ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf46f15 |
|---|---|
| Clone Library Name | barley_pub |
>Q3TZ87:MARH9_MOUSE E3 ubiquitin-protein ligase MARCH9 - Mus musculus (Mouse)| Length = 348 Score = 58.9 bits (141), Expect = 6e-08 Identities = 23/56 (41%), Positives = 36/56 (64%) Frame = +3 Query: 513 LQMTECRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYE 680 L+ +CRIC + + L SPC C GSV+ H+ C+ RW +E+G +CE+C+ Y+ Sbjct: 105 LRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQ 160
>Q86YJ5:MARH9_HUMAN E3 ubiquitin-protein ligase MARCH9 - Homo sapiens (Human)| Length = 346 Score = 58.9 bits (141), Expect = 6e-08 Identities = 23/56 (41%), Positives = 36/56 (64%) Frame = +3 Query: 513 LQMTECRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYE 680 L+ +CRIC + + L SPC C GSV+ H+ C+ RW +E+G +CE+C+ Y+ Sbjct: 105 LRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQ 160
>Q5I0I2:MARH2_RAT E3 ubiquitin-protein ligase MARCH2 - Rattus norvegicus (Rat)| Length = 246 Score = 58.2 bits (139), Expect = 1e-07 Identities = 24/60 (40%), Positives = 35/60 (58%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAPPRP 707 CRIC E + +NL SPC CTG++ H++C+++W + CE+CH E PRP Sbjct: 64 CRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHT--EFAVEKRPRP 121
>Q99M02:MARH2_MOUSE E3 ubiquitin-protein ligase MARCH2 - Mus musculus (Mouse)| Length = 246 Score = 58.2 bits (139), Expect = 1e-07 Identities = 24/60 (40%), Positives = 35/60 (58%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAPPRP 707 CRIC E + +NL SPC CTG++ H++C+++W + CE+CH E PRP Sbjct: 64 CRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHT--EFAVEKRPRP 121
>Q9DBD2:MARH8_MOUSE E3 ubiquitin-protein ligase MARCH8 - Mus musculus (Mouse)| Length = 286 Score = 57.4 bits (137), Expect = 2e-07 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Frame = +3 Query: 417 KSSSSRDTTALPITGHSFFAVGDSMVPEEEPLLQMTECRICQ-EEDDIKNLESPCACTGS 593 K+ SS +T P++ S S+ P + + CRIC E DD L +PC CTGS Sbjct: 48 KAGSSPPSTTAPVSAFS----RTSVTPSNQDI-----CRICHCEGDDESPLITPCHCTGS 98 Query: 594 VKYAHRACVQRWCNEKGDVTCEIC 665 + + H+AC+Q+W CE+C Sbjct: 99 LHFVHQACLQQWIKSSDTRCCELC 122
>Q5XIE5:MARH3_RAT E3 ubiquitin-protein ligase MARCH3 - Rattus norvegicus (Rat)| Length = 253 Score = 57.4 bits (137), Expect = 2e-07 Identities = 24/69 (34%), Positives = 35/69 (50%) Frame = +3 Query: 501 EEPLLQMTECRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYE 680 + P CRIC E ++L SPC CTG++ HR+C++ W + CE+CH + Sbjct: 62 QSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH--FR 119 Query: 681 HGYTAPPRP 707 PRP Sbjct: 120 FAVERKPRP 128
>Q8BRX9:MARH3_MOUSE E3 ubiquitin-protein ligase MARCH3 - Mus musculus (Mouse)| Length = 218 Score = 57.4 bits (137), Expect = 2e-07 Identities = 24/69 (34%), Positives = 35/69 (50%) Frame = +3 Query: 501 EEPLLQMTECRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYE 680 + P CRIC E ++L SPC CTG++ HR+C++ W + CE+CH + Sbjct: 62 QSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH--FR 119 Query: 681 HGYTAPPRP 707 PRP Sbjct: 120 FAVERKPRP 128
