ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf40h05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK071645:Os10g0444100 | 32 | 1.6 | 2 | AK107125:Os12g0168100 | 27 | 3.7 | 3 | AK073768:Os11g0636900 | 31 | 4.7 | 4 | AK067704:Os01g0111400 | 31 | 4.7 | 5 | AK066455:Os01g0111400 | 31 | 4.7 | 6 | AK059255:Os11g0636900 | 31 | 4.7 | 7 | Os12g0428200:Os12g0428200 | 30 | 6.2 | 8 | Os06g0645600:Os06g0645600 | 30 | 6.2 | 9 | Os02g0694100:Os02g0694100 | 30 | 6.2 | 10 | AK112035:Os08g0357000 | 30 | 6.2 | 11 | AK106138:Os10g0577200 | 30 | 6.2 | 12 | AK069022:Os07g0582800 | 28 | 6.8 | 13 | Os03g0691700:Os03g0691700 | 30 | 8.1 | 14 | AK110285: | 30 | 8.1 | 15 | AK109895:Os10g0566400 | 30 | 8.1 |
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>AK071645:Os10g0444100 | Length = 274 Score = 32.3 bits (72), Expect = 1.6 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Frame = +3 Query: 378 MDHDAVVVVAWIIELEDGRPQWQR---RTRVPAMDRSTGALDLASRSPDLATL-SPDLLP 545 M+ W LE+G P+W+ PA+ + G RSP +T+ PDLL Sbjct: 1 MEKAVAAACGWRKGLEEGEPEWEAMELEAAAPAIFPADGGGGGVRRSPAASTIFLPDLLD 60 Query: 546 SRFLS 560 FLS Sbjct: 61 GSFLS 65
>AK107125:Os12g0168100 | Length = 341 Score = 26.6 bits (57), Expect(2) = 3.7 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 319 GGARSIHWSAKQTCRRWRSAW 381 GG R W ++ CRRWR +W Sbjct: 48 GGGRRRRW--RRWCRRWRVSW 66 Score = 23.1 bits (48), Expect(2) = 3.7 Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%) Frame = +3 Query: 279 PPATKS-WRRRRLRGW 323 P AT++ WRRRR R W Sbjct: 26 PAATRARWRRRRRRCW 41
>AK073768:Os11g0636900 | Length = 574 Score = 30.8 bits (68), Expect = 4.7 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Frame = +1 Query: 25 HDSPRRRHQRRSIQATYRWESTVPRKPQGSPRSATPSYQGRSSMRV--LQRYPRLSLVAR 198 HDS RRR + R +R S P K G R + + RSS RV + P+ ++ A Sbjct: 131 HDSERRRDRDRDGHRRHRSRSRSPSK--GRDRRSRSRSRSRSSKRVSGFDQGPQAAIPA- 187 Query: 199 VSAGVAPVTQDAILAEASG 255 ++AG AP + SG Sbjct: 188 LAAGAAPGQVPVVAPAISG 206
>AK067704:Os01g0111400 | Length = 745 Score = 30.8 bits (68), Expect = 4.7 Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 1/99 (1%) Frame = +1 Query: 1 GSSPISFLHDSPRRRHQRRSIQATYRWESTVPRKPQGSPRSATPSYQGRSSMRVLQRYPR 180 G SF + R+R + I A + P A ++G SS RYPR Sbjct: 606 GGDAFSFAEEIVRKRRRVSMITAADELSQYLAEPPAPISTDALEWWKGHSS-----RYPR 660 Query: 181 LSLVARVSAGVAPVTQD-AILAEASGRHGREGIYPLPRS 294 LSL+AR + + D L + G R+ Y LP S Sbjct: 661 LSLMARDFLAIQGTSLDPEELFTSKGDSMRKQHYCLPLS 699
