| Clone Name | FLbaf46f15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107433.1| Zea mays PCO148931 mRNA sequence Length = 1033 Score = 505 bits (255), Expect = e-139 Identities = 429/487 (88%) Strand = Plus / Plus Query: 469 tttttgcagttggagacagcatggttcctgaagaagaacctcttctgcagatgacggagt 528 |||| ||||| ||||| ||||||||| |||||| |||||||||||||| || ||||| Sbjct: 545 ttttagcagtgggagaaagcatggtttctgaagcggaacctcttctgcaagtggtggagt 604 Query: 529 gccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgcttgcaccg 588 | || |||||||||||||||||| || || ||| ||||||| || ||||||||||| | Sbjct: 605 gtcgcatttgtcaggaggaagatagtatcaaaaatttagagagtccatgtgcttgcactg 664 Query: 589 gcagtgtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaaggagatg 648 ||||| |||||||||| |||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 665 gcagtctaaagtatgctcataggacttgtgtacaacgatggtgcaatgagaaaggagatg 724 Query: 649 tgacatgtgaaatctgccatgagccgtatgaacatgggtacactgcacctcccagacccc 708 | ||||||||||| || |||||||| |||||||||||||||||||||||||||||| || Sbjct: 725 taacatgtgaaatatgtcatgagccttatgaacatgggtacactgcacctcccagaggcc 784 Query: 709 atcctgatgaaactaccatcgatataagtggtggctggaccattactggcacagcatttg 768 ||||||||||||||||||| |||||||||||||| ||||| ||||| || || ||||||| Sbjct: 785 atcctgatgaaactaccattgatataagtggtgggtggacaattaccggtaccgcatttg 844 Query: 769 acttgcgtgatcctaggatcctggcagtagcacaaaaccacattatggaagctgaatatg 828 ||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||||| Sbjct: 845 acttgcgtgatcctaggatacttgcagtggcacaaaaccacatcatggaagctgaatatg 904 Query: 829 atgactattcagccacgaatgccagcactgctgccttttgccgttctgctgctcttgttt 888 |||| ||||| ||||| ||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 905 atgattattctgccacaaatgcgagcactgctgccttctgccgctctgctgctcttgttt 964 Query: 889 taatggctctcctattactaaggcatgcgttgacactaactgatgaagatgatgatgaca 948 ||||||||||| |||| | || || || |||| ||||||||||||||||| || |||| Sbjct: 965 taatggctctcttattgttgagacacgcactgactctaactgatgaagatgacgacgaca 1024 Query: 949 cttcagc 955 ||||||| Sbjct: 1025 cttcagc 1031
>ref|NM_001068422.1| Oryza sativa (japonica cultivar-group) Os08g0436200 (Os08g0436200) mRNA, complete cds Length = 1457 Score = 333 bits (168), Expect = 1e-87 Identities = 489/596 (82%) Strand = Plus / Plus Query: 567 gagagcccctgtgcttgcaccggcagtgtaaagtatgcgcatagggcttgtgtacaaaga 626 ||||| || ||||||||||| || ||| |||||||||| ||| ||||||| || || ||| Sbjct: 529 gagagtccatgtgcttgcactggaagtctaaagtatgctcatcgggcttgcgtgcagaga 588 Query: 627 tggtgcaatgagaaaggagatgtgacatgtgaaatctgccatgagccgtatgaacatggg 686 |||||| |||||||||||||| ||||||||||||| ||||||||||| || |||| ||| Sbjct: 589 tggtgcgatgagaaaggagatttgacatgtgaaatttgccatgagccatacaaacacggg 648 Query: 687 tacactgcacctcccagaccccatcctgatgaaactaccatcgatataagtggtggctgg 746 |||||||||| ||| ||| | ||||||||||| || ||||| |||||||||||||| ||| Sbjct: 649 tacactgcacttcctagagctcatcctgatgagacaaccattgatataagtggtggttgg 708 Query: 