ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf43h18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK104806:Os12g0567700 509 e-144
2AK070647:Os12g0567700 509 e-144
3AK060350: 400 e-112
4AK108169: 362 e-100
5AK108964: 355 2e-98
6Os12g0572800:Os12g0572800 32 0.57
7AK068508:Os08g0500500 32 0.74
8AY034141: 31 1.3
9AK111079:Os03g0197900 31 1.7
10AK111408:Os11g0111000 30 2.2
11Os02g0241700:Os02g0241700 30 2.8
12AK100925:Os04g0602800 30 2.8
13Os05g0188700:Os05g0188700 29 4.8
14Os04g0205900:Os04g0205900 29 4.8
15AK101464:Os12g0616900 29 6.3
16AK071065:Os04g0469500 29 6.3
17AK063753:Os12g0616900 29 6.3
18AK068188:Os03g0399600 28 8.2
19AK060878:Os04g0602800 28 8.2

>AK104806:Os12g0567700 |
          Length = 261
 Score =  509 bits (1311), Expect = e-144
 Identities = 242/249 (97%), Positives = 246/249 (98%)
 Frame = +2

Query: 68  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 247
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTD+IHDPGRGAPLAK
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 60

Query: 248 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSVGNVLPLRSVPEGGVICNVEHHV 427
           VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLS+GNVLP+RSVPEG V+CNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPIRSVPEGAVVCNVEHHV 120

Query: 428 GDRGVFTRASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPML 607
           GDRGVF RASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPML
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPML 180

Query: 608 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 787
           KAGNAYHKYRVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 788 RRTGRLRGQ 814
           RRTGRLRGQ
Sbjct: 241 RRTGRLRGQ 249



to top

>AK070647:Os12g0567700 |
          Length = 261

 Score =  509 bits (1311), Expect = e-144
 Identities = 242/249 (97%), Positives = 246/249 (98%)
 Frame = +2

Query: 68  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 247
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTD+IHDPGRGAPLAK
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 60

Query: 248 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSVGNVLPLRSVPEGGVICNVEHHV 427
           VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLS+GNVLP+RSVPEG V+CNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPIRSVPEGAVVCNVEHHV 120

Query: 428 GDRGVFTRASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPML 607
           GDRGVF RASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPML
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPML 180

Query: 608 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 787
           KAGNAYHKYRVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 788 RRTGRLRGQ 814
           RRTGRLRGQ
Sbjct: 241 RRTGRLRGQ 249



to top

>AK060350: |
          Length = 256

 Score =  400 bits (1028), Expect = e-112
 Identities = 181/248 (72%), Positives = 219/248 (88%)
 Frame = +2

Query: 68  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 247
           MGRVIR QRKGAG +FKSHT HRKG A+FR+LD+ ER+GY+KGVV ++IHD GRGAPLA+
Sbjct: 1   MGRVIRGQRKGAGGIFKSHTKHRKGAAQFRALDYVERHGYIKGVVKEIIHDAGRGAPLAR 60

Query: 248 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSVGNVLPLRSVPEGGVICNVEHHV 427
           VT+R P+R+K + EL VAAEGMYTG F+Y G++AT++VGN+LPL ++PEG ++CNVE  V
Sbjct: 61  VTYRDPYRFKLKHELLVAAEGMYTGMFIYSGKKATMTVGNILPLSALPEGTIVCNVEAKV 120

Query: 428 GDRGVFTRASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPML 607
           GDRGVF RASGDYA+++SH+ D G ++++LPSG+KK VPS+CRAMIG +AGGGRT+KPML
Sbjct: 121 GDRGVFARASGDYAVIVSHDEDKGKTKLRLPSGSKKTVPSACRAMIGVIAGGGRTDKPML 180

Query: 608 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 787
           KAG A+HKY  KRN WP+VRGVAMNPVEHPHGGGNHQHIGH STVRRDAP G+KVGLIAA
Sbjct: 181 KAGRAWHKYHAKRNEWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDAPAGKKVGLIAA 240

Query: 788 RRTGRLRG 811
           RRTGRLRG
Sbjct: 241 RRTGRLRG 248



to top

>AK108169: |
          Length = 254

 Score =  362 bits (928), Expect = e-100
 Identities = 166/248 (66%), Positives = 200/248 (80%)
 Frame = +2

Query: 68  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 247
           MGRVIR QRKG GS+F ++T   K PA+FR+ DF ERNGY++GVV +++HD GRGAPLA+
Sbjct: 1   MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTYDFSERNGYIRGVVKEIVHDSGRGAPLAR 60

