ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf40a13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os07g0645000:Os07g0645000 | 325 | 4e-89 | 2 | AK101386:Os08g0459300 | 35 | 0.095 | 3 | AK060409:Os08g0459300 | 35 | 0.095 | 4 | AK103950:Os12g0102200 | 32 | 0.81 | 5 | AK071448:Os11g0102600 | 32 | 0.81 | 6 | AF280060:Os11g0102600 | 32 | 0.81 | 7 | Os01g0807400:Os01g0807400 | 32 | 1.1 | 8 | Os01g0328100:Os01g0328100 | 30 | 2.3 | 9 | Os06g0287000:Os06g0287000 | 30 | 3.1 | 10 | AK109808:Os01g0176700 | 30 | 3.1 | 11 | AK111205: | 30 | 4.0 | 12 | AK121036:Os07g0243200 | 30 | 4.0 | 13 | AK111184: | 29 | 5.2 | 14 | AK109924:Os11g0538400 | 29 | 5.2 | 15 | AK106901:Os12g0136300 | 29 | 5.2 | 16 | AY344495:Os01g0625300 | 29 | 6.8 | 17 | AK119538:Os03g0108300 | 29 | 6.8 | 18 | AK069479:Os01g0625300 | 29 | 6.8 | 19 | AK068053:Os01g0764600 | 29 | 6.8 | 20 | AK121578:Os11g0205500 | 28 | 8.9 | 21 | AK109110:Os02g0708000 | 28 | 8.9 | 22 | AK073544:Os01g0895300 | 28 | 8.9 |
|---|
>Os07g0645000:Os07g0645000 | Length = 212 Score = 325 bits (833), Expect = 4e-89 Identities = 156/187 (83%), Positives = 170/187 (90%) Frame = +3 Query: 132 MDSRAAIFCFLAIASSLLHPARSDGDDNQLLKGINSYRASLKVPALTENSNADCLAEQLA 311 MDSR ++ CFL +ASSLLH ARSDG D+QLLKGINSYRASLKVPAL+EN NA CLAEQLA Sbjct: 1 MDSRISLVCFLVLASSLLHCARSDGSDSQLLKGINSYRASLKVPALSENKNAACLAEQLA 60 Query: 312 KKFKGQPCTNTTGANTVPGTEPQFPDYPKFLDRCHLNASVTEDGQVMPACVPGLVADVVL 491 ++FK QPCTNTTGANTVPGTE QFPDYPK+LD CHLNASVT DGQVMPACVPGLV DVVL Sbjct: 61 QQFKDQPCTNTTGANTVPGTEQQFPDYPKYLDHCHLNASVTGDGQVMPACVPGLVPDVVL 120 Query: 492 TNYTKSQYNRFLNDTKYSGVGIGNEGDWVVVVLSTSTDSGDYSPAPPGSNWAPSVQPFSW 671 TNYTKSQYN++LNDTK+SGVGI NEGDWVVVVLSTS+ SGDYSPAPPGSNWAPSV PF+ Sbjct: 121 TNYTKSQYNQYLNDTKFSGVGIANEGDWVVVVLSTSSGSGDYSPAPPGSNWAPSVHPFNQ 180 Query: 672 MILSLVG 692 +IL LVG Sbjct: 181 LILLLVG 187
>AK101386:Os08g0459300 | Length = 226 Score = 35.0 bits (79), Expect = 0.095 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 5/93 (5%) Frame = +3 Query: 165 AIASSLLHPARSDGDD-----NQLLKGINSYRASLKVPALTENSNADCLAEQLAKKFKGQ 329 A+ ++LL A S D +QL+ INS R + K L +N C+A Q K ++GQ Sbjct: 15 AVLAALLLSAASAADSKNNPADQLVALINSNRTASKASTLDDNQGLGCIALQYIKAYEGQ 74 Query: 330 PCTNTTGANTVPGTEPQFPDYPKFLDRCHLNAS 428 N G + P P+ F C + A+ Sbjct: 75 --CNQVGESKKP---PETSFAETFAPNCGVQAA 102
