| Clone Name | FLbaf43k23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ000236.1|HVJ000236 Hordeum vulgare mRNA for expressed sequence tag Length = 343 Score = 656 bits (331), Expect = 0.0 Identities = 334/335 (99%) Strand = Plus / Plus Query: 1480 gatgaggagaagatcaataaatagatgatggtcattccatctctctggacccttgttact 1539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gatgaggagaagatcaataaatagatgatggtcattccatctctctggacccttgttact 60 Query: 1540 gtcatggtttaggtcattggcatgttggaaatttgttcaccgtggtggtcctcccagcaa 1599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtcatggtttaggtcattggcatgttggaaatttgttcaccgtggtggtcctcccagcaa 120 Query: 1600 aacaattcccttgtgctcgtggtgtttgttgatctggcctggcccagctcaagttatttg 1659 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aacaattcctttgtgctcgtggtgtttgttgatctggcctggcccagctcaagttatttg 180 Query: 1660 gcacccaataattgcggcatgtgtatagaatttattcatgtattcagtctataagttttg 1719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcacccaataattgcggcatgtgtatagaatttattcatgtattcagtctataagttttg 240 Query: 1720 ccaagccaaaatagtcggtaatacaacattgggcattattggtcttggttttgtgttggt 1779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ccaagccaaaatagtcggtaatacaacattgggcattattggtcttggttttgtgttggt 300 Query: 1780 acttggataagcagcggttggacgtttggtgatcc 1814 ||||||||||||||||||||||||||||||||||| Sbjct: 301 acttggataagcagcggttggacgtttggtgatcc 335
>ref|NM_001073795.1| Oryza sativa (japonica cultivar-group) Os12g0613300 (Os12g0613300) mRNA, complete cds Length = 1672 Score = 268 bits (135), Expect = 7e-68 Identities = 240/275 (87%) Strand = Plus / Plus Query: 646 aggctagaaaatatcatactggaggccgtgaagaccttgaatgaacctacagggtcatac 705 |||||||| ||||||||| | ||||| || | || ||||||||| ||||||||||||||| Sbjct: 709 aggctagacaatatcatagtagaggcagtaaggagcttgaatgagcctacagggtcatac 768 Query: 706 aaaacagccgttgctaattacatagaggaacaatactggccacctgctgattttgatcat 765 || |||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 769 aagacagccatagctaattacatagaggagcaatactggcctcctgctgattttgatcat 828 Query: 766 gtactgtctgcaaaactgaatgagttgacatcatctggcaaattgatgaaggtgaatcgg 825 || |||||| ||||||||||||| ||||| ||||||| |||||||| ||||||||||| Sbjct: 829 gtcctgtcttcaaaactgaatgatctgacagcatctgggaaattgataaaggtgaatcga 888 Query: 826 aagtacaggatagcccctagctcgtcttttctagaaggacgaagctccaaaatggtgctg 885 |||||||||||||||||||| || ||||| |||||| |||||||||||| | |||||| Sbjct: 889 aagtacaggatagcccctagttcatctttgtcagaagggcgaagctccaaagtagtgctg 948 Query: 886 cttgatgatataaaaaaggagccaaccaaggtaga 920 || || ||||||||||| || ||||| ||| |||| Sbjct: 949 ctcgaagatataaaaaaagaaccaacaaagttaga 983 Score = 218 bits (110), Expect = 5e-53 Identities = 231/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 967 gatgctgaacttgcacggatgagaaacatgagcgcagaagaggctgcagctgcagccgct 1026 ||||||||| | || |||||||||| ||||| |||||||||||||| ||||| || ||| Sbjct: 1021 gatgctgaattagctcggatgagaaccatgactgcagaagaggctgctgctgctgctgct 1080 Query: 1027 cgtgcggttgctgaggcggacgctatcatggcggaagctgaagccgcagtgagagaagcg 1086 ||||| ||||| ||||| || ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 1081 cgtgcagttgcagaggcagaagctatcatggctgaagccgaagctgcagtaagagaagca 1140 Query: 1087 gaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagcaatgttgacc 1146 ||||||||||||||||||||||||||||||||||| || ||||| ||||||||| || Sbjct: 1141 gaggctgcagaagctgatgctgtagctgcacaagctttcgcggaggcagcaatggcaaca 1200 Query: 1147 ttaaaaaacaggagttcagcaaaactgatcattcgaggttgagacatcttgtgggagctg 1206 || |||||||| |||||||||||| |||||||||||| |||| | | ||||||||||| Sbjct: 1201 tttaaaaacagaagttcagcaaaattgatcattcgagcttgaagctacctgtgggagctg 1260 Query: 1207 cttcagcatccgctttcctctgaccttgtt 1236 | ||||||| | ||||||| ||||||||| Sbjct: 1261 gtgcagcatcag-tttcctccgaccttgtt 1289 Score = 206 bits (104), Expect = 2e-49 Identities = 167/188 (88%) Strand = Plus / Plus Query: 265 atgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgggata 324 ||||| || ||||||||||| ||||| |||||||||||| | || |||||||||||||| Sbjct: 349 atgggtgccccgaagcagaaatggaccgcggaggaggagtccgccctcaaggccgggatc 408 Query: 325 ggcaagcacggggccgggaaatggcgcaccatactcaaggaccccgagttcagcaacatc 384 | ||||||||||| ||||||||||||||||||||||| ||||| || ||||||||| || Sbjct: 409 gcaaagcacggggctgggaaatggcgcaccatactcaaagacccagacttcagcaacgtc 468 Query: 385 ctgcgctaccgctccaacgttgacctcaaggacaagtggaggaacatgaatgtcacagtg 444 ||||||||||||||||| ||||||||||||||||| ||| |||||||||| || || ||| Sbjct: 469 ctgcgctaccgctccaatgttgacctcaaggacaaatggcggaacatgaacgtaaccgtg 528 Query: 445 aacgcgtc 452 |||||||| Sbjct: 529 aacgcgtc 536
>dbj|AB118014.1| Oryza sativa (japonica cultivar-group) bip127 mRNA for BRI1-KD interacting protein 127, partial cds Length = 1372 Score = 268 bits (135), Expect = 7e-68 Identities = 240/275 (87%) Strand = Plus / Plus Query: 646 aggctagaaaatatcatactggaggccgtgaagaccttgaatgaacctacagggtcatac 705 |||||||| ||||||||| | ||||| || | || ||||||||| ||||||||||||||| Sbjct: 347 aggctagacaatatcatagtagaggcagtaaggagcttgaatgagcctacagggtcatac 406 Query: 706 aaaacagccgttgctaattacatagaggaacaatactggccacctgctgattttgatcat 765 || |||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 407 aagacagccatagctaattacatagaggagcaatactggcctcctgctgattttgatcat 466 Query: 766 gtactgtctgcaaaactgaatgagttgacatcatctggcaaattgatgaaggtgaatcgg 825 || |||||| ||||||||||||| ||||| ||||||| |||||||| ||||||||||| Sbjct: 467 gtcctgtcttcaaaactgaatgatctgacagcatctgggaaattgataaaggtgaatcga 526 Query: 826 aagtacaggatagcccctagctcgtcttttctagaaggacgaagctccaaaatggtgctg 885 |||||||||||||||||||| || ||||| |||||| |||||||||||| | |||||| Sbjct: 527 aagtacaggatagcccctagttcatctttgtcagaagggcgaagctccaaagtagtgctg 586 Query: 886 cttgatgatataaaaaaggagccaaccaaggtaga 920 || || ||||||||||| || ||||| ||| |||| Sbjct: 587 ctcgaagatataaaaaaagaaccaacaaagttaga 621 Score = 222 bits (112), Expect = 3e-54 Identities = 233/272 (85%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 967 gatgctgaacttgcacggatgagaaacatgagcgcagaagaggctgcagctgcagccgct 1026 ||||||||| | || |||||||||| ||||| |||||||||||||| ||||| || ||| Sbjct: 659 gatgctgaattagctcggatgagaaccatgactgcagaagaggctgctgctgctgctgct 718 Query: 1027 cgtgcggttgctgaggcggacgctatcatggcggaagctgaagccgcagtgagagaagcg 1086 ||||| ||||| ||||| || ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 719 cgtgcagttgcagaggcagaagctatcatggctgaagccgaagctgcagtaagagaagca 778 Query: 1087 gaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagcaatgttgacc 1146 ||||||||||||||||||||||||||||||||||| || ||||| ||||||||| || Sbjct: 779 gaggctgcagaagctgatgctgtagctgcacaagctttcgcggaggcagcaatggcaaca 838 Query: 1147 ttaaaaaacaggagttcagcaaaactgatcattcgaggttgagacatcttgtgggagctg 1206 || |||||||| |||||||||||| |||||||||||| |||| | | ||||||||||| Sbjct: 839 tttaaaaacagaagttcagcaaaattgatcattcgagcttgaagctacctgtgggagctg 898 Query: 1207 cttcagcatccgctttcctctgaccttgttgt 1238 | ||||||| | ||||||| ||||||||||| Sbjct: 899 gtgcagcatcag-tttcctccgaccttgttgt 929 Score = 194 bits (98), Expect = 8e-46 Identities = 155/174 (89%) Strand = Plus / Plus Query: 279 gcagaagtggacggcggaggaggaggcggcgctcaaggccgggataggcaagcacggggc 338 |||||| ||||| |||||||||||| | || |||||||||||||| | ||||||||||| Sbjct: 1 gcagaaatggaccgcggaggaggagtccgccctcaaggccgggatcgcaaagcacggggc 60 Query: 339 cgggaaatggcgcaccatactcaaggaccccgagttcagcaacatcctgcgctaccgctc 398 ||||||||||||||||||||||| ||||| || ||||||||| |||||||||||||||| Sbjct: 61 tgggaaatggcgcaccatactcaaagacccagacttcagcaacgtcctgcgctaccgctc 120 Query: 399 caacgttgacctcaaggacaagtggaggaacatgaatgtcacagtgaacgcgtc 452 ||| ||||||||||||||||| ||| |||||||||| || || ||||||||||| Sbjct: 121 caatgttgacctcaaggacaaatggcggaacatgaacgtaaccgtgaacgcgtc 174
