ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf40c19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X64254.1|HVMRNA H.vulgare mRNA for seed protein B32E Length = 2384 Score = 2337 bits (1179), Expect = 0.0 Identities = 1182/1183 (99%) Strand = Plus / Plus Query: 1241 aggtctgcacgggacgccgcagcagcacagggcaacatgtcttctgttccgagaaatgaa 1300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 aggtctgcacgggacgccgcagcagcacagggcaacatgtcttctgttccgagaaatgaa 1261 Query: 1301 aggccatacccgagcccacttcttcccccaccaccatcgacaaaaaggcctgtttacaca 1360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 aggccatacccgagcccacttcttcccccaccaccatcgacaaaaaggcctgtttacaca 1321 Query: 1361 gaggcaagcagtgtcgactatctaagtggagactcctacaaatcggaaaaagtaccagat 1420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1322 gaggcaagcagtgtcgactatctaagtggagactcctacaaatcggaaaaagtaccagat 1381 Query: 1421 gattttgtcaacccaacagcccccacaaatatatctgcaccatcttattcaaaaacagag 1480 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1382 gattttgtcaacccaacagcccccgcaaatatatctgcaccatcttattcaaaaacagag 1441 Query: 1481 acggatcacgagccaaaatatgatagcaggtcagaatatgtgcctgatgacttcataaac 1540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1442 acggatcacgagccaaaatatgatagcaggtcagaatatgtgcctgatgacttcataaac 1501 Query: 1541 ccaactgcagcacccagtttttccatgccctctcgccctacgagtgagccgaataattca 1600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1502 ccaactgcagcacccagtttttccatgccctctcgccctacgagtgagccgaataattca 1561 Query: 1601 tctgtgaataagcttgagagccttcctgatgatgacttcataaaccccactgcacttcct 1660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1562 tctgtgaataagcttgagagccttcctgatgatgacttcataaaccccactgcacttcct 1621 Query: 1661 ggcttttcttcgtcttcaactagtgaagatcttccaaaagctccatgggaagcgcaagct 1720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1622 ggcttttcttcgtcttcaactagtgaagatcttccaaaagctccatgggaagcgcaagct 1681 Query: 1721 ccagtttccctaccaccgcctcctgcaaggcatggccaaagacaacagttctttgagcaa 1780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1682 ccagtttccctaccaccgcctcctgcaaggcatggccaaagacaacagttctttgagcaa 1741 Query: 1781 cagcatggctttcctggtgggaacaatgaaggtggctatgatgaaatgctgacgcagaca 1840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1742 cagcatggctttcctggtgggaacaatgaaggtggctatgatgaaatgctgacgcagaca 1801 Query: 1841 ggaagcctttctcttaatcaaaggaacactgagaatgggaagagtgcatcggtgtcgact 1900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1802 ggaagcctttctcttaatcaaaggaacactgagaatgggaagagtgcatcggtgtcgact 1861 Query: 1901 gcatcccgccagcccaaacatgaggatgccctttttaaggatcttgttgattttgccaag 1960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1862 gcatcccgccagcccaaacatgaggatgccctttttaaggatcttgttgattttgccaag 1921 Query: 1961 aagaatccgtcttctccatctaaaccagccaacagccgcaggactcgctgagtgatgagt 2020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1922 aagaatccgtcttctccatctaaaccagccaacagccgcaggactcgctgagtgatgagt 1981 Query: 2021 gttccagtcatgtaacacacataattgagttgccggcctgctggttttgctacaggctag 2080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1982 gttccagtcatgtaacacacataattgagttgccggcctgctggttttgctacaggctag 2041 Query: 2081 cgaattagatataccgtcaaataagagggttcggagtttggactgtttcacatcacaaca 2140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2042 cgaattagatataccgtcaaataagagggttcggagtttggactgtttcacatcacaaca 2101 Query: 2141 ttggcagttatttgatttgcgcattggacaattaaaatcacaggttcagatacatagtca 2200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2102 ttggcagttatttgatttgcgcattggacaattaaaatcacaggttcagatacatagtca 2161 Query: 2201 tgatactgggtgtggtgtgtagtgagctgcctttcacctttttcttgtgtggtattggtt 2260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2162 tgatactgggtgtggtgtgtagtgagctgcctttcacctttttcttgtgtggtattggtt 2221 Query: 2261 atcgattctggctttattttgcttagctgtatatatttctccatttgacagcagtattct 2320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2222 atcgattctggctttattttgcttagctgtatatatttctccatttgacagcagtattct 2281 Query: 2321 attcatagttgagtttacgattgatcttgtaagacttagttaacagtttattttcaacgt 2380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2282 attcatagttgagtttacgattgatcttgtaagacttagttaacagtttattttcaacgt 2341 Query: 2381 ggacgctcccatttgttcttgtactgagcagtaaccttggcta 2423 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2342 ggacgctcccatttgttcttgtactgagcagtaaccttggcta 2384 Score = 468 bits (236), Expect = e-128 Identities = 236/236 (100%) Strand = Plus / Plus Query: 1009 tgatgagagccttctgtttcaggctctaggactaaatgatgagttgcagcgtgttcttca 1068 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 tgatgagagccttctgtttcaggctctaggactaaatgatgagttgcagcgtgttcttca 888 Query: 1069 gcgtcatgatgacatagcaaaaggagttcctccaaacataccagtgcctgttgctggtaa 1128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 gcgtcatgatgacatagcaaaaggagttcctccaaacataccagtgcctgttgctggtaa 948 Query: 1129 tgtaaaccaaggggcagcccctcctcggcctgccggggtgtcattttcccctcttcttaa 1188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 949 tgtaaaccaaggggcagcccctcctcggcctgccggggtgtcattttcccctcttcttaa 1008 Query: 1189 tgtacaccatgaggacgatgaaccagaagatgagttctctgtgctttctcgcaggt 1244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 tgtacaccatgaggacgatgaaccagaagatgagttctctgtgctttctcgcaggt 1064 Score = 119 bits (60), Expect = 5e-23 Identities = 88/92 (95%), Gaps = 4/92 (4%) Strand = Plus / Plus Query: 921 agggtgtgagagaggaggt-cattgttgaccttgttgggcagtgtcga-tctt-accatg 977 ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| Sbjct: 662 agggtgtgagagaggaggttcattgttgaccttgttgggcagtgtcgaatctttaccatg 721 Query: 978 ct-cgtgtgatggatcttgttagcgatactgg 1008 || ||||||||||||||||||||||||||||| Sbjct: 722 cttcgtgtgatggatcttgttagcgatactgg 753
>emb|CT834390.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA230J18, full insert sequence Length = 2366 Score = 954 bits (481), Expect = 0.0 Identities = 747/835 (89%), Gaps = 3/835 (0%) Strand = Plus / Plus Query: 270 aaatgtcggcggccgtggcgtgcgcagagcgggcgacgagcgacatgctgatcggccccg 329 ||||| || |||||||||||||||| ||| ||||||||||||||||||||||||| || | Sbjct: 247 aaatggcgacggccgtggcgtgcgcggagagggcgacgagcgacatgctgatcgggccgg 306 Query: 330 actgggccgtcaacatcgagctctgcgacatcatcaacatggatcccggacaagcaaagg 389 | ||||| || ||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 307 attgggcggtgaacatcgagctctgcgacatcatcaacatggatcctggacaagccaagg 366 Query: 390 atgcacttaagctcctaaagaagcgccttgggaataagaattcaaaagtgcaaattctgg 449 | |||| |||||||||||||| ||||| || || |||||||||||||||||||||||| Sbjct: 367 agacactcaagctcctaaagaaacgcctgggaaacaagaattcaaaagtgcaaattctga 426 Query: 450 ccctttatgtgctagagactctaagcaaaaattgcggggatattgtttaccaacagatca 509 | ||||||||||||||||||||||||||||| || |||||| |||||||||| || |||| Sbjct: 427 cgctttatgtgctagagactctaagcaaaaactgtggggatgttgtttaccagcaaatca 486 Query: 510 ttgagcgtgatatactaagcgaaatggtcaagatagtaaagaaaaagccagacttaaatg 569 ||||||| || ||| |||| |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 487 ttgagcgagacatattaagtgaaatggttaagatagtaaagaaaaagccagatttaaatg 546 Query: 570 tgcgggagaaaatattgagtctgattgacacatggcaagtagcttttgggggtccttccg 629 | |||||||||||||||||| ||||||||||||||||||| |||||||| ||| | || | Sbjct: 547 ttcgggagaaaatattgagtttgattgacacatggcaagtggcttttggaggtgcatctg 606 Query: 630 ggagatatccccagtatcacactgcgtaccaagaactcagggcggctggtgttgattttc 689 | |||||||||||||||||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 607 gcagatatccccagtatcacgctgcttaccaagaactcaggaatgctggtgttgattttc 666 Query: 690 cacctcgtgaggagaatacagttccactttttacacctcctcagactcaacctttgaggc 749 |||||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||| Sbjct: 667 cacctcgtgaggagaacacggttccactgtttacacctcctcaaactcaaccattgaggc 726 Query: 750 agccacatttatat---cctccaggtcaaagttatgaagatgtagctatacaagcttctc 806 | |||||| ||||| |||||||||||||| |||||||||| ||| ||||||||||||| Sbjct: 727 aaccacatctatatccacctccaggtcaaagctatgaagatgcagcgatacaagcttctc 786 Query: 807 tccaatctagtacccctgctgcacctcccctgagtctaagtgagattcagagcgctcgtg 866 | |||||||| ||||| |||||||| || |||||||||||||||||||||| ||||| | Sbjct: 787 ttcaatctagcgccccttctgcacctgccttgagtctaagtgagattcagagtgctcgag 846 Query: 867 gaattgtggatgtgctggatgagatgttaaatgcacttgaccacagacaccccgagggtg 926 |||||||||||||| ||||||||||||||||||| | |||||||| ||||| ||||||| Sbjct: 847 gaattgtggatgtgttggatgagatgttaaatgctttggaccacaggcaccctgagggtg 906 Query: 927 tgagagaggaggtcattgttgaccttgttgggcagtgtcgatcttaccatgctcgtgtga 986 |||| |||||||||||||||||||||||||||||||| |||||||| || | ||| || | Sbjct: 907 tgagggaggaggtcattgttgaccttgttgggcagtgccgatcttatcaaggtcgagtca 966 Query: 987 tggatcttgttagcgatactggtgatgagagccttctgtttcaggctctaggactaaatg 1046 |||| ||||||||| |||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 967 tggaccttgttagcaatactggtgatgagagccttctatttcaggctctcggtttaaatg 1026 Query: 1047 atgagttgcagcgtgttcttcagcgtcatgatgacatagcaaaaggagttcctcc 1101 |||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 1027 atgaattgcagcgtgttcttcagcgtcatgatgacatcgcaaagggagtgcctcc 1081 Score = 343 bits (173), Expect = 2e-90 Identities = 467/565 (82%) Strand = Plus / Plus Query: 1115 cctgttgctggtaatgtaaaccaaggggcagcccctcctcggcctgccggggtgtcattt 1174 |||| ||||| ||||||||||||||| ||||||||||| ||||| | ||||| |||||| Sbjct: 1098 cctgctgctgctaatgtaaaccaaggaacagcccctcctaggcctactggggtttcattt 1157 Query: 1175 tcccctcttcttaatgtacaccatgaggacgatgaaccagaagatgagttctctgtgctt 1234 ||||| |||||||||||||||||||| |||||||| |||||||| |||||||| |||||| Sbjct: 1158 tccccacttcttaatgtacaccatgaagacgatgagccagaagacgagttctccgtgctt 1217 Query: 1235 tctcgcaggtctgcacgggacgccgcagcagcacagggcaacatgtcttctgttccgaga 1294 || |||||||||||| |||| | | ||||| |||||||||| | |||||| ||| | | Sbjct: 1218 tcccgcaggtctgcaagggatggcacagcaacacagggcaatctaccttctgctccaaaa 1277 Query: 1295 aatgaaaggccatacccgagcccacttcttcccccaccaccatcgacaaaaaggcctgtt 1354 | ||||||||| ||||| |||||||||||||| || |||||||| |||| ||||| ||| Sbjct: 1278 agtgaaaggccttacccaagcccacttcttcctccgccaccatcatcaaagaggccagtt 1337 Query: 1355 tacacagaggcaagcagtgtcgactatctaagtggagactcctacaaatcggaaaaagta 1414 | ||| |||||||||||||| |||||||| ||||| ||||||||||| | ||||||||| Sbjct: 1338 ttcacggaggcaagcagtgttgactatcttagtggcgactcctacaagacagaaaaagta 1397 Query: 1415 ccagatgattttgtcaacccaacagcccccacaaatatatctgcaccatcttattcaaaa 1474 ||||||| ||| | || ||||| ||||| | |||||| |||| || ||| |||| ||| Sbjct: 1398 tcagatgactttattaatccaactgccccagccaatatacctgcgccgtctcattcgaaa 1457 Query: 1475 acagagacggatcacgagccaaaatatgatagcaggtcagaatatgtgcctgatgacttc 1534 ||||| ||| ||| ||||| ||||||||| |||||||| |||| ||||||||||| Sbjct: 1458 acagaaacgaatccgccgccaagttatgatagccggtcagaaagtgtgtctgatgacttc 1517 Query: 1535 ataaacccaactgcagcacccagtttttccatgccctctcgccctacgagtgagccgaat 1594 ||||||||||||||||||||||| || || ||||| ||||| |||| ||| ||| | ||| Sbjct: 1518 ataaacccaactgcagcacccagcttctctatgccttctcgtcctatgagcgagtcaaat 