>Q86UD3:MARH3_HUMAN E3 ubiquitin-protein ligase MARCH3 - Homo sapiens (Human)| Length = 253 Score = 57.4 bits (137), Expect = 2e-07 Identities = 24/69 (34%), Positives = 35/69 (50%) Frame = +3 Query: 501 EEPLLQMTECRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYE 680 + P CRIC E ++L SPC CTG++ HR+C++ W + CE+CH + Sbjct: 62 QSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH--FR 119 Query: 681 HGYTAPPRP 707 PRP Sbjct: 120 FAVERKPRP 128
>A0JN69:MARH3_BOVIN E3 ubiquitin-protein ligase MARCH3 - Bos taurus (Bovine)| Length = 253 Score = 57.4 bits (137), Expect = 2e-07 Identities = 24/69 (34%), Positives = 35/69 (50%) Frame = +3 Query: 501 EEPLLQMTECRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYE 680 + P CRIC E ++L SPC CTG++ HR+C++ W + CE+CH + Sbjct: 62 QSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH--FR 119 Query: 681 HGYTAPPRP 707 PRP Sbjct: 120 FAVERKPRP 128
>Q1LVZ2:MARH2_DANRE E3 ubiquitin-protein ligase MARCH2 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 249 Score = 57.4 bits (137), Expect = 2e-07 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Frame = +3 Query: 528 CRICQEEDDIKNLE---SPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAP 698 CRIC E D+ N E SPC CTG++ H++C+++W + CE+CH +T Sbjct: 64 CRICHEGQDVCNSEGLLSPCDCTGTLGTVHKSCLEKWLSSSNTSYCELCHTE----FTIE 119 Query: 699 PRPHP 713 RP P Sbjct: 120 RRPRP 124
>Q0P496:MARH4_DANRE E3 ubiquitin-protein ligase MARCH4 precursor - Danio rerio| (Zebrafish) (Brachydanio rerio) Length = 421 Score = 56.6 bits (135), Expect = 3e-07 Identities = 21/51 (41%), Positives = 33/51 (64%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYE 680 CRIC + + L SPC C+GSV+ H C+ +W +E+G +CE+C+ Y+ Sbjct: 143 CRICFQGPEQGELLSPCRCSGSVRCTHEPCLIKWISERGSWSCELCYYKYQ 193
>Q68FA7:MARH3_XENTR E3 ubiquitin-protein ligase MARCH3 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 251 Score = 56.2 bits (134), Expect = 4e-07 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAPPRP 707 CRIC E ++L SPC CTG++ HR+C++ W + CE+CH + PRP Sbjct: 69 CRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH--FRFSVERKPRP 126
>Q0IH10:MARH3_XENLA E3 ubiquitin-protein ligase MARCH3 - Xenopus laevis (African clawed| frog) Length = 252 Score = 56.2 bits (134), Expect = 4e-07 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAPPRP 707 CRIC E ++L SPC CTG++ HR+C++ W + CE+CH + PRP Sbjct: 70 CRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH--FRFSVERKPRP 127
>Q80TE3:MARH4_MOUSE E3 ubiquitin-protein ligase MARCH4 precursor - Mus musculus (Mouse)| Length = 409 Score = 55.5 bits (132), Expect = 6e-07 Identities = 22/50 (44%), Positives = 32/50 (64%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPY 677 CRIC + + L SPC C GSVK H+ C+ +W +E+G +CE+C+ Y Sbjct: 162 CRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKY 211