>dbj|AK105660.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-G11, full insert sequence Length = 1773 Score = 268 bits (135), Expect = 7e-68 Identities = 240/275 (87%) Strand = Plus / Plus Query: 646 aggctagaaaatatcatactggaggccgtgaagaccttgaatgaacctacagggtcatac 705 |||||||| ||||||||| | ||||| || | || ||||||||| ||||||||||||||| Sbjct: 710 aggctagacaatatcatagtagaggcagtaaggagcttgaatgagcctacagggtcatac 769 Query: 706 aaaacagccgttgctaattacatagaggaacaatactggccacctgctgattttgatcat 765 || |||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 770 aagacagccatagctaattacatagaggagcaatactggcctcctgctgattttgatcat 829 Query: 766 gtactgtctgcaaaactgaatgagttgacatcatctggcaaattgatgaaggtgaatcgg 825 || |||||| ||||||||||||| ||||| ||||||| |||||||| ||||||||||| Sbjct: 830 gtcctgtcttcaaaactgaatgatctgacagcatctgggaaattgataaaggtgaatcga 889 Query: 826 aagtacaggatagcccctagctcgtcttttctagaaggacgaagctccaaaatggtgctg 885 |||||||||||||||||||| || ||||| |||||| |||||||||||| | |||||| Sbjct: 890 aagtacaggatagcccctagttcatctttgtcagaagggcgaagctccaaagtagtgctg 949 Query: 886 cttgatgatataaaaaaggagccaaccaaggtaga 920 || || ||||||||||| || ||||| ||| |||| Sbjct: 950 ctcgaagatataaaaaaagaaccaacaaagttaga 984 Score = 206 bits (104), Expect = 2e-49 Identities = 167/188 (88%) Strand = Plus / Plus Query: 265 atgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgggata 324 ||||| || ||||||||||| ||||| |||||||||||| | || |||||||||||||| Sbjct: 350 atgggtgccccgaagcagaaatggaccgcggaggaggagtccgccctcaaggccgggatc 409 Query: 325 ggcaagcacggggccgggaaatggcgcaccatactcaaggaccccgagttcagcaacatc 384 | ||||||||||| ||||||||||||||||||||||| ||||| || ||||||||| || Sbjct: 410 gcaaagcacggggctgggaaatggcgcaccatactcaaagacccagacttcagcaacgtc 469 Query: 385 ctgcgctaccgctccaacgttgacctcaaggacaagtggaggaacatgaatgtcacagtg 444 ||||||||||||||||| ||||||||||||||||| ||| |||||||||| || || ||| Sbjct: 470 ctgcgctaccgctccaatgttgacctcaaggacaaatggcggaacatgaacgtaaccgtg 529 Query: 445 aacgcgtc 452 |||||||| Sbjct: 530 aacgcgtc 537 Score = 206 bits (104), Expect = 2e-49 Identities = 231/272 (84%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 967 gatgctgaacttgcacggatgagaaacatgagcgcagaagaggctgcagctgcagccgct 1026 ||||||||| | || |||||||||| ||||| |||||||||||||| ||||| || ||| Sbjct: 1022 gatgctgaattagctcggatgagaaccatgactgcagaagaggctgctgctgctgctgct 1081 Query: 1027 cgtgcggttgctgaggcggacgctatcatggcggaagctgaagccgcagtgagagaagcg 1086 ||||| ||||| ||||| || ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 1082 cgtgcagttgcagaggcagaagctatcatggctgaagccgaagctgcagtaagagaagca 1141 Query: 1087 gaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagcaatgttgacc 1146 |||||||||||||||||||| |||||||||||||| || ||||| ||||||||| || Sbjct: 1142 gaggctgcagaagctgatgccgtagctgcacaagctttcgcggaggcagcaatggcaaca 1201 Query: 1147 ttaaaaaacaggagttcagcaaaactgatcattcgaggttgagacatcttgtgggagctg 1206 || || ||||| |||||||||||| |||||||||||| |||| | | ||||||||||| Sbjct: 1202 tttaacaacagaagttcagcaaaattgatcattcgagcttgaagctacctgtgggagctg 1261 Query: 1207 cttcagcatccgctttcctctgaccttgttgt 1238 | ||||||| | ||||||| ||||||||||| Sbjct: 1262 gtgcagcatcag-tttcctccgaccttgttgt 1292
>dbj|AK100618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108E10, full insert sequence Length = 1673 Score = 268 bits (135), Expect = 7e-68 Identities = 240/275 (87%) Strand = Plus / Plus Query: 646 aggctagaaaatatcatactggaggccgtgaagaccttgaatgaacctacagggtcatac 705 |||||||| ||||||||| | ||||| || | || ||||||||| ||||||||||||||| Sbjct: 710 aggctagacaatatcatagtagaggcagtaaggagcttgaatgagcctacagggtcatac 769 Query: 706 aaaacagccgttgctaattacatagaggaacaatactggccacctgctgattttgatcat 765 || |||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 770 aagacagccatagctaattacatagaggagcaatactggcctcctgctgattttgatcat 829 Query: 766 gtactgtctgcaaaactgaatgagttgacatcatctggcaaattgatgaaggtgaatcgg 825 || |||||| ||||||||||||| ||||| ||||||| |||||||| ||||||||||| Sbjct: 830 gtcctgtcttcaaaactgaatgatctgacagcatctgggaaattgataaaggtgaatcga 889 Query: 826 aagtacaggatagcccctagctcgtcttttctagaaggacgaagctccaaaatggtgctg 885 |||||||||||||||||||| || ||||| |||||| |||||||||||| | |||||| Sbjct: 890 aagtacaggatagcccctagttcatctttgtcagaagggcgaagctccaaagtagtgctg 949 Query: 886 cttgatgatataaaaaaggagccaaccaaggtaga 920 || || ||||||||||| || ||||| ||| |||| Sbjct: 950 ctcgaagatataaaaaaagaaccaacaaagttaga 984 Score = 210 bits (106), Expect = 1e-50 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 967 gatgctgaacttgcacggatgagaaacatgagcgcagaagaggctgcagctgcagccgct 1026 ||||||||| | || |||||||||| ||||| |||||||||||||| ||||| || ||| Sbjct: 1022 gatgctgaattagctcggatgagaaccatgactgcagaagaggctgctgctgctgctgct 1081 Query: 1027 cgtgcggttgctgaggcggacgctatcatggcggaagctgaagccgcagtgagagaagcg 1086 ||||| ||||| ||||| || ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 1082 cgtgcagttgcagaggcagaagctatcatggctgaagccgaagctgcagtaagagaagca 1141 Query: 1087 gaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagcaatgttgacc 1146 ||||||||||||||||||||||||||||| ||||| || ||||| ||||||||| || Sbjct: 1142 gaggctgcagaagctgatgctgtagctgcgcaagctttcgcggaggcagcaatggcaaca 1201 Query: 1147 ttaaaaaacaggagttcagcaaaactgatcattcgaggttgagacatcttgtgggagctg 1206 || |||||||| |||||||||||| |||||||||||| |||| | | ||||||||||| Sbjct: 1202 tttaaaaacagaagttcagcaaaattgatcattcgagcttgaagctacctgtgggagctg 1261 Query: 1207 cttcagcatccgctttcctctgaccttgtt 1236 | ||||||| | ||||||| ||||||||| Sbjct: 1262 gtgcagcatcag-tttcctccgaccttgtt 1290 Score = 206 bits (104), Expect = 2e-49 Identities = 167/188 (88%) Strand = Plus / Plus Query: 265 atgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgggata 324 ||||| || ||||||||||| ||||| |||||||||||| | || |||||||||||||| Sbjct: 350 atgggtgccccgaagcagaaatggaccgcggaggaggagtccgccctcaaggccgggatc 409 Query: 325 ggcaagcacggggccgggaaatggcgcaccatactcaaggaccccgagttcagcaacatc 384 | ||||||||||| ||||||||||||||||||||||| ||||| || ||||||||| || Sbjct: 410 gcaaagcacggggctgggaaatggcgcaccatactcaaagacccagacttcagcaacgtc 469 Query: 385 ctgcgctaccgctccaacgttgacctcaaggacaagtggaggaacatgaatgtcacagtg 444 ||||||||||||||||| ||||||||||||||||| ||| |||||||||| || || ||| Sbjct: 470 ctgcgctaccgctccaatgttgacctcaaggacaaatggcggaacatgaacgtaaccgtg 529 Query: 445 aacgcgtc 452 |||||||| Sbjct: 530 aacgcgtc 537
