ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf43l07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P13808:B3A2_MOUSE Anion exchange protein 2 - Mus musculus (Mouse) 32 2.9
2O80770:SPT52_ARATH Putative transcription elongation factor SPT5... 31 8.4
3P48746:B3A2_RABIT Anion exchange protein 2 - Oryctolagus cunicul... 31 8.4

>P13808:B3A2_MOUSE Anion exchange protein 2 - Mus musculus (Mouse)|
          Length = 1237
 Score = 32.3 bits (72), Expect = 2.9
 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
 Frame = -1

Query: 235 HQILHTHVAKKEGRCFTQQGPGARRRWREGAGQA------SEGGRDVENRERLAGERSGE 74
           H  L TH+     R  T QGPG + R R GA          EG  D E      G R+  
Sbjct: 81  HHPLSTHLPPDARRRKTPQGPGRKPRRRPGASPTGETPTIEEGEEDEEEASEAEGFRAPP 140

Query: 73  EEP 65
           ++P
Sbjct: 141 QQP 143



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>O80770:SPT52_ARATH Putative transcription elongation factor SPT5 homolog 2 -|
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 990

 Score = 30.8 bits (68), Expect = 8.4
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
 Frame = +2

Query: 245 NPSAGYNFQRGFERRGD----GTMEEMK-ELKKQRTERMMEDYQNTESRDGAIRCPIPCK 409
           NP AG   Q G  RRGD    GT  +++    K  + R++      E +D  +R  +  K
Sbjct: 666 NPGAGGRHQGGRGRRGDDHLVGTYVKIRLGPFKGYSGRLV------EVKDKLVRVELEAK 719

Query: 410 SSRPYREYDFKAAQDLSDFIVSKASPPYFMGS 505
                  ++ KA  D++D +V  A+P Y MGS
Sbjct: 720 IVTGKLHFERKAISDMTDNVV--ATPQYNMGS 749



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>P48746:B3A2_RABIT Anion exchange protein 2 - Oryctolagus cuniculus (Rabbit)|
          Length = 1237

 Score = 30.8 bits (68), Expect = 8.4
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
 Frame = -1

Query: 235 HQILHTHVAKKEGRCFTQQGPGARRRWREGAGQA------SEGGRDVENRERLAGERSGE 74
           H  L TH+     R  T QGPG + R R GA          EG  D E      G R+  
Sbjct: 82  HHPLSTHLPPDARRRKTPQGPGRKPRRRPGASPTGATPTIEEGEEDEEEANEAEGARAPT 141

Query: 73  E 71
           E
Sbjct: 142 E 142


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 135,535,889
Number of extensions: 2639808
Number of successful extensions: 7767
Number of sequences better than 10.0: 3
Number of HSP's gapped: 7766
Number of HSP's successfully gapped: 3
Length of query: 316
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 203
Effective length of database: 69,691,104
Effective search space: 14147294112
Effective search space used: 14147294112
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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