1577 Query: 1595 aattcatctgtgaataagcttgagagccttcctgatgatgacttcataaaccccactgca 1654 | | ||| |||| || ||||| || ||||||||||| || |||||||| || || Sbjct: 1578 cgtcctgttgtcaataggcaggagagtctacctgatgatgattttataaacccaacagct 1637 Query: 1655 cttcctggcttttcttcgtcttcaa 1679 | ||||| |||||||||||||||| Sbjct: 1638 atgcctggtttttcttcgtcttcaa 1662 Score = 135 bits (68), Expect = 9e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 1683 gtgaagatcttccaaaagctccatgggaagcgcaagctccagtttccctaccaccgcctc 1742 |||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||| Sbjct: 1687 gtgaagatcttccaaaagctccatgggaagcgcaagctccaggttccttaccgccacctc 1746 Query: 1743 ctgcaaggcatggccaaagacaacagttctttgagcaacagcatggctttcctggtggga 1802 | |||||| ||||||||||||| |||| ||| ||||||||||| || ||||| |||| | Sbjct: 1747 cagcaaggtatggccaaagacagcagtacttcgagcaacagcacggtcttcctagtggta 1806 Query: 1803 acaa 1806 |||| Sbjct: 1807 acaa 1810 Score = 125 bits (63), Expect = 8e-25 Identities = 141/167 (84%) Strand = Plus / Plus Query: 1845 gcctttctcttaatcaaaggaacactgagaatgggaagagtgcatcggtgtcgactgcat 1904 ||||||| |||||||| ||||| || ||||||| || || |||| || |||| |||| Sbjct: 1849 gcctttcgcttaatcagaggaataccgagaatgagagaggttcatcagttccgaccgcat 1908 Query: 1905 cccgccagcccaaacatgaggatgccctttttaaggatcttgttgattttgccaagaaga 1964 | || ||| |||||| ||| ||| | ||||| ||||||||||| ||||| || ||||| | Sbjct: 1909 cacggcagaccaaacctgaagattctcttttcaaggatcttgtcgatttcgctaagaaca 1968 Query: 1965 atccgtcttctccatctaaaccagccaacagccgcaggactcgctga 2011 | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1969 aaccgtcttctccatctaaaccagccaacagccgcaggactcgctga 2015 Score = 58.0 bits (29), Expect = 2e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 2275 tattttgcttagctgtatatatttctccatttgacagcagtattc 2319 |||||| ||| |||||||||||| ||||||||||||||| ||||| Sbjct: 2303 tattttcctttgctgtatatattactccatttgacagcaatattc 2347 Score = 50.1 bits (25), Expect = 0.039 Identities = 25/25 (100%) Strand = Plus / Plus Query: 204 tcagattcggatttagggtttttgg 228 ||||||||||||||||||||||||| Sbjct: 209 tcagattcggatttagggtttttgg 233
>ref|NM_001073970.1| Oryza sativa (japonica cultivar-group) Os11g0199700 (Os11g0199700) mRNA, complete cds Length = 2464 Score = 954 bits (481), Expect = 0.0 Identities = 747/835 (89%), Gaps = 3/835 (0%) Strand = Plus / Plus Query: 270 aaatgtcggcggccgtggcgtgcgcagagcgggcgacgagcgacatgctgatcggccccg 329 ||||| || |||||||||||||||| ||| ||||||||||||||||||||||||| || | Sbjct: 288 aaatggcgacggccgtggcgtgcgcggagagggcgacgagcgacatgctgatcgggccgg 347 Query: 330 actgggccgtcaacatcgagctctgcgacatcatcaacatggatcccggacaagcaaagg 389 | ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 348 attgggcggtgaacatcgagctctgcgacatcatcaacatggatcccggacaagccaagg 407 Query: 390 atgcacttaagctcctaaagaagcgccttgggaataagaattcaaaagtgcaaattctgg 449 || |||| |||||||||||||| ||||| || || |||||||||||||||||||||||| Sbjct: 408 atacactcaagctcctaaagaaacgcctgggaaacaagaattcaaaagtgcaaattctga 467 Query: 450 ccctttatgtgctagagactctaagcaaaaattgcggggatattgtttaccaacagatca 509 | ||||||||||||||||||||||||||||| || |||||| |||||||||| || |||| Sbjct: 468 cgctttatgtgctagagactctaagcaaaaactgtggggatgttgtttaccagcaaatca 527 Query: 510 ttgagcgtgatatactaagcgaaatggtcaagatagtaaagaaaaagccagacttaaatg 569 ||||||| || ||| |||| |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 528 ttgagcgagacatattaagtgaaatggttaagatagtaaagaaaaagccagatttaaatg 587 Query: 570 tgcgggagaaaatattgagtctgattgacacatggcaagtagcttttgggggtccttccg 629 | |||||||||||||||||| ||||||||||||||||||| |||||||| ||| | || | Sbjct: 588 ttcgggagaaaatattgagtttgattgacacatggcaagtggcttttggaggtgcatctg 647 Query: 630 ggagatatccccagtatcacactgcgtaccaagaactcagggcggctggtgttgattttc 689 | |||||||||||||||||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 648 gcagatatccccagtatcacgctgcttaccaagaactcaggaatgctggtgttgattttc 707 Query: 690 cacctcgtgaggagaatacagttccactttttacacctcctcagactcaacctttgaggc 749 |||||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||| Sbjct: 708 cacctcgtgaggagaacacggttccactgtttacacctcctcaaactcaaccattgaggc 767 Query: 750 agccacatttatat---cctccaggtcaaagttatgaagatgtagctatacaagcttctc 806 | |||||| ||||| |||||||||||||| |||||||||| ||| ||||||||||||| Sbjct: 768 aaccacatctatatccacctccaggtcaaagctatgaagatgcagcgatacaagcttctc 827 Query: 807 tccaatctagtacccctgctgcacctcccctgagtctaagtgagattcagagcgctcgtg 866 | |||||||| ||||| |||||||| || |||||||||||||||||||||| ||||| | Sbjct: 828 ttcaatctagcgccccttctgcacctgccttgagtctaagtgagattcagagtgctcgag 887 Query: 867 gaattgtggatgtgctggatgagatgttaaatgcacttgaccacagacaccccgagggtg 926 |||||||||||||| ||||||||||||||||||| | |||||||| ||||| ||||||| Sbjct: 888 gaattgtggatgtgttggatgagatgttaaatgctttggaccacaggcaccctgagggtg 947 Query: 927 tgagagaggaggtcattgttgaccttgttgggcagtgtcgatcttaccatgctcgtgtga 986 |||| |||||||||||||||||||||||||||||||| |||||||| || | ||| || | Sbjct: 948 tgagggaggaggtcattgttgaccttgttgggcagtgccgatcttatcaaggtcgagtca 1007 Query: 987 tggatcttgttagcgatactggtgatgagagccttctgtttcaggctctaggactaaatg 1046 |||| ||||||||| |||||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 1008 tggaccttgttagcaatactggtgatgagagccttctatttcaagctctcggtttaaatg 1067 Query: 1047 atgagttgcagcgtgttcttcagcgtcatgatgacatagcaaaaggagttcctcc 1101 |||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 1068 atgaactgcagcgtgttcttcagcgtcatgatgacatcgcaaagggagtgcctcc 1122 Score = 351 bits (177), Expect = 8e-93 Identities = 468/565 (82%) Strand = Plus / Plus Query: 1115 cctgttgctggtaatgtaaaccaaggggcagcccctcctcggcctgccggggtgtcattt 1174 |||| ||||| ||||||||||| ||| ||||||||||| ||||| | ||||| |||||| Sbjct: 1139 cctgctgctgctaatgtaaaccgaggaacagcccctcctaggcctactggggtttcattt 1198 Query: 1175 tcccctcttcttaatgtacaccatgaggacgatgaaccagaagatgagttctctgtgctt 1234 ||||| ||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 1199 tccccacttcttaatgtgcaccatgaagacgatgagccagaagacgagttctctgttctt 1258 Query: 1235 tctcgcaggtctgcacgggacgccgcagcagcacagggcaacatgtcttctgttccgaga 1294 || |||||||||||| |||| | | |||||||||||||||| | |||||| ||| | | Sbjct: 1259 tcccgcaggtctgcaagggatggcacagcagcacagggcaatctaccttctgctccaaaa 1318 Query: 1295 aatgaaaggccatacccgagcccacttcttcccccaccaccatcgacaaaaaggcctgtt 1354 | ||||||||| ||||| |||||||||||||| || |||||||| |||| ||||| ||| Sbjct: 1319 agtgaaaggccttacccaagcccacttcttcctccgccaccatcatcaaagaggccagtt 1378 Query: 1355 tacacagaggcaagcagtgtcgactatctaagtggagactcctacaaatcggaaaaagta 1414 | ||| |||||||||||||| |||||||| ||||| ||||||||||| | ||||||||| Sbjct: 1379 ttcacggaggcaagcagtgttgactatcttagtggcgactcctacaagacagaaaaagta 1438 Query: 1415 ccagatgattttgtcaacccaacagcccccacaaatatatctgcaccatcttattcaaaa 1474 ||||||| ||| | || ||||| ||||| | |||||| |||| || ||| |||||||| Sbjct: 1439 tcagatgactttattaatccaactgccccagccaatatacctgcgccgtctcattcaaaa 1498 Query: 1475 acagagacggatcacgagccaaaatatgatagcaggtcagaatatgtgcctgatgacttc 1534 ||||| ||| ||| ||||| ||||||||| |||||||| |||| ||||||||||| Sbjct: 1499 acagaaacgaatccgccgccaagttatgatagccggtcagaaagtgtgtctgatgacttc 1558 Query: 1535 ataaacccaactgcagcacccagtttttccatgccctctcgccctacgagtgagccgaat 1594 ||||||||||||||||||||||| || || ||||| ||||| |||| ||| ||| | ||| Sbjct: 1559 ataaacccaactgcagcacccagcttctctatgccttctcgtcctatgagcgagtcaaat 1618 Query: 1595 aattcatctgtgaataagcttgagagccttcctgatgatgacttcataaaccccactgca 1654 | | |||| |||| || ||||| || ||||||||||| || |||||||| || || Sbjct: 1619 cgtcctgctgtcaataggcaggagagtctacctgatgatgattttataaacccaacagct 1678 Query: 1655 cttcctggcttttcttcgtcttcaa 1679 | ||||| |||||||||||||||| Sbjct: 1679 atccctggtttttcttcgtcttcaa 1703 Score = 143 bits (72), Expect = 3e-30 Identities = 111/124 (89%) Strand = Plus / Plus Query: 1683 gtgaagatcttccaaaagctccatgggaagcgcaagctccagtttccctaccaccgcctc 1742 |||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||| Sbjct: 1728 gtgaagatcttccaaaagctccatgggaagcgcaagctccaggttccttaccgccacctc 1787 Query: 1743 ctgcaaggcatggccaaagacaacagttctttgagcaacagcatggctttcctggtggga 1802 | |||||| ||||||||||||| |||| ||| ||||||||||| ||| ||||| |||| | Sbjct: 1788 cagcaaggtatggccaaagacagcagtacttcgagcaacagcacggccttcctagtggta 1847 Query: 1803 acaa 1806 |||| Sbjct: 1848 acaa 1851 Score = 125 bits (63), Expect = 8e-25 Identities = 141/167 (84%) Strand = Plus / Plus Query: 1845 gcctttctcttaatcaaaggaacactgagaatgggaagagtgcatcggtgtcgactgcat 1904 ||||||| |||||||| ||||| || ||||||| || || |||| || |||| |||| Sbjct: 1890 gcctttcgcttaatcagaggaataccgagaatgagagaggttcatcagttccgaccgcat 1949 Query: 1905 cccgccagcccaaacatgaggatgccctttttaaggatcttgttgattttgccaagaaga 1964 | || ||| |||||| ||| ||| | ||||| ||||||||||| ||||| || ||||| | Sbjct: 1950 cacggcagaccaaacctgaagattctcttttcaaggatcttgtcgatttcgctaagaaca 2009 Query: 1965 atccgtcttctccatctaaaccagccaacagccgcaggactcgctga 2011 | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2010 aaccgtcttctccatctaaaccagccaacagccgcaggactcgctga 2056 Score = 50.1 bits (25), Expect = 0.039 Identities = 25/25 (100%) Strand = Plus / Plus Query: 204 tcagattcggatttagggtttttgg 228 ||||||||||||||||||||||||| Sbjct: 249 tcagattcggatttagggtttttgg 273 Score = 44.1 bits (22), Expect = 2.4 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2286 gctgtatatatttctccatttgacagcagtattc 2319 |||||||||||| ||||||||| ||||| ||||| Sbjct: 2354 gctgtatatattactccatttggcagcaatattc 2387