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 190 bits (96), Expect = 1e-44 Identities = 177/204 (86%) Strand = Plus / Minus Query: 967 gatgctgaacttgcacggatgagaaacatgagcgcagaagaggctgcagctgcagccgct 1026 ||||||||| | || |||||||||| ||||| |||||||||||||| ||||| || ||| Sbjct: 26019156 gatgctgaattagctcggatgagaaccatgactgcagaagaggctgctgctgctgctgct 26019097 Query: 1027 cgtgcggttgctgaggcggacgctatcatggcggaagctgaagccgcagtgagagaagcg 1086 ||||| ||||| ||||| || ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 26019096 cgtgcagttgcagaggcagaagctatcatggctgaagccgaagctgcagtaagagaagca 26019037 Query: 1087 gaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagcaatgttgacc 1146 ||||||||||||||||||||||||||||||||||| || ||||| ||||||||| || Sbjct: 26019036 gaggctgcagaagctgatgctgtagctgcacaagctttcgcggaggcagcaatggcaaca 26018977 Query: 1147 ttaaaaaacaggagttcagcaaaa 1170 || |||||||| |||||||||||| Sbjct: 26018976 tttaaaaacagaagttcagcaaaa 26018953 Score = 172 bits (87), Expect = 3e-39 Identities = 135/151 (89%) Strand = Plus / Minus Query: 265 atgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgggata 324 ||||| || ||||||||||| ||||| |||||||||||| | || |||||||||||||| Sbjct: 26021030 atgggtgccccgaagcagaaatggaccgcggaggaggagtccgccctcaaggccgggatc 26020971 Query: 325 ggcaagcacggggccgggaaatggcgcaccatactcaaggaccccgagttcagcaacatc 384 | ||||||||||| ||||||||||||||||||||||| ||||| || ||||||||| || Sbjct: 26020970 gcaaagcacggggctgggaaatggcgcaccatactcaaagacccagacttcagcaacgtc 26020911 Query: 385 ctgcgctaccgctccaacgttgacctcaagg 415 ||||||||||||||||| ||||||||||||| Sbjct: 26020910 ctgcgctaccgctccaatgttgacctcaagg 26020880 Score = 103 bits (52), Expect = 2e-18 Identities = 79/88 (89%) Strand = Plus / Minus Query: 731 aggaacaatactggccacctgctgattttgatcatgtactgtctgcaaaactgaatgagt 790 |||| ||||||||||| |||||||||||||||||||| |||||| ||||||||||||| Sbjct: 26020009 aggagcaatactggcctcctgctgattttgatcatgtcctgtcttcaaaactgaatgatc 26019950 Query: 791 tgacatcatctggcaaattgatgaaggt 818 ||||| ||||||| |||||||| ||||| Sbjct: 26019949 tgacagcatctgggaaattgataaaggt 26019922 Score = 91.7 bits (46), Expect = 8e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 815 aggtgaatcggaagtacaggatagcccctagctcgtcttttctagaaggacgaagctcca 874 |||||||||| |||||||||||||||||||| || ||||| |||||| |||||||||| Sbjct: 26019299 aggtgaatcgaaagtacaggatagcccctagttcatctttgtcagaagggcgaagctcca 26019240 Query: 875 aaatggtgctgcttgatgatataaaaaaggagccaaccaaggtaga 920 || | |||||||| || ||||||||||| || ||||| ||| |||| Sbjct: 26019239 aagtagtgctgctcgaagatataaaaaaagaaccaacaaagttaga 26019194 Score = 89.7 bits (45), Expect = 3e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 645 caggctagaaaatatcatactggaggccgtgaagaccttgaatgaacctacagggtcata 704 ||||||||| ||||||||| | ||||| || | || ||||||||| |||||||||||||| Sbjct: 26020470 caggctagacaatatcatagtagaggcagtaaggagcttgaatgagcctacagggtcata 26020411 Query: 705 caaaacagccgttgctaattacatagagg 733 ||| |||||| | |||||||||||||||| Sbjct: 26020410 caagacagccatagctaattacatagagg 26020382 Score = 42.1 bits (21), Expect = 7.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 468 ggtgcggacgacggcgacgacgacgcccacggc 500 |||||||||||| |||||||||| ||| ||||| Sbjct: 5214035 ggtgcggacgacagcgacgacgaggccgacggc 5214003 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcccacg 498 ||||||| ||||||||||||||||| Sbjct: 23994540 gacgacgacgacgacgacgcccacg 23994564 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 25058950 gacgacggcgacgacgacgcc 25058970
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 190 bits (96), Expect = 1e-44 Identities = 177/204 (86%) Strand = Plus / Plus Query: 967 gatgctgaacttgcacggatgagaaacatgagcgcagaagaggctgcagctgcagccgct 1026 ||||||||| | || |||||||||| ||||| |||||||||||||| ||||| || ||| Sbjct: 92515 gatgctgaattagctcggatgagaaccatgactgcagaagaggctgctgctgctgctgct 92574 Query: 1027 cgtgcggttgctgaggcggacgctatcatggcggaagctgaagccgcagtgagagaagcg 1086 ||||| ||||| ||||| || ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 92575 cgtgcagttgcagaggcagaagctatcatggctgaagccgaagctgcagtaagagaagca 92634 Query: 1087 gaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagcaatgttgacc 1146 ||||||||||||||||||||||||||||||||||| || ||||| ||||||||| || Sbjct: 92635 gaggctgcagaagctgatgctgtagctgcacaagctttcgcggaggcagcaatggcaaca 92694 Query: 1147 ttaaaaaacaggagttcagcaaaa 1170 || |||||||| |||||||||||| Sbjct: 92695 tttaaaaacagaagttcagcaaaa 92718 Score = 172 bits (87), Expect = 3e-39 Identities = 135/151 (89%) Strand = Plus / Plus Query: 265 atgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgggata 324 ||||| || ||||||||||| ||||| |||||||||||| | || |||||||||||||| Sbjct: 90641 atgggtgccccgaagcagaaatggaccgcggaggaggagtccgccctcaaggccgggatc 90700 Query: 325 ggcaagcacggggccgggaaatggcgcaccatactcaaggaccccgagttcagcaacatc 384 | ||||||||||| ||||||||||||||||||||||| ||||| || ||||||||| || Sbjct: 90701 gcaaagcacggggctgggaaatggcgcaccatactcaaagacccagacttcagcaacgtc 90760 Query: 385 ctgcgctaccgctccaacgttgacctcaagg 415 ||||||||||||||||| ||||||||||||| Sbjct: 90761 ctgcgctaccgctccaatgttgacctcaagg 90791 Score = 103 bits (52), Expect = 2e-18 Identities = 79/88 (89%) Strand = Plus / Plus Query: 731 aggaacaatactggccacctgctgattttgatcatgtactgtctgcaaaactgaatgagt 790 |||| ||||||||||| |||||||||||||||||||| |||||| ||||||||||||| Sbjct: 91662 aggagcaatactggcctcctgctgattttgatcatgtcctgtcttcaaaactgaatgatc 91721 Query: 791 tgacatcatctggcaaattgatgaaggt 818 ||||| ||||||| |||||||| ||||| Sbjct: 91722 tgacagcatctgggaaattgataaaggt 91749 Score = 91.7 bits (46), Expect = 8e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 815 aggtgaatcggaagtacaggatagcccctagctcgtcttttctagaaggacgaagctcca 874 |||||||||| |||||||||||||||||||| || ||||| |||||| |||||||||| Sbjct: 92372 aggtgaatcgaaagtacaggatagcccctagttcatctttgtcagaagggcgaagctcca 92431 Query: 875 aaatggtgctgcttgatgatataaaaaaggagccaaccaaggtaga 920 || | |||||||| || ||||||||||| || ||||| ||| |||| Sbjct: 92432 aagtagtgctgctcgaagatataaaaaaagaaccaacaaagttaga 92477 Score = 89.7 bits (45), Expect = 3e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 645 caggctagaaaatatcatactggaggccgtgaagaccttgaatgaacctacagggtcata 704 ||||||||| ||||||||| | ||||| || | || ||||||||| |||||||||||||| Sbjct: 91201 caggctagacaatatcatagtagaggcagtaaggagcttgaatgagcctacagggtcata 91260 Query: 705 caaaacagccgttgctaattacatagagg 733 ||| |||||| | |||||||||||||||| Sbjct: 91261 caagacagccatagctaattacatagagg 91289