747 accattactggcacagcatttgacttgcgtgatcctaggatcctggcagtagcacaaaac 806 |||||||| |||||||||||||| |||| |||||| ||||| | ||| | |||||||| Sbjct: 709 accattaccggcacagcatttgatttgcatgatccaaggattattgcaatggcacaaaat 768 Query: 807 cacattatggaagctgaatatgatgactattcagccacgaatgccagcactgctgccttt 866 ||||| ||||||||||| |||||||| ||||||| || ||||| ||| ||||||||||| Sbjct: 769 cacataatggaagctgactatgatgattattcagtaacaaatgcgagctctgctgccttt 828 Query: 867 tgccgttctgctgctcttgttttaatggctctcctattactaaggcatgcgttgacacta 926 ||||| |||||||| ||| ||||||||||||| || | | ||||||| |||| |||| Sbjct: 829 tgccgctctgctgcgcttattttaatggctctgttagtgttgaggcatgtgttggtacta 888 Query: 927 actgatgaagatgatgatgacacttcagcaatgttttcacttttcttactgcgtgctgct 986 |||||||||||||| || ||| |||| ||||||||| ||||| |||| || | | Sbjct: 889 actgatgaagatgaagacgacgcttcttcaatgtttttgctttttctactacgagtcacc 948 Query: 987 ggttttcttctcccattctatataatggcttgggcaattagtatattgcagcgtcgcaga 1046 || ||||| || |||||||| || |||||||||||||| | ||| || ||| | || || Sbjct: 949 gggtttctgctaccattctacatcatggcttgggcaatcaatatcttacagggccgaagg 1008 Query: 1047 catcggcaggaggcagctgcgttggcagcaactgaggtggcattcatcctccagtctggg 1106 | |||||| || ||||| | || |||||||||||||||||||| || ||||| || Sbjct: 1009 cggaggcaggtagcggctgctctagctgcaactgaggtggcattcattctacagtcagga 1068 Query: 1107 caagggagaggagtgcatttcaccatagcaccagattctcctgccacgccccagca 1162 ||| | || || || |||||||||| ||||||||||| |||||||| || ||||| Sbjct: 1069 caaagaaggggcatgaatttcaccatcgcaccagattcccctgccacacctcagca 1124 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 346 tgaaggatcatctaatgctcaatgtt 371 ||||||||||||||||||| |||||| Sbjct: 311 tgaaggatcatctaatgcttaatgtt 336
>dbj|AK071857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118I21, full insert sequence Length = 1462 Score = 333 bits (168), Expect = 1e-87 Identities = 489/596 (82%) Strand = Plus / Plus Query: 567 gagagcccctgtgcttgcaccggcagtgtaaagtatgcgcatagggcttgtgtacaaaga 626 ||||| || ||||||||||| || ||| |||||||||| ||| ||||||| || || ||| Sbjct: 534 gagagtccatgtgcttgcactggaagtctaaagtatgctcatcgggcttgcgtgcagaga 593 Query: 627 tggtgcaatgagaaaggagatgtgacatgtgaaatctgccatgagccgtatgaacatggg 686 |||||| |||||||||||||| ||||||||||||| ||||||||||| || |||| ||| Sbjct: 594 tggtgcgatgagaaaggagatttgacatgtgaaatttgccatgagccatacaaacacggg 653 Query: 687 tacactgcacctcccagaccccatcctgatgaaactaccatcgatataagtggtggctgg 746 |||||||||| ||| ||| | ||||||||||| || ||||| |||||||||||||| ||| Sbjct: 654 tacactgcacttcctagagctcatcctgatgagacaaccattgatataagtggtggttgg 713 Query: 747 accattactggcacagcatttgacttgcgtgatcctaggatcctggcagtagcacaaaac 806 |||||||| |||||||||||||| |||| |||||| ||||| | ||| | |||||||| Sbjct: 714 accattaccggcacagcatttgatttgcatgatccaaggattattgcaatggcacaaaat 773 Query: 807 cacattatggaagctgaatatgatgactattcagccacgaatgccagcactgctgccttt 866 ||||| ||||||||||| |||||||| ||||||| || ||||| ||| ||||||||||| Sbjct: 774 cacataatggaagctgactatgatgattattcagtaacaaatgcgagctctgctgccttt 