| Clone Name | FLbaf40c07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100199:Os02g0465400 | 769 | 0.0 | 2 | AK112105:Os01g0354200 | 110 | 4e-24 | 3 | Os09g0565600:Os09g0565600 | 102 | 1e-21 | 4 | Os10g0575500:Os10g0575500 | 30 | 5.3 | 5 | AK122122:Os01g0503400 | 30 | 5.3 | 6 | AK072201:Os01g0503400 | 30 | 5.3 | 7 | AK068641:Os01g0503400 | 30 | 5.3 | 8 | AK068118:Os01g0503400 | 30 | 5.3 | 9 | AK063444:Os09g0467100 | 30 | 6.9 |
|---|
>AK100199:Os02g0465400 | Length = 450 Score = 769 bits (1985), Expect = 0.0 Identities = 355/431 (82%), Positives = 377/431 (87%) Frame = +1 Query: 94 KTAHSPLLTYASMVTLLSLCPPFVILLWYTMVHADGSVLQIYEHLRDHGILEGLKAIWPA 273 KT HS L+TYASM++LLSLCPPFVILLWYTMVHADGSV++ YEHLR+HG+LEGLKAIWP Sbjct: 20 KTVHSALVTYASMLSLLSLCPPFVILLWYTMVHADGSVVRAYEHLREHGVLEGLKAIWPM 79 Query: 274 PTLVAGKIIXXXXXXXXXXXXXXPGKRFEGPISPSGNVPVYKANGXXXXXXXXXXXXXXW 453 PT+ A KII PGKRFEGP+SPSGNVPVYKANG W Sbjct: 80 PTMAAWKIIFGFGLFEAALQLLLPGKRFEGPVSPSGNVPVYKANGLQAYAVTLITYLSLW 139 Query: 454 WFGIFNPAIVYDHLGEIYSALVFGSLVFCLLLYIKGHVAPSSSDSGSAGNVIIDFYWGME 633 WFGIFNPAIVYDHLGEIYSALVFGS VFC+ LYIKGH+APSSSDSGS+GNVIIDFYWGME Sbjct: 140 WFGIFNPAIVYDHLGEIYSALVFGSFVFCIFLYIKGHLAPSSSDSGSSGNVIIDFYWGME 199 Query: 634 LYPRIGKHFDIKVFTNCRFGMMSWAVLAVTYCIKQYEMNGRVADSMLVNTALMLIYITKF 813 LYPRIGKHFDIKVFTNCRFGMMSWAVLAVTYCIKQYEMNGRVADSMLVNTALMLIY+TKF Sbjct: 200 LYPRIGKHFDIKVFTNCRFGMMSWAVLAVTYCIKQYEMNGRVADSMLVNTALMLIYVTKF 259 Query: 814 FWWESGYWCTMDIAHDRAGFYICWGCLVWVPSIYTSPGMYLVNHPVNLGPQLALSILLAG 993 FWWESGYWCTMDIAHDRAGFYICWGCLVWVPSIYTSPGMYLVNHPVNLGPQLALSILLAG Sbjct: 260 FWWESGYWCTMDIAHDRAGFYICWGCLVWVPSIYTSPGMYLVNHPVNLGPQLALSILLAG 319 Query: 994 ILCIYINYDCDRQRQEFRRTNGKATVWGKAPSKIIASYQTTKGETKTSLLLTSGWWGFSR 1173 ILCIYINYDCDRQRQEFRRTNGK ++WGKAPSKI+ASYQTT GETK+SLLLTSGWWG SR Sbjct: 320 ILCIYINYDCDRQRQEFRRTNGKCSIWGKAPSKIVASYQTTNGETKSSLLLTSGWWGLSR 379 Query: 1174 HFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTIXXXXXXXXXXXXCSTKYGKYWKMYCN 1353 HFHY PEIL+AFFWTVPALF HF+PYFYVIFLTI CS+KYGKYWKMYCN Sbjct: 380 HFHYVPEILSAFFWTVPALFDHFLPYFYVIFLTILLFDRAKRDDDRCSSKYGKYWKMYCN 439 Query: 1354 RVPYRVVPGIY 1386 +VP RV+PGIY Sbjct: 440 KVPCRVIPGIY 450