>gb|DQ245014.1| Zea mays clone 12204 mRNA sequence Length = 1260 Score = 119 bits (60), Expect = 4e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 646 aggctagaaaatatcatactggaggccgtgaagaccttgaatgaacctacagggtcatac 705 |||||||| ||||| ||| ||||||| | |||| ||||||||| ||||||||||| || Sbjct: 639 aggctagacaatattataatggaggctataaagaacttgaatgagcctacagggtcccac 698 Query: 706 aaaacagccgttgctaattacatagaggaacaatactggccacctgctgattttgatcat 765 | ||| | ||||||||||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 699 agaactactattgctaattacatagaggagcaatattggccacctagtgattttgatcac 758 Query: 766 gtactgtctgcaaaactgaatgagttgacatcatctggcaaattgatgaaggtgaatcgg 825 || |||||||||||||||| | || | | ||| |||||| |||||||||||||| Sbjct: 759 ttattgtctgcaaaactgaagtatttagctaccagtgggaaattgttgaaggtgaatcgg 818 Query: 826 aagtacaggatagcccctag 845 |||||||||||||| ||||| Sbjct: 819 aagtacaggatagcacctag 838 Score = 56.0 bits (28), Expect = 5e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 386 tgcgctaccgctccaacgttgacctcaaggacaagtggaggaacatgaatgt 437 ||||||||||||| || |||||||| |||||||| ||| | ||||||||||| Sbjct: 388 tgcgctaccgctcgaatgttgacctaaaggacaaatggcgcaacatgaatgt 439 Score = 52.0 bits (26), Expect = 0.007 Identities = 92/114 (80%) Strand = Plus / Plus Query: 1024 gctcgtgcggttgctgaggcggacgctatcatggcggaagctgaagccgcagtgagagaa 1083 |||| ||| ||||| ||||| || ||||||||||| ||||||||||| || | || ||| Sbjct: 972 gctcatgcagttgcagaggcagaggctatcatggcagaagctgaagcagctgctagggaa 1031 Query: 1084 gcggaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagca 1137 || || ||||| ||||| || || ||| ||||| |||||||| ||||||||| Sbjct: 1032 gcagaagctgcggaagcagaggcccgagcagcacaggcctttgctgaagcagca 1085
>gb|AY280630.1| Zea mays single myb histone 5 (Smh5) mRNA, complete cds Length = 1159 Score = 119 bits (60), Expect = 4e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 646 aggctagaaaatatcatactggaggccgtgaagaccttgaatgaacctacagggtcatac 705 |||||||| ||||| ||| ||||||| | |||| ||||||||| ||||||||||| || Sbjct: 533 aggctagacaatattataatggaggctataaagaacttgaatgagcctacagggtcccac 592 Query: 706 aaaacagccgttgctaattacatagaggaacaatactggccacctgctgattttgatcat 765 | ||| | ||||||||||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 593 agaactactattgctaattacatagaggagcaatattggccacctagtgattttgatcac 652 Query: 766 gtactgtctgcaaaactgaatgagttgacatcatctggcaaattgatgaaggtgaatcgg 825 || |||||||||||||||| | || | | ||| |||||| |||||||||||||| Sbjct: 653 ttattgtctgcaaaactgaagtatttagctaccagtgggaaattgttgaaggtgaatcgg 712 Query: 826 aagtacaggatagcccctag 845 |||||||||||||| ||||| Sbjct: 713 aagtacaggatagcacctag 732 Score = 60.0 bits (30), Expect = 3e-05 Identities = 93/114 (81%) Strand = Plus / Plus Query: 1024 gctcgtgcggttgctgaggcggacgctatcatggcggaagctgaagccgcagtgagagaa 1083 |||| ||| ||||| ||||| || ||||||||||| ||||||||||| || | || ||| Sbjct: 866 gctcatgcagttgcagaggcagaggctatcatggcagaagctgaagcagctgctagggaa 925 Query: 1084 gcggaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagca 1137 || || ||||| ||||| || || ||||||||| |||||||| ||||||||| Sbjct: 926 gcagaagctgcggaagcagaggcccgagctgcacaggcctttgctgaagcagca 979 Score = 56.0 bits (28), Expect = 5e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 386 tgcgctaccgctccaacgttgacctcaaggacaagtggaggaacatgaatgt 437 ||||||||||||| || |||||||| |||||||| ||| | ||||||||||| Sbjct: 282 tgcgctaccgctcgaatgttgacctaaaggacaaatggcgcaacatgaatgt 333
>gb|AY280632.1| Zea mays single myb histone 6 (Smh6) mRNA, complete cds Length = 1677 Score = 113 bits (57), Expect = 2e-21 Identities = 165/201 (82%) Strand = Plus / Plus Query: 645 caggctagaaaatatcatactggaggccgtgaagaccttgaatgaacctacagggtcata 704 ||||||||| ||||| ||| ||||||| | |||| ||| ||||| ||||| || ||| | Sbjct: 774 caggctagataatattataatggaggctataaagaacttaaatgagcctacgggatcaca 833 Query: 705 caaaacagccgttgctaattacatagaggaacaatactggccacctgctgattttgatca 764 || ||| | ||||||||||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 834 cagaactactattgctaattacatagaggagcaatattggccacctagtgattttgatca 893 Query: 765 tgtactgtctgcaaaactgaatgagttgacatcatctggcaaattgatgaaggtgaatcg 824 |||| |||||||||||||| || ||| | | |||||||||||| |||||||| || Sbjct: 894 cttactatctgcaaaactgaaggacttgtccaccagtggcaaattgataaaggtgaaccg 953 Query: 825 gaagtacaggatagcccctag 845 ||||||||| ||||| ||||| Sbjct: 954 gaagtacagaatagcacctag 974 Score = 69.9 bits (35), Expect = 3e-08 Identities = 98/119 (82%) Strand = Plus / Plus Query: 1018 gcagccgctcgtgcggttgctgaggcggacgctatcatggcggaagctgaagccgcagtg 1077 ||||| ||||| || |||||||| || || || |||||||| ||||||||||| |||| | Sbjct: 1138 gcagcggctcgagcagttgctgaagcagaggccatcatggcagaagctgaagctgcagcg 1197 Query: 1078 agagaagcggaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagc 1136 | ||| || |||||||||||||| || || ||| |||||||| ||||| |||||||| Sbjct: 1198 aaagaggcagaggctgcagaagcagaagcccaagccgcacaagcatttgctgaagcagc 1256 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 389 gctaccgctccaacgttgacctcaaggacaagtggaggaacatgaatgt 437 |||||||||| || ||||| ||||||||||||||| | ||||||||||| Sbjct: 530 gctaccgctcaaatgttgatctcaaggacaagtggcgaaacatgaatgt 578
>gb|AY271659.1| Zea mays single myb histone 1 (Smh1) mRNA, complete cds Length = 1212 Score = 97.6 bits (49), Expect = 1e-16 Identities = 145/177 (81%) Strand = Plus / Plus Query: 264 gatgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgggat 323 ||||||||| ||||||||| |||||| ||||||| ||||| || ||||||||||| | Sbjct: 91 gatgggggcgccgaagcagcgctggacgccggaggaagaggccgctctcaaggccggcgt 150 Query: 324 aggcaagcacggggccgggaaatggcgcaccatactcaaggaccccgagttcagcaacat 383 | |||||||||| |||| || ||||||||||| ||| |||| | || |||||| | Sbjct: 151 cgccaagcacgggcccggcaagtggcgcaccatcctccgggactcggacttcagcgcgct 210 Query: 384 cctgcgctaccgctccaacgttgacctcaaggacaagtggaggaacatgaatgtcac 440 ||||||| ||||||||| ||||||||||||||||||||| | ||| ||| |||||| Sbjct: 211 cctgcgcctccgctccaatgttgacctcaaggacaagtggcgcaacttgagtgtcac 267 Score = 56.0 bits (28), Expect = 5e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 724 tacatagaggaacaatactggccacctgctgatttt 759 ||||| ||||| |||||||||||||||||||||||| Sbjct: 548 tacattgaggaccaatactggccacctgctgatttt 583