>Q9P2E8:MARH4_HUMAN E3 ubiquitin-protein ligase MARCH4 precursor - Homo sapiens (Human)| Length = 410 Score = 55.5 bits (132), Expect = 6e-07 Identities = 22/50 (44%), Positives = 32/50 (64%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPY 677 CRIC + + L SPC C GSVK H+ C+ +W +E+G +CE+C+ Y Sbjct: 163 CRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKY 212
>Q28EX7:MARH2_XENTR E3 ubiquitin-protein ligase MARCH2 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 246 Score = 55.1 bits (131), Expect = 8e-07 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAPPRP 707 CRIC E + + L SPC CTG++ H+ C+++W + CE+CH E PRP Sbjct: 64 CRICHEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHT--EFAVERRPRP 121
>Q5PQ35:MARH2_XENLA E3 ubiquitin-protein ligase MARCH2 - Xenopus laevis (African clawed| frog) Length = 246 Score = 55.1 bits (131), Expect = 8e-07 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAPPRP 707 CRIC E + + L SPC CTG++ H+ C+++W + CE+CH E PRP Sbjct: 64 CRICHEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHT--EFAVERRPRP 121
>Q9P0N8:MARH2_HUMAN E3 ubiquitin-protein ligase MARCH2 - Homo sapiens (Human)| Length = 246 Score = 54.7 bits (130), Expect = 1e-06 Identities = 23/60 (38%), Positives = 34/60 (56%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAPPRP 707 CRIC E + + L SPC CTG++ H++C+++W + CE+CH E PRP Sbjct: 64 CRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHT--EFAVEKRPRP 121
>Q32L65:MARH2_BOVIN E3 ubiquitin-protein ligase MARCH2 - Bos taurus (Bovine)| Length = 245 Score = 54.7 bits (130), Expect = 1e-06 Identities = 19/50 (38%), Positives = 32/50 (64%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPY 677 CRIC E + ++L SPC C+G++ H++C++RW + CE+CH + Sbjct: 64 CRICHEGANGESLLSPCGCSGTLGAVHKSCLERWLSSSNTSYCELCHTEF 113
>Q5T0T0:MARH8_HUMAN E3 ubiquitin-protein ligase MARCH8 - Homo sapiens (Human)| Length = 291 Score = 54.3 bits (129), Expect = 1e-06 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Frame = +3 Query: 396 IEVTGAPKSSSSRDTTALPITGHSFFAVGDSMVPEEEPLLQMTECRICQ-EEDDIKNLES 572 I G+P S+S+ P++ S S+ P + + CRIC E DD L + Sbjct: 49 ISKAGSPPSASA----PAPVSSFS----RTSITPSSQDI-----CRICHCEGDDESPLIT 95 Query: 573 PCACTGSVKYAHRACVQRWCNEKGDVTCEIC 665 PC CTGS+ + H+AC+Q+W CE+C Sbjct: 96 PCHCTGSLHFVHQACLQQWIKSSDTRCCELC 126
>Q28IK8:MARH8_XENTR E3 ubiquitin-protein ligase MARCH8 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 264 Score = 53.1 bits (126), Expect = 3e-06 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Frame = +3 Query: 528 CRICQ-EEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEIC 665 CRIC E DD L +PC CTGS+ + H+AC+Q+W CE+C Sbjct: 53 CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELC 99
>Q5XH39:MARH8_XENLA E3 ubiquitin-protein ligase MARCH8 - Xenopus laevis (African clawed| frog) Length = 264 Score = 53.1 bits (126), Expect = 3e-06 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Frame = +3 Query: 528 CRICQ-EEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEIC 665 CRIC E DD L +PC CTGS+ + H+AC+Q+W CE+C Sbjct: 53 CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELC 99