>AK066455:Os01g0111400 | Length = 701 Score = 30.8 bits (68), Expect = 4.7 Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 1/99 (1%) Frame = +1 Query: 1 GSSPISFLHDSPRRRHQRRSIQATYRWESTVPRKPQGSPRSATPSYQGRSSMRVLQRYPR 180 G SF + R+R + I A + P A ++G SS RYPR Sbjct: 562 GGDAFSFAEEIVRKRRRVSMITAADELSQYLAEPPAPISTDALEWWKGHSS-----RYPR 616 Query: 181 LSLVARVSAGVAPVTQD-AILAEASGRHGREGIYPLPRS 294 LSL+AR + + D L + G R+ Y LP S Sbjct: 617 LSLMARDFLAIQGTSLDPEELFTSKGDSMRKQHYCLPLS 655
>AK059255:Os11g0636900 | Length = 550 Score = 30.8 bits (68), Expect = 4.7 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Frame = +1 Query: 25 HDSPRRRHQRRSIQATYRWESTVPRKPQGSPRSATPSYQGRSSMRV--LQRYPRLSLVAR 198 HDS RRR + R +R S P K G R + + RSS RV + P+ ++ A Sbjct: 131 HDSERRRDRDRDGHRRHRSRSRSPSK--GRDRRSRSRSRSRSSKRVSGFDQGPQAAIPA- 187 Query: 199 VSAGVAPVTQDAILAEASG 255 ++AG AP + SG Sbjct: 188 LAAGAAPGQVPVVAPAISG 206
>Os12g0428200:Os12g0428200 | Length = 694 Score = 30.4 bits (67), Expect = 6.2 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 6/41 (14%) Frame = +2 Query: 302 TPPASRVEPEASTGARNRRAGGGD------PHGSRRGRRSG 406 TPPA R+ P A + A A P G+RR RRSG Sbjct: 108 TPPAGRILPSALSAAERSSAAASSTESQTRPTGARRERRSG 148
>Os06g0645600:Os06g0645600 | Length = 583 Score = 30.4 bits (67), Expect = 6.2 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = -1 Query: 2276 GSIYFFG--NIIITHYKKIDRRMPQCTTILNPASMFMSMPSSHSAVGSSKLNQTG 2118 G Y+ G NI HY + R P C+T+L PA M PSS + + +++ G Sbjct: 56 GLRYYTGGWNISDKHYLALAMRSPWCSTVL-PAWFLMLTPSSFAMLVAARAQSVG 109
>Os02g0694100:Os02g0694100 | Length = 828 Score = 30.4 bits (67), Expect = 6.2 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 2/85 (2%) Frame = +1 Query: 25 HDSPRRRHQRRSIQATYRWESTVPRKPQGSP--RSATPSYQGRSSMRVLQRYPRLSLVAR 198 HDS R + S + T+ E P P SA+ QGRSS + + + LV Sbjct: 201 HDS--RHGKACSERQTHHAEPKNPTARTAPPPLHSASRGTQGRSSQKPIYSFTTHLLVHA 258 Query: 199 VSAGVAPVTQDAILAEASGRHGREG 273 + G +LAE+S RHG +G Sbjct: 259 TARGTV------LLAESSPRHGGDG 277
>AK112035:Os08g0357000 | Length = 314 Score = 30.4 bits (67), Expect = 6.2 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +2 Query: 14 SLSCTTLLAAATNGARSRR---PTGGNRRCQENRRDPLAPLLPPIR 142 SL + +A RSR PT +RR + RR P PLLPP R Sbjct: 2 SLQFSPHRSAQPEPGRSREDHIPTPYSRRARRRRRQPPPPLLPPCR 47
>AK106138:Os10g0577200 | Length = 348 Score = 30.4 bits (67), Expect = 6.2 Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Frame = +3 Query: 39 PPPPTALDPGDLPVGIDGAKKTAGIPSLRYSLLSGEIQHARP--PTLPA 179 PPPP PG LP + P Y LLS QH P P PA Sbjct: 252 PPPPPVPSPGILPSPSGFLNLLSPTPRSPYPLLSPGFQHPGPLTPNFPA 300
