ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf40a13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DQ245706.1| Zea mays clone 19613 mRNA sequence 345 2e-91
2gb|BT018245.1| Zea mays clone EL01N0563D07.c mRNA sequence 315 2e-82
3dbj|AK242254.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 295 2e-76
4ref|NM_001066986.1| Oryza sativa (japonica cultivar-group) Os07g... 295 2e-76
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 295 2e-76
6dbj|AP003832.3| Oryza sativa (japonica cultivar-group) genomic D... 295 2e-76
7emb|CT836144.1| Oryza sativa (indica cultivar-group) cDNA clone:... 287 4e-74
8emb|CT836045.1| Oryza sativa (indica cultivar-group) cDNA clone:... 287 4e-74
9gb|AY106689.1| Zea mays PCO137705 mRNA sequence 224 5e-55
10gb|BT018546.1| Zea mays clone EL01N0438C08.d mRNA sequence 62 5e-06
11emb|CR376801.8| Zebrafish DNA sequence from clone CH211-13K18 in... 46 0.27
12gb|AC142143.29| Medicago truncatula clone mth2-25c22, complete s... 46 0.27
13ref|NM_001063087.1| Oryza sativa (japonica cultivar-group) Os06g... 44 1.1
14emb|CT030217.11| Zebrafish DNA sequence from clone DKEY-100G7 in... 44 1.1
15gb|CP000431.1| Rhodococcus sp. RHA1, complete genome 44 1.1
16gb|CP000312.1| Clostridium perfringens SM101, complete genome 44 1.1
17gb|CP000246.1| Clostridium perfringens ATCC 13124, complete genome 44 1.1
18gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome... 44 1.1
19gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome... 44 1.1
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.1
21dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.1
22emb|AL627187.13| Mouse DNA sequence from clone RP23-319B15 on ch... 44 1.1
23gb|AC010982.5| Homo sapiens BAC clone RP11-475I16 from 2, comple... 44 1.1
24dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 44 1.1
25gb|AC091533.27| Mus musculus strain C57BL/6J chromosome 11 clone... 44 1.1
26dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.1
27dbj|AK106504.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 1.1
28emb|AL669843.4| Human DNA sequence from clone XXbac-33F23 on chr... 44 1.1
29gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, comp... 44 1.1
30ref|XR_027079.1| PREDICTED: Gallus gallus similar to lymphocyte ... 42 4.2
31ref|XM_001231358.1| PREDICTED: Gallus gallus hypothetical protei... 42 4.2
32ref|XM_001234054.1| PREDICTED: Gallus gallus similar to huntingt... 42 4.2
33gb|AC187320.9| Canis Familiaris chromosome 16, clone XX-49O13, c... 42 4.2
34gb|AC190398.1| Gallus gallus BAC clone CH261-55O13 from chromoso... 42 4.2
35emb|CR753895.24| Zebrafish DNA sequence from clone DKEYP-114A12 ... 42 4.2
36gb|DQ483303.1| Gymnogyps californianus contig 6H genomic sequence 42 4.2
37gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se... 42 4.2
38emb|CT025611.16| Mouse DNA sequence from clone RP24-100P15 on ch... 42 4.2
39gb|DQ027982.1| Brotulina fusca cytochrome c oxidase subunit I (C... 42 4.2
40gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosom... 42 4.2
41gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, comp... 42 4.2
42gb|AF019413.1|HSMHCT8S22 Homo sapiens HLA class III region conta... 42 4.2
43gb|AC127241.3| Mus musculus BAC clone RP24-403D23 from chromosom... 42 4.2
44gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome... 42 4.2
45gb|AC166104.4| Mus musculus BAC clone RP23-320G7 from chromosome... 42 4.2
46gb|AC116799.9| Mus musculus chromosome 18, clone RP24-333N14, co... 42 4.2
47gb|AC146606.2| Mus musculus BAC clone RP23-277P7 from chromosome... 42 4.2
48gb|AC122476.4| Mus musculus BAC clone RP24-334L2 from chromosome... 42 4.2
49gb|AC130221.4| Mus musculus BAC clone RP23-168E11 from chromosom... 42 4.2
50gb|AC133190.2| Mus musculus BAC clone RP23-375H9 from chromosome... 42 4.2
51gb|AC125058.4| Mus musculus BAC clone RP23-400N6 from chromosome... 42 4.2
52gb|AC132588.4| Mus musculus BAC clone RP24-258L16 from chromosom... 42 4.2
53gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, comple... 42 4.2
54gb|AC103982.10| Homo sapiens chromosome 15, clone RP11-343B18, c... 42 4.2
55gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complet... 42 4.2
56gb|AC154171.5| Mus musculus BAC clone RP24-259F16 from chromosom... 42 4.2
57gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 4.2
58gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosom... 42 4.2
59dbj|AK134343.1| Mus musculus 13 days embryo male testis cDNA, RI... 42 4.2
60gb|AC160463.5| Mus musculus chromosome 1, clone RP23-266D4, comp... 42 4.2
61gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence 42 4.2
62gb|AC161583.2| Mus musculus BAC clone RP24-566C13 from chromosom... 42 4.2
63gb|AC154492.2| Mus musculus BAC clone RP24-107B10 from chromosom... 42 4.2
64emb|CT025527.7| Mouse DNA sequence from clone RP23-279J20 on chr... 42 4.2
65emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8... 42 4.2
66emb|AL662849.8| Human DNA sequence from clone XXbac-116I9 on chr... 42 4.2
67gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, co... 42 4.2
68gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, com... 42 4.2
69gb|AC027672.12| Homo sapiens chromosome 10 clone RP11-198M6, com... 42 4.2
70dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.2
71emb|CR753845.11| Human DNA sequence from clone DADB-112B14 on ch... 42 4.2
72emb|AL844853.23| Human DNA sequence from clone DAQB-331I12 on ch... 42 4.2
73emb|AL358492.19| Human DNA sequence from clone RP11-340B24 on ch... 42 4.2
74emb|AL355298.11| Human DNA sequence from clone RP11-781P14 on ch... 42 4.2
75gb|AC067805.9| Homo sapiens chromosome 15, clone RP11-63A23, com... 42 4.2
76gb|AC157652.3| Mus musculus BAC clone RP24-324J2 from chromosome... 42 4.2
77emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA ... 42 4.2
78ref|NM_001427.2| Homo sapiens engrailed homolog 2 (EN2), mRNA 42 4.2
79emb|AL645922.11| Human DNA sequence from clone XXbac-116M5 on ch... 42 4.2
80emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, ... 42 4.2
81emb|AL049547.10|HSDJ34F7 Human DNA sequence from clone RP1-34F7 ... 42 4.2
82gb|AC153881.4| Mus musculus 10 BAC RP23-257B9 (Roswell Park Canc... 42 4.2
83gb|AC160409.6| Mus musculus 10 BAC RP23-184O11 (Roswell Park Can... 42 4.2
84emb|CR759782.7| Human DNA sequence from clone DAMC-178C20 on chr... 42 4.2
85emb|BX005243.3| Mouse DNA sequence from clone RP23-269L17 on chr... 42 4.2
86emb|AL645566.15| Mouse DNA sequence from clone RP23-398M13 on ch... 42 4.2
87emb|AL954244.1| Pan troglodytes chromosome 22 clone PTB-060F03 m... 42 4.2
88emb|AL954243.1| Pan troglodytes chromosome 22 clone PTB-111H18 m... 42 4.2
89gb|AC154205.1| Mus musculus BAC clone RP24-88I1 from chromosome ... 42 4.2
90gb|L26261.1|HUMMHRP1B Human MHC class III HLA-RP1 gene 42 4.2
91gb|AC154767.2| Mus musculus BAC clone RP23-105P19 from chromosom... 42 4.2
92gb|AC156497.2| Mus musculus BAC clone RP24-351K2 from chromosome... 42 4.2
93gb|AC092839.4| Homo sapiens BAC clone RP11-257N16 from 2, comple... 42 4.2
94gb|AC006205.9| Homo sapiens 12 PAC RP5-1154L15 (Roswell Park Can... 42 4.2
95gb|AC021054.28| Homo sapiens 12 BAC RP11-218M22 (Roswell Park Ca... 42 4.2
96dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.2
97emb|BX679671.7| Human DNA sequence from clone DASS-307J8 on chro... 42 4.2
98emb|BX571960.6| Zebrafish DNA sequence from clone DKEY-165I8 in ... 42 4.2
99emb|BX936373.1| Human DNA sequence from clone DASS-307J8 on chro... 42 4.2
100gb|L12701.1|HUMEN2A02 Homo sapiens engrailed protein (EN2) gene,... 42 4.2
101gb|AC154631.2| Mus musculus BAC clone RP23-264F8 from 16, comple... 42 4.2
102gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se... 42 4.2
103gb|AC117771.17| Mus musculus chromosome 1, clone RP24-512A5, com... 42 4.2
104gb|AC006276.1|AC006276 Homo sapiens chromosome 19, cosmid R28379... 42 4.2
105gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome ... 42 4.2
106emb|CT573094.2| Macaca mulatta chromosome 9 CH250-64B17, complet... 42 4.2
107emb|CR955004.2| Medicago truncatula chromosome 5 clone mte1-9e19... 42 4.2
108emb|AL603743.8| Zebrafish DNA sequence from clone RP71-98D8 Cont... 42 4.2
109emb|CT573020.1| Medicago truncatula chromosome 5 clone mth2-83i1... 42 4.2
110gb|AY722141.1| Eleotris amblyopsis isolate C cytochrome oxidase ... 42 4.2
111gb|AY722136.1| Eleotris amblyopsis isolate A cytochrome oxidase ... 42 4.2
112emb|AL611986.15| Mouse DNA sequence from clone RP23-74I9 on chro... 42 4.2
113emb|AL596331.15| Mouse DNA sequence from clone RP23-81G14 on chr... 42 4.2
114emb|AL596246.10| Mouse DNA sequence from clone RP23-186E14 on ch... 42 4.2
115gb|U24578.1|HSU24578 Human RP1 and complement C4B precursor (C4B... 42 4.2
116dbj|AB001869.1| Anolis carolinensis Brain-2 gene, complete cds 42 4.2
117emb|AL645535.16| Mouse DNA sequence from clone RP23-145G23 on ch... 42 4.2