>P40318:SSM4_YEAST E3 ubiquitin-protein ligase Doa10 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1319 Score = 52.0 bits (123), Expect = 7e-06 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 9/60 (15%) Frame = +3 Query: 528 CRICQEEDDIKN-LESPCACTGSVKYAHRACVQRWCNEK--------GDVTCEICHEPYE 680 CRIC+ E N L PC C GS+KY H +C+ W K DV C+ICH P + Sbjct: 39 CRICRGEATEDNPLFHPCKCRGSIKYMHESCLLEWVASKNIDISKPGADVKCDICHYPIQ 98
>Q0VD59:MARH8_BOVIN E3 ubiquitin-protein ligase MARCH8 - Bos taurus (Bovine)| Length = 289 Score = 52.0 bits (123), Expect = 7e-06 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +3 Query: 528 CRICQ-EEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEIC 665 CRIC E DD L +PC CTGS+ + H+ C+Q+W CE+C Sbjct: 78 CRICHCEGDDESPLITPCRCTGSLHFVHQTCLQQWIKSSDTRCCELC 124
>Q9WV66:MARH7_MOUSE E3 ubiquitin-protein ligase MARCH7 - Mus musculus (Mouse)| Length = 693 Score = 50.4 bits (119), Expect = 2e-05 Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 14/121 (11%) Frame = +3 Query: 351 DHLMLNVDRLMVPEPIEVTGAP----KSSSSRDTTALPITGHSFFAVGDSMVPEEEPLLQ 518 D++M+ VD ++P T KS+ SRD L S + DS EE L Sbjct: 499 DNVMITVD--IIPSGWNSTDGKNDKAKSAPSRDPEKLQKIKESLL-LEDSDDEEEGDL-- 553 Query: 519 MTECRICQ--EEDDIKNLESPCACTGSVKYAHRACVQRWCNEK--------GDVTCEICH 668 CRICQ L PC CTGS++Y H+ C+++W K TCE+C Sbjct: 554 ---CRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCK 610 Query: 669 E 671 E Sbjct: 611 E 611
>Q5R9W1:MARH6_PONPY E3 ubiquitin-protein ligase MARCH6 - Pongo pygmaeus (Orangutan)| Length = 910 Score = 50.4 bits (119), Expect = 2e-05 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +3 Query: 528 CRICQEEDDI-KNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAPPR 704 CR+C+ E K L PC CTGS+K+ H+ C+ +W CE+C +H + P Sbjct: 9 CRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELC----KHRFAFTPI 64 Query: 705 PHPD 716 PD Sbjct: 65 YSPD 68
>Q6ZQ89:MARH6_MOUSE E3 ubiquitin-protein ligase MARCH6 - Mus musculus (Mouse)| Length = 909 Score = 50.4 bits (119), Expect = 2e-05 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +3 Query: 528 CRICQEEDDI-KNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAPPR 704 CR+C+ E K L PC CTGS+K+ H+ C+ +W CE+C +H + P Sbjct: 9 CRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELC----KHRFAFTPI 64 Query: 705 PHPD 716 PD Sbjct: 65 YSPD 68
>O60337:MARH6_HUMAN E3 ubiquitin-protein ligase MARCH6 - Homo sapiens (Human)| Length = 910 Score = 50.4 bits (119), Expect = 2e-05 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +3 Query: 528 CRICQEEDDI-KNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAPPR 704 CR+C+ E K L PC CTGS+K+ H+ C+ +W CE+C +H + P Sbjct: 9 CRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELC----KHRFAFTPI 64 Query: 705 PHPD 716 PD Sbjct: 65 YSPD 68
>Q5R9W2:MARH7_PONPY E3 ubiquitin-protein ligase MARCH7 - Pongo pygmaeus (Orangutan)| Length = 707 Score = 49.7 bits (117), Expect = 4e-05 Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 10/98 (10%) Frame = +3 Query: 417 KSSSSRDTTALPITGHSFFAVGDSMVPEEEPLLQMTECRICQ--EEDDIKNLESPCACTG 590 KS+ SRD L + +S++ E+ + CRICQ L PC CTG Sbjct: 522 KSAPSRDPERLQ-------KIKESLLLEDSEEEEGDLCRICQMAAASSSNLLIEPCKCTG 574 Query: 591 SVKYAHRACVQRWCNEK--------GDVTCEICHEPYE 680 S++Y H+ C+++W K TCE+C E E Sbjct: 575 SLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEKLE 612
