| Clone Name | FLbaf37d14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK065373:Os05g0292200 | 576 | e-164 | 2 | AK059340:Os02g0147700 | 32 | 0.96 | 3 | AK059092:Os06g0208300 | 32 | 0.96 | 4 | AY224424:Os08g0557400 | 32 | 0.96 | 5 | AK060067:Os08g0557400 | 32 | 0.96 | 6 | AK121343:Os07g0619800 | 32 | 1.6 | 7 | Os04g0419500:Os04g0419500 | 31 | 2.1 | 8 | AK065729:Os10g0550000 | 31 | 2.1 | 9 | AK110205: | 30 | 4.8 | 10 | AK122091:Os05g0560600 | 30 | 4.8 | 11 | AK067862:Os05g0560600 | 30 | 4.8 | 12 | AK108076:Os08g0465300 | 29 | 8.2 |
|---|
>AK065373:Os05g0292200 | Length = 394 Score = 576 bits (1484), Expect = e-164 Identities = 288/402 (71%), Positives = 309/402 (76%) Frame = +2 Query: 101 MASGNVSTVYISVIDDVVAKVREDFITYGVGDAVLNELQALWEMKMLHCGAISGNIDRNR 280 MAS NVSTVYISVIDDV++KVR+DFI+YGVGDAVLNELQALWEMKMLHCGAISG IDR++ Sbjct: 1 MASSNVSTVYISVIDDVISKVRDDFISYGVGDAVLNELQALWEMKMLHCGAISGTIDRSK 60 Query: 281 XXXXXXXXXXXXXXXXXVHDLNVPYEATSEEYATPTADMLFXXXXXXXXXXXXXXGIDTG 460 VHDLNVPYEATSEEYATPTADMLF G D G Sbjct: 61 AAPAPSAGTPGAGTTPPVHDLNVPYEATSEEYATPTADMLFPPTPLQTPIQTPLPGTDAG 120 Query: 461 MYNIPTGPSDYAPSPISDMRNGMGMNGSDPKTGRPSPYMQPPSPWMNQRPLGVDVNVAYE 640 MYNIPTGPSDYAPSPISD+RNGM MNG+DPKTGRPSPYM PPSPWM QRPLGVDVNVAY Sbjct: 121 MYNIPTGPSDYAPSPISDVRNGMAMNGADPKTGRPSPYMPPPSPWMTQRPLGVDVNVAYV 180 Query: 641 ESREDPDRLMQPQPLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGCADQVAEFVGSKD 820 E+REDPDR QP LTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDG ADQ+ EFV SKD Sbjct: 181 ENREDPDRTGQPPQLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGSADQIVEFVVSKD 240 Query: 821 NAQQVWNSILNKQESVTKTLSIKESTIPPVLPQRDGIQDDYNDQFFFPGVPTEDYNTPGE 1000 NAQQ+W+SI+NKQ + TK S KE+ I P +PQRDG+ DDYND F+F GVPTEDYNTPGE Sbjct: 241 NAQQLWSSIVNKQGTATKESSTKETIIAPTIPQRDGM-DDYNDPFYFQGVPTEDYNTPGE 299 Query: 1001 SSEYRTPTPAIATPKPRNDMAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHL 1180 SSEYR PTPA+ TPKPRND+ PNTQHL Sbjct: 300 SSEYRAPTPAVGTPKPRNDVG-------DDDEPPLNEDDDDDDELDDLEQGEDEPNTQHL 352 Query: 1181 VLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKASGEFDF 1306 VLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKA+GEFDF Sbjct: 353 VLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKATGEFDF 394
>AK059340:Os02g0147700 | Length = 342 Score = 32.3 bits (72), Expect = 0.96 Identities = 27/79 (34%), Positives = 37/79 (46%) Frame = +2 Query: 641 ESREDPDRLMQPQPLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGCADQVAEFVGSKD 820 E EDPD L QP T +M+SSG D+ P P+ + P + +Q E S D Sbjct: 3 EEEEDPDWLRAFQPPTTSTVMLSSGS---DDSPENSPTRT-TPSGE---EQKGENKASSD 55 Query: 821 NAQQVWNSILNKQESVTKT 877 +A + LNK + T T Sbjct: 56 HAGDGDAAALNKGKKATPT 74
>AK059092:Os06g0208300 | Length = 291 Score = 32.3 bits (72), Expect = 0.96 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +2 Query: 494 APSPISDMRNGMGMNGSDPKTGRPSPYMQPPSPWMNQRPLG 616 AP+P S N G++ +D T R S Y PSP++ P+G Sbjct: 104 APTPGSGWANTPGVSYNDAPTPRESNYGNAPSPYVPSTPVG 144
>AY224424:Os08g0557400 | Length = 268 Score = 32.3 bits (72), Expect = 0.96 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 247 WRNLREHRPQQGPTRVRWRCSWCRRDSTSARP 342 WR+ RE P GP +V+ CS+C+R + S P Sbjct: 201 WRH-REPLPDSGPKKVKLMCSYCKRHTESEVP 231
>AK060067:Os08g0557400 | Length = 268 Score = 32.3 bits (72), Expect = 0.96 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 247 WRNLREHRPQQGPTRVRWRCSWCRRDSTSARP 342 WR+ RE P GP +V+ CS+C+R + S P Sbjct: 201 WRH-REPLPDSGPKKVKLMCSYCKRHTESEVP 231