>AK060409:Os08g0459300 | Length = 226 Score = 35.0 bits (79), Expect = 0.095 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 5/93 (5%) Frame = +3 Query: 165 AIASSLLHPARSDGDD-----NQLLKGINSYRASLKVPALTENSNADCLAEQLAKKFKGQ 329 A+ ++LL A S D +QL+ INS R + K L +N C+A Q K ++GQ Sbjct: 15 AVLAALLLSAASAADSKNNPADQLVALINSNRTASKASTLDDNQGLGCIALQYIKAYEGQ 74 Query: 330 PCTNTTGANTVPGTEPQFPDYPKFLDRCHLNAS 428 N G + P P+ F C + A+ Sbjct: 75 --CNQVGESKKP---PETSFAETFAPNCGVQAA 102
>AK103950:Os12g0102200 | Length = 259 Score = 32.0 bits (71), Expect = 0.81 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 296 GRAASKEVQGAAVHKHHRSQHRPRHRAAVPRLPQVSRPLPPQRVSYR 436 GR A++ HR+ RP ++V LP + RP+P ++S R Sbjct: 155 GRRIINSESDPALNAEHRNTRRPPSSSSVTGLPPMGRPMPSSQMSDR 201
>AK071448:Os11g0102600 | Length = 259 Score = 32.0 bits (71), Expect = 0.81 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 296 GRAASKEVQGAAVHKHHRSQHRPRHRAAVPRLPQVSRPLPPQRVSYR 436 GR A++ HR+ RP ++V LP + RP+P ++S R Sbjct: 155 GRRIINSESDPALNAEHRNTRRPPSSSSVTGLPPMGRPMPSSQMSDR 201
>AF280060:Os11g0102600 | Length = 259 Score = 32.0 bits (71), Expect = 0.81 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 296 GRAASKEVQGAAVHKHHRSQHRPRHRAAVPRLPQVSRPLPPQRVSYR 436 GR A++ HR+ RP ++V LP + RP+P ++S R Sbjct: 155 GRRIINSESDPALNAEHRNTRRPPSSSSVTGLPPMGRPMPSSQMSDR 201
>Os01g0807400:Os01g0807400 | Length = 261 Score = 31.6 bits (70), Expect = 1.1 Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +2 Query: 347 RSQHRPRHRAAVPRLPQVSRPLP-PQRVSYRGWTGDAGMRARPCGRRC 487 R HR HR RLP+V RP P P + AG AR GRRC Sbjct: 89 RGGHRLHHR----RLPRVRRPTPRPSSTASPTPPNAAGSGARVAGRRC 132
>Os01g0328100:Os01g0328100 | Length = 160 Score = 30.4 bits (67), Expect = 2.3 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 1/81 (1%) Frame = +2 Query: 203 RGRQPAPQGDQQLQSFSQGPGAHREQQC*LPGRAASKEVQGAAVHKHHRSQHRPRHRAAV 382 R +P P + L S R + LP +A AA+ + R + RPR R + Sbjct: 72 RRPRPRPPRPRPLPPPSANRRRPRPRPPPLPPSSAFTGTDAAALVRVRRRRPRPRPRCRL 131 Query: 383 PRLPQVSRPLPPQRVS-YRGW 442 PR RP PP + RGW Sbjct: 132 PR----PRPRPPSTAAGVRGW 148
>Os06g0287000:Os06g0287000 | Length = 1014 Score = 30.0 bits (66), Expect = 3.1 Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Frame = +3 Query: 168 IASSLLHPARSDGDDNQLLKGINSYRASLKVPALTENSNADCLA-EQLAKKFKGQPCTNT 344 + S++ A + DD LL G+ K + + N CLA + A+ + Q N Sbjct: 13 VGSAISKAASAAADDTSLLLGVEKDIWEPKFRGMVASGNQSCLAIDSYAEDIRNQSARNV 72 Query: 345 TGANTVPGTEPQFPDYPKFLDRCHLNASVTEDGQVMPACVPGL 473 A V ++ + + L+ NA+ DG CV G+ Sbjct: 73 DEAELVGFSDSK----KRLLEMIDTNAN---DGPAKVICVVGM 108