>gb|DQ245706.1| Zea mays clone 19613 mRNA sequence
          Length = 898
 Score =  345 bits (174), Expect = 2e-91
 Identities = 402/478 (84%)
 Strand = Plus / Plus

                                                                       
Query: 169 tcgcctcctccctcctgcaccccgccagatctgacggggacgacaaccagctcctcaagg 228
           ||||||||||||||||||||  ||||||||| |||||  | |||   |||||||||||||
Sbjct: 148 tcgcctcctccctcctgcactgcgccagatccgacggcaatgacgcgcagctcctcaagg 207

                                                                       
Query: 229 ggatcaacagctacagagcttctctcaaggtcccggcgctcaccgagaacagcaatgctg 288
           | ||||||||||||||  | || |||||||||||||||||  |||||||||  || || |
Sbjct: 208 gcatcaacagctacaggtcctcgctcaaggtcccggcgctgtccgagaacaagaacgcgg 267

                                                                       
Query: 289 actgcctggccgagcagctagcaaagaagttcaaggggcagccgtgcacaaacaccaccg 348
             ||||||||||||||||| || | | ||||||||||||||  |||||| ||||| || |
Sbjct: 268 cgtgcctggccgagcagctcgcgaggcagttcaaggggcaggagtgcaccaacacgacgg 327

                                                                       
Query: 349 gagccaacaccgtccccggcaccgagccgcagttccccgactaccccaagtttctcgacc 408
           | ||||||||||||  |||||| |||| |||||| || |||||||||| ||  || ||||
Sbjct: 328 gcgccaacaccgtcatcggcacggagcagcagtttccggactaccccaggtacctggacc 387

                                                                       
Query: 409 gctgccacctcaacgcgtcagttaccgaggatggacaggtgatgccggcatgcgtgcccg 468
           ||||||||||||||||||| || |||||||| || |||||||||||||| |||||||| |
Sbjct: 388 gctgccacctcaacgcgtcggtgaccgaggacggccaggtgatgccggcgtgcgtgccgg 447

                                                                       
Query: 469 gccttgtggccgacgttgtgctgaccaactacaccaagtcccagtacaaccggttcctca 528
           |||| ||  ||| ||| || ||  |||||||||||||||| |||||||||||||||||||
Sbjct: 448 gcctcgtccccgccgtcgtcctcgccaactacaccaagtcgcagtacaaccggttcctca 507

                                                                       
Query: 529 acgacaccaagtactccggcgtcgggatcggcaacgaaggagactgggtggtcgtcgtcc 588
           |||||| | ||| |||||||| ||||||||  | ||| || |||||||| || ||||| |
Sbjct: 508 acgacagccagttctccggcgccgggatcgcgagcgagggcgactgggtcgtggtcgtgc 567

                                                                     
Query: 589 tcagcaccagcaccgactccggcgactactcccctgctcccccgggctcgaactgggc 646
           ||||||||||||| |  |||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 568 tcagcaccagcacgggatccggcgactactcgccggctccgccgggctccaactgggc 625



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 685 tggtagggtttgtagttttgctgatgaagtgag 717
           |||| |||||||||||||||||| |||||||||
Sbjct: 673 tggtggggtttgtagttttgctggtgaagtgag 705



to top

>gb|BT018245.1| Zea mays clone EL01N0563D07.c mRNA sequence
          Length = 1101

 Score =  315 bits (159), Expect = 2e-82
 Identities = 363/431 (84%)
 Strand = Plus / Minus

                                                                       
Query: 216 cagctcctcaaggggatcaacagctacagagcttctctcaaggtcccggcgctcaccgag 275
           |||||||||||||| ||||||||||||||  | || |||||||||||||||||  |||||
Sbjct: 459 cagctcctcaagggcatcaacagctacaggtcctcgctcaaggtcccggcgctggccgag 400

                                                                       
Query: 276 aacagcaatgctgactgcctggccgagcagctagcaaagaagttcaaggggcagccgtgc 335
           ||||  || || |  ||||||||||||||||| || | | ||||||||||||||  ||||
Sbjct: 399 aacaagaacgcggcgtgcctggccgagcagctcgcgaggcagttcaaggggcaggagtgc 340

                                                                       
Query: 336 acaaacaccaccggagccaacaccgtccccggcaccgagccgcagttccccgactacccc 395
           || ||||| || || ||||||||||||  |||||| |||| ||||||||| |||||||||
Sbjct: 339 accaacacgacgggcgccaacaccgtcatcggcacggagcagcagttcccggactacccc 280

                                                                       
Query: 396 aagtttctcgaccgctgccacctcaacgcgtcagttaccgaggatggacaggtgatgccg 455
           | ||  || ||||||||||||||||||||||| || |||||||| || ||||||||||||
Sbjct: 279 aggtacctggaccgctgccacctcaacgcgtcggtgaccgaggacggccaggtgatgccg 220

                                                                       
Query: 456 gcatgcgtgcccggccttgtggccgacgttgtgctgaccaactacaccaagtcccagtac 515
           || |||||||| ||||| ||  ||| ||| || ||  |||||||||||||||| ||||||
Sbjct: 219 gcgtgcgtgccgggcctcgtccccgccgtcgtcctcgccaactacaccaagtcgcagtac 160

                                                                       
Query: 516 aaccggttcctcaacgacaccaagtactccggcgtcgggatcggcaacgaaggagactgg 575
           ||||||||||||||||||| | ||| |||||||| ||||||||  | ||| || ||||||
Sbjct: 159 aaccggttcctcaacgacagccagttctccggcgccgggatcgcgagcgagggcgactgg 100

                                                                       
Query: 576 gtggtcgtcgtcctcagcaccagcaccgactccggcgactactcccctgctcccccgggc 635
           || || ||||| |||||||||||||| |  |||||||||||||| || |||||   ||||
Sbjct: 99  gtcgtggtcgtgctcagcaccagcacgggatccggcgactactcgccggctccaaggggc 40

                      
Query: 636 tcgaactgggc 646
           || ||||||||
Sbjct: 39  tccaactgggc 29



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 169 tcgcctcctccctcctgcaccccgccagatctgacgg 205
           ||||||||||||||||||||  ||||||||| |||||
Sbjct: 988 tcgcctcctccctcctgcactgcgccagatccgacgg 952



to top

>dbj|AK242254.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075182P04,
           full insert sequence
          Length = 921

 Score =  295 bits (149), Expect = 2e-76
 Identities = 365/437 (83%)
 Strand = Plus / Plus

                                                                       
Query: 216 cagctcctcaaggggatcaacagctacagagcttctctcaaggtcccggcgctcaccgag 275
           ||||| |||||||| |||||||||||||||||||| ||||| ||||| |||||  |||||
Sbjct: 97  cagcttctcaagggcatcaacagctacagagcttccctcaaagtccctgcgctatccgag 156