>dbj|AK073816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067D16, full insert sequence Length = 2467 Score = 954 bits (481), Expect = 0.0 Identities = 747/835 (89%), Gaps = 3/835 (0%) Strand = Plus / Plus Query: 270 aaatgtcggcggccgtggcgtgcgcagagcgggcgacgagcgacatgctgatcggccccg 329 ||||| || |||||||||||||||| ||| ||||||||||||||||||||||||| || | Sbjct: 291 aaatggcgacggccgtggcgtgcgcggagagggcgacgagcgacatgctgatcgggccgg 350 Query: 330 actgggccgtcaacatcgagctctgcgacatcatcaacatggatcccggacaagcaaagg 389 | ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 351 attgggcggtgaacatcgagctctgcgacatcatcaacatggatcccggacaagccaagg 410 Query: 390 atgcacttaagctcctaaagaagcgccttgggaataagaattcaaaagtgcaaattctgg 449 || |||| |||||||||||||| ||||| || || |||||||||||||||||||||||| Sbjct: 411 atacactcaagctcctaaagaaacgcctgggaaacaagaattcaaaagtgcaaattctga 470 Query: 450 ccctttatgtgctagagactctaagcaaaaattgcggggatattgtttaccaacagatca 509 | ||||||||||||||||||||||||||||| || |||||| |||||||||| || |||| Sbjct: 471 cgctttatgtgctagagactctaagcaaaaactgtggggatgttgtttaccagcaaatca 530 Query: 510 ttgagcgtgatatactaagcgaaatggtcaagatagtaaagaaaaagccagacttaaatg 569 ||||||| || ||| |||| |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 531 ttgagcgagacatattaagtgaaatggttaagatagtaaagaaaaagccagatttaaatg 590 Query: 570 tgcgggagaaaatattgagtctgattgacacatggcaagtagcttttgggggtccttccg 629 | |||||||||||||||||| ||||||||||||||||||| |||||||| ||| | || | Sbjct: 591 ttcgggagaaaatattgagtttgattgacacatggcaagtggcttttggaggtgcatctg 650 Query: 630 ggagatatccccagtatcacactgcgtaccaagaactcagggcggctggtgttgattttc 689 | |||||||||||||||||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 651 gcagatatccccagtatcacgctgcttaccaagaactcaggaatgctggtgttgattttc 710 Query: 690 cacctcgtgaggagaatacagttccactttttacacctcctcagactcaacctttgaggc 749 |||||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||| Sbjct: 711 cacctcgtgaggagaacacggttccactgtttacacctcctcaaactcaaccattgaggc 770 Query: 750 agccacatttatat---cctccaggtcaaagttatgaagatgtagctatacaagcttctc 806 | |||||| ||||| |||||||||||||| |||||||||| ||| ||||||||||||| Sbjct: 771 aaccacatctatatccacctccaggtcaaagctatgaagatgcagcgatacaagcttctc 830 Query: 807 tccaatctagtacccctgctgcacctcccctgagtctaagtgagattcagagcgctcgtg 866 | |||||||| ||||| |||||||| || |||||||||||||||||||||| ||||| | Sbjct: 831 ttcaatctagcgccccttctgcacctgccttgagtctaagtgagattcagagtgctcgag 890 Query: 867 gaattgtggatgtgctggatgagatgttaaatgcacttgaccacagacaccccgagggtg 926 |||||||||||||| ||||||||||||||||||| | |||||||| ||||| ||||||| Sbjct: 891 gaattgtggatgtgttggatgagatgttaaatgctttggaccacaggcaccctgagggtg 950 Query: 927 tgagagaggaggtcattgttgaccttgttgggcagtgtcgatcttaccatgctcgtgtga 986 |||| |||||||||||||||||||||||||||||||| |||||||| || | ||| || | Sbjct: 951 tgagggaggaggtcattgttgaccttgttgggcagtgccgatcttatcaaggtcgagtca 1010 Query: 987 tggatcttgttagcgatactggtgatgagagccttctgtttcaggctctaggactaaatg 1046 |||| ||||||||| |||||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 1011 tggaccttgttagcaatactggtgatgagagccttctatttcaagctctcggtttaaatg 1070 Query: 1047 atgagttgcagcgtgttcttcagcgtcatgatgacatagcaaaaggagttcctcc 1101 |||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 1071 atgaactgcagcgtgttcttcagcgtcatgatgacatcgcaaagggagtgcctcc 1125 Score = 351 bits (177), Expect = 8e-93 Identities = 468/565 (82%) Strand = Plus / Plus Query: 1115 cctgttgctggtaatgtaaaccaaggggcagcccctcctcggcctgccggggtgtcattt 1174 |||| ||||| ||||||||||| ||| ||||||||||| ||||| | ||||| |||||| Sbjct: 1142 cctgctgctgctaatgtaaaccgaggaacagcccctcctaggcctactggggtttcattt 1201 Query: 1175 tcccctcttcttaatgtacaccatgaggacgatgaaccagaagatgagttctctgtgctt 1234 ||||| ||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 1202 tccccacttcttaatgtgcaccatgaagacgatgagccagaagacgagttctctgttctt 1261 Query: 1235 tctcgcaggtctgcacgggacgccgcagcagcacagggcaacatgtcttctgttccgaga 1294 || |||||||||||| |||| | | |||||||||||||||| | |||||| ||| | | Sbjct: 1262 tcccgcaggtctgcaagggatggcacagcagcacagggcaatctaccttctgctccaaaa 1321 Query: 1295 aatgaaaggccatacccgagcccacttcttcccccaccaccatcgacaaaaaggcctgtt 1354 | ||||||||| ||||| |||||||||||||| || |||||||| |||| ||||| ||| Sbjct: 1322 agtgaaaggccttacccaagcccacttcttcctccgccaccatcatcaaagaggccagtt 1381 Query: 1355 tacacagaggcaagcagtgtcgactatctaagtggagactcctacaaatcggaaaaagta 1414 | ||| |||||||||||||| |||||||| ||||| ||||||||||| | ||||||||| Sbjct: 1382 ttcacggaggcaagcagtgttgactatcttagtggcgactcctacaagacagaaaaagta 1441 Query: 1415 ccagatgattttgtcaacccaacagcccccacaaatatatctgcaccatcttattcaaaa 1474 ||||||| ||| | || ||||| ||||| | |||||| |||| || ||| |||||||| Sbjct: 1442 tcagatgactttattaatccaactgccccagccaatatacctgcgccgtctcattcaaaa 1501 Query: 1475 acagagacggatcacgagccaaaatatgatagcaggtcagaatatgtgcctgatgacttc 1534 ||||| ||| ||| ||||| ||||||||| |||||||| |||| ||||||||||| Sbjct: 1502 acagaaacgaatccgccgccaagttatgatagccggtcagaaagtgtgtctgatgacttc 1561 Query: 1535 ataaacccaactgcagcacccagtttttccatgccctctcgccctacgagtgagccgaat 1594 ||||||||||||||||||||||| || || ||||| ||||| |||| ||| ||| | ||| Sbjct: 1562 ataaacccaactgcagcacccagcttctctatgccttctcgtcctatgagcgagtcaaat 1621 Query: 1595 aattcatctgtgaataagcttgagagccttcctgatgatgacttcataaaccccactgca 1654 | | |||| |||| || ||||| || ||||||||||| || |||||||| || || Sbjct: 1622 cgtcctgctgtcaataggcaggagagtctacctgatgatgattttataaacccaacagct 1681 Query: 1655 cttcctggcttttcttcgtcttcaa 1679 | ||||| |||||||||||||||| Sbjct: 1682 atccctggtttttcttcgtcttcaa 1706 Score = 143 bits (72), Expect = 3e-30 Identities = 111/124 (89%) Strand = Plus / Plus Query: 1683 gtgaagatcttccaaaagctccatgggaagcgcaagctccagtttccctaccaccgcctc 1742 |||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||| Sbjct: 1731 gtgaagatcttccaaaagctccatgggaagcgcaagctccaggttccttaccgccacctc 1790 Query: 1743 ctgcaaggcatggccaaagacaacagttctttgagcaacagcatggctttcctggtggga 1802 | |||||| ||||||||||||| |||| ||| ||||||||||| ||| ||||| |||| | Sbjct: 1791 cagcaaggtatggccaaagacagcagtacttcgagcaacagcacggccttcctagtggta 1850 Query: 1803 acaa 1806 |||| Sbjct: 1851 acaa 1854 Score = 125 bits (63), Expect = 8e-25 Identities = 141/167 (84%) Strand = Plus / Plus Query: 1845 gcctttctcttaatcaaaggaacactgagaatgggaagagtgcatcggtgtcgactgcat 1904 ||||||| |||||||| ||||| || ||||||| || || |||| || |||| |||| Sbjct: 1893 gcctttcgcttaatcagaggaataccgagaatgagagaggttcatcagttccgaccgcat 1952 Query: 1905 cccgccagcccaaacatgaggatgccctttttaaggatcttgttgattttgccaagaaga 1964 | || ||| |||||| ||| ||| | ||||| ||||||||||| ||||| || ||||| | Sbjct: 1953 cacggcagaccaaacctgaagattctcttttcaaggatcttgtcgatttcgctaagaaca 2012 Query: 1965 atccgtcttctccatctaaaccagccaacagccgcaggactcgctga 2011 | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2013 aaccgtcttctccatctaaaccagccaacagccgcaggactcgctga 2059 Score = 50.1 bits (25), Expect = 0.039 Identities = 25/25 (100%) Strand = Plus / Plus Query: 204 tcagattcggatttagggtttttgg 228 ||||||||||||||||||||||||| Sbjct: 252 tcagattcggatttagggtttttgg 276 Score = 44.1 bits (22), Expect = 2.4 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2286 gctgtatatatttctccatttgacagcagtattc 2319 |||||||||||| ||||||||| ||||| ||||| Sbjct: 2357 gctgtatatattactccatttggcagcaatattc 2390
>gb|AF251071.1|AF251071 Oryza sativa seed protein B32E mRNA, partial cds Length = 864 Score = 343 bits (173), Expect = 2e-90 Identities = 467/565 (82%) Strand = Plus / Plus Query: 1115 cctgttgctggtaatgtaaaccaaggggcagcccctcctcggcctgccggggtgtcattt 1174 |||| ||||| ||||||||||| ||| ||||||||||| ||||| | ||||| |||||| Sbjct: 189 cctgctgctgctaatgtaaaccgaggaacagcccctcctaggcctactggggtttcattt 248 Query: 1175 tcccctcttcttaatgtacaccatgaggacgatgaaccagaagatgagttctctgtgctt 1234 ||||| ||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 249 tccccacttcttaatgtgcaccatgaagacgatgagccagaagacgagttctctgttctt 308 Query: 1235 tctcgcaggtctgcacgggacgccgcagcagcacagggcaacatgtcttctgttccgaga 1294 || |||||||||||| |||| | | |||||||||||||||| | |||||| ||| | | Sbjct: 309 tcccgcaggtctgcaagggatggcacagcagcacagggcaatctaccttctgctccaaaa 368 Query: 1295 aatgaaaggccatacccgagcccacttcttcccccaccaccatcgacaaaaaggcctgtt 1354 | ||||||||| ||||| |||||||||||||| || |||||||| |||| ||||| || Sbjct: 369 agtgaaaggccttacccaagcccacttcttcctccgccaccatcatcaaagaggccgttt 428 Query: 1355 tacacagaggcaagcagtgtcgactatctaagtggagactcctacaaatcggaaaaagta 1414 | ||| |||||||||||||| |||||||| ||||| ||||||||||| | ||||||||| Sbjct: 429 ttcacggaggcaagcagtgttgactatcttagtggcgactcctacaagacagaaaaagta 488 Query: 1415 ccagatgattttgtcaacccaacagcccccacaaatatatctgcaccatcttattcaaaa 1474 ||||||| ||| | || ||||| ||||| | |||||| |||| || ||| |||||||| Sbjct: 489 tcagatgactttattaatccaactgccccagccaatatacctgcgccgtctcattcaaaa 548 Query: 1475 acagagacggatcacgagccaaaatatgatagcaggtcagaatatgtgcctgatgacttc 1534 ||||| ||| ||| ||||| ||||||||| |||||||| |||| ||||||||||| Sbjct: 549 acagaaacgaatccgccgccaagttatgatagccggtcagaaagtgtgtctgatgacttc 608 Query: 1535 ataaacccaactgcagcacccagtttttccatgccctctcgccctacgagtgagccgaat 1594 ||||||||||||||||||||||| || || ||||| ||||| |||| ||| ||| | ||| Sbjct: 609 ataaacccaactgcagcacccagcttctctatgccttctcgtcctatgagcgagtcaaat 668 Query: 1595 aattcatctgtgaataagcttgagagccttcctgatgatgacttcataaaccccactgca 1654 | | |||| |||| || ||||| || ||||||||||| || |||||||| || || Sbjct: 669 cgtcctgctgtcaataggcaggagagtctacctgatgatgattttataaacccaacagct 728 Query: 1655 cttcctggcttttcttcgtcttcaa 1679 | ||||| |||||||||||||||| Sbjct: 729 atccctggtttttcttcgtcttcaa 753 Score = 194 bits (98), Expect = 1e-45 Identities = 152/170 (89%) Strand = Plus / Plus Query: 932 gaggaggtcattgttgaccttgttgggcagtgtcgatcttaccatgctcgtgtgatggat 991 |||||||||||||||||||||||||||||||| |||||||| || | ||| || ||||| Sbjct: 3 gaggaggtcattgttgaccttgttgggcagtgccgatcttatcaaggtcgagtcatggac 62 Query: 992 cttgttagcgatactggtgatgagagccttctgtttcaggctctaggactaaatgatgag 1051 ||||||||| |||||||||||||||||||||| ||||| ||||| || |||||||||| Sbjct: 63 cttgttagcaatactggtgatgagagccttctatttcaagctctcggtttaaatgatgaa 122 Query: 1052 ttgcagcgtgttcttcagcgtcatgatgacatagcaaaaggagttcctcc 1101 ||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 123 ctgcagcgtgttcttcagcgtcatgatgacatcgcaaagggagtgcctcc 172 Score = 117 bits (59), Expect = 2e-22 Identities = 80/87 (91%) Strand = Plus / Plus Query: 1683 gtgaagatcttccaaaagctccatgggaagcgcaagctccagtttccctaccaccgcctc 1742 |||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||| Sbjct: 778 gtgaagatcttccaaaagctccatgggaagcgcaagctccaggttccttaccgccacctc 837 Query: 1743 ctgcaaggcatggccaaagacaacagt 1769 | |||||| ||||||||||||| |||| Sbjct: 838 cagcaaggtatggccaaagacagcagt 864
>gb|AC139173.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0058H17, complete sequence Length = 153802 Score = 228 bits (115), Expect = 8e-56 Identities = 358/439 (81%) Strand = Plus / Plus Query: 1241 aggtctgcacgggacgccgcagcagcacagggcaacatgtcttctgttccgagaaatgaa 1300 ||||||||| |||| | | |||||||||||||||| | |||||| ||| | || |||| Sbjct: 131078 aggtctgcaagggatggcacagcagcacagggcaatctaccttctgctccaaaaagtgaa 131137 Query: 1301 aggccatacccgagcccacttcttcccccaccaccatcgacaaaaaggcctgtttacaca 1360 ||||| ||||| |||||||||||||| || |||||||| |||| ||||| |||| ||| Sbjct: 131138 aggccttacccaagcccacttcttcctccgccaccatcatcaaagaggccagttttcacg 131197 Query: 1361 gaggcaagcagtgtcgactatctaagtggagactcctacaaatcggaaaaagtaccagat 1420 |||||||||||||| |||||||| ||||| ||||||||||| | ||||||||| ||||| Sbjct: 131198 gaggcaagcagtgttgactatcttagtggcgactcctacaagacagaaaaagtatcagat 131257 Query: 1421 gattttgtcaacccaacagcccccacaaatatatctgcaccatcttattcaaaaacagag 1480 || ||| | || ||||| ||||| | |||||| |||| || ||| ||||||||||||| Sbjct: 131258 gactttattaatccaactgccccagccaatatacctgcgccgtctcattcaaaaacagaa 131317 Query: 1481 acggatcacgagccaaaatatgatagcaggtcagaatatgtgcctgatgacttcataaac 1540 ||| ||| ||||| ||||||||| |||||||| |||| ||||||||||||||||| Sbjct: 131318 acgaatccgccgccaagttatgatagccggtcagaaagtgtgtctgatgacttcataaac 131377 Query: 1541 ccaactgcagcacccagtttttccatgccctctcgccctacgagtgagccgaataattca 1600 ||||||||||||||||| || || ||||| ||||| |||| ||| ||| | ||| | | Sbjct: 131378 ccaactgcagcacccagcttctctatgccttctcgtcctatgagcgagtcaaatcgtcct 131437 Query: 1601 tctgtgaataagcttgagagccttcctgatgatgacttcataaaccccactgcacttcct 1660 |||| |||| || ||||| || ||||||||||| || |||||||| || || | ||| Sbjct: 131438 gctgtcaataggcaggagagtctacctgatgatgattttataaacccaacagctatccct 131497 Query: 1661 ggcttttcttcgtcttcaa 