ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf43l07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073341:Os05g0102500 | 44 | 2e-04 | 2 | AK063894:Os05g0102500 | 44 | 2e-04 | 3 | AK122024:Os03g0172000 | 33 | 0.22 | 4 | AK073393:Os03g0172000 | 33 | 0.22 | 5 | Os01g0348300:Os01g0348300 | 32 | 0.50 | 6 | Os03g0217600:Os03g0217600 | 32 | 0.65 | 7 | AF251071:Os11g0199700 | 32 | 0.65 | 8 | AK073816:Os11g0199700 | 32 | 0.65 | 9 | Os02g0770500:Os02g0770500 | 32 | 0.85 | 10 | AK120760:Os01g0930200 | 31 | 1.4 | 11 | AK060467:Os03g0752100 | 30 | 3.2 | 12 | AK110188: | 29 | 4.2 | 13 | Os08g0367000:Os08g0367000 | 29 | 5.5 | 14 | Os08g0170100:Os08g0170100 | 28 | 9.4 |
|---|
>AK073341:Os05g0102500 | Length = 166 Score = 43.5 bits (101), Expect = 2e-04 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 21/82 (25%) Frame = +2 Query: 368 ESRDGAIRCPIPCKSS-----------RPYREYDFKAAQDLSDFIVSKASPP-------- 490 +S+ + CP+P + S R Y +A D+ D I+SK P Sbjct: 30 DSQPTELICPMPRRPSPRPPFLSDSINRTLPVYRADSASDVLDLILSKNDPDVDTDSSTQ 89 Query: 491 --YFMGSPPVRASNPLVNDRQF 550 +F GSPPVRA+NP+V+D QF Sbjct: 90 VGFFCGSPPVRANNPIVHDPQF 111
>AK063894:Os05g0102500 | Length = 166 Score = 43.5 bits (101), Expect = 2e-04 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 21/82 (25%) Frame = +2 Query: 368 ESRDGAIRCPIPCKSS-----------RPYREYDFKAAQDLSDFIVSKASPP-------- 490 +S+ + CP+P + S R Y +A D+ D I+SK P Sbjct: 30 DSQPTELICPMPRRPSPRPPFLSDSINRTLPVYRADSASDVLDLILSKNDPDVDTDSSTQ 89 Query: 491 --YFMGSPPVRASNPLVNDRQF 550 +F GSPPVRA+NP+V+D QF Sbjct: 90 VGFFCGSPPVRANNPIVHDPQF 111
>AK122024:Os03g0172000 | Length = 1005 Score = 33.5 bits (75), Expect = 0.22 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Frame = -1 Query: 601 WYRNAE*LINALYFPSTELSVIDKRIACTNWRRSHEVWRRSLAHN--------KIGEILS 446 W +A L N Y + S ++ I C NW+++H ++ S+AH+ +I +I S Sbjct: 815 WMHDALALYNEYY--GDQQSALENYILCGNWKKAHTIFMTSIAHSLFLSSKHQEIWDITS 872 Query: 445 SFKI 434 S ++ Sbjct: 873 SLEV 876
>AK073393:Os03g0172000 | Length = 644 Score = 33.5 bits (75), Expect = 0.22 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Frame = -1 Query: 601 WYRNAE*LINALYFPSTELSVIDKRIACTNWRRSHEVWRRSLAHN--------KIGEILS 446 W +A L N Y + S ++ I C NW+++H ++ S+AH+ +I +I S Sbjct: 454 WMHDALALYNEYY--GDQQSALENYILCGNWKKAHTIFMTSIAHSLFLSSKHQEIWDITS 511 Query: 445 SFKI 434 S ++ Sbjct: 512 SLEV 515
>Os01g0348300:Os01g0348300 | Length = 163 Score = 32.3 bits (72), Expect = 0.50 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = -1 Query: 184 QQGPGARRRWREGAGQASEGGRDVENRERLAGERSGEEE 68 ++G G R+RWREG EGG D GE SGE E Sbjct: 88 REGGGERQRWREGVEVGVEGGGDG------GGEGSGEVE 120
>Os03g0217600:Os03g0217600 | Length = 120 Score = 32.0 bits (71), Expect = 0.65 Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 6/53 (11%) Frame = -1 Query: 208 KKEGRCFTQQGPGARRRWREGAGQASEGGRDVENRE------RLAGERSGEEE 68 + GR + G RRRWR G G A D E RE R AG R GE E Sbjct: 8 RSSGRRRGWRSDGFRRRWRGGRGAARPEKDDGEVRERGGCAARNAGRREGEME 60