Query: 248 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSVGNVLPLRSVPEGGVICNVEHHV 427
           VTFR+P+++KH  E F+A EGMYTGQF+Y G+ A L++GNVLPL SVPEG V+ NVE   
Sbjct: 61  VTFRNPYKFKHNTETFIANEGMYTGQFIYAGKNAALTIGNVLPLASVPEGTVLTNVEDKS 120

Query: 428 GDRGVFTRASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPML 607
           GDRG   R SG+Y  VI HNPD G +R+KLPSGAKK++PSSCR M+G VAGGGRT+KP++
Sbjct: 121 GDRGALGRTSGNYVTVIGHNPDEGKTRVKLPSGAKKVLPSSCRGMVGIVAGGGRTDKPLM 180

Query: 608 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 787
           KA  A HK+  KRNSWP+ RGVAMNPV+HPHGGGNHQHIG AST+ R A  GQK GLIAA
Sbjct: 181 KASRAKHKFAAKRNSWPRTRGVAMNPVDHPHGGGNHQHIGKASTISRYAVQGQKAGLIAA 240

Query: 788 RRTGRLRG 811
           RRTG LRG
Sbjct: 241 RRTGLLRG 248



to top

>AK108964: |
          Length = 254

 Score =  355 bits (912), Expect = 2e-98
 Identities = 166/248 (66%), Positives = 198/248 (79%)
 Frame = +2

Query: 68  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 247
           MGRVIR QRKG GS+F ++T   K PA+FR+LD+ ER+GYL+GVV +++HD GRGAPLAK
Sbjct: 1   MGRVIRNQRKGRGSIFTANTRLNKAPAKFRNLDYAERHGYLRGVVREIVHDAGRGAPLAK 60

Query: 248 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSVGNVLPLRSVPEGGVICNVEHHV 427
           V FRHP+R+K   E F+A EGMYTGQF+Y G++A L+VGNVLPL  +PEG V+ NVE  +
Sbjct: 61  VVFRHPYRFKQVTETFIANEGMYTGQFIYAGKKAALTVGNVLPLGEMPEGTVVSNVEEKI 120

Query: 428 GDRGVFTRASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPML 607
           GDRG   R SG+Y  ++ HNPD G +RIKLPSGA+K+V S  R MIG VAGGGRT+KP+L
Sbjct: 121 GDRGSLGRTSGNYITIVGHNPDEGKTRIKLPSGARKVVHSGARGMIGIVAGGGRTDKPLL 180

Query: 608 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 787
           KA  A HK+ VKRNSWPK RGVAMNPV+HPHGGGNHQHIG AST+ R A  GQK GLIAA
Sbjct: 181 KASRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRYAVQGQKAGLIAA 240

Query: 788 RRTGRLRG 811
           RRTG LRG
Sbjct: 241 RRTGLLRG 248



to top

>Os12g0572800:Os12g0572800 |
          Length = 1132

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 12/153 (7%)
 Frame = +2

Query: 185  YLKGVVTDVIHDPGRGAPLAKVTFRHPFRYKHQKELFVAAEGMYTGQFV---YCGRRATL 355
            Y+ G   +V     RG+  A++    PFR+ H +E+      +  G+     Y  +R  L
Sbjct: 594  YMLGKRVEVKDAVARGSLPAEIQKIAPFRH-HSQEVPKVTHHLLDGELKEEHYIRKRRPL 652

Query: 356  SVGNVLPLRSVPEG---------GVICNVEHHVGDRGVFTRASGDYAIVISHNPDNGTSR 508
                  P + +P           G + +    +GDR   +   GD+  +     D+GT  
Sbjct: 653  ------PEKCLPSWFFIFRKWLPGFLADATERLGDRYPLSSLKGDFRAICRMELDHGTLG 706

Query: 509  IKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPML 607
                S   + +P  CR  +  V  G  T   +L
Sbjct: 707  YPKLSDFMRSLPGICRMCVVPVGSGPATHMVLL 739



to top

>AK068508:Os08g0500500 |
          Length = 558

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 24/75 (32%), Positives = 33/75 (44%)
 Frame = +2

Query: 476 ISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSW 655
           + H P   T+ I+LP G  KI  + C ++I    G  RT +PML          +   S 
Sbjct: 267 VFHVPGELTTCIRLPKGVLKI-KTDCASLIDHNEGIHRTPEPMLADQLGIQVSSLPCASA 325

Query: 656 PKVRGVAMNPVEHPH 700
             V G AMN   + H
Sbjct: 326 LDVHGFAMNSAYYYH 340



to top

>AY034141: |
          Length = 1161

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 33/150 (22%), Positives = 55/150 (36%), Gaps = 9/150 (6%)
 Frame = +2