>AK112105:Os01g0354200 | Length = 322 Score = 110 bits (274), Expect = 4e-24 Identities = 84/300 (28%), Positives = 136/300 (45%), Gaps = 6/300 (2%) Frame = +1 Query: 343 PGKRFEGPISPSGNVPVYKANGXXXXXXXXXXXXXXWWFGIFNPAIVYDHLGEIYSALVF 522 PGK G + P + Y+ NG + G +P ++ D E+ SA Sbjct: 35 PGKLVPGAVLPDSSRLHYRCNGLVSLLLLLVLSALGVYMGWMSPTVIADRGIELLSATFI 94 Query: 523 GSLVFCLLLYIKG---HVAPSSSDSGSAGNVIIDFYWGMELYPRIGKHF---DIKVFTNC 684 S++ LLY G H SS +GN I D++ G++L P HF D+K F Sbjct: 95 FSVIVTFLLYYSGLRSHHKSSSLKPHVSGNFIQDWWLGVQLNP----HFMGVDLKFFF-V 149 Query: 685 RFGMMSWAVLAVTYCIKQYEMNGRVADSMLVNTALMLIYITKFFWWESGYWCTMDIAHDR 864 R GMM+W + ++ K Y + G S+++ YI +F E T DI +R Sbjct: 150 RAGMMAWLFINLSLFAKSY-LAGSANLSVILYQFFCAWYIVDYFVHEELMTSTWDIIAER 208 Query: 865 AGFYICWGCLVWVPSIYTSPGMYLVNHPVNLGPQLALSILLAGILCIYINYDCDRQRQEF 1044 GF + +G LV++P +T G +L+ + V L A ++ + ++Q+ F Sbjct: 209 LGFMLVFGDLVFIPFTFTIQGWWLLRNNVELSLLAATVNCFIFVIGYLVFRGANKQKHVF 268 Query: 1045 RRTNGKATVWGKAPSKIIASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVP 1224 +++ KA +WGK P + LL SG+WG +RH +Y +IL A +++P Sbjct: 269 KKSP-KALIWGKTPKLVGGK------------LLVSGYWGIARHCNYLGDILLALSFSLP 315
>Os09g0565600:Os09g0565600 | Length = 332 Score = 102 bits (253), Expect = 1e-21 Identities = 93/354 (26%), Positives = 140/354 (39%), Gaps = 6/354 (1%) Frame = +1 Query: 343 PGKRFEGPISPSGNVPVYKANGXXXXXXXXXXXXXXWWFGIFNPAIVYDHLGEIYSALVF 522 PGK G + P + Y+ NG + G +P ++ D E+ S Sbjct: 35 PGKLVPGAVLPDSSRLHYRCNGLLSLLLLLVLSALGVYMGWMSPTVIADRGIELLSTTFI 94 Query: 523 GSLVFCLLLYIKG---HVAPSSSDSGSAGNVIIDFYWGMELYPRIGKHF---DIKVFTNC 684 S++ LLY G H SS GN I D++ G++L P HF D+K F Sbjct: 95 FSVIVTFLLYYSGLRSHHKSSSLKPHITGNFIQDWWLGVQLNP----HFMGVDLKFFF-V 149 Query: 685 RFGMMSWAVLAVTYCIKQYEMNGRVADSMLVNTALMLIYITKFFWWESGYWCTMDIAHDR 864 R GMM+W + ++ K Y + G S+++ YI +F E T DI +R Sbjct: 150 RAGMMAWLFINLSLFAKSY-LAGSANLSVILYQFFCAWYIVDYFVHEEFMTSTWDIIAER 208 Query: 865 AGFYICWGCLVWVPSIYTSPGMYLVNHPVNLGPQLALSILLAGILCIYINYDCDRQRQEF 1044 GF + +G LV++P +T Y L + AG L + Sbjct: 209 LGFMLVFGDLVFIPFTFTIQSAY----------PLPKDLAGAGEL------------GQK 246 Query: 1045 RRTNGKATVWGKAPSKIIASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVP 1224 R+ K +V GE G +RH +Y +IL A +++P Sbjct: 247 RKNTSKESV----------------GE------------GIARHCNYLGDILLALSFSLP 278 Query: 1225 ALFTHFMPYFYVIFLTIXXXXXXXXXXXXCSTKYGKYWKMYCNRVPYRVVPGIY 1386 + +PYFY +L I CS KY + W YC VP+R+ P +Y Sbjct: 279 CGTSSVIPYFYPTYLFILLIWRERRDEARCSEKYKEIWVEYCKLVPWRIFPYVY 332