1679 || |||||||||||||||| Sbjct: 131498 ggtttttcttcgtcttcaa 131516 Score = 182 bits (92), Expect = 4e-42 Identities = 145/162 (89%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 674 gctggtgttgattttccacctcgtgaggagaatacagttccactttttacacctcctcag 733 |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 128363 gctggtgttgattttccacctcgtgaggagaacacggttccactgtttacacctcctcaa 128422 Query: 734 actcaacctttgaggcagccacatttatat---cctccaggtcaaagttatgaagatgta 790 |||||||| |||||||| |||||| ||||| |||||||||||||| |||||||||| | Sbjct: 128423 actcaaccattgaggcaaccacatctatatccacctccaggtcaaagctatgaagatgca 128482 Query: 791 gctatacaagcttctctccaatctagtacccctgctgcacct 832 || |||||||||||||| |||||||| ||||| |||||||| Sbjct: 128483 gcgatacaagcttctcttcaatctagcgccccttctgcacct 128524 Score = 145 bits (73), Expect = 9e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 270 aaatgtcggcggccgtggcgtgcgcagagcgggcgacgagcgacatgctgatcggccccg 329 ||||| || |||||||||||||||| ||| ||||||||||||||||||||||||| || | Sbjct: 120069 aaatggcgacggccgtggcgtgcgcggagagggcgacgagcgacatgctgatcgggccgg 120128 Query: 330 actgggccgtcaacatcgagctctgcgacatcatcaacatggatcccgg 378 | ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 120129 attgggcggtgaacatcgagctctgcgacatcatcaacatggatcccgg 120177 Score = 145 bits (73), Expect = 9e-31 Identities = 106/117 (90%) Strand = Plus / Plus Query: 555 agccagacttaaatgtgcgggagaaaatattgagtctgattgacacatggcaagtagctt 614 ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 128029 agccagatttaaatgttcgggagaaaatattgagtttgattgacacatggcaagtggctt 128088 Query: 615 ttgggggtccttccgggagatatccccagtatcacactgcgtaccaagaactcaggg 671 |||| ||| | || || |||||||||||||||||| |||| |||||||||||||||| Sbjct: 128089 ttggaggtgcatctggcagatatccccagtatcacgctgcttaccaagaactcaggg 128145 Score = 143 bits (72), Expect = 3e-30 Identities = 111/124 (89%) Strand = Plus / Plus Query: 1683 gtgaagatcttccaaaagctccatgggaagcgcaagctccagtttccctaccaccgcctc 1742 |||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||| Sbjct: 131541 gtgaagatcttccaaaagctccatgggaagcgcaagctccaggttccttaccgccacctc 131600 Query: 1743 ctgcaaggcatggccaaagacaacagttctttgagcaacagcatggctttcctggtggga 1802 | |||||| ||||||||||||| |||| ||| ||||||||||| ||| ||||| |||| | Sbjct: 131601 cagcaaggtatggccaaagacagcagtacttcgagcaacagcacggccttcctagtggta 131660 Query: 1803 acaa 1806 |||| Sbjct: 131661 acaa 131664 Score = 129 bits (65), Expect = 5e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 1115 cctgttgctggtaatgtaaaccaaggggcagcccctcctcggcctgccggggtgtcattt 1174 |||| ||||| ||||||||||| ||| ||||||||||| ||||| | ||||| |||||| Sbjct: 130749 cctgctgctgctaatgtaaaccgaggaacagcccctcctaggcctactggggtttcattt 130808 Query: 1175 tcccctcttcttaatgtacaccatgaggacgatgaaccagaagatgagttctctgtgctt 1234 ||||| ||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 130809 tccccacttcttaatgtgcaccatgaagacgatgagccagaagacgagttctctgttctt 130868 Query: 1235 tctcgcagg 1243 || |||||| Sbjct: 130869 tcccgcagg 130877 Score = 125 bits (63), Expect = 8e-25 Identities = 141/167 (84%) Strand = Plus / Plus Query: 1845 gcctttctcttaatcaaaggaacactgagaatgggaagagtgcatcggtgtcgactgcat 1904 ||||||| |||||||| ||||| || ||||||| || || |||| || |||| |||| Sbjct: 131703 gcctttcgcttaatcagaggaataccgagaatgagagaggttcatcagttccgaccgcat 131762 Query: 1905 cccgccagcccaaacatgaggatgccctttttaaggatcttgttgattttgccaagaaga 1964 | || ||| |||||| ||| ||| | ||||| ||||||||||| ||||| || ||||| | Sbjct: 131763 cacggcagaccaaacctgaagattctcttttcaaggatcttgtcgatttcgctaagaaca 131822 Query: 1965 atccgtcttctccatctaaaccagccaacagccgcaggactcgctga 2011 | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131823 aaccgtcttctccatctaaaccagccaacagccgcaggactcgctga 131869 Score = 117 bits (59), Expect = 2e-22 Identities = 89/99 (89%) Strand = Plus / Plus Query: 458 gtgctagagactctaagcaaaaattgcggggatattgtttaccaacagatcattgagcgt 517 ||||||||||||||||||||||| || |||||| |||||||||| || ||||||||||| Sbjct: 122095 gtgctagagactctaagcaaaaactgtggggatgttgtttaccagcaaatcattgagcga 122154 Query: 518 gatatactaagcgaaatggtcaagatagtaaagaaaaag 556 || ||| |||| |||||||| |||||||||||||||||| Sbjct: 122155 gacatattaagtgaaatggttaagatagtaaagaaaaag 122193 Score = 107 bits (54), Expect = 2e-19 Identities = 84/94 (89%) Strand = Plus / Plus Query: 1008 gtgatgagagccttctgtttcaggctctaggactaaatgatgagttgcagcgtgttcttc 1067 |||||||||||||||| ||||| ||||| || |||||||||| ||||||||||||||| Sbjct: 130639 gtgatgagagccttctatttcaagctctcggtttaaatgatgaactgcagcgtgttcttc 130698 Query: 1068 agcgtcatgatgacatagcaaaaggagttcctcc 1101 |||||||||||||||| ||||| ||||| ||||| Sbjct: 130699 agcgtcatgatgacatcgcaaagggagtgcctcc 130732 Score = 105 bits (53), Expect = 8e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 839 agtctaagtgagattcagagcgctcgtggaattgtggatgtgctggatgagatgttaaat 898 |||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| Sbjct: 129717 agtctaagtgagattcagagtgctcgaggaattgtggatgtgttggatgagatgttaaat 129776 Query: 899 gcacttgaccacagacaccccgagg 923 || | |||||||| ||||| |||| Sbjct: 129777 gctttggaccacaggcaccctgagg 129801 Score = 103 bits (52), Expect = 3e-18 Identities = 79/88 (89%) Strand = Plus / Plus Query: 921 agggtgtgagagaggaggtcattgttgaccttgttgggcagtgtcgatcttaccatgctc 980 |||||||||| |||||||||||||||||||||||||||||||| |||||||| || | || Sbjct: 130467 agggtgtgagggaggaggtcattgttgaccttgttgggcagtgccgatcttatcaaggtc 130526 Query: 981 gtgtgatggatcttgttagcgatactgg 1008 | || ||||| ||||||||| ||||||| Sbjct: 130527 gagtcatggaccttgttagcaatactgg 130554 Score = 93.7 bits (47), Expect = 3e-15 Identities = 74/83 (89%) Strand = Plus / Plus Query: 378 gacaagcaaaggatgcacttaagctcctaaagaagcgccttgggaataagaattcaaaag 437 ||||||| |||||| |||| |||||||||||||| ||||| || || ||||||||||||| Sbjct: 121733 gacaagccaaggatacactcaagctcctaaagaaacgcctgggaaacaagaattcaaaag 121792 Query: 438 tgcaaattctggccctttatgtg 460 ||||||||||| | ||||||||| Sbjct: 121793 tgcaaattctgacgctttatgtg 121815 Score = 44.1 bits (22), Expect = 2.4 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2286 gctgtatatatttctccatttgacagcagtattc 2319 |||||||||||| ||||||||| ||||| ||||| Sbjct: 132167 gctgtatatattactccatttggcagcaatattc 132200
>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12, complete sequence Length = 173073 Score = 228 bits (115), Expect = 8e-56 Identities = 358/439 (81%) Strand = Plus / Plus Query: 1241 aggtctgcacgggacgccgcagcagcacagggcaacatgtcttctgttccgagaaatgaa 1300 ||||||||| |||| | | |||||||||||||||| | |||||| ||| | || |||| Sbjct: 29839 aggtctgcaagggatggcacagcagcacagggcaatctaccttctgctccaaaaagtgaa 29898 Query: 1301 aggccatacccgagcccacttcttcccccaccaccatcgacaaaaaggcctgtttacaca 1360 ||||| ||||| |||||||||||||| || |||||||| |||| ||||| |||| ||| Sbjct: 29899 aggccttacccaagcccacttcttcctccgccaccatcatcaaagaggccagttttcacg 29958 Query: 1361 gaggcaagcagtgtcgactatctaagtggagactcctacaaatcggaaaaagtaccagat 1420 |||||||||||||| |||||||| ||||| ||||||||||| | ||||||||| ||||| Sbjct: 29959 gaggcaagcagtgttgactatcttagtggcgactcctacaagacagaaaaagtatcagat 30018 Query: 1421 gattttgtcaacccaacagcccccacaaatatatctgcaccatcttattcaaaaacagag 1480 || ||| | || ||||| ||||| | |||||| |||| || ||| ||||||||||||| Sbjct: 30019 gactttattaatccaactgccccagccaatatacctgcgccgtctcattcaaaaacagaa 30078 Query: 1481 acggatcacgagccaaaatatgatagcaggtcagaatatgtgcctgatgacttcataaac 1540 ||| ||| ||||| ||||||||| |||||||| |||| ||||||||||||||||| Sbjct: 30079 acgaatccgccgccaagttatgatagccggtcagaaagtgtgtctgatgacttcataaac 30138 Query: 1541 ccaactgcagcacccagtttttccatgccctctcgccctacgagtgagccgaataattca 1600 ||||||||||||||||| || || ||||| ||||| |||| ||| ||| | ||| | | Sbjct: 30139 ccaactgcagcacccagcttctctatgccttctcgtcctatgagcgagtcaaatcgtcct 30198 Query: 1601 tctgtgaataagcttgagagccttcctgatgatgacttcataaaccccactgcacttcct 1660 |||| |||| || ||||| || ||||||||||| || |||||||| || || | ||| Sbjct: 30199 gctgtcaataggcaggagagtctacctgatgatgattttataaacccaacagctatccct 30258 Query: 1661 ggcttttcttcgtcttcaa 1679 || |||||||||||||||| Sbjct: 30259 ggtttttcttcgtcttcaa 30277 Score = 182 bits (92), Expect = 4e-42 Identities = 145/162 (89%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 674 gctggtgttgattttccacctcgtgaggagaatacagttccactttttacacctcctcag 733 |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 27124 gctggtgttgattttccacctcgtgaggagaacacggttccactgtttacacctcctcaa 27183 Query: 734 actcaacctttgaggcagccacatttatat---cctccaggtcaaagttatgaagatgta 790 |||||||| |||||||| |||||| ||||| |||||||||||||| |||||||||| | Sbjct: 27184 actcaaccattgaggcaaccacatctatatccacctccaggtcaaagctatgaagatgca 27243 Query: 791 gctatacaagcttctctccaatctagtacccctgctgcacct 832 || |||||||||||||| |||||||| ||||| |||||||| Sbjct: 27244 gcgatacaagcttctcttcaatctagcgccccttctgcacct 27285 Score = 145 bits (73), Expect = 9e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 270 aaatgtcggcggccgtggcgtgcgcagagcgggcgacgagcgacatgctgatcggccccg 329 ||||| || |||||||||||||||| ||| ||||||||||||||||||||||||| || | Sbjct: 18830 aaatggcgacggccgtggcgtgcgcggagagggcgacgagcgacatgctgatcgggccgg 18889 Query: 330 actgggccgtcaacatcgagctctgcgacatcatcaacatggatcccgg 378 | ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 18890 attgggcggtgaacatcgagctctgcgacatcatcaacatggatcccgg 18938 Score = 145 bits (73), Expect = 9e-31 Identities = 106/117 (90%) Strand = Plus / Plus Query: 555 agccagacttaaatgtgcgggagaaaatattgagtctgattgacacatggcaagtagctt 614 ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 26790 agccagatttaaatgttcgggagaaaatattgagtttgattgacacatggcaagtggctt 26849 Query: 615 ttgggggtccttccgggagatatccccagtatcacactgcgtaccaagaactcaggg 671 |||| ||| | || || |||||||||||||||||| |||| |||||||||||||||| Sbjct: 26850 ttggaggtgcatctggcagatatccccagtatcacgctgcttaccaagaactcaggg 26906 Score = 143 bits (72), Expect = 3e-30 Identities = 111/124 (89%) Strand = Plus / Plus Query: 1683 gtgaagatcttccaaaagctccatgggaagcgcaagctccagtttccctaccaccgcctc 1742 |||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||| Sbjct: 30302 gtgaagatcttccaaaagctccatgggaagcgcaagctccaggttccttaccgccacctc 30361 Query: 1743 ctgcaaggcatggccaaagacaacagttctttgagcaacagcatggctttcctggtggga 1802 | |||||| ||||||||||||| |||| ||| ||||||||||| ||| ||||| |||| | Sbjct: 30362 cagcaaggtatggccaaagacagcagtacttcgagcaacagcacggccttcctagtggta 30421 Query: 1803 acaa 1806 |||| Sbjct: 30422 acaa 30425 Score = 129 bits (65), Expect = 5e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 1115 cctgttgctggtaatgtaaaccaaggggcagcccctcctcggcctgccggggtgtcattt 1174 |||| ||||| ||||||||||| ||| ||||||||||| ||||| | ||||| |||||| Sbjct: 29510 cctgctgctgctaatgtaaaccgaggaacagcccctcctaggcctactggggtttcattt 29569 Query: 1175 tcccctcttcttaatgtacaccatgaggacgatgaaccagaagatgagttctctgtgctt 1234 ||||| ||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 29570 tccccacttcttaatgtgcaccatgaagacgatgagccagaagacgagttctctgttctt 