                                                                       
Query: 276 aacagcaatgctgactgcctggccgagcagctagcaaagaagttcaaggggcagccgtgc 335
           ||||  ||||||| |||| |||| |||||||||||| || | ||||| |  || || |||
Sbjct: 157 aacaagaatgctgcctgcttggctgagcagctagcacagcaattcaaagaccaaccttgc 216

                                                                       
Query: 336 acaaacaccaccggagccaacaccgtccccggcaccgagccgcagttccccgactacccc 395
           || |||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||| 
Sbjct: 217 accaacaccaccggagcaaacactgtccctggcaccgagcagcagttccccgactaccca 276

                                                                       
Query: 396 aagtttctcgaccgctgccacctcaacgcgtcagttaccgaggatggacaggtgatgccg 455
           ||||  |||||||  ||||| ||||||||||| || ||||  || || ||||||||||||
Sbjct: 277 aagtacctcgaccattgccatctcaacgcgtcggtgaccggagacggtcaggtgatgccg 336

                                                                       
Query: 456 gcatgcgtgcccggccttgtggccgacgttgtgctgaccaactacaccaagtcccagtac 515
           || ||||| ||||| |||||  | || || || |||||||||||||||||||| ||||||
Sbjct: 337 gcctgcgttcccggacttgtacctgatgtggttctgaccaactacaccaagtcacagtac 396

                                                                       
Query: 516 aaccggttcctcaacgacaccaagtactccggcgtcgggatcggcaacgaaggagactgg 575
           |||| ||  || || |||||||||| ||| || || |||||||  || || ||||| |||
Sbjct: 397 aaccagtatctgaatgacaccaagttctctggtgttgggatcgcgaatgagggagattgg 456

                                                                       
Query: 576 gtggtcgtcgtcctcagcaccagcaccgactccggcgactactcccctgctcccccgggc 635
           |||||||| ||||||||||| ||| | |  || || || ||||||||||||||||| |||
Sbjct: 457 gtggtcgttgtcctcagcacgagctcgggttcaggtgattactcccctgctccccctggc 516

                            
Query: 636 tcgaactgggctccttc 652
           || ||||||||||||||
Sbjct: 517 tccaactgggctccttc 533



to top

>ref|NM_001066986.1| Oryza sativa (japonica cultivar-group) Os07g0645000 (Os07g0645000)
           mRNA, complete cds
          Length = 639

 Score =  295 bits (149), Expect = 2e-76
 Identities = 365/437 (83%)
 Strand = Plus / Plus

                                                                       
Query: 216 cagctcctcaaggggatcaacagctacagagcttctctcaaggtcccggcgctcaccgag 275
           ||||| |||||||| |||||||||||||||||||| ||||| ||||| |||||  |||||
Sbjct: 85  cagcttctcaagggcatcaacagctacagagcttccctcaaagtccctgcgctatccgag 144

                                                                       
Query: 276 aacagcaatgctgactgcctggccgagcagctagcaaagaagttcaaggggcagccgtgc 335
           ||||  ||||||| |||| |||| |||||||||||| || | ||||| |  || || |||
Sbjct: 145 aacaagaatgctgcctgcttggctgagcagctagcacagcaattcaaagaccaaccttgc 204

                                                                       
Query: 336 acaaacaccaccggagccaacaccgtccccggcaccgagccgcagttccccgactacccc 395
           || |||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||| 
Sbjct: 205 accaacaccaccggagcaaacactgtccctggcaccgagcagcagttccccgactaccca 264

                                                                       
Query: 396 aagtttctcgaccgctgccacctcaacgcgtcagttaccgaggatggacaggtgatgccg 455
           ||||  |||||||  ||||| ||||||||||| || ||||  || || ||||||||||||
Sbjct: 265 aagtacctcgaccattgccatctcaacgcgtcggtgaccggagacggtcaggtgatgccg 324

                                                                       
Query: 456 gcatgcgtgcccggccttgtggccgacgttgtgctgaccaactacaccaagtcccagtac 515
           || ||||| ||||| |||||  | || || || |||||||||||||||||||| ||||||
Sbjct: 325 gcctgcgttcccggacttgtacctgatgtggttctgaccaactacaccaagtcacagtac 384

                                                                       
Query: 516 aaccggttcctcaacgacaccaagtactccggcgtcgggatcggcaacgaaggagactgg 575
           |||| ||  || || |||||||||| ||| || || |||||||  || || ||||| |||
Sbjct: 385 aaccagtatctgaatgacaccaagttctctggtgttgggatcgcgaatgagggagattgg 444

                                                                       
Query: 576 gtggtcgtcgtcctcagcaccagcaccgactccggcgactactcccctgctcccccgggc 635
           |||||||| ||||||||||| ||| | |  || || || ||||||||||||||||| |||
Sbjct: 445 gtggtcgttgtcctcagcacgagctcgggttcaggtgattactcccctgctccccctggc 504

                            
Query: 636 tcgaactgggctccttc 652
           || ||||||||||||||
Sbjct: 505 tccaactgggctccttc 521



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  295 bits (149), Expect = 2e-76
 Identities = 365/437 (83%)
 Strand = Plus / Minus

                                                                            
Query: 216      cagctcctcaaggggatcaacagctacagagcttctctcaaggtcccggcgctcaccgag 275
                ||||| |||||||| |||||||||||||||||||| ||||| ||||| |||||  |||||
Sbjct: 26829324 cagcttctcaagggcatcaacagctacagagcttccctcaaagtccctgcgctatccgag 26829265

                                                                            
Query: 276      aacagcaatgctgactgcctggccgagcagctagcaaagaagttcaaggggcagccgtgc 335
                ||||  ||||||| |||| |||| |||||||||||| || | ||||| |  || || |||
Sbjct: 26829264 aacaagaatgctgcctgcttggctgagcagctagcacagcaattcaaagaccaaccttgc 26829205

                                                                            
Query: 336      acaaacaccaccggagccaacaccgtccccggcaccgagccgcagttccccgactacccc 395
                || |||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||| 
Sbjct: 26829204 accaacaccaccggagcaaacactgtccctggcaccgagcagcagttccccgactaccca 26829145

                                                                            
Query: 396      aagtttctcgaccgctgccacctcaacgcgtcagttaccgaggatggacaggtgatgccg 455
                ||||  |||||||  ||||| ||||||||||| || ||||  || || ||||||||||||
Sbjct: 26829144 aagtacctcgaccattgccatctcaacgcgtcggtgaccggagacggtcaggtgatgccg 26829085

                                                                            
Query: 456      gcatgcgtgcccggccttgtggccgacgttgtgctgaccaactacaccaagtcccagtac 515
                || ||||| ||||| |||||  | || || || |||||||||||||||||||| ||||||
Sbjct: 26829084 gcctgcgttcccggacttgtacctgatgtggttctgaccaactacaccaagtcacagtac 26829025

                                                                            
Query: 516      aaccggttcctcaacgacaccaagtactccggcgtcgggatcggcaacgaaggagactgg 575
                |||| ||  || || |||||||||| ||| || || |||||||  || || ||||| |||
Sbjct: 26829024 aaccagtatctgaatgacaccaagttctctggtgttgggatcgcgaatgagggagattgg 26828965

                                                                            
Query: 576      gtggtcgtcgtcctcagcaccagcaccgactccggcgactactcccctgctcccccgggc 635
                |||||||| ||||||||||| ||| | |  || || || ||||||||||||||||| |||
Sbjct: 26828964 gtggtcgttgtcctcagcacgagctcgggttcaggtgattactcccctgctccccctggc 26828905

                                 
Query: 636      tcgaactgggctccttc 652
                || ||||||||||||||
Sbjct: 26828904 tccaactgggctccttc 26828888



to top

>dbj|AP003832.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1458_B07
          Length = 99415

 Score =  295 bits (149), Expect = 2e-76
 Identities = 365/437 (83%)
 Strand = Plus / Minus

                                                                         
Query: 216   cagctcctcaaggggatcaacagctacagagcttctctcaaggtcccggcgctcaccgag 275
             ||||| |||||||| |||||||||||||||||||| ||||| ||||| |||||  |||||
Sbjct: 75498 cagcttctcaagggcatcaacagctacagagcttccctcaaagtccctgcgctatccgag 75439

                                                                         
Query: 276   aacagcaatgctgactgcctggccgagcagctagcaaagaagttcaaggggcagccgtgc 335
             ||||  ||||||| |||| |||| |||||||||||| || | ||||| |  || || |||
Sbjct: 75438 aacaagaatgctgcctgcttggctgagcagctagcacagcaattcaaagaccaaccttgc 75379

                                                                         
Query: 336   acaaacaccaccggagccaacaccgtccccggcaccgagccgcagttccccgactacccc 395
             || |||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||| 
Sbjct: 75378 accaacaccaccggagcaaacactgtccctggcaccgagcagcagttccccgactaccca 75319