833 Query: 867 tgccgttctgctgctcttgttttaatggctctcctattactaaggcatgcgttgacacta 926 ||||| |||||||| ||| ||||||||||||| || | | ||||||| |||| |||| Sbjct: 834 tgccgctctgctgcgcttattttaatggctctgttagtgttgaggcatgtgttggtacta 893 Query: 927 actgatgaagatgatgatgacacttcagcaatgttttcacttttcttactgcgtgctgct 986 |||||||||||||| || ||| |||| ||||||||| ||||| |||| || | | Sbjct: 894 actgatgaagatgaagacgacgcttcttcaatgtttttgctttttctactacgagtcacc 953 Query: 987 ggttttcttctcccattctatataatggcttgggcaattagtatattgcagcgtcgcaga 1046 || ||||| || |||||||| || |||||||||||||| | ||| || ||| | || || Sbjct: 954 gggtttctgctaccattctacatcatggcttgggcaatcaatatcttacagggccgaagg 1013 Query: 1047 catcggcaggaggcagctgcgttggcagcaactgaggtggcattcatcctccagtctggg 1106 | |||||| || ||||| | || |||||||||||||||||||| || ||||| || Sbjct: 1014 cggaggcaggtagcggctgctctagctgcaactgaggtggcattcattctacagtcagga 1073 Query: 1107 caagggagaggagtgcatttcaccatagcaccagattctcctgccacgccccagca 1162 ||| | || || || |||||||||| ||||||||||| |||||||| || ||||| Sbjct: 1074 caaagaaggggcatgaatttcaccatcgcaccagattcccctgccacacctcagca 1129 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 346 tgaaggatcatctaatgctcaatgtt 371 ||||||||||||||||||| |||||| Sbjct: 316 tgaaggatcatctaatgcttaatgtt 341
>ref|NM_001069695.1| Oryza sativa (japonica cultivar-group) Os09g0413000 (Os09g0413000) mRNA, partial cds Length = 622 Score = 220 bits (111), Expect = 1e-53 Identities = 207/239 (86%) Strand = Plus / Plus Query: 942 gatgacacttcagcaatgttttcacttttcttactgcgtgctgctggttttcttctccca 1001 ||||| ||||| ||||||||||||||||| || ||||||||||||| ||||| || ||| Sbjct: 4 gatgatacttctgcaatgttttcactttttctattgcgtgctgctggatttctgctacca 63 Query: 1002 ttctatataatggcttgggcaattagtatattgcagcgtcgcagacatcggcaggaggca 1061 ||||||||||||||||||||| | ||||| |||||||| |||||||| || |||||||| Sbjct: 64 ttctatataatggcttgggcagtgagtatcttgcagcgccgcagacagcgacaggaggcg 123 Query: 1062 gctgcgttggcagcaactgaggtggcattcatcctccagtctgggcaagggagaggagtg 1121 ||||| || ||||||||||||||||||||||| || |||||||||||||| | |||||| Sbjct: 124 gctgccttagcagcaactgaggtggcattcattcttcagtctgggcaaggaaccggagtg 183 Query: 1122 catttcaccatagcaccagattctcctgccacgccccagcacgaaccgcaaccttgaag 1180 ||||||||||| ||||| ||||| || |||| || |||||||| || || |||||||| Sbjct: 184 catttcaccattgcaccggattcgccgaccacaccgcagcacgagccacagccttgaag 242
>dbj|AK062467.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-E03, full insert sequence Length = 622 Score = 220 bits (111), Expect = 1e-53 Identities = 207/239 (86%) Strand = Plus / Plus Query: 942 gatgacacttcagcaatgttttcacttttcttactgcgtgctgctggttttcttctccca 1001 ||||| ||||| ||||||||||||||||| || ||||||||||||| ||||| || ||| Sbjct: 4 gatgatacttctgcaatgttttcactttttctattgcgtgctgctggatttctgctacca 63 Query: 1002 ttctatataatggcttgggcaattagtatattgcagcgtcgcagacatcggcaggaggca 1061 ||||||||||||||||||||| | ||||| |||||||| |||||||| || |||||||| Sbjct: 64 