29629 Query: 1235 tctcgcagg 1243 || |||||| Sbjct: 29630 tcccgcagg 29638 Score = 125 bits (63), Expect = 8e-25 Identities = 141/167 (84%) Strand = Plus / Plus Query: 1845 gcctttctcttaatcaaaggaacactgagaatgggaagagtgcatcggtgtcgactgcat 1904 ||||||| |||||||| ||||| || ||||||| || || |||| || |||| |||| Sbjct: 30464 gcctttcgcttaatcagaggaataccgagaatgagagaggttcatcagttccgaccgcat 30523 Query: 1905 cccgccagcccaaacatgaggatgccctttttaaggatcttgttgattttgccaagaaga 1964 | || ||| |||||| ||| ||| | ||||| ||||||||||| ||||| || ||||| | Sbjct: 30524 cacggcagaccaaacctgaagattctcttttcaaggatcttgtcgatttcgctaagaaca 30583 Query: 1965 atccgtcttctccatctaaaccagccaacagccgcaggactcgctga 2011 | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30584 aaccgtcttctccatctaaaccagccaacagccgcaggactcgctga 30630 Score = 117 bits (59), Expect = 2e-22 Identities = 89/99 (89%) Strand = Plus / Plus Query: 458 gtgctagagactctaagcaaaaattgcggggatattgtttaccaacagatcattgagcgt 517 ||||||||||||||||||||||| || |||||| |||||||||| || ||||||||||| Sbjct: 20856 gtgctagagactctaagcaaaaactgtggggatgttgtttaccagcaaatcattgagcga 20915 Query: 518 gatatactaagcgaaatggtcaagatagtaaagaaaaag 556 || ||| |||| |||||||| |||||||||||||||||| Sbjct: 20916 gacatattaagtgaaatggttaagatagtaaagaaaaag 20954 Score = 107 bits (54), Expect = 2e-19 Identities = 84/94 (89%) Strand = Plus / Plus Query: 1008 gtgatgagagccttctgtttcaggctctaggactaaatgatgagttgcagcgtgttcttc 1067 |||||||||||||||| ||||| ||||| || |||||||||| ||||||||||||||| Sbjct: 29400 gtgatgagagccttctatttcaagctctcggtttaaatgatgaactgcagcgtgttcttc 29459 Query: 1068 agcgtcatgatgacatagcaaaaggagttcctcc 1101 |||||||||||||||| ||||| ||||| ||||| Sbjct: 29460 agcgtcatgatgacatcgcaaagggagtgcctcc 29493 Score = 105 bits (53), Expect = 8e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 839 agtctaagtgagattcagagcgctcgtggaattgtggatgtgctggatgagatgttaaat 898 |||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| Sbjct: 28478 agtctaagtgagattcagagtgctcgaggaattgtggatgtgttggatgagatgttaaat 28537 Query: 899 gcacttgaccacagacaccccgagg 923 || | |||||||| ||||| |||| Sbjct: 28538 gctttggaccacaggcaccctgagg 28562 Score = 103 bits (52), Expect = 3e-18 Identities = 79/88 (89%) Strand = Plus / Plus Query: 921 agggtgtgagagaggaggtcattgttgaccttgttgggcagtgtcgatcttaccatgctc 980 |||||||||| |||||||||||||||||||||||||||||||| |||||||| || | || Sbjct: 29228 agggtgtgagggaggaggtcattgttgaccttgttgggcagtgccgatcttatcaaggtc 29287 Query: 981 gtgtgatggatcttgttagcgatactgg 1008 | || ||||| ||||||||| ||||||| Sbjct: 29288 gagtcatggaccttgttagcaatactgg 29315 Score = 93.7 bits (47), Expect = 3e-15 Identities = 74/83 (89%) Strand = Plus / Plus Query: 378 gacaagcaaaggatgcacttaagctcctaaagaagcgccttgggaataagaattcaaaag 437 ||||||| |||||| |||| |||||||||||||| ||||| || || ||||||||||||| Sbjct: 20494 gacaagccaaggatacactcaagctcctaaagaaacgcctgggaaacaagaattcaaaag 20553 Query: 438 tgcaaattctggccctttatgtg 460 ||||||||||| | ||||||||| Sbjct: 20554 tgcaaattctgacgctttatgtg 20576 Score = 44.1 bits (22), Expect = 2.4 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2286 gctgtatatatttctccatttgacagcagtattc 2319 |||||||||||| ||||||||| ||||| ||||| Sbjct: 30928 gctgtatatattactccatttggcagcaatattc 30961
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 228 bits (115), Expect = 8e-56 Identities = 358/439 (81%) Strand = Plus / Minus Query: 1241 aggtctgcacgggacgccgcagcagcacagggcaacatgtcttctgttccgagaaatgaa 1300 ||||||||| |||| | | |||||||||||||||| | |||||| ||| | || |||| Sbjct: 4965054 aggtctgcaagggatggcacagcagcacagggcaatctaccttctgctccaaaaagtgaa 4964995 Query: 1301 aggccatacccgagcccacttcttcccccaccaccatcgacaaaaaggcctgtttacaca 1360 ||||| ||||| |||||||||||||| || |||||||| |||| ||||| |||| ||| Sbjct: 4964994 aggccttacccaagcccacttcttcctccgccaccatcatcaaagaggccagttttcacg 4964935 Query: 1361 gaggcaagcagtgtcgactatctaagtggagactcctacaaatcggaaaaagtaccagat 1420 |||||||||||||| |||||||| ||||| ||||||||||| | ||||||||| ||||| Sbjct: 4964934 gaggcaagcagtgttgactatcttagtggcgactcctacaagacagaaaaagtatcagat 4964875 Query: 1421 gattttgtcaacccaacagcccccacaaatatatctgcaccatcttattcaaaaacagag 1480 || ||| | || ||||| ||||| | |||||| |||| || ||| ||||||||||||| Sbjct: 4964874 gactttattaatccaactgccccagccaatatacctgcgccgtctcattcaaaaacagaa 4964815 Query: 1481 acggatcacgagccaaaatatgatagcaggtcagaatatgtgcctgatgacttcataaac 1540 ||| ||| ||||| ||||||||| |||||||| |||| ||||||||||||||||| Sbjct: 4964814 acgaatccgccgccaagttatgatagccggtcagaaagtgtgtctgatgacttcataaac 4964755 Query: 1541 ccaactgcagcacccagtttttccatgccctctcgccctacgagtgagccgaataattca 1600 ||||||||||||||||| || || ||||| ||||| |||| ||| ||| | ||| | | Sbjct: 4964754 ccaactgcagcacccagcttctctatgccttctcgtcctatgagcgagtcaaatcgtcct 4964695 Query: 1601 tctgtgaataagcttgagagccttcctgatgatgacttcataaaccccactgcacttcct 1660 |||| |||| || ||||| || ||||||||||| || |||||||| || || | ||| Sbjct: 4964694 gctgtcaataggcaggagagtctacctgatgatgattttataaacccaacagctatccct 4964635 Query: 1661 ggcttttcttcgtcttcaa 1679 || |||||||||||||||| Sbjct: 4964634 ggtttttcttcgtcttcaa 4964616 Score = 182 bits (92), Expect = 4e-42 Identities = 145/162 (89%), Gaps = 3/162 (1%) Strand = Plus / Minus Query: 674 gctggtgttgattttccacctcgtgaggagaatacagttccactttttacacctcctcag 733 |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 4967769 gctggtgttgattttccacctcgtgaggagaacacggttccactgtttacacctcctcaa 4967710 Query: 734 actcaacctttgaggcagccacatttatat---cctccaggtcaaagttatgaagatgta 790 |||||||| |||||||| |||||| ||||| |||||||||||||| |||||||||| | Sbjct: 4967709 actcaaccattgaggcaaccacatctatatccacctccaggtcaaagctatgaagatgca 4967650 Query: 791 gctatacaagcttctctccaatctagtacccctgctgcacct 832 || |||||||||||||| |||||||| ||||| |||||||| Sbjct: 4967649 gcgatacaagcttctcttcaatctagcgccccttctgcacct 4967608 Score = 145 bits (73), Expect = 9e-31 Identities = 106/117 (90%) Strand = Plus / Minus Query: 555 agccagacttaaatgtgcgggagaaaatattgagtctgattgacacatggcaagtagctt 614 ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 4968103 agccagatttaaatgttcgggagaaaatattgagtttgattgacacatggcaagtggctt 4968044 Query: 615 ttgggggtccttccgggagatatccccagtatcacactgcgtaccaagaactcaggg 671 |||| ||| | || || |||||||||||||||||| |||| |||||||||||||||| Sbjct: 4968043 ttggaggtgcatctggcagatatccccagtatcacgctgcttaccaagaactcaggg 4967987 Score = 145 bits (73), Expect = 9e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 270 aaatgtcggcggccgtggcgtgcgcagagcgggcgacgagcgacatgctgatcggccccg 329 ||||| || |||||||||||||||| ||| ||||||||||||||||||||||||| || | Sbjct: 4976063 aaatggcgacggccgtggcgtgcgcggagagggcgacgagcgacatgctgatcgggccgg 4976004 Query: 330 actgggccgtcaacatcgagctctgcgacatcatcaacatggatcccgg 378 | ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 4976003 attgggcggtgaacatcgagctctgcgacatcatcaacatggatcccgg 4975955 Score = 143 bits (72), Expect = 3e-30 Identities = 111/124 (89%) Strand = Plus / Minus Query: 1683 gtgaagatcttccaaaagctccatgggaagcgcaagctccagtttccctaccaccgcctc 1742 |||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||| Sbjct: 4964591 gtgaagatcttccaaaagctccatgggaagcgcaagctccaggttccttaccgccacctc 4964532 Query: 1743 ctgcaaggcatggccaaagacaacagttctttgagcaacagcatggctttcctggtggga 1802 | |||||| ||||||||||||| |||| ||| ||||||||||| ||| ||||| |||| | Sbjct: 4964531 cagcaaggtatggccaaagacagcagtacttcgagcaacagcacggccttcctagtggta 4964472 Query: 1803 acaa 1806 |||| Sbjct: 4964471 acaa 4964468 Score = 129 bits (65), Expect = 5e-26 Identities = 113/129 (87%) Strand = Plus / Minus Query: 1115 cctgttgctggtaatgtaaaccaaggggcagcccctcctcggcctgccggggtgtcattt 1174 |||| ||||| ||||||||||| ||| ||||||||||| ||||| | ||||| |||||| Sbjct: 4965383 cctgctgctgctaatgtaaaccgaggaacagcccctcctaggcctactggggtttcattt 4965324 Query: 1175 tcccctcttcttaatgtacaccatgaggacgatgaaccagaagatgagttctctgtgctt 1234 ||||| ||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 4965323 tccccacttcttaatgtgcaccatgaagacgatgagccagaagacgagttctctgttctt 4965264 Query: 1235 tctcgcagg 1243 || |||||| Sbjct: 4965263 tcccgcagg 4965255 Score = 125 bits (63), Expect = 8e-25 Identities = 141/167 (84%) Strand = Plus / Minus Query: 1845 gcctttctcttaatcaaaggaacactgagaatgggaagagtgcatcggtgtcgactgcat 1904 ||||||| |||||||| ||||| || ||||||| || || |||| || |||| |||| Sbjct: 4964429 gcctttcgcttaatcagaggaataccgagaatgagagaggttcatcagttccgaccgcat 4964370 Query: 1905 cccgccagcccaaacatgaggatgccctttttaaggatcttgttgattttgccaagaaga 1964 | || ||| |||||| ||| ||| | ||||| ||||||||||| ||||| || ||||| | Sbjct: 4964369 cacggcagaccaaacctgaagattctcttttcaaggatcttgtcgatttcgctaagaaca 4964310 Query: 1965 atccgtcttctccatctaaaccagccaacagccgcaggactcgctga 2011 | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4964309 aaccgtcttctccatctaaaccagccaacagccgcaggactcgctga 4964263 Score = 117 bits (59), Expect = 2e-22 Identities = 89/99 (89%) Strand = Plus / Minus Query: 458 gtgctagagactctaagcaaaaattgcggggatattgtttaccaacagatcattgagcgt 517 ||||||||||||||||||||||| || |||||| |||||||||| || ||||||||||| Sbjct: 4974037 gtgctagagactctaagcaaaaactgtggggatgttgtttaccagcaaatcattgagcga 4973978 Query: 518 gatatactaagcgaaatggtcaagatagtaaagaaaaag 556 || ||| |||| |||||||| |||||||||||||||||| Sbjct: 4973977 gacatattaagtgaaatggttaagatagtaaagaaaaag 4973939 Score = 107 bits (54), Expect = 2e-19 Identities = 84/94 (89%) Strand = Plus / Minus Query: 1008 gtgatgagagccttctgtttcaggctctaggactaaatgatgagttgcagcgtgttcttc 1067 |||||||||||||||| ||||| ||||| || |||||||||| ||||||||||||||| Sbjct: 4965493 gtgatgagagccttctatttcaagctctcggtttaaatgatgaactgcagcgtgttcttc 4965434 Query: 1068 agcgtcatgatgacatagcaaaaggagttcctcc 1101 |||||||||||||||| ||||| ||||| ||||| Sbjct: 4965433 agcgtcatgatgacatcgcaaagggagtgcctcc 4965400 Score = 105 bits (53), Expect = 8e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 839 agtctaagtgagattcagagcgctcgtggaattgtggatgtgctggatgagatgttaaat 898 |||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| Sbjct: 4966415 agtctaagtgagattcagagtgctcgaggaattgtggatgtgttggatgagatgttaaat 4966356 Query: 899 gcacttgaccacagacaccccgagg 923 || | |||||||| ||||| |||| Sbjct: 4966355 gctttggaccacaggcaccctgagg 4966331 Score = 103 bits (52), Expect = 3e-18 Identities = 79/88 (89%) Strand = Plus / Minus Query: 921 agggtgtgagagaggaggtcattgttgaccttgttgggcagtgtcgatcttaccatgctc 980 |||||||||| |||||||||||||||||||||||||||||||| |||||||| || | || Sbjct: 4965665 agggtgtgagggaggaggtcattgttgaccttgttgggcagtgccgatcttatcaaggtc 4965606 Query: 981 gtgtgatggatcttgttagcgatactgg 1008 | || ||||| ||||||||| ||||||| Sbjct: 4965605 gagtcatggaccttgttagcaatactgg 4965578 Score = 93.7 bits (47), Expect = 3e-15 Identities = 74/83 (89%) Strand = Plus / Minus Query: 378 gacaagcaaaggatgcacttaagctcctaaagaagcgccttgggaataagaattcaaaag 437 ||||||| |||||| |||| |||||||||||||| ||||| || || ||||||||||||| Sbjct: 4974399 gacaagccaaggatacactcaagctcctaaagaaacgcctgggaaacaagaattcaaaag 4974340 Query: 438 tgcaaattctggccctttatgtg 460 ||||||||||| | ||||||||| Sbjct: 4974339 tgcaaattctgacgctttatgtg 4974317 Score = 44.1 bits (22), Expect = 2.4 Identities = 31/34 (91%) Strand = Plus / Minus Query: 2286 gctgtatatatttctccatttgacagcagtattc 2319 |||||||||||| ||||||||| ||||| ||||| Sbjct: 4963965 gctgtatatattactccatttggcagcaatattc 4963932