>AF251071:Os11g0199700 | Length = 287 Score = 32.0 bits (71), Expect = 0.65 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Frame = +2 Query: 332 RTERMMEDYQNTESRDGAIRCPIPCKS---SRPYREYDFKAAQDLSDFIVSKASPPYFMG 502 +TE++ +D+ N + P P S + P YD ++ DFI A+P + M Sbjct: 158 KTEKVSDDFINPTA---PANIPAPSHSKTETNPPPSYDSRSESVSDDFINPTAAPSFSMP 214 Query: 503 SPPVRASN-PLVNDRQ 547 S P+ SN P VN ++ Sbjct: 215 SRPMSESNRPAVNRQE 230
>AK073816:Os11g0199700 | Length = 588 Score = 32.0 bits (71), Expect = 0.65 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Frame = +2 Query: 332 RTERMMEDYQNTESRDGAIRCPIPCKS---SRPYREYDFKAAQDLSDFIVSKASPPYFMG 502 +TE++ +D+ N + P P S + P YD ++ DFI A+P + M Sbjct: 379 KTEKVSDDFINPTA---PANIPAPSHSKTETNPPPSYDSRSESVSDDFINPTAAPSFSMP 435 Query: 503 SPPVRASN-PLVNDRQ 547 S P+ SN P VN ++ Sbjct: 436 SRPMSESNRPAVNRQE 451
>Os02g0770500:Os02g0770500 | Length = 637 Score = 31.6 bits (70), Expect = 0.85 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -1 Query: 184 QQGPGARRRWREGAGQASEGGRDVENRERLAGERSGEEEPV 62 ++G G+ R +GA A+E DV+ RE E GEEE V Sbjct: 85 ERGGGSDREASDGAAAAAEEDGDVKQREGPKEETGGEEEKV 125
>AK120760:Os01g0930200 | Length = 172 Score = 30.8 bits (68), Expect = 1.4 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +2 Query: 494 FMGSPPVRASNPLVNDRQF 550 F GSPP RA NPLV+D F Sbjct: 80 FGGSPPARADNPLVHDPHF 98
>AK060467:Os03g0752100 | Length = 229 Score = 29.6 bits (65), Expect = 3.2 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -3 Query: 305 PWFHHHGVRNLFGSCNLLKD*RRSSDSPYPCREKGRKMLHST 180 PW+ RNL +L ++ R+ S C+E+ +K+LH T Sbjct: 4 PWYSDQTSRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDT 45
>AK110188: | Length = 954 Score = 29.3 bits (64), Expect = 4.2 Identities = 25/56 (44%), Positives = 27/56 (48%) Frame = -1 Query: 241 DAHQILHTHVAKKEGRCFTQQGPGARRRWREGAGQASEGGRDVENRERLAGERSGE 74 DAH + A G G A RR EGAG A GGR E+RER G R GE Sbjct: 120 DAHAVESEEGANNGGIIGGALGGFAPRR--EGAG-ARFGGRRNEDRERSEGLRLGE 172
>Os08g0367000:Os08g0367000 | Length = 2245 Score = 28.9 bits (63), Expect = 5.5 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -1 Query: 247 IDDAHQILHTHVAKKEGRCF--TQQGPGARRRWREGAGQASEGGRDVENRERLAGERS 80 ID A I + EG+ ++G G RRR R+G G G D + E L RS Sbjct: 56 IDSAQAIFELKLQNSEGKNIKVNREGEGKRRRGRKGEGDIVGVGVDGKADEELRRMRS 113
>Os08g0170100:Os08g0170100 | Length = 981 Score = 28.1 bits (61), Expect = 9.4 Identities = 9/21 (42%), Positives = 16/21 (76%) Frame = -1 Query: 244 DDAHQILHTHVAKKEGRCFTQ 182 DD+ ++L+T +A EG+C T+ Sbjct: 334 DDSEKLLYTRIASAEGKCLTR 354 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 22,310,913 Number of extensions: 453440 Number of successful extensions: 1540 Number of sequences better than 10.0: 14 Number of HSP's gapped: 1540 Number of HSP's successfully gapped: 14 Length of query: 316 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 215 Effective length of database: 11,355,714 Effective search space: 2441478510 Effective search space used: 2441478510 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