>AK109808:Os01g0176700 | Length = 477 Score = 30.0 bits (66), Expect = 3.1 Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Frame = +2 Query: 263 GAHREQQC*LPGRAASKEVQGAAVHKHHRSQHRP------RHRAAVPRLPQVSRPLPPQR 424 GAH Q P A+ Q H HH QH P HRA P PLPPQ+ Sbjct: 332 GAHPATQ---PHYTAAVAAQEYYHHHHHHLQHHPAAAALVHHRAVAP-----PPPLPPQQ 383
>AK111205: | Length = 777 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/70 (25%), Positives = 31/70 (44%) Frame = -2 Query: 754 QRCSTRYEQHRSPHFISKTTNPTSERIIQLNGWTEGAQFEPGGAGE*SPESVLVLRTTTT 575 Q CST + + + +++TT TS ++ T EP G E+ L+ + Sbjct: 686 QWCSTTFAATAALYLLTRTTPSTSAKVAPAPNGTGTGAVEPTGT-----EATLLRSSLKP 740 Query: 574 QSPSLPIPTP 545 +P P P+P Sbjct: 741 DAPQPPSPSP 750
>AK121036:Os07g0243200 | Length = 509 Score = 29.6 bits (65), Expect = 4.0 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Frame = +3 Query: 450 MPACVPGLVADV-VLTNYTKSQYNRFLNDTKYSGVGIGNEGDWVVVVLSTSTDSGDYSPA 626 M C+ + + VLT + NR + T G G+G GD V VL+ + +G+ Sbjct: 114 MSNCINSKINKIYVLTQFNSQSLNRHIARTYNIGEGVG-FGDGFVEVLAATQTTGE---- 168 Query: 627 PPGSNW----APSVQPFSWM 674 G W A +V+ F W+ Sbjct: 169 -SGKRWFQGTADAVRQFLWL 187
>AK111184: | Length = 1028 Score = 29.3 bits (64), Expect = 5.2 Identities = 20/80 (25%), Positives = 28/80 (35%), Gaps = 14/80 (17%) Frame = +2 Query: 293 PGRAASKEVQGAAVHKHHRSQHRPRHRAAVPRLPQVSRP--------------LPPQRVS 430 P AA ++ A H S++ H P S P PQ Sbjct: 70 PTAAADPVLESPATHTLLLSRNASPHTRTASPAPDTSAPGSSRRSGPFYLCTWRKPQAKK 129 Query: 431 YRGWTGDAGMRARPCGRRCA 490 ++ W GDA + + G RCA Sbjct: 130 HKTWDGDAILIVKDAGERCA 149
>AK109924:Os11g0538400 | Length = 610 Score = 29.3 bits (64), Expect = 5.2 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = +2 Query: 188 PRQI*RGRQPAPQGDQQLQSFSQGPGAHREQQC*LPGRAASKEV--QGAAVHKHHRSQHR 361 P Q+ R + P +GD QG HR++Q P A + + A R H Sbjct: 474 PPQLPRRQVPQAEGD-----LPQGDRRHRQRQRHPPPAAPWRRAPRRRRAARPGERDVHG 528 Query: 362 PRHRAAVPRLPQVSRP-LPPQ 421 HR P LPQ RP PPQ Sbjct: 529 G-HRQPAPLLPQPPRPRAPPQ 548
>AK106901:Os12g0136300 | Length = 541 Score = 29.3 bits (64), Expect = 5.2 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +2 Query: 311 KEVQGA-AVHKHHRSQHRPRHRAAVPRLPQVSRPLPPQRVSYRGWTGDA 454 +E GA AV + HR + R A V LP PLPP+R+ GDA Sbjct: 329 QEFAGAPAVARCHRLRARHEQLAQVHHLPLALPPLPPRRLPAVFLRGDA 377
>AY344495:Os01g0625300 | Length = 348 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = +2 Query: 329 AVHKHHRSQHRPRHRAAVPRLPQVSRPLPPQ 421 A + R QH P H V LP P PPQ Sbjct: 235 AAERKRRRQHLPSHEPTVCPLPPAPPPQPPQ 265