>gb|AY103867.1| Zea mays PCO080763 mRNA sequence Length = 1108 Score = 123 bits (62), Expect = 3e-24 Identities = 125/146 (85%) Strand = Plus / Plus Query: 1292 agaaatgaaaggccatacccgagcccacttcttcccccaccaccatcgacaaaaaggcct 1351 |||||||| ||||||||||| |||||||||||||| ||||||||| | | || |||||| Sbjct: 10 agaaatgagaggccatacccaagcccacttcttcctccaccaccagcatctaagaggcct 69 Query: 1352 gtttacacagaggcaagcagtgtcgactatctaagtggagactcctacaaatcggaaaaa 1411 ||||| || |||||||||||||| |||||||| ||||| ||||||||||| || || || Sbjct: 70 gtttataccgaggcaagcagtgttgactatcttagtggtgactcctacaagtcagagaag 129 Query: 1412 gtaccagatgattttgtcaacccaac 1437 || |||||||||| |||||||||| Sbjct: 130 gtttcagatgatttcatcaacccaac 155 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 1616 gagagccttcctgatgatgacttcataaaccccactgcacttcctggcttttcttcgtct 1675 |||||||| ||||| || |||||||||||||| ||||| |||||||| || || |||||| Sbjct: 334 gagagcctacctgacgacgacttcataaacccaactgctcttcctggtttctcgtcgtct 393 Query: 1676 tca 1678 ||| Sbjct: 394 tca 396 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1524 ctgatgacttcataaacccaactgca 1549 |||| ||||||||||||||||||||| Sbjct: 242 ctgacgacttcataaacccaactgca 267 Score = 44.1 bits (22), Expect = 2.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1691 cttccaaaagctccatgggaagcgcaagct 1720 |||||||| |||||||||||||| |||||| Sbjct: 421 cttccaaaggctccatgggaagcacaagct 450
>dbj|AK241764.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065205E16, full insert sequence Length = 2294 Score = 79.8 bits (40), Expect = 4e-11 Identities = 40/40 (100%) Strand = Plus / Plus Query: 1972 ttctccatctaaaccagccaacagccgcaggactcgctga 2011 |||||||||||||||||||||||||||||||||||||||| Sbjct: 2 ttctccatctaaaccagccaacagccgcaggactcgctga 41 Score = 44.1 bits (22), Expect = 2.4 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2286 gctgtatatatttctccatttgacagcagtattc 2319 |||||||||||| ||||||||| ||||| ||||| Sbjct: 339 gctgtatatattactccatttggcagcaatattc 372
>ref|NM_001051206.1| Oryza sativa (japonica cultivar-group) Os01g0825700 (Os01g0825700) mRNA, complete cds Length = 2091 Score = 61.9 bits (31), Expect = 1e-05 Identities = 58/67 (86%) Strand = Plus / Plus Query: 301 ggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgacat 360 |||||| ||| || |||| || || |||||||||||||||||| |||| |||||||||| Sbjct: 124 ggcgacaagccacctgctcatggggcccgactgggccgtcaacctcgaaatctgcgacat 183 Query: 361 catcaac 367 ||||||| Sbjct: 184 catcaac 190
>ref|NM_001049019.1| Oryza sativa (japonica cultivar-group) Os01g0229200 (Os01g0229200) mRNA, complete cds Length = 2597 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 299 cgggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgac 358 |||||||| ||||||||||| ||||| |||||||||||| ||||| ||| |||||||| Sbjct: 183 cgggcgaccagcgacatgctcatcgggcccgactgggccaagaacatggagatctgcgac 242 Query: 359 atc 361 ||| Sbjct: 243 atc 245
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 299 cgggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgac 358 |||||||| ||||||||||| ||||| |||||||||||| ||||| ||| |||||||| Sbjct: 7128418 cgggcgaccagcgacatgctcatcgggcccgactgggccaagaacatggagatctgcgac 7128477 Query: 359 atc 361 ||| Sbjct: 7128478 atc 7128480 Score = 61.9 bits (31), Expect = 1e-05 Identities = 58/67 (86%) Strand = Plus / Minus Query: 301 ggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgacat 360 |||||| ||| || |||| || || |||||||||||||||||| |||| |||||||||| Sbjct: 35311950 ggcgacaagccacctgctcatggggcccgactgggccgtcaacctcgaaatctgcgacat 35311891 Query: 361 catcaac 367 ||||||| Sbjct: 35311890 catcaac 35311884
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 299 cgggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgac 358 |||||||| ||||||||||| ||||| |||||||||||| ||||| ||| |||||||| Sbjct: 23066 cgggcgaccagcgacatgctcatcgggcccgactgggccaagaacatggagatctgcgac 23125 Query: 359 atc 361 ||| Sbjct: 23126 atc 23128
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 299 cgggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgac 358 |||||||| ||||||||||| ||||| |||||||||||| ||||| ||| |||||||| Sbjct: 115998 cgggcgaccagcgacatgctcatcgggcccgactgggccaagaacatggagatctgcgac 116057 Query: 359 atc 361 ||| Sbjct: 116058 atc 116060
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 61.9 bits (31), Expect = 1e-05 Identities = 58/67 (86%) Strand = Plus / Minus Query: 301 ggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgacat 360 |||||| ||| || |||| || || |||||||||||||||||| |||| |||||||||| Sbjct: 75811 ggcgacaagccacctgctcatggggcccgactgggccgtcaacctcgaaatctgcgacat 75752 Query: 361 catcaac 367 ||||||| Sbjct: 75751 catcaac 75745
>dbj|AK070492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048B11, full insert sequence Length = 2092 Score = 61.9 bits (31), Expect = 1e-05 Identities = 58/67 (86%) Strand = Plus / Plus Query: 301 ggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgacat 360 |||||| ||| || |||| || || |||||||||||||||||| |||| |||||||||| Sbjct: 125 ggcgacaagccacctgctcatggggcccgactgggccgtcaacctcgaaatctgcgacat 184 Query: 361 catcaac 367 ||||||| Sbjct: 185 catcaac 191
>dbj|AK066024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047G02, full insert sequence Length = 2599 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 299 cgggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgac 358 |||||||| ||||||||||| ||||| |||||||||||| ||||| ||| |||||||| Sbjct: 184 cgggcgaccagcgacatgctcatcgggcccgactgggccaagaacatggagatctgcgac 243 Query: 359 atc 361 ||| Sbjct: 244 atc 246
>ref|XM_001155060.1| PREDICTED: Pan troglodytes target of myb1, transcript variant 2 (TOM1), mRNA Length = 2350 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 165 gactgggccctcaacatggagatctgcgacatcatcaac 203
>ref|XM_001155008.1| PREDICTED: Pan troglodytes target of myb1, transcript variant 1 (TOM1), mRNA Length = 2321 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 136 gactgggccctcaacatggagatctgcgacatcatcaac 174
>gb|BC005144.1| Homo sapiens target of myb1 (chicken), mRNA (cDNA clone IMAGE:3507412), **** WARNING: chimeric clone **** Length = 3897 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 111 gactgggccctcaacatggagatctgcgacatcatcaac 149
>emb|CU013483.1| Homo sapiens TOM1, mRNA (cDNA clone IMAGE:100000452), complete cds, without stop codon, in Gateway system Length = 1510 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 104 gactgggccctcaacatggagatctgcgacatcatcaac 142
>emb|CU013195.1| Homo sapiens TOM1, mRNA (cDNA clone IMAGE:100000548), complete cds, with stop codon, in Gateway system Length = 1513 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 104 gactgggccctcaacatggagatctgcgacatcatcaac 142
>gb|BC046151.1| Homo sapiens target of myb1 (chicken), mRNA (cDNA clone MGC:57674 IMAGE:6470390), complete cds Length = 2263 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 88 gactgggccctcaacatggagatctgcgacatcatcaac 126
>gb|BC040006.1| Homo sapiens target of myb1 (chicken), mRNA (cDNA clone IMAGE:6058445), partial cds Length = 2302 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 103 gactgggccctcaacatggagatctgcgacatcatcaac 141
>gb|AY358980.1| Homo sapiens clone DNA62813 TOM1 (UNQ1844) mRNA, complete cds Length = 1300 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 145 gactgggccctcaacatggagatctgcgacatcatcaac 183
>dbj|AK097926.1| Homo sapiens cDNA FLJ40607 fis, clone THYMU2012273, highly similar to Target of myb1 Length = 2590 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 120 gactgggccctcaacatggagatctgcgacatcatcaac 158
>dbj|AK097066.1| Homo sapiens cDNA FLJ39747 fis, clone SMINT2017432, highly similar to Target of myb1 Length = 1892 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 124 gactgggccctcaacatggagatctgcgacatcatcaac 162
>emb|AL008635.1|HS510H16 Human DNA sequence from clone RP3-510H16 on chromosome 22q12.1-12.3, complete sequence Length = 102484 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 77703 gactgggccctcaacatggagatctgcgacatcatcaac 77741
>emb|CR456595.1| Homo sapiens TOM1L1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.TOM1L1) Length = 1556 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 106 gactgggccctcaacatggagatctgcgacatcatcaac 144
>emb|CR626351.1| full-length cDNA clone CS0DF002YP19 of Fetal brain of Homo sapiens (human) Length = 2177 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 134 gactgggccctcaacatggagatctgcgacatcatcaac 172
>emb|CR621107.1| full-length cDNA clone CS0DB002YE23 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 2168 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 101 gactgggccctcaacatggagatctgcgacatcatcaac 139
>emb|CR617054.1| full-length cDNA clone CS0DD005YL21 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 2263 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 117 gactgggccctcaacatggagatctgcgacatcatcaac 155
>emb|CR611082.1| full-length cDNA clone CS0DI078YP20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2252 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 144 gactgggccctcaacatggagatctgcgacatcatcaac 182
>emb|CR608920.1| full-length cDNA clone CS0DI058YO21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2227 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 105 gactgggccctcaacatggagatctgcgacatcatcaac 143
>emb|CR603578.1| full-length cDNA clone CS0DC026YK09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2214 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 101 gactgggccctcaacatggagatctgcgacatcatcaac 139
>emb|CR596343.1| full-length cDNA clone CS0DI070YG08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2299 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 144 gactgggccctcaacatggagatctgcgacatcatcaac 182
>emb|CR595971.1| full-length cDNA clone CS0DC002YD05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2286 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 140 gactgggccctcaacatggagatctgcgacatcatcaac 178
>dbj|AK026576.1| Homo sapiens cDNA: FLJ22923 fis, clone KAT06970, highly similar to HSP6973 Homo sapiens mRNA for TOM1 protein Length = 2343 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 163 gactgggccctcaacatggagatctgcgacatcatcaac 201
>emb|Z82097.1|HSF77D12 Human DNA sequence from clone CITF22-77D12 on chromosome 22, complete sequence Length = 41611 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Minus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 20467 gactgggccctcaacatggagatctgcgacatcatcaac 20429
