ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf37d14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK065373:Os05g0292200 576 e-164
2AK059340:Os02g0147700 32 0.96
3AK059092:Os06g0208300 32 0.96
4AY224424:Os08g0557400 32 0.96
5AK060067:Os08g0557400 32 0.96
6AK121343:Os07g0619800 32 1.6
7Os04g0419500:Os04g0419500 31 2.1
8AK065729:Os10g0550000 31 2.1
9AK110205: 30 4.8
10AK122091:Os05g0560600 30 4.8
11AK067862:Os05g0560600 30 4.8
12AK108076:Os08g0465300 29 8.2

>AK065373:Os05g0292200 |
          Length = 394
 Score =  576 bits (1484), Expect = e-164
 Identities = 288/402 (71%), Positives = 309/402 (76%)
 Frame = +2

Query: 101  MASGNVSTVYISVIDDVVAKVREDFITYGVGDAVLNELQALWEMKMLHCGAISGNIDRNR 280
            MAS NVSTVYISVIDDV++KVR+DFI+YGVGDAVLNELQALWEMKMLHCGAISG IDR++
Sbjct: 1    MASSNVSTVYISVIDDVISKVRDDFISYGVGDAVLNELQALWEMKMLHCGAISGTIDRSK 60

Query: 281  XXXXXXXXXXXXXXXXXVHDLNVPYEATSEEYATPTADMLFXXXXXXXXXXXXXXGIDTG 460
                             VHDLNVPYEATSEEYATPTADMLF              G D G
Sbjct: 61   AAPAPSAGTPGAGTTPPVHDLNVPYEATSEEYATPTADMLFPPTPLQTPIQTPLPGTDAG 120

Query: 461  MYNIPTGPSDYAPSPISDMRNGMGMNGSDPKTGRPSPYMQPPSPWMNQRPLGVDVNVAYE 640
            MYNIPTGPSDYAPSPISD+RNGM MNG+DPKTGRPSPYM PPSPWM QRPLGVDVNVAY 
Sbjct: 121  MYNIPTGPSDYAPSPISDVRNGMAMNGADPKTGRPSPYMPPPSPWMTQRPLGVDVNVAYV 180

Query: 641  ESREDPDRLMQPQPLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGCADQVAEFVGSKD 820
            E+REDPDR  QP  LTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDG ADQ+ EFV SKD
Sbjct: 181  ENREDPDRTGQPPQLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGSADQIVEFVVSKD 240

Query: 821  NAQQVWNSILNKQESVTKTLSIKESTIPPVLPQRDGIQDDYNDQFFFPGVPTEDYNTPGE 1000
            NAQQ+W+SI+NKQ + TK  S KE+ I P +PQRDG+ DDYND F+F GVPTEDYNTPGE
Sbjct: 241  NAQQLWSSIVNKQGTATKESSTKETIIAPTIPQRDGM-DDYNDPFYFQGVPTEDYNTPGE 299

Query: 1001 SSEYRTPTPAIATPKPRNDMAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHL 1180
            SSEYR PTPA+ TPKPRND+                                  PNTQHL
Sbjct: 300  SSEYRAPTPAVGTPKPRNDVG-------DDDEPPLNEDDDDDDELDDLEQGEDEPNTQHL 352

Query: 1181 VLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKASGEFDF 1306
            VLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKA+GEFDF
Sbjct: 353  VLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKATGEFDF 394



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>AK059340:Os02g0147700 |
          Length = 342

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 27/79 (34%), Positives = 37/79 (46%)
 Frame = +2

Query: 641 ESREDPDRLMQPQPLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGCADQVAEFVGSKD 820
           E  EDPD L   QP T   +M+SSG    D+ P   P+ +  P  +   +Q  E   S D
Sbjct: 3   EEEEDPDWLRAFQPPTTSTVMLSSGS---DDSPENSPTRT-TPSGE---EQKGENKASSD 55

Query: 821 NAQQVWNSILNKQESVTKT 877
           +A     + LNK +  T T
Sbjct: 56  HAGDGDAAALNKGKKATPT 74



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>AK059092:Os06g0208300 |
          Length = 291

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 494 APSPISDMRNGMGMNGSDPKTGRPSPYMQPPSPWMNQRPLG 616
           AP+P S   N  G++ +D  T R S Y   PSP++   P+G
Sbjct: 104 APTPGSGWANTPGVSYNDAPTPRESNYGNAPSPYVPSTPVG 144



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>AY224424:Os08g0557400 |
          Length = 268

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 247 WRNLREHRPQQGPTRVRWRCSWCRRDSTSARP 342
           WR+ RE  P  GP +V+  CS+C+R + S  P
Sbjct: 201 WRH-REPLPDSGPKKVKLMCSYCKRHTESEVP 231



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>AK060067:Os08g0557400 |
          Length = 268

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 247 WRNLREHRPQQGPTRVRWRCSWCRRDSTSARP 342
           WR+ RE  P  GP +V+  CS+C+R + S  P
Sbjct: 201 WRH-REPLPDSGPKKVKLMCSYCKRHTESEVP 231



