C   +L+ F  SSG     K 
Sbjct: 68  GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG----EKK 123

Query: 412 TSLFLNTRWVYVSPSTFCWGLYRSKSEKTISLSWLDLYFY 531
             ++LN    YV  + +    + S++++T+ + ++ LY Y
Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163



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>Q09200:B4GN1_MOUSE Beta-1,4 N-acetylgalactosaminyltransferase 1 - Mus musculus (Mouse)|
          Length = 533

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 99  ARSIQIRHPPTPEERAPSSLEKGTE 173
           A +I +RHPP P    PSSL +G E
Sbjct: 248 AFTILVRHPPNPRLYPPSSLPQGAE 272


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 107,932,164
Number of extensions: 2531537
Number of successful extensions: 6284
Number of sequences better than 10.0: 9
Number of HSP's gapped: 6280
Number of HSP's successfully gapped: 9
Length of query: 189
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 82
Effective length of database: 71,336,874
Effective search space: 5849623668
Effective search space used: 5849623668
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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