>ref|NM_005488.1| Homo sapiens target of myb1 (chicken) (TOM1), mRNA emb|AJ006973.1|HSP6973 Homo sapiens mRNA for TOM1 protein Length = 2310 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 146 gactgggccctcaacatggagatctgcgacatcatcaac 184
>dbj|AK243668.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100089K17, full insert sequence Length = 2169 Score = 52.0 bits (26), Expect = 0.010 Identities = 47/54 (87%) Strand = Plus / Plus Query: 305 acgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgac 358 |||||||| ||||| |||||||||||||| || |||||||||| |||||||| Sbjct: 172 acgagcgagctgctgctcggccccgactggaccctcaacatcgacatctgcgac 225
>ref|NM_001064079.1| Oryza sativa (japonica cultivar-group) Os06g0332400 (Os06g0332400) mRNA, complete cds Length = 2529 Score = 52.0 bits (26), Expect = 0.010 Identities = 56/66 (84%) Strand = Plus / Plus Query: 302 gcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgacatc 361 ||||||||||| ||| ||||| ||||||||| || ||||| ||||| ||||||||||| Sbjct: 169 gcgacgagcgagtcgctcatcgggcccgactggtccctcaacctcgagatctgcgacatc 228 Query: 362 atcaac 367 ||||| Sbjct: 229 ctcaac 234
>ref|NM_001061776.1| Oryza sativa (japonica cultivar-group) Os05g0339000 (Os05g0339000) mRNA, complete cds Length = 1794 Score = 52.0 bits (26), Expect = 0.010 Identities = 47/54 (87%) Strand = Plus / Plus Query: 305 acgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgac 358 |||||||| ||||| |||||||||||||| || |||||||||| |||||||| Sbjct: 34 acgagcgagctgctgctcggccccgactggaccctcaacatcgacatctgcgac 87
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 52.0 bits (26), Expect = 0.010 Identities = 47/54 (87%) Strand = Plus / Minus Query: 305 acgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgac 358 |||||||| ||||| |||||||||||||| || |||||||||| |||||||| Sbjct: 136781 acgagcgagctgctgctcggccccgactggaccctcaacatcgacatctgcgac 136728
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 52.0 bits (26), Expect = 0.010 Identities = 56/66 (84%) Strand = Plus / Plus Query: 302 gcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgacatc 361 ||||||||||| ||| ||||| ||||||||| || ||||| ||||| ||||||||||| Sbjct: 13005890 gcgacgagcgagtcgctcatcgggcccgactggtccctcaacctcgagatctgcgacatc 13005949 Query: 362 atcaac 367 ||||| Sbjct: 13005950 ctcaac 13005955
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 52.0 bits (26), Expect = 0.010 Identities = 47/54 (87%) Strand = Plus / Minus Query: 305 acgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgac 358 |||||||| ||||| |||||||||||||| || |||||||||| |||||||| Sbjct: 15744677 acgagcgagctgctgctcggccccgactggaccctcaacatcgacatctgcgac 15744624 Score = 46.1 bits (23), Expect = 0.61 Identities = 50/59 (84%) Strand = Plus / Plus Query: 301 ggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgaca 359 |||||||||| || ||||| ||||||||||||||| ||||| ||||| | ||||||| Sbjct: 23206921 ggcgacgagccacctgctgcagggccccgactgggccatcaacctcgagatatgcgaca 23206979
>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0531C01 Length = 158574 Score = 52.0 bits (26), Expect = 0.010 Identities = 56/66 (84%) Strand = Plus / Plus Query: 302 gcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgacatc 361 ||||||||||| ||| ||||| ||||||||| || ||||| ||||| ||||||||||| Sbjct: 44691 gcgacgagcgagtcgctcatcgggcccgactggtccctcaacctcgagatctgcgacatc 44750 Query: 362 atcaac 367 ||||| Sbjct: 44751 ctcaac 44756
>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0577H07 Length = 126757 Score = 52.0 bits (26), Expect = 0.010 Identities = 56/66 (84%) Strand = Plus / Plus Query: 302 gcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgacatc 361 ||||||||||| ||| ||||| ||||||||| || ||||| ||||| ||||||||||| Sbjct: 88267 gcgacgagcgagtcgctcatcgggcccgactggtccctcaacctcgagatctgcgacatc 88326 Query: 362 atcaac 367 ||||| Sbjct: 88327 ctcaac 88332
>dbj|AK101738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061J09, full insert sequence Length = 2528 Score = 52.0 bits (26), Expect = 0.010 Identities = 56/66 (84%) Strand = Plus / Plus Query: 302 gcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgacatc 361 ||||||||||| ||| ||||| ||||||||| || ||||| ||||| ||||||||||| Sbjct: 169 gcgacgagcgagtcgctcatcgggcccgactggtccctcaacctcgagatctgcgacatc 228 Query: 362 atcaac 367 ||||| Sbjct: 229 ctcaac 234
>emb|BX815019.1|CNS0ACRB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1890 Score = 52.0 bits (26), Expect = 0.010 Identities = 71/86 (82%) Strand = Plus / Plus Query: 533 atggtcaagatagtaaagaaaaagccagacttaaatgtgcgggagaaaatattgagtctg 592 |||||||||||||| ||||| ||||||||| | | |||| ||||||| ||| | ||| | Sbjct: 503 atggtcaagatagtgaagaagaagccagacctgactgtgagggagaagatacttagttta 562 Query: 593 attgacacatggcaagtagcttttgg 618 | || |||||||||| ||||||||| Sbjct: 563 ttagatacatggcaagaagcttttgg 588
>dbj|AK058294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F02, full insert sequence Length = 2291 Score = 52.0 bits (26), Expect = 0.010 Identities = 56/66 (84%) Strand = Plus / Plus Query: 302 gcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgacatc 361 ||||||||||| ||| ||||| ||||||||| || ||||| ||||| ||||||||||| Sbjct: 193 gcgacgagcgagtcgctcatcgggcccgactggtccctcaacctcgagatctgcgacatc 252 Query: 362 atcaac 367 ||||| Sbjct: 253 ctcaac 258
>gb|AY108707.1| Zea mays PCO142137 mRNA sequence Length = 830 Score = 50.1 bits (25), Expect = 0.039 Identities = 79/97 (81%) Strand = Plus / Plus Query: 296 gagcgggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgc 355 |||||||| || ||||| ||||| |||||||| |||||||| | ||| | ||| |||| Sbjct: 269 gagcgggcaaccagcgatatgctcatcggcccggactgggcgatgaacttggagatctgt 328 Query: 356 gacatcatcaacatggatcccggacaagcaaaggatg 392 |||||| ||||| || |||||||||||||| |||| Sbjct: 329 gacatcctcaaccgcgaacccggacaagcaaaagatg 365 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 533 atggtcaagatagtaaagaaaa 554 |||||||||||||||||||||| Sbjct: 506 atggtcaagatagtaaagaaaa 527
>gb|DQ287691.1| Glycine max VHS and GAT domain protein mRNA, complete cds Length = 2258 Score = 48.1 bits (24), Expect = 0.15 Identities = 48/56 (85%) Strand = Plus / Plus Query: 305 acgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgacat 360 |||||||||||||| || || || || |||||| | ||||||||| |||||||||| Sbjct: 182 acgagcgacatgctcatagggcctgattgggccatgaacatcgagatctgcgacat 237
>ref|NM_001062365.1| Oryza sativa (japonica cultivar-group) Os05g0475300 (Os05g0475300) mRNA, complete cds Length = 2239 Score = 46.1 bits (23), Expect = 0.61 Identities = 50/59 (84%) Strand = Plus / Plus Query: 301 ggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgaca 359 |||||||||| || ||||| ||||||||||||||| ||||| ||||| | ||||||| Sbjct: 142 ggcgacgagccacctgctgcagggccccgactgggccatcaacctcgagatatgcgaca 200
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 46.1 bits (23), Expect = 0.61 Identities = 50/59 (84%) Strand = Plus / Plus Query: 301 ggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgaca 359 |||||||||| || ||||| ||||||||||||||| ||||| ||||| | ||||||| Sbjct: 138696 ggcgacgagccacctgctgcagggccccgactgggccatcaacctcgagatatgcgaca 138754
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 46.1 bits (23), Expect = 0.61 Identities = 50/59 (84%) Strand = Plus / Plus Query: 301 ggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgaca 359 |||||||||| || ||||| ||||||||||||||| ||||| ||||| | ||||||| Sbjct: 32327 ggcgacgagccacctgctgcagggccccgactgggccatcaacctcgagatatgcgaca 32385
>emb|CR926028.1| Pongo pygmaeus mRNA; cDNA DKFZp459G2220 (from clone DKFZp459G2220) Length = 2312 Score = 46.1 bits (23), Expect = 0.61 Identities = 35/39 (89%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| |||| |||||||||||| Sbjct: 130 gactgggccctcaacatggagatctgtgacatcatcaac 168
>emb|CR859553.1| Pongo pygmaeus mRNA; cDNA DKFZp459D2212 (from clone DKFZp459D2212) Length = 2318 Score = 46.1 bits (23), Expect = 0.61 Identities = 35/39 (89%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaac 367 ||||||||| ||||||| ||| |||| |||||||||||| Sbjct: 145 gactgggccctcaacatggagatctgtgacatcatcaac 183
>dbj|AK065069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K05, full insert sequence Length = 2241 Score = 46.1 bits (23), Expect = 0.61 Identities = 50/59 (84%) Strand = Plus / Plus Query: 301 ggcgacgagcgacatgctgatcggccccgactgggccgtcaacatcgagctctgcgaca 359 |||||||||| || ||||| ||||||||||||||| ||||| ||||| | ||||||| Sbjct: 144 ggcgacgagccacctgctgcagggccccgactgggccatcaacctcgagatatgcgaca 202
>ref|XM_001158965.1| PREDICTED: Pan troglodytes BTE-binding protein 4 (KLF16), mRNA Length = 578 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 atgtcggcggccgtggcgtgcg 293 |||||||||||||||||||||| Sbjct: 69 atgtcggcggccgtggcgtgcg 90
>gb|AC183615.2| Pan troglodytes BAC clone CH251-141A9 from chromosome 7, complete sequence Length = 205915 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1263 cagcacagggcaacatgtcttc 1284 |||||||||||||||||||||| Sbjct: 45727 cagcacagggcaacatgtcttc 45706
>gb|AC183673.2| Pan troglodytes BAC clone CH251-540O10 from chromosome 1, complete sequence Length = 185717 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 890 atgttaaatgcacttgaccaca 911 |||||||||||||||||||||| Sbjct: 142940 atgttaaatgcacttgaccaca 142961
>ref|NM_106348.3| Arabidopsis thaliana protein transporter (AT1G76970) mRNA, complete cds Length = 1761 Score = 44.1 bits (22), Expect = 2.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1052 ttgcagcgtgttcttcagcgtcatgatgacatagcaaa 1089 ||||||| ||||||||||||||| ||||| || ||||| Sbjct: 987 ttgcagcatgttcttcagcgtcacgatgatatcgcaaa 1024
>gb|AC147017.4| Pan troglodytes BAC clone RP43-77F5 from 7, complete sequence Length = 178288 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1263 cagcacagggcaacatgtcttc 1284 |||||||||||||||||||||| Sbjct: 18082 cagcacagggcaacatgtcttc 18061
>gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome 8, complete sequence Length = 219597 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1650 ctgcacttcctggcttttcttc 1671 |||||||||||||||||||||| Sbjct: 170785 ctgcacttcctggcttttcttc 170764
>gb|AC073336.6| Homo sapiens BAC clone RP11-476H24 from 7, complete sequence Length = 166261 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1263 cagcacagggcaacatgtcttc 1284 |||||||||||||||||||||| Sbjct: 18287 cagcacagggcaacatgtcttc 18266
>ref|NM_031918.2| Homo sapiens Kruppel-like factor 16 (KLF16), mRNA Length = 2888 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 atgtcggcggccgtggcgtgcg 293 |||||||||||||||||||||| Sbjct: 69 atgtcggcggccgtggcgtgcg 90