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>AK121343:Os07g0619800 |
          Length = 546

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 21/68 (30%), Positives = 27/68 (39%)
 Frame = +1

Query: 187 RWRCRPQRTPGSLGNEDAALWRNLREHRPQQGPTRVRWRCSWCRRDSTSARPQRALRGHV 366
           R R  P+R     G   A   R     R  +  T   W   W    S +  P+R+ RG  
Sbjct: 103 RGRRSPRRAATWKGRAAAGSTRGSGSTRGSRRSTT--WGTRWGEATSATPAPRRSRRGRA 160

Query: 367 RGVRHPNR 390
           RG R P+R
Sbjct: 161 RGTRSPSR 168



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>Os04g0419500:Os04g0419500 |
          Length = 431

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 494 APSPISDMRNGMGMNGSDPKTGRPSPYMQPPSP 592
           AP P +  R  M +   DP  GRP+P  + P P
Sbjct: 5   APRPTARCRRAMAVAPPDPDVGRPNPAKEVPDP 37



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>AK065729:Os10g0550000 |
          Length = 901

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 21/88 (23%), Positives = 44/88 (50%)
 Frame = +2

Query: 641 ESREDPDRLMQPQPLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGCADQVAEFVGSKD 820
           + ++ P+R  +PQP++K  ++  +  R+ DE   +  S  ++ QQ  C  Q  EF G + 
Sbjct: 329 DRKQKPERANRPQPVSKIVILKPNQGRRIDE--TETTSSRYLHQQP-CTSQAPEFSGRES 385

Query: 821 NAQQVWNSILNKQESVTKTLSIKESTIP 904
           +   +   +  + + VT     +++ IP
Sbjct: 386 SKFSI-KEVRRRFKIVTGDSKREKNAIP 412



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>AK110205: |
          Length = 983

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +2

Query: 530  GMNGSDPKTGRPSPYMQPPSPWMNQRPLGVDVNVAYEESREDP 658
            GMN  DP+  RPS    PP+P  + RP     N   E S  +P
Sbjct: 899  GMNQLDPRAARPS---NPPTP-SSTRPTSPQPNAGLERSTANP 937



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>AK122091:Os05g0560600 |
          Length = 346

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 2/136 (1%)
 Frame = +2

Query: 482 PSDYAPSPISDMRNGMGMNGSDPKTGRPSPYMQPPSPW--MNQRPLGVDVNVAYEESRED 655
           PS ++  P  D   G  ++ S  K   PSP   PP P+  M   P  V         R+ 
Sbjct: 116 PSTWSFFPELDRLVGPTLSASASKRPSPSPSPVPPPPYFAMPIHPSAV---------RKP 166

Query: 656 PDRLMQPQPLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGCADQVAEFVGSKDNAQQV 835
           P     P P     L + S +R        LP+ + + QQ+  A   A    S+D+    
Sbjct: 167 PSPSPSPSPPPPMALPLPSYRR-----GSPLPAAALI-QQEAAAAAAAAVSDSEDSEGPG 220

Query: 836 WNSILNKQESVTKTLS 883
            N+  N Q S ++++S
Sbjct: 221 DNNNHNAQRSPSQSVS 236



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>AK067862:Os05g0560600 |
          Length = 346

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 2/136 (1%)
 Frame = +2

Query: 482 PSDYAPSPISDMRNGMGMNGSDPKTGRPSPYMQPPSPW--MNQRPLGVDVNVAYEESRED 655
           PS ++  P  D   G  ++ S  K   PSP   PP P+  M   P  V         R+ 
Sbjct: 116 PSTWSFFPELDRLVGPTLSASASKRPSPSPSPVPPPPYFAMPIHPSAV---------RKP 166

Query: 656 PDRLMQPQPLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGCADQVAEFVGSKDNAQQV 835
           P     P P     L + S +R        LP+ + + QQ+  A   A    S+D+    
Sbjct: 167 PSPSPSPSPPPPMALPLPSYRR-----GSPLPAAALI-QQEAAAAAAAAVSDSEDSEGPG 220

Query: 836 WNSILNKQESVTKTLS 883
            N+  N Q S ++++S
Sbjct: 221 DNNNHNAQRSPSQSVS 236



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>AK108076:Os08g0465300 |
          Length = 223

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +1

Query: 295 RWRCSWCRRDSTSARPQR--ALRGHVRGVRHPNRRH 396
           RW CSWC      A P R    RG +RG R  +R H
Sbjct: 189 RWSCSWC-----CASPARWWGRRGALRGTRPGSRPH 219


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 43,565,784
Number of extensions: 1042983
Number of successful extensions: 3869
Number of sequences better than 10.0: 12
Number of HSP's gapped: 3853
Number of HSP's successfully gapped: 13
Length of query: 527
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 422
Effective length of database: 11,195,550
Effective search space: 4724522100
Effective search space used: 4724522100
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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