                                                                         
Query: 396   aagtttctcgaccgctgccacctcaacgcgtcagttaccgaggatggacaggtgatgccg 455
             ||||  |||||||  ||||| ||||||||||| || ||||  || || ||||||||||||
Sbjct: 75318 aagtacctcgaccattgccatctcaacgcgtcggtgaccggagacggtcaggtgatgccg 75259

                                                                         
Query: 456   gcatgcgtgcccggccttgtggccgacgttgtgctgaccaactacaccaagtcccagtac 515
             || ||||| ||||| |||||  | || || || |||||||||||||||||||| ||||||
Sbjct: 75258 gcctgcgttcccggacttgtacctgatgtggttctgaccaactacaccaagtcacagtac 75199

                                                                         
Query: 516   aaccggttcctcaacgacaccaagtactccggcgtcgggatcggcaacgaaggagactgg 575
             |||| ||  || || |||||||||| ||| || || |||||||  || || ||||| |||
Sbjct: 75198 aaccagtatctgaatgacaccaagttctctggtgttgggatcgcgaatgagggagattgg 75139

                                                                         
Query: 576   gtggtcgtcgtcctcagcaccagcaccgactccggcgactactcccctgctcccccgggc 635
             |||||||| ||||||||||| ||| | |  || || || ||||||||||||||||| |||
Sbjct: 75138 gtggtcgttgtcctcagcacgagctcgggttcaggtgattactcccctgctccccctggc 75079

                              
Query: 636   tcgaactgggctccttc 652
             || ||||||||||||||
Sbjct: 75078 tccaactgggctccttc 75062



to top

>emb|CT836144.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN007C13, full
           insert sequence
          Length = 798

 Score =  287 bits (145), Expect = 4e-74
 Identities = 364/437 (83%)
 Strand = Plus / Plus

                                                                       
Query: 216 cagctcctcaaggggatcaacagctacagagcttctctcaaggtcccggcgctcaccgag 275
           ||||| || ||||| |||||||||||||||||||| ||||| ||||| |||||  |||||
Sbjct: 145 cagcttcttaagggcatcaacagctacagagcttccctcaaagtccctgcgctatccgag 204

                                                                       
Query: 276 aacagcaatgctgactgcctggccgagcagctagcaaagaagttcaaggggcagccgtgc 335
           ||||  ||||||| |||| |||| |||||||||||| || | ||||| |  || || |||
Sbjct: 205 aacaagaatgctgcctgcttggctgagcagctagcacagcaattcaaagaccaaccttgc 264

                                                                       
Query: 336 acaaacaccaccggagccaacaccgtccccggcaccgagccgcagttccccgactacccc 395
           || |||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||| 
Sbjct: 265 accaacaccaccggagcaaacactgtccctggcaccgagcagcagttccccgactaccca 324

                                                                       
Query: 396 aagtttctcgaccgctgccacctcaacgcgtcagttaccgaggatggacaggtgatgccg 455
           ||||  |||||||  ||||| ||||||||||| || ||||  || || ||||||||||||
Sbjct: 325 aagtacctcgaccattgccatctcaacgcgtcggtgaccggagacggtcaggtgatgccg 384

                                                                       
Query: 456 gcatgcgtgcccggccttgtggccgacgttgtgctgaccaactacaccaagtcccagtac 515
           || ||||| ||||| |||||  | || || || |||||||||||||||||||| ||||||
Sbjct: 385 gcctgcgttcccggacttgtacctgatgtggttctgaccaactacaccaagtcacagtac 444

                                                                       
Query: 516 aaccggttcctcaacgacaccaagtactccggcgtcgggatcggcaacgaaggagactgg 575
           |||| ||  || || |||||||||| ||| || || |||||||  || || ||||| |||
Sbjct: 445 aaccagtatctgaatgacaccaagttctctggtgttgggatcgcgaatgagggagattgg 504

                                                                       
Query: 576 gtggtcgtcgtcctcagcaccagcaccgactccggcgactactcccctgctcccccgggc 635
           |||||||| ||||||||||| ||| | |  || || || ||||||||||||||||| |||
Sbjct: 505 gtggtcgtggtcctcagcacgagctcgggttcaggtgattactcccctgctccccctggc 564

                            
Query: 636 tcgaactgggctccttc 652
           || ||||||||||||||
Sbjct: 565 tccaactgggctccttc 581



to top

>emb|CT836045.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA012O16, full
           insert sequence
          Length = 884

 Score =  287 bits (145), Expect = 4e-74
 Identities = 364/437 (83%)
 Strand = Plus / Plus

                                                                       
Query: 216 cagctcctcaaggggatcaacagctacagagcttctctcaaggtcccggcgctcaccgag 275
           ||||| || ||||| |||||||||||||||||||| ||||| ||||| |||||  |||||
Sbjct: 199 cagcttcttaagggcatcaacagctacagagcttccctcaaagtccctgcgctatccgag 258

                                                                       
Query: 276 aacagcaatgctgactgcctggccgagcagctagcaaagaagttcaaggggcagccgtgc 335
           ||||  ||||||| |||| |||| |||||||||||| || | ||||| |  || || |||
Sbjct: 259 aacaagaatgctgcctgcttggctgagcagctagcacagcaattcaaagaccaaccttgc 318

                                                                       
Query: 336 acaaacaccaccggagccaacaccgtccccggcaccgagccgcagttccccgactacccc 395
           || |||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||| 
Sbjct: 319 accaacaccaccggagcaaacactgtccctggcaccgagcagcagttccccgactaccca 378

                                                                       
Query: 396 aagtttctcgaccgctgccacctcaacgcgtcagttaccgaggatggacaggtgatgccg 455
           ||||  |||||||  ||||| ||||||||||| || ||||  || || ||||||||||||
Sbjct: 379 aagtacctcgaccattgccatctcaacgcgtcggtgaccggagacggtcaggtgatgccg 438

                                                                       
Query: 456 gcatgcgtgcccggccttgtggccgacgttgtgctgaccaactacaccaagtcccagtac 515
           || ||||| ||||| |||||  | || || || |||||||||||||||||||| ||||||
Sbjct: 439 gcctgcgttcccggacttgtacctgatgtggttctgaccaactacaccaagtcacagtac 498

                                                                       
Query: 516 aaccggttcctcaacgacaccaagtactccggcgtcgggatcggcaacgaaggagactgg 575
           |||| ||  || || |||||||||| ||| || || |||||||  || || ||||| |||
Sbjct: 499 aaccagtatctgaatgacaccaagttctctggtgttgggatcgcgaatgagggagattgg 558

                                                                       
Query: 576 gtggtcgtcgtcctcagcaccagcaccgactccggcgactactcccctgctcccccgggc 635
           |||||||| ||||||||||| ||| | |  || || || ||||||||||||||||| |||
Sbjct: 559 gtggtcgtggtcctcagcacgagctcgggttcaggtgattactcccctgctccccctggc 618

                            
Query: 636 tcgaactgggctccttc 652
           || ||||||||||||||
Sbjct: 619 tccaactgggctccttc 635



to top

>gb|AY106689.1| Zea mays PCO137705 mRNA sequence
          Length = 698

 Score =  224 bits (113), Expect = 5e-55
 Identities = 236/277 (85%)
 Strand = Plus / Plus

                                                                       
Query: 370 ccgagccgcagttccccgactaccccaagtttctcgaccgctgccacctcaacgcgtcag 429
           |||||| ||||||||| |||||||||| ||  || ||||||||||||||||||||||| |
Sbjct: 187 ccgagcagcagttcccggactaccccaggtacctggaccgctgccacctcaacgcgtcgg 246

                                                                       
Query: 430 ttaccgaggatggacaggtgatgccggcatgcgtgcccggccttgtggccgacgttgtgc 489
           | |||||||| || |||||||||||||| |||||||| ||||| |   ||| ||| || |
Sbjct: 247 tgaccgaggacggccaggtgatgccggcgtgcgtgccgggcctcgcccccgccgtcgtcc 306

                                                                       
Query: 490 tgaccaactacaccaagtcccagtacaaccggttcctcaacgacaccaagtactccggcg 549
           |  |||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||
Sbjct: 307 tcgccaactacaccaagtcgcagtacaaccggttcctcaacgacagccagttctccggcg 366

                                                                       
Query: 550 tcgggatcggcaacgaaggagactgggtggtcgtcgtcctcagcaccagcaccgactccg 609
            ||||||||  | ||| || |||||||| || ||||| |||||||||||||| |  ||||
Sbjct: 367 ccgggatcgcgagcgagggcgactgggtcgtggtcgtgctcagcaccagcacgggatccg 426