>Q9H992:MARH7_HUMAN E3 ubiquitin-protein ligase MARCH7 - Homo sapiens (Human)| Length = 704 Score = 49.7 bits (117), Expect = 4e-05 Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 10/98 (10%) Frame = +3 Query: 417 KSSSSRDTTALPITGHSFFAVGDSMVPEEEPLLQMTECRICQ--EEDDIKNLESPCACTG 590 KS+ SRD L + +S++ E+ + CRICQ L PC CTG Sbjct: 522 KSAPSRDPERLQ-------KIKESLLLEDSEEEEGDLCRICQMAAASSSNLLIEPCKCTG 574 Query: 591 SVKYAHRACVQRWCNEK--------GDVTCEICHEPYE 680 S++Y H+ C+++W K TCE+C E E Sbjct: 575 SLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEKLE 612
>Q5XI50:MARH7_RAT E3 ubiquitin-protein ligase MARCH7 - Rattus norvegicus (Rat)| Length = 692 Score = 49.3 bits (116), Expect = 5e-05 Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 10/95 (10%) Frame = +3 Query: 417 KSSSSRDTTALPITGHSFFAVGDSMVPEEEPLLQMTECRICQ--EEDDIKNLESPCACTG 590 KS+ SRD L S + DS EE L CRICQ L PC CTG Sbjct: 522 KSAPSRDPEKLQKIKESLL-LEDSDEEEEGDL-----CRICQMAAASSSNLLIEPCKCTG 575 Query: 591 SVKYAHRACVQRWCNEK--------GDVTCEICHE 671 S++Y H+ C+++W K TCE+C E Sbjct: 576 SLQYVHQECMKKWLQAKINSGSSLEAVTTCELCKE 610
>Q6NZQ8:MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1 - Mus musculus (Mouse)| Length = 289 Score = 48.9 bits (115), Expect = 6e-05 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Frame = +3 Query: 528 CRICQ-EEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEIC 665 CRIC E D+ L +PC CTG++++ H++C+ +W CE+C Sbjct: 80 CRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELC 126
>Q8TCQ1:MARH1_HUMAN E3 ubiquitin-protein ligase MARCH1 - Homo sapiens (Human)| Length = 289 Score = 48.9 bits (115), Expect = 6e-05 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Frame = +3 Query: 528 CRICQ-EEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEIC 665 CRIC E D+ L +PC CTG++++ H++C+ +W CE+C Sbjct: 80 CRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELC 126
>Q6NYK8:MARH5_DANRE E3 ubiquitin-protein ligase MARCH5 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 289 Score = 47.4 bits (111), Expect = 2e-04 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 6/66 (9%) Frame = +3 Query: 498 EEEPLLQMTECRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEK------GDVTCE 659 +E P C ++ED SPC C G K+ H++C+QRW +EK G V+C Sbjct: 5 DEPPEKHCWVCFATEKEDRAAEWVSPCRCKGCTKWIHQSCLQRWLDEKQKGNSGGAVSCP 64 Query: 660 ICHEPY 677 C Y Sbjct: 65 QCGTEY 70
>Q20977:STATB_CAEEL Signal transducer and activator of transcription b - Caenorhabditis| elegans Length = 966 Score = 47.0 bits (110), Expect = 2e-04 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPY 677 CRICQ + ++ PC C G++ H C+ +W N TCEIC Y Sbjct: 52 CRICQMHEG--DMVRPCDCAGTMGDVHEECLTKWVNMSNKKTCEICKSEY 99