>AK119538:Os03g0108300 | Length = 236 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Frame = +2 Query: 260 PGAHREQQC*LPGRAASKEVQGA--AVHKHHRSQHRPRHRAAVPRLPQVSRPLPPQR 424 PGA R + G A V A V HR + R AVP L + R LPP R Sbjct: 18 PGAARRDRHRAAGDGAGGAVDAADERVRARHRRRRHHREGDAVPPLVRPHRRLPPLR 74
>AK069479:Os01g0625300 | Length = 339 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = +2 Query: 329 AVHKHHRSQHRPRHRAAVPRLPQVSRPLPPQ 421 A + R QH P H V LP P PPQ Sbjct: 226 AAERKRRRQHLPSHEPTVCPLPPAPPPQPPQ 256
>AK068053:Os01g0764600 | Length = 154 Score = 28.9 bits (63), Expect = 6.8 Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 2/97 (2%) Frame = +2 Query: 203 RGR-QPAPQGDQQLQSFSQGPGAHREQQC*LPGRAASKEVQGAAVHKHHRSQHRPRHRAA 379 RGR + AP ++ Q P A R +C + ++ V P + Sbjct: 12 RGRGEEAPMAEEAAQEQQTDPAASRPVRCIVKLGTRARSVAPLF----------PLCSSL 61 Query: 380 VPRLPQVSRPLPPQRVSYRGWTGDA-GMRARPCGRRC 487 + QV RP R S+R T A G RAR CGR C Sbjct: 62 AASMAQVERP-SRTRESWRASTRRACGRRARSCGRPC 97
>AK121578:Os11g0205500 | Length = 134 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/59 (28%), Positives = 24/59 (40%) Frame = +2 Query: 245 SFSQGPGAHREQQC*LPGRAASKEVQGAAVHKHHRSQHRPRHRAAVPRLPQVSRPLPPQ 421 + + PGA R LP R + +HH +HRP R P P+ PP+ Sbjct: 24 ALGRDPGARR-----LPRRGRTLLRPRRPRQQHHPQRHRPPLRITAPPTPRPPTAAPPE 77
>AK109110:Os02g0708000 | Length = 188 Score = 28.5 bits (62), Expect = 8.9 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 335 HKHHRSQHRPRHRAAVPRLPQVSRPLPP 418 H+ H+ QH P+ PQ P+PP Sbjct: 135 HQQHQHQHHPQQHGMPQHHPQHGMPMPP 162
>AK073544:Os01g0895300 | Length = 376 Score = 28.5 bits (62), Expect = 8.9 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%) Frame = +2 Query: 203 RGRQPAPQGDQQLQSFSQGPGAHREQQC*LPGRAASKEVQGAAVH--------------K 340 R R+ P GD+ ++ + P R +PG AA + VQG V + Sbjct: 270 RARRRHPPGDRDHRARPRLPPGAR-----VPG-AAGQVVQGEEVLELVPPQRRPRRRRLR 323 Query: 341 HHRSQHRPRHRAAVPRLPQVSRPLP 415 + HRP+HRA R P+ R LP Sbjct: 324 RRQHLHRPQHRARGQRRPRRLRDLP 348 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 29,597,690 Number of extensions: 662159 Number of successful extensions: 2311 Number of sequences better than 10.0: 22 Number of HSP's gapped: 2301 Number of HSP's successfully gapped: 22 Length of query: 369 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 267 Effective length of database: 11,315,673 Effective search space: 3021284691 Effective search space used: 3021284691 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