                                                
Query: 610 gcgactactcccctgctcccccgggctcgaactgggc 646
           |||||||||| || ||||| |||||||| ||||||||
Sbjct: 427 gcgactactcgccggctccgccgggctccaactgggc 463



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 116/138 (84%)
 Strand = Plus / Plus

                                                                       
Query: 169 tcgcctcctccctcctgcaccccgccagatctgacggggacgacaaccagctcctcaagg 228
           ||||||||||||||||||||  ||||||||| |||||  | |||   |||||||||||||
Sbjct: 58  tcgcctcctccctcctgcactgcgccagatccgacggcaatgacgcgcagctcctcaagg 117

                                                                       
Query: 229 ggatcaacagctacagagcttctctcaaggtcccggcgctcaccgagaacagcaatgctg 288
           | ||||||||||||||  | || |||||||||||||||||  |||||||||  || || |
Sbjct: 118 gcatcaacagctacaggtcctcgctcaaggtcccggcgctggccgagaacaagaacgcgg 177

                             
Query: 289 actgcctggccgagcagc 306
             ||||||||||||||||
Sbjct: 178 cgtgcctggccgagcagc 195



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 685 tggtagggtttgtagttttgctgatgaagtgag 717
           |||| |||||||||||||||||| |||||||||
Sbjct: 511 tggtggggtttgtagttttgctggtgaagtgag 543



to top

>gb|BT018546.1| Zea mays clone EL01N0438C08.d mRNA sequence
          Length = 1776

 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 108/133 (81%), Gaps = 3/133 (2%)
 Strand = Plus / Plus

                                                                       
Query: 216 cagctcctcaaggggatcaacagctacagagcttctctcaaggtcccggcgctcaccgag 275
           |||||||||||||| |||||||||||| |  | || ||||||||||||  |    |||||
Sbjct: 435 cagctcctcaagggcatcaacagctactggtcctcgctcaaggtcccgttgt---ccgag 491

                                                                       
Query: 276 aacagcaatgctgactgcctggccgagcagctagcaaagaagttcaaggggcagccgtgc 335
           ||||  ||||| |  || |||||||||||||| |||| | ||||||||||||||  ||||
Sbjct: 492 aacaagaatgcggcatgtctggccgagcagctcgcaaggcagttcaaggggcaggagtgc 551

                        
Query: 336 acaaacaccaccg 348
           || ||||| ||||
Sbjct: 552 accaacacgaccg 564



to top

>emb|CR376801.8| Zebrafish DNA sequence from clone CH211-13K18 in linkage group 10,
             complete sequence
          Length = 199715

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 889   ttttcactatttgcctttcacca 911
             |||||||||||||||||||||||
Sbjct: 83850 ttttcactatttgcctttcacca 83828



to top

>gb|AC142143.29| Medicago truncatula clone mth2-25c22, complete sequence
          Length = 124110

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1059  atttattttgttattatttgaac 1081
             |||||||||||||||||||||||
Sbjct: 68724 atttattttgttattatttgaac 68746



to top

>ref|NM_001063087.1| Oryza sativa (japonica cultivar-group) Os06g0104900 (Os06g0104900)
           mRNA, complete cds
          Length = 1508

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 593 caccagcaccgactccggcgac 614
           ||||||||||||||||||||||
Sbjct: 617 caccagcaccgactccggcgac 596



to top

>emb|CT030217.11| Zebrafish DNA sequence from clone DKEY-100G7 in linkage group 7,
             complete sequence
          Length = 88383

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1050  gtactgtgcatttattttgtta 1071
             ||||||||||||||||||||||
Sbjct: 51536 gtactgtgcatttattttgtta 51557



to top

>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome
          Length = 7804765

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 589     tcagcaccagcaccgactccgg 610
               ||||||||||||||||||||||
Sbjct: 6867585 tcagcaccagcaccgactccgg 6867564



to top

>gb|CP000312.1| Clostridium perfringens SM101, complete genome
          Length = 2897393

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 983    ttagctaaaacaagaacttcaacttt 1008
              ||||||||||||||||||||| ||||
Sbjct: 510641 ttagctaaaacaagaacttcatcttt 510616



to top

>gb|CP000246.1| Clostridium perfringens ATCC 13124, complete genome
          Length = 3256683

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 983    ttagctaaaacaagaacttcaacttt 1008
              ||||||||||||||||||||| ||||
Sbjct: 513869 ttagctaaaacaagaacttcatcttt 513844



to top

>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
             complete sequence
          Length = 141715

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 40    tccttcctcctcctcactcccc 61
             ||||||||||||||||||||||
Sbjct: 28421 tccttcctcctcctcactcccc 28400



to top

>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
             complete sequence
          Length = 166218

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 40    tccttcctcctcctcactcccc 61
             ||||||||||||||||||||||
Sbjct: 54262 tccttcctcctcctcactcccc 54241



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 593    caccagcaccgactccggcgac 614
              ||||||||||||||||||||||
Sbjct: 346900 caccagcaccgactccggcgac 346921



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 40       tccttcctcctcctcactcccc 61
                ||||||||||||||||||||||
Sbjct: 27021839 tccttcctcctcctcactcccc 27021818



to top

>emb|AL627187.13| Mouse DNA sequence from clone RP23-319B15 on chromosome 11 Contains the
              3' end of the Rnf130 gene for ring finger protein 130, a
              heterogeneous nuclear ribonucleoprotein A family
              pseudogene, a novel gene, genes 2700008N14Rik and
              3010026O09Rik, the Sqstm1 gene for sequestosome 1, the
              Mgat4b gene for mannoside acetylglucosaminyltransferase 4
              isoenzyme B, the Ltc4s gene for leukotriene C4 synthase and
              four CpG islands, complete sequence
          Length = 201654

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 33     gcctccttccttcctcctcctc 54
              ||||||||||||||||||||||
Sbjct: 173582 gcctccttccttcctcctcctc 173561



to top

>gb|AC010982.5| Homo sapiens BAC clone RP11-475I16 from 2, complete sequence
          Length = 217107

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 32     cgcctccttccttcctcctcct 53
              ||||||||||||||||||||||
Sbjct: 195020 cgcctccttccttcctcctcct 194999



to top

>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 983    ttagctaaaacaagaacttcaacttt 1008
              ||||||||||||||||||||| ||||
Sbjct: 544927 ttagctaaaacaagaacttcatcttt 544902



to top

>gb|AC091533.27| Mus musculus strain C57BL/6J chromosome 11 clone rp23-30n4, complete
             sequence
          Length = 192628

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 33    gcctccttccttcctcctcctc 54
             ||||||||||||||||||||||
Sbjct: 82073 gcctccttccttcctcctcctc 82094



to top

>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644B06
          Length = 194509

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 593   caccagcaccgactccggcgac 614
             ||||||||||||||||||||||
Sbjct: 56853 caccagcaccgactccggcgac 56874



to top

>dbj|AK106504.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-F11, full
           insert sequence
          Length = 1508

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 593 caccagcaccgactccggcgac 614
           ||||||||||||||||||||||
Sbjct: 617 caccagcaccgactccggcgac 596



to top

>emb|AL669843.4| Human DNA sequence from clone XXbac-33F23 on chromosome 6, complete
             sequence
          Length = 183384

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 32    cgcctccttccttcctcctcct 53
             ||||||||||||||||||||||
Sbjct: 92954 cgcctccttccttcctcctcct 92933



to top

>gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, complete sequence
          Length = 226167

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 34     cctccttccttcctcctcctcactcc 59
              ||||||||||||||||||||| ||||
Sbjct: 124386 cctccttccttcctcctcctccctcc 124411



to top

>ref|XR_027079.1| PREDICTED: Gallus gallus similar to lymphocyte antigen 64-like
           protein (LOC431584), mRNA
          Length = 2304

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 30  ctcgcctccttccttcctcctcctc 54
           ||||||||||||| |||||||||||
Sbjct: 247 ctcgcctccttccctcctcctcctc 271



to top

>ref|XM_001231358.1| PREDICTED: Gallus gallus hypothetical protein LOC768436
           (LOC768436), mRNA
          Length = 788

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 34  cctccttccttcctcctcctc 54
           |||||||||||||||||||||
Sbjct: 167 cctccttccttcctcctcctc 147



to top

>ref|XM_001234054.1| PREDICTED: Gallus gallus similar to huntingtin-associated protein
            interacting protein (duo) (LOC424253), mRNA
          Length = 10630