ttctatataatggcttgggcagtgagtatcttgcagcgccgcagacagcgacaggaggcg 123 Query: 1062 gctgcgttggcagcaactgaggtggcattcatcctccagtctgggcaagggagaggagtg 1121 ||||| || ||||||||||||||||||||||| || |||||||||||||| | |||||| Sbjct: 124 gctgccttagcagcaactgaggtggcattcattcttcagtctgggcaaggaaccggagtg 183 Query: 1122 catttcaccatagcaccagattctcctgccacgccccagcacgaaccgcaaccttgaag 1180 ||||||||||| ||||| ||||| || |||| || |||||||| || || |||||||| Sbjct: 184 catttcaccattgcaccggattcgccgaccacaccgcagcacgagccacagccttgaag 242
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 192 bits (97), Expect = 3e-45 Identities = 136/149 (91%) Strand = Plus / Plus Query: 735 agtggtggctggaccattactggcacagcatttgacttgcgtgatcctaggatcctggca 794 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| Sbjct: 14620622 agtggtggctggaccattactggtactgcatttgacttgcgtgatcctaggatccttgca 14620681 Query: 795 gtagcacaaaaccacattatggaagctgaatatgatgactattcagccacgaatgccagc 854 || ||||| ||||||||||||||||||||||| ||||| || || ||||| ||||||||| Sbjct: 14620682 gttgcacagaaccacattatggaagctgaatacgatgattactctgccacaaatgccagc 14620741 Query: 855 actgctgccttttgccgttctgctgctct 883 |||||||| ||||| || ||||||||||| Sbjct: 14620742 actgctgctttttgtcgctctgctgctct 14620770 Score = 111 bits (56), Expect = 8e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 1053 caggaggcagctgcgttggcagcaactgaggtggcattcatcctccagtctgggcaaggg 1112 |||||||| ||||| || ||||||||||||||||||||||| || |||||||||||||| Sbjct: 14621544 caggaggcggctgccttagcagcaactgaggtggcattcattcttcagtctgggcaagga 14621603 Query: 1113 agaggagtgcatttcaccatagcaccagattctcctgccacgccccagcacgaaccgcaa 1172 | ||||||||||||||||| ||||| ||||| || |||| || |||||||| || || Sbjct: 14621604 accggagtgcatttcaccattgcaccggattcgccgaccacaccgcagcacgagccacag 14621663 Query: 1173 ccttgaag 1180 |||||||| Sbjct: 14621664 ccttgaag 14621671 Score = 99.6 bits (50), Expect = 3e-17 Identities = 125/150 (83%) Strand = Plus / Plus Query: 450 cccattacagggcattccttttttgcagttggagacagcatggttcctgaagaagaacct 509 |||| ||||| |||| ||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct: 14618580 cccactacagtgcatacctttttggcagttggagaaagcatggcccctgaagaagaacct 14618639 Query: 510 cttctgcagatgacggagtgccgtatttgtcaggaggaagatgacattaagaatctagag 569 ||||||||| || ||| || || ||||||||||||||||| || || ||||| ||| Sbjct: 14618640 cttctgcagttggtggaatgtcgcatttgtcaggaggaagacagtataaaaaatctggag 14618699 Query: 570 agcccctgtgcttgcaccggcagtgtaaag 599 ||||| ||||| || || |||||| ||||| Sbjct: 14618700 agcccatgtgcctgtactggcagtctaaag 14618729 Score = 89.7 bits (45), Expect = 3e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 976 tgcgtgctgctggttttcttctcccattctatataatggcttgggcaattagtatattgc 1035 ||||||||||||| ||||| || |||||||||||||||||||||||| | ||||| |||| Sbjct: 14621075 tgcgtgctgctggatttctgctaccattctatataatggcttgggcagtgagtatcttgc 14621134 Query: 1036 agcgtcgcagaca 1048 |||| |||||||| Sbjct: 14621135 agcgccgcagaca 14621147 Score = 83.8 