>emb|CT830863.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110E03, full insert sequence Length = 1459 Score = 91.7 bits (46), Expect = 8e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 263 agatgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgg 320 |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 313 agatgggggcgccgaagcagaggtggacggcggaggaggaggccgcgctcaaggccgg 370
>ref|NM_001049977.1| Oryza sativa (japonica cultivar-group) Os01g0589300 (Os01g0589300) mRNA, complete cds Length = 1717 Score = 91.7 bits (46), Expect = 8e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 263 agatgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgg 320 |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 331 agatgggggcgccgaagcagaggtggacggcggaggaggaggccgcgctcaaggccgg 388
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 91.7 bits (46), Expect = 8e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 263 agatgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgg 320 |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 22984670 agatgggggcgccgaagcagaggtggacggcggaggaggaggccgcgctcaaggccgg 22984727 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 263 agatgggggcaccgaagcagaagtggacggcggaggaggaggcggcgct 311 ||||||| || ||||||||||||||||| |||||||||||| |||||| Sbjct: 29398978 agatgggcgccccgaagcagaagtggacctcggaggaggaggaggcgct 29399026 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 cggacgacggcgacgacgacg 492 ||||||||||||||||||||| Sbjct: 27849335 cggacgacggcgacgacgacg 27849315
>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 91.7 bits (46), Expect = 8e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 263 agatgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgg 320 |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 55076 agatgggggcgccgaagcagaggtggacggcggaggaggaggccgcgctcaaggccgg 55133
>dbj|AK103040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117F01, full insert sequence Length = 1718 Score = 91.7 bits (46), Expect = 8e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 263 agatgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgg 320 |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 332 agatgggggcgccgaagcagaggtggacggcggaggaggaggccgcgctcaaggccgg 389
>gb|AF461815.1| Zea mays histone H1-like protein (hon108) mRNA, complete cds Length = 1003 Score = 79.8 bits (40), Expect = 3e-11 Identities = 133/164 (81%) Strand = Plus / Plus Query: 265 atgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgggata 324 ||||| || ||||||||||| |||||| |||| ||||||| |||||| ||||| | Sbjct: 22 atgggcgcgccgaagcagaaatggacgtcggaagaggaggatgcgctccgcgccggcgtg 81 Query: 325 ggcaagcacggggccgggaaatggcgcaccatactcaaggaccccgagttcagcaacatc 384 |||||||||| ||||| |||||||| ||||| | |||||||||||||||||| || Sbjct: 82 cgcaagcacggcgccggcaaatggcggaccatccagaaggaccccgagttcagcccggtc 141 Query: 385 ctgcgctaccgctccaacgttgacctcaaggacaagtggaggaa 428 || || |||||||||| | |||||||||||||| |||||||| Sbjct: 142 ctctcctcccgctccaacatcgacctcaaggacaaatggaggaa 185
>gb|AY280631.1| Zea mays Single myb histone 4 (Smh4) mRNA, complete cds Length = 1426 Score = 79.8 bits (40), Expect = 3e-11 Identities = 133/164 (81%) Strand = Plus / Plus Query: 265 atgggggcaccgaagcagaagtggacggcggaggaggaggcggcgctcaaggccgggata 324 ||||| || ||||||||||| |||||| |||| ||||||| |||||| ||||| | Sbjct: 97 atgggcgcgccgaagcagaaatggacgtcggaagaggaggatgcgctccgcgccggcgtg 156 Query: 325 ggcaagcacggggccgggaaatggcgcaccatactcaaggaccccgagttcagcaacatc 384 |||||||||| ||||| |||||||| ||||| | |||||||||||||||||| || Sbjct: 157 cgcaagcacggcgccggcaaatggcggaccatccagaaggaccccgagttcagcccggtc 216 Query: 385 ctgcgctaccgctccaacgttgacctcaaggacaagtggaggaa 428 || || |||||||||| | |||||||||||||| |||||||| Sbjct: 217 ctctcctcccgctccaacatcgacctcaaggacaaatggaggaa 260
>gb|AY280629.1| Zea mays single myb histone 3 (Smh3) mRNA, complete cds Length = 1301 Score = 61.9 bits (31), Expect = 8e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 326 gcaagcacggggccgggaaatggcgcaccatactcaaggaccccgagttcagcaacatcc 385 |||||||||| ||||| |||||||| ||||| | ||||||||| |||||||| |||| Sbjct: 187 gcaagcacggcgccggcaaatggcggaccatccagaaggacccccagttcagcccgatcc 246 Query: 386 tgcgctaccgctccaacgttgacctcaaggacaagtggaggaa 428 | || ||||||||| | |||||||||||||| |||||||| Sbjct: 247 tctcctcccgctccaatatcgacctcaaggacaaatggaggaa 289 Score = 48.1 bits (24), Expect = 0.11 Identities = 36/40 (90%) Strand = Plus / Plus Query: 265 atgggggcaccgaagcagaagtggacggcggaggaggagg 304 ||||| || |||||||||||||||||| |||| ||||||| Sbjct: 126 atgggcgcgccgaagcagaagtggacgtcggaagaggagg 165
>gb|AY105554.1| Zea mays PCO086590 mRNA sequence Length = 522 Score = 60.0 bits (30), Expect = 3e-05 Identities = 93/114 (81%) Strand = Plus / Plus Query: 1024 gctcgtgcggttgctgaggcggacgctatcatggcggaagctgaagccgcagtgagagaa 1083 |||| ||| ||||| ||||| || ||||||||||| ||||||||||| || | || ||| Sbjct: 214 gctcatgcagttgcagaggcagaggctatcatggcagaagctgaagcagctgctagggaa 273 Query: 1084 gcggaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagca 1137 || || ||||| ||||| || || ||||||||| |||||||| ||||||||| Sbjct: 274 gcagaagctgcggaagcagaggcccgagctgcacaggcctttgctgaagcagca 327 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 815 aggtgaatcggaagtacaggatagcccctag 845 ||||||||||||||||||||||||| ||||| Sbjct: 50 aggtgaatcggaagtacaggatagcacctag 80
>ref|NM_001050558.1| Oryza sativa (japonica cultivar-group) Os01g0708000 (Os01g0708000) mRNA, complete cds Length = 1201 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 263 agatgggggcaccgaagcagaagtggacggcggaggaggaggcggcgct 311 ||||||| || ||||||||||||||||| |||||||||||| |||||| Sbjct: 99 agatgggcgccccgaagcagaagtggacctcggaggaggaggaggcgct 147
>emb|AJ495797.1|OSA495797 Oryza sativa (japonica cultivar-group) mRNA for MYB28 protein Length = 1219 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 263 agatgggggcaccgaagcagaagtggacggcggaggaggaggcggcgct 311 ||||||| || ||||||||||||||||| |||||||||||| |||||| Sbjct: 99 agatgggcgccccgaagcagaagtggacctcggaggaggaggaggcgct 147
>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F09 Length = 138277 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 263 agatgggggcaccgaagcagaagtggacggcggaggaggaggcggcgct 311 ||||||| || ||||||||||||||||| |||||||||||| |||||| Sbjct: 94040 agatgggcgccccgaagcagaagtggacctcggaggaggaggaggcgct 94088
>gb|AY110547.1| Zea mays CL35804_1 mRNA sequence Length = 956 Score = 56.0 bits (28), Expect = 5e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 724 tacatagaggaacaatactggccacctgctgatttt 759 ||||| ||||| |||||||||||||||||||||||| Sbjct: 863 tacattgaggaccaatactggccacctgctgatttt 828