Query: 185 YLKGVVTDVIHDPGRGAPLAKVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSVG 364
           Y+ G   +V     RG   A++     FR+ H +E+   A  M  G+         +   
Sbjct: 297 YMLGKRVEVKDAVARGFLPAEIQKTASFRH-HSQEVPKVAHHMLDGELK---EEHYIRKW 352

Query: 365 NVLPLRSVPEG---------GVICNVEHHVGDRGVFTRASGDYAIVISHNPDNGTSRIKL 517
             LP + +P           G + +    +GDR   +   GD+  +     D+GT     
Sbjct: 353 RPLPEKCLPSWFFIFRKWLPGFLADATERLGDRYPLSSLKGDFRAICRMELDHGTFGYPK 412

Query: 518 PSGAKKIVPSSCRAMIGQVAGGGRTEKPML 607
            S   + +P  CR  +  V  G  T   +L
Sbjct: 413 LSDFMRSLPGICRMCVVPVGSGPATHMVLL 442



to top

>AK111079:Os03g0197900 |
          Length = 275

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 792 LLAAMRPTFWPGGASRRTVEA*PICWWLPPPWGCSTGFMATPRT 661
           LLA   P F+PG   RR     P     PPP  C+ G+ A   T
Sbjct: 25  LLATDHPPFFPGSCPRRVPRRRP---QQPPPGACAAGYAADDLT 65



to top

>AK111408:Os11g0111000 |
          Length = 252

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 160 ARLRRAQRVPQGRRHRCHPRPRTWCAAGQGDLPPPVQVQAP 282
           ARLRRA+  P GR H   P PR   A+    LP  + +  P
Sbjct: 96  ARLRRARSHPAGRTHPLPPCPRRRSASSPVPLPAAMPLLFP 136



to top

>Os02g0241700:Os02g0241700 |
          Length = 387

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 39/164 (23%), Positives = 64/164 (39%)
 Frame = +2

Query: 317 TGQFVYCGRRATLSVGNVLPLRSVPEGGVICNVEHHVGDRGVFTRASGDYAIVISHNPDN 496
           TG+  Y     ++  G+  P+  +PEG V          RG+   +      V++H    
Sbjct: 218 TGRLPY-----SMGAGHSNPMNFLPEGFV-----ERTSGRGLAVASWAPQVRVLAH---- 263

Query: 497 GTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSWPKVRGVA 676
                  P+ A  +      + +  V+ G     PM+ A   Y + ++      +V GVA
Sbjct: 264 -------PATAAFVSHCGWNSTLESVSSG----VPMI-AWPLYAEQKMNTVILTEVAGVA 311

Query: 677 MNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLR 808
           + PV H   GG       A+ V+    PG+K G    RR   L+
Sbjct: 312 LRPVAHGGDGGVVSRKEVAAAVKELMDPGEK-GSAVRRRARELQ 354



to top

>AK100925:Os04g0602800 |
          Length = 924

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 38/164 (23%), Positives = 57/164 (34%), Gaps = 13/164 (7%)
 Frame = +2

Query: 263 PFRYKHQKELFVAAEGMYTGQFVYCGRRATLSVGNVLPLRSVPEGGVICNVEHHVG---- 430
           P+ Y      F  + G Y G   +     +   GN + +   P G     +E        
Sbjct: 528 PYSYGSSYGSF-GSHGSYVGNAGHASSYGSFGDGNAVNMYYSPLGPGFKQIESSPDVRLR 586

Query: 431 -----DRGVFTRASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAM--IGQVAGGGR 589
                DRG+         + +  +P   T     P   +  +PS+   M   G  A GG 
Sbjct: 587 PRFSHDRGIRLSPGSTGPMSLGASPSQFT-----PPNYQMQIPSNSTGMHGSGSPASGGI 641

Query: 590 TEKPMLKAGNAYHKYRVKRNSWPKVRGVAMNPVEHP--HGGGNH 715
              P+ K  ++Y K R          G+ M P E+P  HG G H
Sbjct: 642 HGSPLGKTPSSYSKRR----------GLPMPPHEYPSQHGQGRH 675



to top

>Os05g0188700:Os05g0188700 |
          Length = 440

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 169 RRAQRVPQG-RRHRCHPRPRTWCAAGQGDLPPPVQVQAPEGAICRR 303
           RR +RV +G RRHR  PR     A G G  P P  V  P+    RR
Sbjct: 110 RRRRRVGRGGRRHRPQPRQPEGDAPGGGVPPRPPHVPPPQQQPPRR 155



to top

>Os04g0205900:Os04g0205900 |
          Length = 1076

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 423 WCSTLQMTPPSGTDRRGRTLPTESVARRPQ*TNWPVYIPSAATNSSFWCLYLNGW 259
           W ST   +PP+   RR    P   +A  P      V+    A  ++ WC  L+GW
Sbjct: 578 WASTT--SPPACLRRRRLVFPPARLAFMPPLLGVYVFTDRLAFAAADWCFRLHGW 630