bits (42), Expect = 2e-12 Identities = 66/74 (89%) Strand = Plus / Plus Query: 598 agtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaaggagatgtgacatgtg 657 ||||||| ||| |||||||||| ||| ||||||||||||||||||||||||| || |||| Sbjct: 14620288 agtatgctcatcgggcttgtgtgcaacgatggtgcaatgagaaaggagatgtaacgtgtg 14620347 Query: 658 aaatctgccatgag 671 |||| || |||||| Sbjct: 14620348 aaatttgtcatgag 14620361 Score = 75.8 bits (38), Expect = 4e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 888 ttaatggctctcctattactaaggcatgcgttgacactaactgatgaagatgatgatgac 947 ||||||||||| ||||| | || |||||| |||| ||||||||||||||||| ||||| Sbjct: 14620894 ttaatggctctgttattattgagacatgcgctgactctaactgatgaagatgacgatgat 14620953 Query: 948 acttcagcaatgttttca 965 ||||| |||||||||||| Sbjct: 14620954 acttctgcaatgttttca 14620971 Score = 60.0 bits (30), Expect = 3e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 670 agccgtatgaacatgggtacactgcacctcccagaccccatcctgatgaaactaccat 727 |||| |||||||| || |||||||||||| | || || |||||||||||||||||||| Sbjct: 14620444 agccatatgaacacggttacactgcacctactaggcctcatcctgatgaaactaccat 14620501 Score = 46.1 bits (23), Expect = 0.39 Identities = 41/47 (87%) Strand = Plus / Plus Query: 346 tgaaggatcatctaatgctcaatgttgatcgcctaatggtgcctgaa 392 ||||||||||||||||| | ||||||||| ||||||| ||||||| Sbjct: 14618476 tgaaggatcatctaatggtaaatgttgatgatctaatggcgcctgaa 14618522
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 192 bits (97), Expect = 3e-45 Identities = 136/149 (91%) Strand = Plus / Plus Query: 735 agtggtggctggaccattactggcacagcatttgacttgcgtgatcctaggatcctggca 794 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| Sbjct: 42289 agtggtggctggaccattactggtactgcatttgacttgcgtgatcctaggatccttgca 42348 Query: 795 gtagcacaaaaccacattatggaagctgaatatgatgactattcagccacgaatgccagc 854 || ||||| ||||||||||||||||||||||| ||||| || || ||||| ||||||||| Sbjct: 42349 gttgcacagaaccacattatggaagctgaatacgatgattactctgccacaaatgccagc 42408 Query: 855 actgctgccttttgccgttctgctgctct 883 |||||||| ||||| || ||||||||||| Sbjct: 42409 actgctgctttttgtcgctctgctgctct 42437 Score = 111 bits (56), Expect = 8e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 1053 caggaggcagctgcgttggcagcaactgaggtggcattcatcctccagtctgggcaaggg 1112 |||||||| ||||| || ||||||||||||||||||||||| || |||||||||||||| Sbjct: 43211 caggaggcggctgccttagcagcaactgaggtggcattcattcttcagtctgggcaagga 43270 Query: 1113 agaggagtgcatttcaccatagcaccagattctcctgccacgccccagcacgaaccgcaa 1172 | ||||||||||||||||| ||||| ||||| || |||| || |||||||| || || Sbjct: 43271 accggagtgcatttcaccattgcaccggattcgccgaccacaccgcagcacgagccacag 43330 Query: 1173 ccttgaag 1180 |||||||| Sbjct: 43331 ccttgaag 43338 Score = 99.6 bits (50), Expect = 3e-17 Identities = 125/150 (83%) Strand = Plus / Plus Query: 450 cccattacagggcattccttttttgcagttggagacagcatggttcctgaagaagaacct 509 |||| ||||| |||| ||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct: 