>AK069022:Os07g0582800 | Length = 155 Score = 28.5 bits (62), Expect(2) = 6.8 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Frame = +2 Query: 341 GARNRRAGGGDPHGSRRGRR---SGLDH*ARGWTASVA 445 G R + GGD G+RR R + L H GW+ +VA Sbjct: 101 GRRGESSRGGDRRGARRARHGAAASLPHWEVGWSEAVA 138 Score = 20.4 bits (41), Expect(2) = 6.8 Identities = 9/17 (52%), Positives = 9/17 (52%) Frame = +3 Query: 300 RRRRLRGWSPKHPLERE 350 RRRR R W P RE Sbjct: 49 RRRRRRLWRLARPARRE 65
>Os03g0691700:Os03g0691700 | Length = 279 Score = 30.0 bits (66), Expect = 8.1 Identities = 41/160 (25%), Positives = 60/160 (37%), Gaps = 28/160 (17%) Frame = +2 Query: 8 PPSLSCTTLLAAATNGARSRRPTGGNRRCQENRRDPLAPLLPPIRGDPACASSNATRDFL 187 PP+ S L T+GA + RP GG R R P ASS A R Sbjct: 45 PPAASSCALCTRRTDGAAALRPAGGQGR---RARRP--------------ASSCALRARR 87 Query: 188 LLLGFRPAWLR*LRTPSLLK--HQDAMDGKA-----------STPCHEVMET------PP 310 +++G W R TP+ ++ + DG+ ++ EV +T PP Sbjct: 88 IIIGGATGWRRCCWTPAAVETNTRKLADGRVALRRSYSSRMWASSSSEVTDTSRSSSRPP 147 Query: 311 ASR-------VEPEASTGARNRRAGG--GDPHGSRRGRRS 403 ++R P A + +R G P G+ R R S Sbjct: 148 SARRYLTAVTASPPAPAFSASRAVSSRKGAPRGTARARVS 187
>AK110285: | Length = 585 Score = 30.0 bits (66), Expect = 8.1 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%) Frame = -3 Query: 378 CGS--PPPARLFRAPVDASGSTLEAGGVSMTSWQGVDAF 268 CG PP RLF GS L S T W V+AF Sbjct: 136 CGGLLAPPTRLFERRNSTDGSVLHESKASRTLWDTVEAF 174
>AK109895:Os10g0566400 | Length = 438 Score = 30.0 bits (66), Expect = 8.1 Identities = 34/121 (28%), Positives = 40/121 (33%), Gaps = 3/121 (2%) Frame = +2 Query: 53 GARSRRPTGGNRRCQENRRDPLAPLLPPIRGDPACASSNATRDFLLLLGFRPAWLR*LRT 232 GAR R RRC +NR R PA A+ G AW + Sbjct: 269 GARGRHQATRRRRCAKNR-----------RAKPASAAG----------GAGGAWAAVVGD 307 Query: 233 PSLLKHQDAMDGKASTPCHEVMETPPASRVEPEASTGARNRRAGGGDPHGS---RRGRRS 403 P + + G + ME P VE A RR G G HG GRR Sbjct: 308 PDGVVQLGEVAGAVEQQVEQQMEQP----VEQRAVEQPVRRRHGDGGRHGGVVVGHGRRR 363 Query: 404 G 406 G Sbjct: 364 G 364 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 71,301,223 Number of extensions: 1628620 Number of successful extensions: 5748 Number of sequences better than 10.0: 15 Number of HSP's gapped: 5726 Number of HSP's successfully gapped: 17 Length of query: 831 Length of database: 15,399,855 Length adjustment: 109 Effective length of query: 722 Effective length of database: 11,035,386 Effective search space: 7967548692 Effective search space used: 7967548692 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