>gb|AC002291.1| Arabidopsis thaliana chromosome I BAC F22K20 genomic sequence, complete sequence Length = 96642 Score = 44.1 bits (22), Expect = 2.4 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1052 ttgcagcgtgttcttcagcgtcatgatgacatagcaaa 1089 ||||||| ||||||||||||||| ||||| || ||||| Sbjct: 42460 ttgcagcatgttcttcagcgtcacgatgatatcgcaaa 42423
>gb|BT010453.1| Arabidopsis thaliana At1g76970 mRNA, complete cds Length = 1341 Score = 44.1 bits (22), Expect = 2.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1052 ttgcagcgtgttcttcagcgtcatgatgacatagcaaa 1089 ||||||| ||||||||||||||| ||||| || ||||| Sbjct: 742 ttgcagcatgttcttcagcgtcacgatgatatcgcaaa 779
>gb|AC012615.4| Homo sapiens chromosome 19 clone CTB-31O20, complete sequence Length = 149252 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 272 atgtcggcggccgtggcgtgcg 293 |||||||||||||||||||||| Sbjct: 55944 atgtcggcggccgtggcgtgcg 55923
>dbj|AK221351.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-27-C03 Length = 1605 Score = 44.1 bits (22), Expect = 2.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1052 ttgcagcgtgttcttcagcgtcatgatgacatagcaaa 1089 ||||||| ||||||||||||||| ||||| || ||||| Sbjct: 859 ttgcagcatgttcttcagcgtcacgatgatatcgcaaa 896
>gb|AC084393.20| Homo sapiens 12q BAC RP11-453E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182489 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 890 atgttaaatgcacttgaccaca 911 |||||||||||||||||||||| Sbjct: 1979 atgttaaatgcacttgaccaca 2000
>emb|AL365178.10| Human DNA sequence from clone RP11-454L1 on chromosome 1 Contains the 3' end of the CR1L gene for complement component (3b/4b) receptor 1-like and the 5' end of the MCP gene for membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen), complete sequence Length = 71858 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 890 atgttaaatgcacttgaccaca 911 |||||||||||||||||||||| Sbjct: 34429 atgttaaatgcacttgaccaca 34450
>emb|AL359091.10| Human DNA sequence from clone RP11-339B21 on chromosome 9 Contains a novel gene (FLJ21673), novel gene (CLONE24922), the COQ4 gene for coenzyme Q4 homolog (yeast), a novel gene similar to thymosin, beta 4, X chromosome (TMSB4X0), the SLC27A4 gene for solute carrier family 27 (fatty acid transporter), member 4 (FATP4), a novel gene (2GC2668), the gene for cerebral cell adhesion molecule (CerCAM), a pseudogene similar to part of a novel gene (FLJ36874), the 5' end of the ODF2 gene for outer dense fiber of sperm tails 2 (ODF84, ODF2/1, ODF2/2, MGC9034) and six CpG islands, complete sequence Length = 184444 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 932 gaggaggtcattgttgaccttg 953 |||||||||||||||||||||| Sbjct: 3651 gaggaggtcattgttgaccttg 3672
>emb|AL137789.11| Human DNA sequence from clone RP11-57I17 on chromosome 1q32.1-32.3 Contains the 3' end of the CR1 gene for complement component (3b/4b) receptor 1, including Knops blood group system, a membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) (MCP) pseudogene and the 5' end of the CR1L gene for complement component (3b/4b) receptor 1-like, complete sequence Length = 145325 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 890 atgttaaatgcacttgaccaca 911 |||||||||||||||||||||| Sbjct: 71008 atgttaaatgcacttgaccaca 71029
>gb|AF327440.1|AF327440 Homo sapiens BTE-binding protein 4 (BTEB4) mRNA, complete cds Length = 1133 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 atgtcggcggccgtggcgtgcg 293 |||||||||||||||||||||| Sbjct: 1 atgtcggcggccgtggcgtgcg 22
>emb|BX815173.1|CNS0ACTE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1497 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 533 atggtcaagatagtaaagaaaaagcc 558 |||||||||||||| ||||||||||| Sbjct: 313 atggtcaagatagtgaagaaaaagcc 338 Score = 44.1 bits (22), Expect = 2.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1052 ttgcagcgtgttcttcagcgtcatgatgacatagcaaa 1089 ||||||| ||||||||||||||| ||||| || ||||| Sbjct: 791 ttgcagcatgttcttcagcgtcacgatgatatcgcaaa 828
>emb|BX816654.1|CNS0ADCS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZF03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 44.1 bits (22), Expect = 2.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1052 ttgcagcgtgttcttcagcgtcatgatgacatagcaaa 1089 ||||||| ||||||||||||||| ||||| || ||||| Sbjct: 258 ttgcagcatgttcttcagcgtcacgatgatatcgcaaa 295
>ref|NM_001008365.1| Rattus norvegicus target of myb1 homolog (chicken) (Tom1), mRNA gb|BC083873.1| Rattus norvegicus target of myb1 homolog (chicken), mRNA (cDNA clone MGC:95142 IMAGE:7128979), complete cds Length = 2244 Score = 44.1 bits (22), Expect = 2.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 329 gactgggccgtcaacatcgagctctgcgacatcatcaa 366 ||||||||| ||||||| ||| |||| ||||||||||| Sbjct: 116 gactgggccctcaacatggagatctgtgacatcatcaa 153
>gb|AC006312.8|AC006312 Homo sapiens chromosome 9, clone hRPK.401_G_18, complete sequence Length = 207656 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 932 gaggaggtcattgttgaccttg 953 |||||||||||||||||||||| Sbjct: 140409 gaggaggtcattgttgaccttg 140388
>ref|NM_001078836.1| Xenopus tropicalis hypothetical protein MGC145863 (MGC145863), mRNA gb|BC121358.1| Xenopus tropicalis hypothetical protein MGC145863, mRNA (cDNA clone MGC:145863 IMAGE:7653931), complete cds Length = 2772 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 871 tgtggatgtgctggatgagat 891 ||||||||||||||||||||| Sbjct: 670 tgtggatgtgctggatgagat 690
>gb|AY739096.1| Takifugu rubripes frRHCE, frSMP1, frNPD014, and frP29 genes, complete sequence; frRUNX3 (frRUNX3) gene, complete cds; and frCLIC4, frSRRM1, frMTMR9L, frLCK, frHD, and frKCP3 genes, complete sequence Length = 271832 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1139 ggggcagcccctcctcggcct 1159 ||||||||||||||||||||| Sbjct: 17226 ggggcagcccctcctcggcct 17246
>ref|XM_865316.1| PREDICTED: Bos taurus similar to Casitas B-lineage lymphoma b (LOC614012), mRNA Length = 527 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1248 cacgggacgccgcagcagcac 1268 ||||||||||||||||||||| Sbjct: 37 cacgggacgccgcagcagcac 17
>gb|AC124416.4| Mus musculus BAC clone RP24-308I2 from chromosome 9, complete sequence Length = 184879 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1131 taaaccaaggggcagcccctc 1151 ||||||||||||||||||||| Sbjct: 69662 taaaccaaggggcagcccctc 69642
>gb|AC109441.3| Homo sapiens chromosome 5 clone CTC-269P20, complete sequence Length = 89908 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1214 gaagatgagttctctgtgctt 1234 ||||||||||||||||||||| Sbjct: 46913 gaagatgagttctctgtgctt 46933
>gb|AC148690.1| Macaca mulatta Major Histocompatibility Complex BAC MMU227F07, complete sequence Length = 202515 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2138 acattggcagttatttgattt 2158 ||||||||||||||||||||| Sbjct: 15847 acattggcagttatttgattt 15827 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2138 acattggcagttatttgattt 2158 ||||||||||||||||||||| Sbjct: 107612 acattggcagttatttgattt 107592
>gb|AC148682.1| Macaca mulatta Major Histocompatibility Complex MMU151L13, complete sequence Length = 199819 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2138 acattggcagttatttgattt 2158 ||||||||||||||||||||| Sbjct: 119899 acattggcagttatttgattt 119879
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gtgcaaattctggccctttat 457 ||||||||||||||||||||| Sbjct: 18342812 gtgcaaattctggccctttat 18342832
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2138 acattggcagttatttgattt 2158 ||||||||||||||||||||| Sbjct: 3145864 acattggcagttatttgattt 3145884
>gb|AC010584.5| Homo sapiens chromosome 5 clone CTC-218H9, complete sequence Length = 113216 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1214 gaagatgagttctctgtgctt 1234 ||||||||||||||||||||| Sbjct: 8438 gaagatgagttctctgtgctt 8418
>emb|BX005227.12| Zebrafish DNA sequence from clone CH211-286C23 in linkage group 21, complete sequence Length = 187709 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2021 gttccagtcatgtaacacaca 2041 ||||||||||||||||||||| Sbjct: 78370 gttccagtcatgtaacacaca 78350
>gb|AC092644.3| Homo sapiens BAC clone RP11-394A2 from 2, complete sequence Length = 171099 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2358 agttaacagtttattttcaac 2378 ||||||||||||||||||||| Sbjct: 36782 agttaacagtttattttcaac 36802
>gb|BC033260.1| Homo sapiens, clone IMAGE:5459012, mRNA Length = 2857 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1734 caccgcctcctgcaaggcatg 1754 ||||||||||||||||||||| Sbjct: 82 caccgcctcctgcaaggcatg 62
>dbj|AP004266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F10 Length = 153929 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gtgcaaattctggccctttat 457 ||||||||||||||||||||| Sbjct: 72307 gtgcaaattctggccctttat 72327
>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105 Length = 340000 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1734 caccgcctcctgcaaggcatg 1754 ||||||||||||||||||||| Sbjct: 146021 caccgcctcctgcaaggcatg 146041
>emb|BX284109.8| Mouse DNA sequence from clone RP23-247K12 on chromosome X, complete sequence Length = 121039 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 536 gtcaagatagtaaagaaaaag 556 ||||||||||||||||||||| Sbjct: 80612 gtcaagatagtaaagaaaaag 80592
>gb|AC139108.3| Mus musculus BAC clone RP23-93M1 from 9, complete sequence Length = 269739 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1131 taaaccaaggggcagcccctc 1151 ||||||||||||||||||||| Sbjct: 955 taaaccaaggggcagcccctc 975
>gb|U07407.1|APU07407 Acanthamoeba polyphaga BCM:0173:16 ATCC 50371 18S rRNA gene Length = 2287 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2048 agttgccggcctgctggtttt 2068 ||||||||||||||||||||| Sbjct: 287 agttgccggcctgctggtttt 267
>dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1559F8, MX1-D21S171 region, complete sequence Length = 145762 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1734 caccgcctcctgcaaggcatg 1754 ||||||||||||||||||||| Sbjct: 77069 caccgcctcctgcaaggcatg 77089
>dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiesterase, complete cds Length = 125000 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1734 caccgcctcctgcaaggcatg 1754 ||||||||||||||||||||| Sbjct: 454 caccgcctcctgcaaggcatg 474 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 456,933,050 Number of extensions: 23671094 Number of successful extensions: 115175 Number of sequences better than 10.0: 101 Number of HSP's gapped: 115158 Number of HSP's successfully gapped: 179 Length of query: 2482 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2459 Effective length of database: 18,503,978,556 Effective search space: 45501283269204 Effective search space used: 45501283269204 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