>Os10g0575500:Os10g0575500 | Length = 456 Score = 30.0 bits (66), Expect = 5.3 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Frame = -3 Query: 473 GLKIPNHQRLR*VSKVTAYASKPFAL*TGTLPEGEMGPSKRFPGRSSCRAASKRA---KP 303 G + P +R + + A + P + P GP+ R AAS +P Sbjct: 239 GGRPPGRRRCQPLHAPVASVAAPLQTAPPSSPSSSPGPATPRASRQGTEAASLLPLPRRP 298 Query: 302 RMIFPATRVGAGQMALSPSRIPW--SRRCS*IC 210 R P +R+G G LSP P RRC C Sbjct: 299 RSPPPFSRIGKGASPLSPPPFPLFPPRRCHPPC 331
>AK122122:Os01g0503400 | Length = 325 Score = 30.0 bits (66), Expect = 5.3 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = +3 Query: 654 ALRYQSLHKLPFWDDVLGCSCCNLL 728 AL Y L +PFW VL C C L Sbjct: 106 ALAYNMLLHIPFWAGVLACGACTFL 130
>AK072201:Os01g0503400 | Length = 210 Score = 30.0 bits (66), Expect = 5.3 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = +3 Query: 654 ALRYQSLHKLPFWDDVLGCSCCNLL 728 AL Y L +PFW VL C C L Sbjct: 171 ALAYNMLLHIPFWAGVLACGACTFL 195
>AK068641:Os01g0503400 | Length = 390 Score = 30.0 bits (66), Expect = 5.3 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = +3 Query: 654 ALRYQSLHKLPFWDDVLGCSCCNLL 728 AL Y L +PFW VL C C L Sbjct: 171 ALAYNMLLHIPFWAGVLACGACTFL 195
>AK068118:Os01g0503400 | Length = 550 Score = 30.0 bits (66), Expect = 5.3 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = +3 Query: 654 ALRYQSLHKLPFWDDVLGCSCCNLL 728 AL Y L +PFW VL C C L Sbjct: 171 ALAYNMLLHIPFWAGVLACGACTFL 195
>AK063444:Os09g0467100 | Length = 403 Score = 29.6 bits (65), Expect = 6.9 Identities = 25/72 (34%), Positives = 30/72 (41%) Frame = -3 Query: 461 PNHQRLR*VSKVTAYASKPFAL*TGTLPEGEMGPSKRFPGRSSCRAASKRAKPRMIFPAT 282 P+ RLR + K + AS F PS RFP S A+S R P + A Sbjct: 7 PSALRLRGLPKASLPASSSFP------------PSARFPHHLSMSASSSRRPPPLAATAA 54 Query: 281 RVGAGQMALSPS 246 G G A SPS Sbjct: 55 AAGTGSGA-SPS 65 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 46,508,543 Number of extensions: 1062550 Number of successful extensions: 2476 Number of sequences better than 10.0: 9 Number of HSP's gapped: 2475 Number of HSP's successfully gapped: 9 Length of query: 575 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 469 Effective length of database: 11,155,509 Effective search space: 5231933721 Effective search space used: 5231933721 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)