>gb|AY105156.1| Zea mays PCO086591 mRNA sequence Length = 540 Score = 56.0 bits (28), Expect = 5e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 386 tgcgctaccgctccaacgttgacctcaaggacaagtggaggaacatgaatgt 437 ||||||||||||| || |||||||| |||||||| ||| | ||||||||||| Sbjct: 354 tgcgctaccgctcgaatgttgacctaaaggacaaatggcgcaacatgaatgt 405
>gb|DQ074477.1| Malus x domestica MYBR6 mRNA, complete cds Length = 1746 Score = 50.1 bits (25), Expect = 0.029 Identities = 49/57 (85%) Strand = Plus / Plus Query: 1084 gcggaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagcaatg 1140 |||||||||||||||||||| || | ||| ||||||| ||||| ||||||||||| Sbjct: 1035 gcggaggctgcagaagctgaagcagaagcagcacaagtttttgccaaagcagcaatg 1091
>gb|DQ822885.1| Glycine max MYB transcription factor MYB55 (MYB55) mRNA, complete cds Length = 1541 Score = 46.1 bits (23), Expect = 0.45 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1081 gaagcggaggctgcagaagctgatgctgtagctgcacaagcctttgc 1127 ||||| ||||| |||||||||||||| | ||||||||||| ||||| Sbjct: 936 gaagcagaggcagcagaagctgatgcggaggctgcacaagcttttgc 982
>gb|AC140720.21| Medicago truncatula clone mth2-17l10, complete sequence Length = 122940 Score = 46.1 bits (23), Expect = 0.45 Identities = 41/47 (87%) Strand = Plus / Minus Query: 331 cacggggccgggaaatggcgcaccatactcaaggaccccgagttcag 377 |||||||| || ||||||||||| ||||| | ||| ||||||||||| Sbjct: 26771 cacggggctggaaaatggcgcacaatacttatggatcccgagttcag 26725
>gb|AC147000.32| Medicago truncatula clone mth2-124a16, complete sequence Length = 113682 Score = 46.1 bits (23), Expect = 0.45 Identities = 41/47 (87%) Strand = Plus / Plus Query: 331 cacggggccgggaaatggcgcaccatactcaaggaccccgagttcag 377 |||||||| || ||||||||||| ||||| | ||| ||||||||||| Sbjct: 42791 cacggggctggaaaatggcgcacaatacttatggatcccgagttcag 42837
>gb|AC136142.12| Medicago truncatula clone mth2-9f9, complete sequence Length = 68984 Score = 46.1 bits (23), Expect = 0.45 Identities = 41/47 (87%) Strand = Plus / Plus Query: 331 cacggggccgggaaatggcgcaccatactcaaggaccccgagttcag 377 |||||||| || ||||||||||| ||||| | ||| ||||||||||| Sbjct: 39376 cacggggctggaaaatggcgcacaatacttatggatcccgagttcag 39422
>gb|AY110181.1| Zea mays CL22088_1 mRNA sequence Length = 944 Score = 46.1 bits (23), Expect = 0.45 Identities = 41/47 (87%) Strand = Plus / Minus Query: 330 gcacggggccgggaaatggcgcaccatactcaaggaccccgagttca 376 |||||| ||||| |||||||| ||||| | |||||||||||||||| Sbjct: 901 gcacggcgccggcaaatggcggaccatccagaaggaccccgagttca 855
>emb|CT025657.12| Mouse DNA sequence from clone RP23-342N19 on chromosome 9, complete sequence Length = 202383 Score = 46.1 bits (23), Expect = 0.45 Identities = 23/23 (100%) Strand = Plus / Minus Query: 8 tcctcctccacctcttctccact 30 ||||||||||||||||||||||| Sbjct: 121509 tcctcctccacctcttctccact 121487
>gb|DQ822899.1| Glycine max MYB transcription factor MYB85 (MYB85) mRNA, complete cds Length = 1493 Score = 44.1 bits (22), Expect = 1.8 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1087 gaggctgcagaagctgatgctgtagctgcacaagcctttgcggaagcagcaatg 1140 ||||||||||||||||| |||| ||||| |||| ||||| ||||||||||| Sbjct: 1030 gaggctgcagaagctgaggctgaggctgctcaagtgtttgcaaaagcagcaatg 1083 Score = 42.1 bits (21), Expect = 7.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 327 caagcacggggccgggaaatggcgcaccatact 359 |||||| ||||| || ||||||||||||||||| Sbjct: 291 caagcatggggcaggaaaatggcgcaccatact 323
>emb|AM111314.1| Plantago major partial mRNA for myb transcription factor (myb1 gene) Length = 1228 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Plus Query: 409 ctcaaggacaagtggaggaacatgaatgtc 438 ||||||||||||||| ||||||||| |||| Sbjct: 52 ctcaaggacaagtggcggaacatgagtgtc 81
>ref|NM_018814.3| Mus musculus pecanex homolog (Drosophila) (Pcnx), mRNA Length = 12139 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 gacggcggaggaggaggcggcg 309 |||||||||||||||||||||| Sbjct: 175 gacggcggaggaggaggcggcg 154
>gb|AC104203.11| Mus musculus chromosome 5, clone RP24-301M6, complete sequence Length = 174779 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 183 gctgctgttgctgttgtcgtta 204 |||||||||||||||||||||| Sbjct: 48963 gctgctgttgctgttgtcgtta 48984
>gb|AC124595.4| Mus musculus BAC clone RP23-18J1 from chromosome 12, complete sequence Length = 210781 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 gacggcggaggaggaggcggcg 309 |||||||||||||||||||||| Sbjct: 49638 gacggcggaggaggaggcggcg 49659
>gb|AC160227.3| Loxodonta africana clone VMRC15-528D5, complete sequence Length = 106354 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 cagatgggggcaccgaagcaga 283 |||||||||||||||||||||| Sbjct: 2035 cagatgggggcaccgaagcaga 2056
>gb|AF305070.2|AF305070 Chlamydomonas reinhardtii DEAH-box RNA helicase (Mut6) mRNA, complete cds Length = 4299 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Plus Query: 290 cggcggaggaggaggcggcgctcaaggccg 319 ||||||||| ||||||||||| |||||||| Sbjct: 2027 cggcggaggcggaggcggcgcgcaaggccg 2056
>dbj|AK121054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055P22, full insert sequence Length = 1972 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 284 agtggacggcggaggaggaggcggcg 309 |||||||||||| ||||||||||||| Sbjct: 455 agtggacggcggcggaggaggcggcg 480
>emb|AL596384.17| Mouse DNA sequence from clone RP23-353J21 on chromosome 11, complete sequence Length = 219695 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1764 ttggttttgtgttggtacttgg 1785 |||||||||||||||||||||| Sbjct: 167945 ttggttttgtgttggtacttgg 167966
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 469 gtgcggacgacggcgacgacgacgc 493 ||||| ||||||||||||||||||| Sbjct: 3116582 gtgcgcacgacggcgacgacgacgc 3116558
>emb|CR855182.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0140O07, complete sequence Length = 78789 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 16860 acggcggaggaggaggcggcg 16840
>ref|XM_001224343.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_05130) mRNA, complete cds Length = 1203 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 ggacggcggaggaggaggcgg 307 ||||||||||||||||||||| Sbjct: 1098 ggacggcggaggaggaggcgg 1118
>dbj|AK241927.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075077I16, full insert sequence Length = 2514 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 283 gacgacggcgacgacgacgcc 303
>dbj|AK241919.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075074E04, full insert sequence Length = 3655 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 1575 acggcggaggaggaggcggcg 1555
>ref|NM_001073714.1| Oryza sativa (japonica cultivar-group) Os12g0595800 (Os12g0595800) mRNA, complete cds Length = 2393 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 1287 gacgacggcgacgacgacgcc 1307