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 297  gccgagcagctagcaaagaag 317
            |||||||||||||||||||||
Sbjct: 5758 gccgagcagctagcaaagaag 5738



to top

>gb|AC187320.9| Canis Familiaris chromosome 16, clone XX-49O13, complete sequence
          Length = 163370

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 24179 cctccttccttcctcctcctc 24159



to top

>gb|AC190398.1| Gallus gallus BAC clone CH261-55O13 from chromosome z, complete sequence
          Length = 204942

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 30     ctcgcctccttccttcctcctcctc 54
              ||||||||||||| |||||||||||
Sbjct: 116540 ctcgcctccttccctcctcctcctc 116516



to top

>emb|CR753895.24| Zebrafish DNA sequence from clone DKEYP-114A12 in linkage group 17,
              complete sequence
          Length = 173508

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1054   tgtgcatttattttgttatta 1074
              |||||||||||||||||||||
Sbjct: 122815 tgtgcatttattttgttatta 122835



to top

>gb|DQ483303.1| Gymnogyps californianus contig 6H genomic sequence
          Length = 387

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 34  cctccttccttcctcctcctc 54
           |||||||||||||||||||||
Sbjct: 229 cctccttccttcctcctcctc 249



to top

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1061  ttattttgttattatttgaac 1081
             |||||||||||||||||||||
Sbjct: 18798 ttattttgttattatttgaac 18818



to top

>emb|CT025611.16| Mouse DNA sequence from clone RP24-100P15 on chromosome 12, complete
              sequence
          Length = 240699

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 157458 cctccttccttcctcctcctc 157438



to top

>gb|DQ027982.1| Brotulina fusca cytochrome c oxidase subunit I (COI) gene, partial
           cds; mitochondrial
          Length = 634

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 34  cctccttccttcctcctcctc 54
           |||||||||||||||||||||
Sbjct: 256 cctccttccttcctcctcctc 276



to top

>gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosome 16, complete
            sequence
          Length = 197843

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 34   cctccttccttcctcctcctc 54
            |||||||||||||||||||||
Sbjct: 3340 cctccttccttcctcctcctc 3320



to top

>gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, complete sequence
          Length = 188758

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1056   tgcatttattttgttattatt 1076
              |||||||||||||||||||||
Sbjct: 147761 tgcatttattttgttattatt 147741



to top

>gb|AF019413.1|HSMHCT8S22 Homo sapiens HLA class III region containing tenascin X (tenascin-X)
             gene, partial cds; cytochrome P450 21-hydroxylase
             (CYP21B), complement component C4 (C4B) G11, helicase
             (SKI2W), RD, complement factor B (Bf), and  complement
             component C2 (C2) genes, complete cds
          Length = 109646

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 46318 cctccttccttcctcctcctc 46338



to top

>gb|AC127241.3| Mus musculus BAC clone RP24-403D23 from chromosome 16, complete
             sequence
          Length = 146434

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 61629 cctccttccttcctcctcctc 61649



to top

>gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome 9, complete sequence
          Length = 226187

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 28554 cctccttccttcctcctcctc 28534



to top

>gb|AC166104.4| Mus musculus BAC clone RP23-320G7 from chromosome 15, complete sequence
          Length = 209081

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 876    tcaaaacaacttattttcact 896
              |||||||||||||||||||||
Sbjct: 197078 tcaaaacaacttattttcact 197058



to top

>gb|AC116799.9| Mus musculus chromosome 18, clone RP24-333N14, complete sequence
          Length = 164940

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 34   cctccttccttcctcctcctc 54
            |||||||||||||||||||||
Sbjct: 3678 cctccttccttcctcctcctc 3658



to top

>gb|AC146606.2| Mus musculus BAC clone RP23-277P7 from chromosome 15, complete sequence
          Length = 171208

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 876    tcaaaacaacttattttcact 896
              |||||||||||||||||||||
Sbjct: 151680 tcaaaacaacttattttcact 151700



to top

>gb|AC122476.4| Mus musculus BAC clone RP24-334L2 from chromosome 18, complete sequence
          Length = 200538

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 91300 cctccttccttcctcctcctc 91320



to top

>gb|AC130221.4| Mus musculus BAC clone RP23-168E11 from chromosome 5, complete sequence
          Length = 200384

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 124877 cctccttccttcctcctcctc 124897



to top

>gb|AC133190.2| Mus musculus BAC clone RP23-375H9 from chromosome 10, complete sequence
          Length = 151273

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 99080 cctccttccttcctcctcctc 99060



 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 99242 cctccttccttcctcctcctc 99222



 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 99320 cctccttccttcctcctcctc 99300



to top

>gb|AC125058.4| Mus musculus BAC clone RP23-400N6 from chromosome 14, complete sequence
          Length = 195696

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 36     tccttccttcctcctcctcactccc 60
              ||||||||||||||||||| |||||
Sbjct: 106221 tccttccttcctcctcctccctccc 106245



to top

>gb|AC132588.4| Mus musculus BAC clone RP24-258L16 from chromosome 10, complete sequence
          Length = 136807

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 133226 cctccttccttcctcctcctc 133206



to top

>gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, complete sequence
          Length = 190816

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 37639 cctccttccttcctcctcctc 37619



to top

>gb|AC103982.10| Homo sapiens chromosome 15, clone RP11-343B18, complete sequence
          Length = 197370

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 639    aactgggctccttctgtccag 659
              |||||||||||||||||||||
Sbjct: 157651 aactgggctccttctgtccag 157671



to top

>gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complete sequence
          Length = 161566

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 94326 cctccttccttcctcctcctc 94346



to top

>gb|AC154171.5| Mus musculus BAC clone RP24-259F16 from chromosome 13, complete sequence
          Length = 173300

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 104320 cctccttccttcctcctcctc 104300



to top

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 13      ttggcagcagacagcagctcg 33
               |||||||||||||||||||||
Sbjct: 2995442 ttggcagcagacagcagctcg 2995422



to top

>gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosome 10, complete
             sequence
          Length = 205283

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 26584 cctccttccttcctcctcctc 26564



 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 26746 cctccttccttcctcctcctc 26726



 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 26824 cctccttccttcctcctcctc 26804



to top

>dbj|AK134343.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030433K21
            product:unclassifiable, full insert sequence
          Length = 2970

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 986  gctaaaacaagaacttcaact 1006
            |||||||||||||||||||||
Sbjct: 2210 gctaaaacaagaacttcaact 2190



to top

>gb|AC160463.5| Mus musculus chromosome 1, clone RP23-266D4, complete sequence
          Length = 167352

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 132644 cctccttccttcctcctcctc 132624



to top

>gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence
          Length = 185644

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 36    tccttccttcctcctcctcactccc 60
             ||||||||||||||||||| |||||
Sbjct: 15019 tccttccttcctcctcctccctccc 15043



to top

>gb|AC161583.2| Mus musculus BAC clone RP24-566C13 from chromosome 12, complete
             sequence
          Length = 171366

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 32673 cctccttccttcctcctcctc 32693



to top

>gb|AC154492.2| Mus musculus BAC clone RP24-107B10 from chromosome 17, complete sequence
          Length = 172605

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     ctccttccttcctcctcctca 55
              |||||||||||||||||||||
Sbjct: 126092 ctccttccttcctcctcctca 126072



to top

>emb|CT025527.7| Mouse DNA sequence from clone RP23-279J20 on chromosome 16, complete
             sequence
          Length = 202976

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 41    ccttcctcctcctcactcccc 61
             |||||||||||||||||||||
Sbjct: 72338 ccttcctcctcctcactcccc 72358



to top

>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE
          Length = 114811

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 991   aacaagaacttcaactttgtt 1011
             |||||||||||||||||||||
Sbjct: 94925 aacaagaacttcaactttgtt 94945



to top

>emb|AL662849.8| Human DNA sequence from clone XXbac-116I9 on chromosome 6 contains the
             C2 gene for complement component 2, the Bf gene for
             B-factor, properdin, the RDBP gene for RD RNA-binding
             protein, the SKIV2L gene for superkiller viralicidic
             activity 2-like (S. cerevisiae), the DOM3Z gene for dom-3
             homolog Z (C. elegans), the STK19 gene for
             serine/threonine kinase 19, the C4A gene for complement
             component 4B, the 3' end of the CYP21A2 gene for
             cytochrome P450, subfamily XXIA (steroid 21-hydroxylase,
             congenital adrenal hyperplasia), polypeptide 2 and four
             CpG islands, complete sequence
          Length = 88459

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 65400 cctccttccttcctcctcctc 65380



to top

>gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, complete sequence
          Length = 193681