40247 cccactacagtgcatacctttttggcagttggagaaagcatggcccctgaagaagaacct 40306 Query: 510 cttctgcagatgacggagtgccgtatttgtcaggaggaagatgacattaagaatctagag 569 ||||||||| || ||| || || ||||||||||||||||| || || ||||| ||| Sbjct: 40307 cttctgcagttggtggaatgtcgcatttgtcaggaggaagacagtataaaaaatctggag 40366 Query: 570 agcccctgtgcttgcaccggcagtgtaaag 599 ||||| ||||| || || |||||| ||||| Sbjct: 40367 agcccatgtgcctgtactggcagtctaaag 40396 Score = 89.7 bits (45), Expect = 3e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 976 tgcgtgctgctggttttcttctcccattctatataatggcttgggcaattagtatattgc 1035 ||||||||||||| ||||| || |||||||||||||||||||||||| | ||||| |||| Sbjct: 42742 tgcgtgctgctggatttctgctaccattctatataatggcttgggcagtgagtatcttgc 42801 Query: 1036 agcgtcgcagaca 1048 |||| |||||||| Sbjct: 42802 agcgccgcagaca 42814 Score = 83.8 bits (42), Expect = 2e-12 Identities = 66/74 (89%) Strand = Plus / Plus Query: 598 agtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaaggagatgtgacatgtg 657 ||||||| ||| |||||||||| ||| ||||||||||||||||||||||||| || |||| Sbjct: 41955 agtatgctcatcgggcttgtgtgcaacgatggtgcaatgagaaaggagatgtaacgtgtg 42014 Query: 658 aaatctgccatgag 671 |||| || |||||| Sbjct: 42015 aaatttgtcatgag 42028 Score = 75.8 bits (38), Expect = 4e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 888 ttaatggctctcctattactaaggcatgcgttgacactaactgatgaagatgatgatgac 947 ||||||||||| ||||| | || |||||| |||| ||||||||||||||||| ||||| Sbjct: 42561 ttaatggctctgttattattgagacatgcgctgactctaactgatgaagatgacgatgat 42620 Query: 948 acttcagcaatgttttca 965 ||||| |||||||||||| Sbjct: 42621 acttctgcaatgttttca 42638 Score = 60.0 bits (30), Expect = 3e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 670 agccgtatgaacatgggtacactgcacctcccagaccccatcctgatgaaactaccat 727 |||| |||||||| || |||||||||||| | || || |||||||||||||||||||| Sbjct: 42111 agccatatgaacacggttacactgcacctactaggcctcatcctgatgaaactaccat 42168 Score = 46.1 bits (23), Expect = 0.39 Identities = 41/47 (87%) Strand = Plus / Plus Query: 346 tgaaggatcatctaatgctcaatgttgatcgcctaatggtgcctgaa 392 ||||||||||||||||| | ||||||||| ||||||| ||||||| Sbjct: 40143 tgaaggatcatctaatggtaaatgttgatgatctaatggcgcctgaa 40189
>gb|AC157320.2| Zea mays clone ZMMBBb-7C14, complete sequence Length = 132140 Score = 184 bits (93), Expect = 7e-43 Identities = 138/153 (90%) Strand = Plus / Plus Query: 735 agtggtggctggaccattactggcacagcatttgacttgcgtgatcctaggatcctggca 794 |||||||| ||||| ||||| || || |||||||||||||||||||||||||| || ||| Sbjct: 20139 agtggtgggtggacaattaccggtaccgcatttgacttgcgtgatcctaggatacttgca 20198 Query: 795 gtagcacaaaaccacattatggaagctgaatatgatgactattcagccacgaatgccagc 854 || |||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 20199 gtggcacaaaaccacatcatggaagctgaatatgatgattattctgccacaaatgcgagc 20258 Query: 855 actgctgccttttgccgttctgctgctcttgtt 887 ||||||||||| ||||| ||||||||||||||| Sbjct: 20259 actgctgccttctgccgctctgctgctcttgtt 