>ref|NM_001073659.1| Oryza sativa (japonica cultivar-group) Os12g0579000 (Os12g0579000) mRNA, complete cds Length = 2377 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcccacg 498 ||||||| ||||||||||||||||| Sbjct: 367 gacgacgacgacgacgacgcccacg 391
>ref|NM_001074962.1| Oryza sativa (japonica cultivar-group) Os11g0671000 (Os11g0671000) mRNA, complete cds Length = 801 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 282 gacgacggcgacgacgacgcc 302
>ref|NM_001074828.1| Oryza sativa (japonica cultivar-group) Os11g0620800 (Os11g0620800) mRNA, complete cds Length = 711 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 58 acggcggaggaggaggcggcg 78
>ref|NM_001063398.1| Oryza sativa (japonica cultivar-group) Os06g0158100 (Os06g0158100) mRNA, complete cds Length = 1176 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 1049 acggcggaggaggaggcggcg 1029
>ref|NM_001059436.1| Oryza sativa (japonica cultivar-group) Os04g0445300 (Os04g0445300) mRNA, complete cds Length = 692 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 115 acggcggaggaggaggcggcg 95
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1012 gcagctgcagccgctcgtgcg 1032 ||||||||||||||||||||| Sbjct: 2348118 gcagctgcagccgctcgtgcg 2348138
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 gctgctgttgctgttgtcgttatcg 207 |||||||||||||||||||| |||| Sbjct: 13882934 gctgctgttgctgttgtcgtcatcg 13882910
>emb|CT827801.6| Pig DNA sequence from clone CH242-209H21 on chromosome 14, complete sequence Length = 205646 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 ggcggaggaggaggcggcgct 311 ||||||||||||||||||||| Sbjct: 4138 ggcggaggaggaggcggcgct 4118
>gb|AC189305.1| Brassica rapa subsp. pekinensis clone KBrB031O20, complete sequence Length = 152775 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 409 ctcaaggacaagtggaggaacatga 433 ||||||||||||||||| ||||||| Sbjct: 86029 ctcaaggacaagtggagaaacatga 86005
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 ggtcgccgtctccgccccact 136 ||||||||||||||||||||| Sbjct: 2304791 ggtcgccgtctccgccccact 2304771
>ref|NM_105937.3| Arabidopsis thaliana unknown protein (AT1G72790) mRNA, complete cds Length = 2053 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 1473 acggcggaggaggaggcggcg 1453
>gb|AC114608.5| Mus musculus chromosome 8, clone RP23-418L5, complete sequence Length = 190200 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1236 tgtgcgtgcgtgcatgcctgctgaa 1260 |||||||||||||||||||| |||| Sbjct: 172355 tgtgcgtgcgtgcatgcctgttgaa 172331
>gb|AC154050.1| Drosophila melanogaster clone BACR22M24, complete sequence Length = 161653 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 gctgctgttgctgttgtcgttatcg 207 |||||||||||||||||||| |||| Sbjct: 27309 gctgctgttgctgttgtcgtcatcg 27285
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 7.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 276 gaagcagaagtggacggcggaggaggagg 304 |||| ||||| |||||||||||||||||| Sbjct: 1661045 gaagaagaagaggacggcggaggaggagg 1661017
>gb|BT018317.1| Zea mays clone EL01T0207F10.c mRNA sequence Length = 1417 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 412 aaggacaagtggaggaacatg 432 ||||||||||||||||||||| Sbjct: 1146 aaggacaagtggaggaacatg 1166
>gb|AY676932.1| Oryza sativa (indica cultivar-group) transcription factor WRKY100 (WRKY100) mRNA, complete cds Length = 1176 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 1049 acggcggaggaggaggcggcg 1029
>gb|AC124475.3| Mus musculus BAC clone RP24-92F8 from chromosome 8, complete sequence Length = 212858 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1236 tgtgcgtgcgtgcatgcctgctgaa 1260 |||||||||||||||||||| |||| Sbjct: 117797 tgtgcgtgcgtgcatgcctgttgaa 117821
>gb|AY510084.1| Vibriophage VP5, complete genome Length = 39786 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ccccacttcgcccccttcgtttccg 154 ||||||||||||||| ||||||||| Sbjct: 39424 ccccacttcgcccccatcgtttccg 39448
>gb|BT000901.1| Arabidopsis thaliana clone C105062 unknown protein (At1g72790) mRNA, complete cds Length = 1717 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 1372 acggcggaggaggaggcggcg 1352
>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0076M06, complete sequence Length = 133581 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 55127 gacgacggcgacgacgacgcc 55107
>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034K24, complete sequence Length = 142852 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 37330 acggcggaggaggaggcggcg 37310
>gb|AY091038.1| Arabidopsis thaliana unknown protein (At1g72790) mRNA, partial cds Length = 1707 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 1473 acggcggaggaggaggcggcg 1453
>gb|AC069523.15| Homo sapiens 3 BAC RP11-1K20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145593 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1236 tgtgcgtgcgtgcatgcctgc 1256 ||||||||||||||||||||| Sbjct: 88486 tgtgcgtgcgtgcatgcctgc 88506
>gb|AY081724.1| Arabidopsis thaliana At1g72790/F28P22_2 mRNA, complete cds Length = 1686 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 1372 acggcggaggaggaggcggcg 1352
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 23349645 acggcggaggaggaggcggcg 23349665 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 26253478 gacgacggcgacgacgacgcc 26253458
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 15717038 gacgacggcgacgacgacgcc 15717018 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 cggcggaggaggaggcggcgc 310 ||||||||||||||||||||| Sbjct: 17607670 cggcggaggaggaggcggcgc 17607690
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 2961871 acggcggaggaggaggcggcg 2961851
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 22180983 acggcggaggaggaggcggcg 22180963
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 cggacgacggcgacgacgacg 492 ||||||||||||||||||||| Sbjct: 13753151 cggacgacggcgacgacgacg 13753171
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 cggacgacggcgacgacgacg 492 ||||||||||||||||||||| Sbjct: 34704 cggacgacggcgacgacgacg 34724
>gb|AY070717.1| Arabidopsis thaliana At1g72790/F28P22_2 mRNA, complete cds Length = 2010 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 1429 acggcggaggaggaggcggcg 1409
>gb|AC021639.5| Drosophila melanogaster, chromosome X, region 12E-12E, BAC clone BACR02C24, complete sequence Length = 234783 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 gctgctgttgctgttgtcgttatcg 207 |||||||||||||||||||| |||| Sbjct: 207730 gctgctgttgctgttgtcgtcatcg 207754
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 3839398 gacgacggcgacgacgacgcc 3839378