>Q3KNM2:MARH5_MOUSE E3 ubiquitin-protein ligase MARCH5 - Mus musculus (Mouse)| Length = 278 Score = 47.0 bits (110), Expect = 2e-04 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 11/70 (15%) Frame = +3 Query: 501 EEPLLQMTE--CRIC---QEEDDIKNLESPCACTGSVKYAHRACVQRWCNEK------GD 647 ++ L QM + C +C E+D PC C GS K+ H+AC+QRW +EK Sbjct: 3 DQALQQMLDRSCWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTAR 62 Query: 648 VTCEICHEPY 677 V C C+ Y Sbjct: 63 VACPQCNAEY 72
>Q9NX47:MARH5_HUMAN E3 ubiquitin-protein ligase MARCH5 - Homo sapiens (Human)| Length = 278 Score = 47.0 bits (110), Expect = 2e-04 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 11/70 (15%) Frame = +3 Query: 501 EEPLLQMTE--CRIC---QEEDDIKNLESPCACTGSVKYAHRACVQRWCNEK------GD 647 ++ L QM + C +C E+D PC C GS K+ H+AC+QRW +EK Sbjct: 3 DQALQQMLDRSCWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTAR 62 Query: 648 VTCEICHEPY 677 V C C+ Y Sbjct: 63 VACPQCNAEY 72
>Q0X0A5:MARH5_CERAE E3 ubiquitin-protein ligase MARCH5 - Cercopithecus aethiops (Green| monkey) (Grivet) Length = 278 Score = 47.0 bits (110), Expect = 2e-04 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 11/70 (15%) Frame = +3 Query: 501 EEPLLQMTE--CRIC---QEEDDIKNLESPCACTGSVKYAHRACVQRWCNEK------GD 647 ++ L QM + C +C E+D PC C GS K+ H+AC+QRW +EK Sbjct: 3 DQALQQMLDRSCWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTAR 62 Query: 648 VTCEICHEPY 677 V C C+ Y Sbjct: 63 VACPQCNAEY 72
>Q3ZC24:MARH5_BOVIN E3 ubiquitin-protein ligase MARCH5 - Bos taurus (Bovine)| Length = 278 Score = 47.0 bits (110), Expect = 2e-04 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 11/70 (15%) Frame = +3 Query: 501 EEPLLQMTE--CRIC---QEEDDIKNLESPCACTGSVKYAHRACVQRWCNEK------GD 647 ++ L QM + C +C E+D PC C GS K+ H+AC+QRW +EK Sbjct: 3 DQALQQMLDRSCWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTAR 62 Query: 648 VTCEICHEPY 677 V C C+ Y Sbjct: 63 VACPQCNAEY 72
>Q6GM44:MARH5_XENLA E3 ubiquitin-protein ligase MARCH5 - Xenopus laevis (African clawed| frog) Length = 283 Score = 45.8 bits (107), Expect = 5e-04 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEK------GDVTCEICHEPY 677 C E+D PC C GS K+ H+AC+QRW +EK V C C+ Y Sbjct: 20 CFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 75
>P27426:VIE1_BHV4D Probable E3 ubiquitin-protein ligase IE1 - Bovine herpesvirus 4| (strain DN-599) (BoHV-4) (Movar virus) Length = 285 Score = 44.3 bits (103), Expect = 0.001 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = +3 Query: 525 ECRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYE 680 +C IC++ + + C C G ++Y H C++ W + G+ C+ C PY+ Sbjct: 131 QCWICRDGESLPEARY-CNCYGDLQYCHEECLKTWISMSGEKKCKFCQTPYK 181
>Q5ZJ41:MARH5_CHICK E3 ubiquitin-protein ligase MARCH5 - Gallus gallus (Chicken)| Length = 281 Score = 44.3 bits (103), Expect = 0.001 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEK------GDVTCEICHEPY 677 C E+D PC C GS K+ H+ C+QRW +EK V C C+ Y Sbjct: 20 CFATDEDDRTAEWVRPCRCRGSTKWVHQTCLQRWVDEKQRGNSTARVACPQCNAEY 75
>P90489:MIR2_HHV8 E3 ubiquitin-protein ligase MIR2 - Human herpesvirus 8 (HHV-8)| (Kaposi's sarcoma-associated herpesvirus) Length = 256 Score = 42.0 bits (97), Expect = 0.007 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPY 677 C IC+EE + + PCACTG + H C+ W + C++C Y Sbjct: 15 CWICREEVGNEGIH-PCACTGELDVVHPQCLSTWLTVSRNTACQMCRVIY 63