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 36    tccttccttcctcctcctcactccc 60
             ||||||||||||||||||| |||||
Sbjct: 90536 tccttccttcctcctcctccctccc 90560



to top

>gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, complete sequence
          Length = 135968

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 655   tccagccattcagctggatga 675
             |||||||||||||||||||||
Sbjct: 44250 tccagccattcagctggatga 44270



to top

>gb|AC027672.12| Homo sapiens chromosome 10 clone RP11-198M6, complete sequence
          Length = 187229

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 36    tccttccttcctcctcctcactcccccct 64
             ||||||||||||| ||||| |||||||||
Sbjct: 61916 tccttccttcctcttcctccctcccccct 61888



 Score = 42.1 bits (21), Expect = 4.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 36    tccttccttcctcctcctcactcccccct 64
             ||||||||||||| ||||| |||||||||
Sbjct: 61979 tccttccttcctcttcctccctcccccct 61951



 Score = 42.1 bits (21), Expect = 4.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 36    tccttccttcctcctcctcactcccccct 64
             ||||||||||||| ||||| |||||||||
Sbjct: 62042 tccttccttcctcttcctccctcccccct 62014



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 975      atctttgattagctaaaacaa 995
                |||||||||||||||||||||
Sbjct: 10754101 atctttgattagctaaaacaa 10754081



to top

>emb|CR753845.11| Human DNA sequence from clone DADB-112B14 on chromosome 6, complete
             sequence
          Length = 96090

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 24358 cctccttccttcctcctcctc 24338



to top

>emb|AL844853.23| Human DNA sequence from clone DAQB-331I12 on chromosome 6 Contains the
              NEU1 gene for sialidase 1 (lysosomal sialidase), the
              C6orf29 gene for chromosome 6 open reading frame 29, the
              BAT8 gene for HLA-B associated transcript 8, a novel
              transcript DAQB-331I12.5, the ZBTB12 gene (previously
              C6orf46) for zinc finger and BTB domain containing 12, the
              C2 gene for complement component 2, the Bf gene for
              B-factor, properdin, the RDBP gene for RD RNA binding
              protein, the SKIV2L gene for superkiller viralicidic
              activity 2-like (S. cerevisiae), the DOM3Z gene for dom-3
              homolog Z (C. elegans), the STK19 gene for serine/threonine
              kinase 19, the 5' end of the C4A gene for complement
              component 4A and 8 CpG isalnds, complete sequence
          Length = 153464

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 133357 cctccttccttcctcctcctc 133337



to top

>emb|AL358492.19| Human DNA sequence from clone RP11-340B24 on chromosome 1 Contains a
              heat shock 10kDa protein 1 (chaperonin 10) (HSPE1)
              pseudogene, the gene for a novel protein (FLJ37118,
              FLJ37833) and a cofilin 1 (non-muscle) (CFL1) pseudogene,
              complete sequence
          Length = 135992

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 102955 cctccttccttcctcctcctc 102975



to top

>emb|AL355298.11| Human DNA sequence from clone RP11-781P14 on chromosome 10 Contains a
             ribosomal protein L3 (RPL3) pseudogene, a
             nascent-polypeptide-associated complex alpha polypeptide
             (NACA) pseudogene, the 3' end of the SEC23IP gene for
             SEC23 interacting protein and one CpG island, complete
             sequence
          Length = 162166

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 36    tccttccttcctcctcctcactcccccct 64
             ||||||||||||| ||||| |||||||||
Sbjct: 17730 tccttccttcctcttcctccctcccccct 17758



 Score = 42.1 bits (21), Expect = 4.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 36    tccttccttcctcctcctcactcccccct 64
             ||||||||||||| ||||| |||||||||
Sbjct: 17793 tccttccttcctcttcctccctcccccct 17821



 Score = 42.1 bits (21), Expect = 4.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 36    tccttccttcctcctcctcactcccccct 64
             ||||||||||||| ||||| |||||||||
Sbjct: 17856 tccttccttcctcttcctccctcccccct 17884



to top

>gb|AC067805.9| Homo sapiens chromosome 15, clone RP11-63A23, complete sequence
          Length = 170883

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 639   aactgggctccttctgtccag 659
             |||||||||||||||||||||
Sbjct: 41056 aactgggctccttctgtccag 41076



to top

>gb|AC157652.3| Mus musculus BAC clone RP24-324J2 from chromosome 10, complete sequence
          Length = 191096

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 128221 cctccttccttcctcctcctc 128201



to top

>emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 7
          Length = 201471

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1064  ttttgttattatttgaactat 1084
             |||||||||||||||||||||
Sbjct: 26664 ttttgttattatttgaactat 26684



to top

>ref|NM_001427.2| Homo sapiens engrailed homolog 2 (EN2), mRNA
          Length = 4793

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 34   cctccttccttcctcctcctc 54
            |||||||||||||||||||||
Sbjct: 3465 cctccttccttcctcctcctc 3485



to top

>emb|AL645922.11| Human DNA sequence from clone XXbac-116M5 on chromosome 6 contains the
             C2 gene for complement component 2 (C2, CO2), the Bf gene
             for B-factor, properdin (Bf, GBG, CFAB, PBF2), the RDBP
             gene for RD RNA-binding protein (RDBP, RD, RDP, D6S45,
             NELF-E), the SKIV2L gene for superkiller viralicidic
             activity 2-like (S. cerevisiae) (SKIV2L, HLP, SKI2, DDX13,
             SKI2W, SKIV2), the DOM3Z gene for dom-3 homolog Z (C.
             elegans) (DOM3Z, NG6, DOM3L), the STK19 gene for
             serine/threonine kinase 19 (STK19, G11, RP1, D6S60,
             D6S60E, HLA-RP1), the C4A gene for complement component 4A
             (C4A, C4S, CO4), a cytochrome P450, subfamily XXIA
             (steroid 21-hydroxylase), polypeptide 1 pseudogene
             (CYP21A1P), a tenascin XA pseudogene (TNXA, XA, XB, TNX,
             HXBL, D6S103E), a serine/threonine kinase 19 (STK19, G11,
             RP1, D6S60, D6S60E, HLA-RP1) pseudogene, the C4B gene for
             complement component 4B (C4B, C4F, CO4), the CYP21A2 gene
             for cytochrome P450, subfamily XXIA (steroid
             21-hydroxylase, congenital adrenal hyperplasia),
             polypeptide 2 (CYP21A2, CAH1, CPS1, CA21H, CYP21, CYP21B,
             P450c21B), the 3' end of the TNXB gene for tenascin XB
             (TNXB, XB, TNX, XBS, HXBL, TENX, TNXB1, TNXB2, TNXBS) and
             four CpG islands, complete sequence
          Length = 180559

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 75499 cctccttccttcctcctcctc 75479



to top

>emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 45
          Length = 199548

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1064  ttttgttattatttgaactat 1084
             |||||||||||||||||||||
Sbjct: 12493 ttttgttattatttgaactat 12513



to top

>emb|AL049547.10|HSDJ34F7 Human DNA sequence from clone RP1-34F7 on chromosome 6p21.2-21.33
              Contains the 3' end of the gene for CREB-RP (G13), the gene
              for tenascin XB and XA, the CYP21A2 gene for cytochrome
              P450, subfamily XXIA (steroid 21-hydroxylase), polypeptide
              2 (CYP21, P450c21B), the C4A gene for complement component
              4A, the gene for RP MHC class III complement protein (G11),
              the DOM3Z gene for DOM-3 (C. elegans) homolog Z, the SKIV2L
              gene for superkiller viralicidic activity 2 (S. cerevisiae
              homolog)-like (SKI2W) and the gene for RD (RDBP). Contains
              ESTs, STSs, GSSs and five putative CpG islands, complete
              sequence
          Length = 129811

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 106745 cctccttccttcctcctcctc 106765



to top

>gb|AC153881.4| Mus musculus 10 BAC RP23-257B9 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 208992

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 91242 cctccttccttcctcctcctc 91222



to top

>gb|AC160409.6| Mus musculus 10 BAC RP23-184O11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209766

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 190929 cctccttccttcctcctcctc 190949



to top

>emb|CR759782.7| Human DNA sequence from clone DAMC-178C20 on chromosome 6, complete
             sequence
          Length = 79825

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 77008 cctccttccttcctcctcctc 76988



to top

>emb|BX005243.3| Mouse DNA sequence from clone RP23-269L17 on chromosome 11,
           complete sequence
          Length = 72576

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 34  cctccttccttcctcctcctc 54
           |||||||||||||||||||||
Sbjct: 385 cctccttccttcctcctcctc 365



to top

>emb|AL645566.15| Mouse DNA sequence from clone RP23-398M13 on chromosome 11 Contains a CpG
              island, complete sequence
          Length = 192808