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 476 cgacggcgacgacgacgcccacggc 500 |||||||||||| |||||||||||| Sbjct: 2122811 cgacggcgacgaggacgcccacggc 2122835
>gb|AC010926.12|AC010926 Arabidopsis thaliana chromosome 1 BAC F28P22 genomic sequence, complete sequence Length = 101105 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 14298 acggcggaggaggaggcggcg 14318
>gb|AC010705.15|AC010705 Drosophila melanogaster, chromosome X, region 12D-12E, BAC clone BACR28F21, complete sequence Length = 163958 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 gctgctgttgctgttgtcgttatcg 207 |||||||||||||||||||| |||| Sbjct: 161786 gctgctgttgctgttgtcgtcatcg 161762
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 cggacgacggcgacgacgacg 492 ||||||||||||||||||||| Sbjct: 36016 cggacgacggcgacgacgacg 35996
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 122017 acggcggaggaggaggcggcg 121997
>dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0702F05 Length = 145018 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 49820 acggcggaggaggaggcggcg 49800
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0039E17 Length = 144126 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 2224 gacgacggcgacgacgacgcc 2204
>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0016E03 Length = 152934 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 108345 gacgacggcgacgacgacgcc 108325
>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1005_D12 Length = 150588 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 cggcggaggaggaggcggcgc 310 ||||||||||||||||||||| Sbjct: 56392 cggcggaggaggaggcggcgc 56412
>dbj|AK121185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084P22, full insert sequence Length = 2394 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 1288 gacgacggcgacgacgacgcc 1308
>dbj|AK119708.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-E08, full insert sequence Length = 782 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 282 gacgacggcgacgacgacgcc 302
>dbj|AK106536.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-C04, full insert sequence Length = 2377 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcccacg 498 ||||||| ||||||||||||||||| Sbjct: 367 gacgacgacgacgacgacgcccacg 391
>dbj|AK102659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101I15, full insert sequence Length = 2468 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 ggacgacggcgacgacgacgc 493 ||||||||||||||||||||| Sbjct: 527 ggacgacggcgacgacgacgc 507
>dbj|AK101874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070G15, full insert sequence Length = 2408 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 1318 gacgacggcgacgacgacgcc 1338
>dbj|AK099661.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066L14, full insert sequence Length = 2361 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 1271 gacgacggcgacgacgacgcc 1291
>emb|BX816492.1|CNS0ABPQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH51ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1872 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 1405 acggcggaggaggaggcggcg 1385
>dbj|AK072425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098M23, full insert sequence Length = 2497 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 1361 gacgacggcgacgacgacgcc 1381
>dbj|AK063073.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H04, full insert sequence Length = 692 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 115 acggcggaggaggaggcggcg 95
>dbj|AK060981.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-H08, full insert sequence Length = 801 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 282 gacgacggcgacgacgacgcc 302
>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121563 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 72529 gacgacggcgacgacgacgcc 72509
>gb|AY111603.1| Zea mays CL42008_-1 mRNA sequence Length = 600 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 412 aaggacaagtggaggaacatg 432 ||||||||||||||||||||| Sbjct: 111 aaggacaagtggaggaacatg 131
>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence Length = 77605 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 29733 acggcggaggaggaggcggcg 29713
>gb|AY738116.1| Zea mays terminal acidic SANT 1 mRNA, complete cds Length = 1820 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 412 aaggacaagtggaggaacatg 432 ||||||||||||||||||||| Sbjct: 1289 aaggacaagtggaggaacatg 1309
>gb|AY818405.1|AY818403S3 Zea mays terminal acidic SANT 1 (Tacs1) gene, introns 3 and 4 and partial cds Length = 512 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 412 aaggacaagtggaggaacatg 432 ||||||||||||||||||||| Sbjct: 318 aaggacaagtggaggaacatg 338
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 acggcggaggaggaggcggcg 309 ||||||||||||||||||||| Sbjct: 50844 acggcggaggaggaggcggcg 50824
>emb|AL731879.5|CNS08C8K Oryza sativa chromosome 12, . BAC OSJNBb0016I13 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150192 Score = 42.1 bits (21), Expect = 7.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 468 ggtgcggacgacggcgacgacgacgcccacggc 500 |||||||||||| |||||||||| ||| ||||| Sbjct: 8275 ggtgcggacgacagcgacgacgaggccgacggc 8243
>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124959 Score = 42.1 bits (21), Expect = 7.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 ggtgcggacgacggcgacgacgacgcccacggc 500 |||||||||||| |||||||||| ||| ||||| Sbjct: 49564 ggtgcggacgacagcgacgacgaggccgacggc 49596
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 474 gacgacggcgacgacgacgcccacg 498 ||||||| ||||||||||||||||| Sbjct: 92856 gacgacgacgacgacgacgcccacg 92832
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 gacgacggcgacgacgacgcc 494 ||||||||||||||||||||| Sbjct: 48218 gacgacggcgacgacgacgcc 48198
>gb|U20824.1|EHVU20824 Equine herpesvirus 2, complete genome Length = 184427 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1090 gctgcagaagctgatgctgta 1110 ||||||||||||||||||||| Sbjct: 74701 gctgcagaagctgatgctgta 74721 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 307,114,624 Number of extensions: 16850424 Number of successful extensions: 418793 Number of sequences better than 10.0: 110 Number of HSP's gapped: 418784 Number of HSP's successfully gapped: 148 Length of query: 1829 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1806 Effective length of database: 18,503,978,556 Effective search space: 33418185272136 Effective search space used: 33418185272136 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)