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 33/119 (27%), Positives = 43/119 (36%), Gaps = 1/119 (0%)
 Frame = -3

Query: 423 WCSTLQMTPPSGTDRRGRTLPTESVARRPQ*TNWPVYIPSAATNSSFWCLYLNGWRKVTL 244
           W ST   +P S   RR   LP   +A  P      V+    A  ++ WC  L+GW     
Sbjct: 637 WAST--SSPTSRLVRRRLVLPPARLAFMPPLLGVYVFTDWLAFAAADWCFRLHGW----- 689

Query: 243 ASGAPRPGSWMTSVTTPLRYPLRSPKSSDLKRAGPLRWWVWDLKT-EPAPLR*ARITRP 70
               P       S ++P   P   P       AG     V  L+   PA LR  R+  P
Sbjct: 690 ----PLCRHCWASTSSPTGLPSPPPTGVSACTAGLYAAVVGRLRLHRPACLRRRRLVFP 744



to top

>AK101464:Os12g0616900 |
          Length = 391

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +2

Query: 731 ASTVRRDAPPGQKVGLIAARRTGRLRG 811
           AS   R A PG+ V ++AARR+ R RG
Sbjct: 19  ASAKPRSAAPGRSVRVVAARRSVRARG 45



to top

>AK071065:Os04g0469500 |
          Length = 487

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 38/122 (31%), Positives = 47/122 (38%)
 Frame = -3

Query: 441 TPRSPTWCSTLQMTPPSGTDRRGRTLPTESVARRPQ*TNWPVYIPSAATNSSFWCLYLNG 262
           TP SP+  S  +  P S   RR R  PT S  R P         PS +            
Sbjct: 34  TPPSPSRRSPSETCPCS---RRRRRRPTRSPTRSPATPTSTRRPPSTSP----------- 79

Query: 261 WRKVTLASGAPRPGSWMTSVTTPLRYPLRSPKSSDLKRAGPLRWWVWDLKTEPAPLR*AR 82
             +VT  S  P       S T+P   P R P+SS   RAGP       +  +PA  R A 
Sbjct: 80  --RVTSPSATP-------SSTSP---PRRRPRSSPTARAGPRA----GVAVDPARARAAV 123

Query: 81  IT 76
           +T
Sbjct: 124 VT 125



to top

>AK063753:Os12g0616900 |
          Length = 391

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +2

Query: 731 ASTVRRDAPPGQKVGLIAARRTGRLRG 811
           AS   R A PG+ V ++AARR+ R RG
Sbjct: 19  ASAKPRSAAPGRSVRVVAARRSVRARG 45



to top

>AK068188:Os03g0399600 |
          Length = 99

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
 Frame = +1

Query: 169 RRAQRVPQGRRHRCHPR------PRTWCAAGQGDLPPPVQV---QAPEGAICRRRGYVHR 321
           RR+  +P  R HRC PR      PR   +      PPP  V    +P  +   RR  + R
Sbjct: 8   RRSLALPAPRHHRCRPRFATVPAPRRRPSPLHRAAPPPAAVPHKSSPPSSAPPRRSPLRR 67

Query: 322 PVRLLRTP 345
             R    P
Sbjct: 68  RPRFAAVP 75



to top

>AK060878:Os04g0602800 |
          Length = 347

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
 Frame = +2

Query: 431 DRGVFTRASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAM--IGQVAGGGRTEKPM 604
           DRG+         + +  +P   T     P   +  +PS+   M   G  A GG    P+
Sbjct: 15  DRGIRLSPGSTGPMSLGASPSQFT-----PPNYQMQIPSNSTGMHGSGSPASGGIHGSPL 69

Query: 605 LKAGNAYHKYRVKRNSWPKVRGVAMNPVEHP--HGGGNH 715
            K  ++Y K R          G+ M P E+P  HG G H
Sbjct: 70  GKTPSSYSKRR----------GLPMPPHEYPSQHGQGRH 98


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 28,139,334
Number of extensions: 682651
Number of successful extensions: 2319
Number of sequences better than 10.0: 19
Number of HSP's gapped: 2317
Number of HSP's successfully gapped: 20
Length of query: 346
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 245
Effective length of database: 11,355,714
Effective search space: 2782149930
Effective search space used: 2782149930
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top