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 191193 cctccttccttcctcctcctc 191173



to top

>emb|AL954244.1| Pan troglodytes chromosome 22 clone PTB-060F03 map 22q22.3, complete
             sequence
          Length = 151449

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 99564 cctccttccttcctcctcctc 99584



to top

>emb|AL954243.1| Pan troglodytes chromosome 22 clone PTB-111H18 map 22q22.3, complete
              sequence
          Length = 216379

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 118649 cctccttccttcctcctcctc 118669



to top

>gb|AC154205.1| Mus musculus BAC clone RP24-88I1 from chromosome 14, complete sequence
          Length = 219623

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 116051 cctccttccttcctcctcctc 116031



to top

>gb|L26261.1|HUMMHRP1B Human MHC class III HLA-RP1 gene
          Length = 12120

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 34   cctccttccttcctcctcctc 54
            |||||||||||||||||||||
Sbjct: 9149 cctccttccttcctcctcctc 9129



to top

>gb|AC154767.2| Mus musculus BAC clone RP23-105P19 from chromosome 13, complete
             sequence
          Length = 189362

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 48013 cctccttccttcctcctcctc 47993



to top

>gb|AC156497.2| Mus musculus BAC clone RP24-351K2 from chromosome 9, complete sequence
          Length = 174877

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 166186 cctccttccttcctcctcctc 166166



to top

>gb|AC092839.4| Homo sapiens BAC clone RP11-257N16 from 2, complete sequence
          Length = 186464

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 36     tccttccttcctcctcctcac 56
              |||||||||||||||||||||
Sbjct: 182364 tccttccttcctcctcctcac 182344



to top

>gb|AC006205.9| Homo sapiens 12 PAC RP5-1154L15 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 120084

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    gcctccttccttcctcctcct 53
             |||||||||||||||||||||
Sbjct: 52348 gcctccttccttcctcctcct 52328



to top

>gb|AC021054.28| Homo sapiens 12 BAC RP11-218M22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 174231

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     gcctccttccttcctcctcct 53
              |||||||||||||||||||||
Sbjct: 173119 gcctccttccttcctcctcct 173099



to top

>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1115_D03
          Length = 169378

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 975   atctttgattagctaaaacaa 995
             |||||||||||||||||||||
Sbjct: 93582 atctttgattagctaaaacaa 93562



to top

>emb|BX679671.7| Human DNA sequence from clone DASS-307J8 on chromosome 6, complete
            sequence
          Length = 96335

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 34   cctccttccttcctcctcctc 54
            |||||||||||||||||||||
Sbjct: 7124 cctccttccttcctcctcctc 7104



to top

>emb|BX571960.6| Zebrafish DNA sequence from clone DKEY-165I8 in linkage group 3, complete
              sequence
          Length = 192501

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1056   tgcatttattttgttattatt 1076
              |||||||||||||||||||||
Sbjct: 150796 tgcatttattttgttattatt 150776



to top

>emb|BX936373.1| Human DNA sequence from clone DASS-307J8 on chromosome 6, complete
            sequence
          Length = 36539

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 34   cctccttccttcctcctcctc 54
            |||||||||||||||||||||
Sbjct: 7124 cctccttccttcctcctcctc 7104



to top

>gb|L12701.1|HUMEN2A02 Homo sapiens engrailed protein (EN2) gene, exon 2 and complete cds
          Length = 2440

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 34   cctccttccttcctcctcctc 54
            |||||||||||||||||||||
Sbjct: 1112 cctccttccttcctcctcctc 1132



to top

>gb|AC154631.2| Mus musculus BAC clone RP23-264F8 from 16, complete sequence
          Length = 201820

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 41    ccttcctcctcctcactcccc 61
             |||||||||||||||||||||
Sbjct: 24037 ccttcctcctcctcactcccc 24017



to top

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1061  ttattttgttattatttgaac 1081
             |||||||||||||||||||||
Sbjct: 39774 ttattttgttattatttgaac 39794



to top

>gb|AC117771.17| Mus musculus chromosome 1, clone RP24-512A5, complete sequence
          Length = 161292

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1056  tgcatttattttgttattatt 1076
             |||||||||||||||||||||
Sbjct: 50086 tgcatttattttgttattatt 50106



to top

>gb|AC006276.1|AC006276 Homo sapiens chromosome 19, cosmid R28379, complete sequence
          Length = 38253

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    ctcgcctccttccttcctcct 50
             |||||||||||||||||||||
Sbjct: 19316 ctcgcctccttccttcctcct 19296



to top

>gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome 5, complete sequence
          Length = 236596

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 34   cctccttccttcctcctcctc 54
            |||||||||||||||||||||
Sbjct: 4005 cctccttccttcctcctcctc 3985



to top

>emb|CT573094.2| Macaca mulatta chromosome 9 CH250-64B17, complete sequence
          Length = 144218

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1053  ctgtgcatttattttgttattattt 1077
             ||||||||||||||| |||||||||
Sbjct: 69625 ctgtgcatttatttttttattattt 69601



to top

>emb|CR955004.2| Medicago truncatula chromosome 5 clone mte1-9e19, COMPLETE SEQUENCE
          Length = 116493

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1061  ttattttgttattatttgaac 1081
             |||||||||||||||||||||
Sbjct: 98527 ttattttgttattatttgaac 98507



to top

>emb|AL603743.8| Zebrafish DNA sequence from clone RP71-98D8 Contains the putative novel
             retrotransposon GYPSYDR2, the putative transposon TC1DR1
             similar to C. elegans transposons and four CpG islands,
             complete sequence
          Length = 100214

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 891   ttcactatttgcctttcacca 911
             |||||||||||||||||||||
Sbjct: 90593 ttcactatttgcctttcacca 90573



to top

>emb|CT573020.1| Medicago truncatula chromosome 5 clone mth2-83i12, COMPLETE SEQUENCE
          Length = 92109

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1061 ttattttgttattatttgaac 1081
            |||||||||||||||||||||
Sbjct: 4994 ttattttgttattatttgaac 4974



to top

>gb|AY722141.1| Eleotris amblyopsis isolate C cytochrome oxidase subunit I (COXI)
           gene, partial cds; mitochondrial
          Length = 1255

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 34  cctccttccttcctcctcctc 54
           |||||||||||||||||||||
Sbjct: 305 cctccttccttcctcctcctc 325



to top

>gb|AY722136.1| Eleotris amblyopsis isolate A cytochrome oxidase subunit I (COXI)
           gene, partial cds; mitochondrial
          Length = 1255

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 34  cctccttccttcctcctcctc 54
           |||||||||||||||||||||
Sbjct: 305 cctccttccttcctcctcctc 325



to top

>emb|AL611986.15| Mouse DNA sequence from clone RP23-74I9 on chromosome 15, complete
             sequence
          Length = 191808

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 33226 cctccttccttcctcctcctc 33206



to top

>emb|AL596331.15| Mouse DNA sequence from clone RP23-81G14 on chromosome 11, complete
             sequence
          Length = 228391

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cctccttccttcctcctcctc 54
             |||||||||||||||||||||
Sbjct: 51721 cctccttccttcctcctcctc 51701



to top

>emb|AL596246.10| Mouse DNA sequence from clone RP23-186E14 on chromosome 11, complete
              sequence
          Length = 144136

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     cctccttccttcctcctcctc 54
              |||||||||||||||||||||
Sbjct: 114741 cctccttccttcctcctcctc 114721



to top

>gb|U24578.1|HSU24578 Human RP1 and complement C4B precursor (C4B) genes, partial cds
          Length = 17488

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 34  cctccttccttcctcctcctc 54
           |||||||||||||||||||||
Sbjct: 316 cctccttccttcctcctcctc 296



to top

>dbj|AB001869.1| Anolis carolinensis Brain-2 gene, complete cds
          Length = 2954

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 34   cctccttccttcctcctcctc 54
            |||||||||||||||||||||
Sbjct: 2310 cctccttccttcctcctcctc 2290



to top

>emb|AL645535.16| Mouse DNA sequence from clone RP23-145G23 on chromosome 11, complete
              sequence
          Length = 161363

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 36     tccttccttcctcctcctcactcccccct 64
              |||||||||||||||||||  ||||||||
Sbjct: 137518 tccttccttcctcctcctccttcccccct 137546


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 191,964,744
Number of extensions: 12287070
Number of successful extensions: 296094
Number of sequences better than 10.0: 117
Number of HSP's gapped: 296081
Number of HSP's successfully gapped: 131
Length of query: 1109
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1086
Effective length of database: 18,503,978,556
Effective search space: 20095320711816
Effective search space used: 20095320711816
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top