ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf37b22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK064347:Os12g0488800 169 3e-42
2AK102145:Os03g0851900 29 4.1
3AK059105:Os03g0851900 29 4.1
4Os07g0549900:Os07g0549900 28 6.9

>AK064347:Os12g0488800 |
          Length = 111
 Score =  169 bits (428), Expect = 3e-42
 Identities = 80/96 (83%), Positives = 85/96 (88%)
 Frame = +3

Query: 288 MKIEKANAGHLTNFEVLDFLRTRGAKIDPMGCLGAVAASECKVYEYLLKTPACNQTRESV 467
           MKIEK NAG LTNFEVLDFLR+RGAK DPMGCLGAVAASECKVYEYLLKTPACNQTRES+
Sbjct: 1   MKIEKTNAGFLTNFEVLDFLRSRGAKTDPMGCLGAVAASECKVYEYLLKTPACNQTRESI 60

Query: 468 TEFANRCEGFKLTDADKQNIINWRPASAADVYAMVE 575
            EF  RCE FKLT+ADK N+INWRP+SAAD YA  E
Sbjct: 61  NEFVTRCESFKLTNADKLNVINWRPSSAADAYAQNE 96



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>AK102145:Os03g0851900 |
          Length = 613

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +3

Query: 537 RPASAADVYAMVEECGKRFCKDERGMPQDEEDRANELVALVDEVF 671
           RP  AAD  A+       F  D   M     D+A   + L+DE++
Sbjct: 448 RPVGAADYIAIARNYHTIFISDIPAMSMKIRDKARRFITLIDELY 492



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>AK059105:Os03g0851900 |
          Length = 427

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +3

Query: 537 RPASAADVYAMVEECGKRFCKDERGMPQDEEDRANELVALVDEVF 671
           RP  AAD  A+       F  D   M     D+A   + L+DE++
Sbjct: 262 RPVGAADYIAIARNYHTIFISDIPAMSMKIRDKARRFITLIDELY 306



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>Os07g0549900:Os07g0549900 |
          Length = 253

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +3

Query: 138 HPRSVHNQVAAPPDYTERDTRRSNSRRPGP 227
           HPR  H   A PP    R  RR  ++ PGP
Sbjct: 196 HPRRRHLHRARPPQDRHRHGRRLRAQAPGP 225


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 27,408,916
Number of extensions: 625955
Number of successful extensions: 1516
Number of sequences better than 10.0: 4
Number of HSP's gapped: 1515
Number of HSP's successfully gapped: 4
Length of query: 307
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 207
Effective length of database: 11,395,755
Effective search space: 2358921285
Effective search space used: 2358921285
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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