| Clone Name | FLbaf40h05 |
|---|---|
| Clone Library Name | barley_pub |
>Q32440:NU5C_HORVU NAD(P)H-quinone oxidoreductase chain 5, chloroplast - Hordeum| vulgare (Barley) Length = 739 Score = 34.7 bits (78), Expect = 2.0 Identities = 23/71 (32%), Positives = 35/71 (49%) Frame = +1 Query: 607 TELMGSGAQIVFNLWIQFTKYGRTSVYQYFVSFLQILSYVIKFPIHASPKKEFPDPCRLL 786 T + S +F L+I + YG S Y +F + I S+V + +PKKEF D + Sbjct: 603 TNAISSVTLAIFGLFIAYIFYG--SAYSFFQNLDLINSFVKR-----NPKKEFLDQVKKN 655 Query: 787 FYEFYYNVTYV 819 Y + YN Y+ Sbjct: 656 IYSWSYNRGYI 666
>O00459:P85B_HUMAN Phosphatidylinositol 3-kinase regulatory subunit beta - Homo| sapiens (Human) Length = 728 Score = 33.1 bits (74), Expect = 5.7 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = +3 Query: 21 PARLSSPPPPTALDPGDLPVGIDGAKKTAGIPSLRYSLLSG---EIQHARPPTLP 176 P L +PPPP++ PG P DG++ + P+L L E Q PP LP Sbjct: 252 PLLLRAPPPPSSPPPGGAP---DGSEPSPDFPALLVEKLLQEHLEEQEVAPPALP 303
>Q08727:HXA2_CHICK Homeobox protein Hox-A2 - Gallus gallus (Chicken)| Length = 375 Score = 33.1 bits (74), Expect = 5.7 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +2 Query: 269 KASTPCHEVMETPPASRVEPEASTGARNRRAGGGDPHGSRRGR 397 K ST H + PP + P + G R +GGG P S R R Sbjct: 38 KNSTLSHSTLIPPPFEQTIPSLNPGGHPRHSGGGRPKASPRAR 80
>P22086:ADA2C_RAT Alpha-2C adrenergic receptor - Rattus norvegicus (Rat)| Length = 458 Score = 33.1 bits (74), Expect = 5.7 Identities = 22/57 (38%), Positives = 25/57 (43%) Frame = +2 Query: 305 PPASRVEPEASTGARNRRAGGGDPHGSRRGRRSGLDH*ARGWTASVAEAHTSSCDGP 475 PP + VEP+ S+ A RR G G R RR G AE T S DGP Sbjct: 276 PPRTEVEPDESSAAERRRRRGALRRGGR--RREG------------AEGDTGSADGP 318
>Q01337:ADA2C_MOUSE Alpha-2C adrenergic receptor - Mus musculus (Mouse)| Length = 458 Score = 33.1 bits (74), Expect = 5.7 Identities = 22/57 (38%), Positives = 25/57 (43%) Frame = +2 Query: 305 PPASRVEPEASTGARNRRAGGGDPHGSRRGRRSGLDH*ARGWTASVAEAHTSSCDGP 475 PP + VEP+ S+ A RR G G R RR G AE T S DGP Sbjct: 276 PPRTEVEPDESSAAERRRRRGALRRGGR--RREG------------AEGDTGSADGP 318
>Q96Q82:TIGA1_HUMAN Putative uncharacterized protein TIGA1 - Homo sapiens (Human)| Length = 120 Score = 32.7 bits (73), Expect = 7.4 Identities = 30/112 (26%), Positives = 45/112 (40%) Frame = +1 Query: 385 TTRSS*WPGSLSSRMDGLSGRGAHEFLRWTDPQGRWIWPRDRLI*PLYRQISSLLGFSLT 564 T R + W GSLS G S FL W G W+WPR L R+ + G + T Sbjct: 17 TCRKALWDGSLSFLPFGAS---LLWFLLWVLWDGAWLWPRG-----LSRR-GAGRGNAAT 67 Query: 565 LPFFLSTRSLIGACTELMGSGAQIVFNLWIQFTKYGRTSVYQYFVSFLQILS 720 L R + + + G+ + L K G +S+ Y + + + S Sbjct: 68 LSLVSRLRRPVSEVSGAVNKGSGLASGLRSHVWKRGASSICVYIIDYAREFS 119
>Q95H46:NU5C_WHEAT NAD(P)H-quinone oxidoreductase chain 5, chloroplast - Triticum| aestivum (Wheat) Length = 739 Score = 32.7 bits (73), Expect = 7.4 Identities = 22/71 (30%), Positives = 33/71 (46%) Frame = +1 Query: 607 TELMGSGAQIVFNLWIQFTKYGRTSVYQYFVSFLQILSYVIKFPIHASPKKEFPDPCRLL 786 T + S +F L+I + YG S Y +F + I S+ +PKKEF D + Sbjct: 603 TNAISSVTLAIFGLFIAYIFYG--SAYSFFQNLDLINSFY-----KGNPKKEFLDQVKKN 655 Query: 787 FYEFYYNVTYV 819 Y + YN Y+ Sbjct: 656 IYSWSYNRGYI 666
>Q7RX84:CWC22_NEUCR Pre-mRNA-splicing factor cwc-22 - Neurospora crassa| Length = 1010 Score = 32.7 bits (73), Expect = 7.4 Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Frame = +1 Query: 31 SPRRRHQRRSIQATYRWESTVPRKPQGSPRSATPSYQGRSSMRVLQR-YPRLSLVARV-- 201 SP R + RS R S R SP +A P +GRS R R Y R Sbjct: 800 SPPPRGRGRSYDRYSRSPSR-SRSRTRSPAAAPPIRRGRSGTRSRSRSYSRSPSPPPARG 858 Query: 202 --SAGVAPVTQDAILAEASGRHGREGIYPLPRS 294 + G APV+ + A ASG+ REG Y RS Sbjct: 859 YPTRGRAPVSNNDRAAAASGKRRREGSYSASRS 891
>P33485:VNUA_PRVKA Probable nuclear antigen - Pseudorabies virus (strain Kaplan) (PRV)| Length = 1733 Score = 32.3 bits (72), Expect = 9.7 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = +2 Query: 305 PPASRVEPEASTGARNRRAGGGDPHGSRRGRRSGLDH*ARGWTASVAEA 451 PP +P + G+ RR GG P G RR G A G A+ A+A Sbjct: 289 PPPPPPQPPPAGGSARRRRRGGGPPGRGGRRRGGKRRRAEGTEAAAADA 337 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 437,790,813 Number of extensions: 9673867 Number of successful extensions: 25117 Number of sequences better than 10.0: 9 Number of HSP's gapped: 25083 Number of HSP's successfully gapped: 9 Length of query: 831 Length of database: 100,686,439 Length adjustment: 122 Effective length of query: 709 Effective length of database: 67,222,449 Effective search space: 47660716341 Effective search space used: 47660716341 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)