>AK121343:Os07g0619800 | Length = 546 Score = 31.6 bits (70), Expect = 1.6 Identities = 21/68 (30%), Positives = 27/68 (39%) Frame = +1 Query: 187 RWRCRPQRTPGSLGNEDAALWRNLREHRPQQGPTRVRWRCSWCRRDSTSARPQRALRGHV 366 R R P+R G A R R + T W W S + P+R+ RG Sbjct: 103 RGRRSPRRAATWKGRAAAGSTRGSGSTRGSRRSTT--WGTRWGEATSATPAPRRSRRGRA 160 Query: 367 RGVRHPNR 390 RG R P+R Sbjct: 161 RGTRSPSR 168
>Os04g0419500:Os04g0419500 | Length = 431 Score = 31.2 bits (69), Expect = 2.1 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +2 Query: 494 APSPISDMRNGMGMNGSDPKTGRPSPYMQPPSP 592 AP P + R M + DP GRP+P + P P Sbjct: 5 APRPTARCRRAMAVAPPDPDVGRPNPAKEVPDP 37
>AK065729:Os10g0550000 | Length = 901 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/88 (23%), Positives = 44/88 (50%) Frame = +2 Query: 641 ESREDPDRLMQPQPLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGCADQVAEFVGSKD 820 + ++ P+R +PQP++K ++ + R+ DE + S ++ QQ C Q EF G + Sbjct: 329 DRKQKPERANRPQPVSKIVILKPNQGRRIDE--TETTSSRYLHQQP-CTSQAPEFSGRES 385 Query: 821 NAQQVWNSILNKQESVTKTLSIKESTIP 904 + + + + + VT +++ IP Sbjct: 386 SKFSI-KEVRRRFKIVTGDSKREKNAIP 412
>AK110205: | Length = 983 Score = 30.0 bits (66), Expect = 4.8 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +2 Query: 530 GMNGSDPKTGRPSPYMQPPSPWMNQRPLGVDVNVAYEESREDP 658 GMN DP+ RPS PP+P + RP N E S +P Sbjct: 899 GMNQLDPRAARPS---NPPTP-SSTRPTSPQPNAGLERSTANP 937
>AK122091:Os05g0560600 | Length = 346 Score = 30.0 bits (66), Expect = 4.8 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 2/136 (1%) Frame = +2 Query: 482 PSDYAPSPISDMRNGMGMNGSDPKTGRPSPYMQPPSPW--MNQRPLGVDVNVAYEESRED 655 PS ++ P D G ++ S K PSP PP P+ M P V R+ Sbjct: 116 PSTWSFFPELDRLVGPTLSASASKRPSPSPSPVPPPPYFAMPIHPSAV---------RKP 166 Query: 656 PDRLMQPQPLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGCADQVAEFVGSKDNAQQV 835 P P P L + S +R LP+ + + QQ+ A A S+D+ Sbjct: 167 PSPSPSPSPPPPMALPLPSYRR-----GSPLPAAALI-QQEAAAAAAAAVSDSEDSEGPG 220 Query: 836 WNSILNKQESVTKTLS 883 N+ N Q S ++++S Sbjct: 221 DNNNHNAQRSPSQSVS 236
>AK067862:Os05g0560600 | Length = 346 Score = 30.0 bits (66), Expect = 4.8 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 2/136 (1%) Frame = +2 Query: 482 PSDYAPSPISDMRNGMGMNGSDPKTGRPSPYMQPPSPW--MNQRPLGVDVNVAYEESRED 655 PS ++ P D G ++ S K PSP PP P+ M P V R+ Sbjct: 116 PSTWSFFPELDRLVGPTLSASASKRPSPSPSPVPPPPYFAMPIHPSAV---------RKP 166 Query: 656 PDRLMQPQPLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGCADQVAEFVGSKDNAQQV 835 P P P L + S +R LP+ + + QQ+ A A S+D+ Sbjct: 167 PSPSPSPSPPPPMALPLPSYRR-----GSPLPAAALI-QQEAAAAAAAAVSDSEDSEGPG 220 Query: 836 WNSILNKQESVTKTLS 883 N+ N Q S ++++S Sbjct: 221 DNNNHNAQRSPSQSVS 236
>AK108076:Os08g0465300 | Length = 223 Score = 29.3 bits (64), Expect = 8.2 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Frame = +1 Query: 295 RWRCSWCRRDSTSARPQR--ALRGHVRGVRHPNRRH 396 RW CSWC A P R RG +RG R +R H Sbjct: 189 RWSCSWC-----CASPARWWGRRGALRGTRPGSRPH 219 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 43,565,784 Number of extensions: 1042983 Number of successful extensions: 3869 Number of sequences better than 10.0: 12 Number of HSP's gapped: 3853 Number of HSP's successfully gapped: 13 Length of query: 527 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 422 Effective length of database: 11,195,550 Effective search space: 4724522100 Effective search space used: 4724522100 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)