>Q8NA82:RN190_HUMAN Probable E3 ubiquitin-protein ligase RNF190 - Homo sapiens (Human)| Length = 808 Score = 40.8 bits (94), Expect = 0.016 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 10/58 (17%) Frame = +3 Query: 528 CRICQEEDDIKN--LESPCACTGSVKYAHRACVQRWCNEK-------GDV-TCEICHE 671 CRICQ + L PC C GS+++ H+ C+++W K G V TCE+C + Sbjct: 659 CRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKTCEMCKQ 716
>P90495:MIR1_HHV8 E3 ubiquitin-protein ligase MIR1 - Human herpesvirus 8 (HHV-8)| (Kaposi's sarcoma-associated herpesvirus) Length = 333 Score = 40.8 bits (94), Expect = 0.016 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPY 677 C IC EE + + C CTG ++ HR+C+ W + C+IC Y Sbjct: 9 CWICNEELGNERFRA-CGCTGELENVHRSCLSTWLTISRNTACQICGVVY 57
>Q5XIV2:RN190_RAT Probable E3 ubiquitin-protein ligase RNF190 - Rattus norvegicus| (Rat) Length = 790 Score = 40.4 bits (93), Expect = 0.021 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 10/58 (17%) Frame = +3 Query: 528 CRICQEE--DDIKNLESPCACTGSVKYAHRACVQRWCNEK----GDV----TCEICHE 671 CRICQ L PC C GS+++ H+ C+++W K D+ TCE+C + Sbjct: 641 CRICQIAGGSPANPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLSTVKTCEMCKQ 698
>O41933:MIR1_MHV68 E3 ubiquitin-protein ligase MIR1 - Murid herpesvirus 4 (MuHV-4)| (Murine gammaherpesvirus 68) Length = 201 Score = 38.9 bits (89), Expect = 0.063 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = +3 Query: 528 CRIC-QEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPYEHGYTAPP 701 C IC Q E +K C C GS +H+ C++ W TC +C PY + P Sbjct: 8 CWICHQPEGPLKRF---CGCKGSCAVSHQDCLRGWLETSRRQTCALCGTPYSMKWKTKP 63
>P32225:VC07_SWPVK Probable E3 ubiquitin-protein ligase C7 - Swinepox virus (strain| Kasza) (SWPV) Length = 155 Score = 36.6 bits (83), Expect = 0.31 Identities = 13/50 (26%), Positives = 28/50 (56%) Frame = +3 Query: 528 CRICQEEDDIKNLESPCACTGSVKYAHRACVQRWCNEKGDVTCEICHEPY 677 C IC+++ I+ ++ C C K H C+++W + +C++C++ Y Sbjct: 5 CWICKDDYSIE--KNYCNCKNEYKVVHDECMKKWIQYSRERSCKLCNKEY 52
>Q61999:ODFP_MOUSE Outer dense fiber protein - Mus musculus (Mouse)| Length = 247 Score = 32.7 bits (73), Expect = 4.5 Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%) Frame = -1 Query: 1258 YSFGDSCKPANPMSPLPPAGRSSAGHLQGCGSCWGVAGESGAMVKCTP-LPC 1106 Y C P NP SP P + G CG C G G C P PC Sbjct: 189 YPCTSPCNPCNPCSPCSPCAPCACGPCGPCGPC----GPCGPCDPCNPCYPC 236 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 283,355,033 Number of extensions: 6510726 Number of successful extensions: 17769 Number of sequences better than 10.0: 49 Number of HSP's gapped: 17742 Number of HSP's successfully gapped: 49 Length of query: 539 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 421 Effective length of database: 68,319,629 Effective search space: 28762563809 Effective search space used: 28762563809 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