20291 Score = 101 bits (51), Expect = 8e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 670 agccgtatgaacatgggtacactgcacctcccagaccccatcctgatgaaactaccatcg 729 |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct: 19975 agccttatgaacatgggtacactgcacctcccagaggccatcctgatgaaactaccattg 20034 Query: 730 atataag 736 ||||||| Sbjct: 20035 atataag 20041 Score = 99.6 bits (50), Expect = 3e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 598 agtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaaggagatgtgacatgtg 657 ||||||| |||||| ||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 19815 agtatgctcataggacttgtgtacaacgatggtgcaatgagaaaggagatgtaacatgtg 19874 Query: 658 aaatctgccatgag 671 |||| || |||||| Sbjct: 19875 aaatatgtcatgag 19888 Score = 85.7 bits (43), Expect = 5e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 469 tttttgcagttggagacagcatggttcctgaagaagaacctcttctgcagatgacggagt 528 |||| ||||| ||||| ||||||||| |||||| |||||||||||||| || ||||| Sbjct: 17958 ttttagcagtgggagaaagcatggtttctgaagcggaacctcttctgcaagtggtggagt 18017 Query: 529 gccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgcttgcaccg 588 | || |||||||||||||||||| || || ||| ||||||| || ||||||||||| | Sbjct: 18018 gtcgcatttgtcaggaggaagatagtatcaaaaatttagagagtccatgtgcttgcactg 18077 Query: 589 gcagtgtaaag 599 ||||| ||||| Sbjct: 18078 gcagtctaaag 18088 Score = 79.8 bits (40), Expect = 3e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 1053 caggaggcagctgcgttggcagcaactgaggtggcattcatcctccagtctgggcaaggg 1112 |||||||||||||| | || ||| | ||||||||||||||||| ||||| || ||||| Sbjct: 21424 caggaggcagctgctctagctgcagcggaggtggcattcatcctgcagtcaggccaagga 21483 Query: 1113 agaggagtgcatttcaccatagcaccagattctcctgccacgccccagcacgaacc 1168 || ||||||||||||||||| ||||| || || || ||||| || ||||| ||||| Sbjct: 21484 aggggagtgcatttcaccatcgcaccggactccccggccacaccacagcatgaacc 21539 Score = 73.8 bits (37), Expect = 2e-09 Identities = 64/73 (87%) Strand = Plus / Plus Query: 976 tgcgtgctgctggttttcttctcccattctatataatggcttgggcaattagtatattgc 1035 |||||||||||||||| || || || ||||| || |||||||||||||| ||||| |||| Sbjct: 20562 tgcgtgctgctggtttcctgcttccgttctacatcatggcttgggcaatcagtatcttgc 20621 Query: 1036 agcgtcgcagaca 1048 |||| |||||||| Sbjct: 20622 agcgccgcagaca 20634 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 919 tgacactaactgatgaagatgatgatgacacttcagcaatgttttca 965 |||| ||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 20423 tgactctaactgatgaagatgacgacgacacttcagcgatgttttca 20469
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 131 bits (66), Expect = 9e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 735 agtggtggctggaccattactggcacagcatttgacttgcgtgatcctaggatcctggca 794 |||||||| ||||||||||| |||||||||||||| |||| |||||| ||||| | ||| Sbjct: 21191698 agtggtggttggaccattaccggcacagcatttgatttgcatgatccaaggattattgca 21191757 Query: 795 gtagcacaaaaccacattatggaagctgaatatgatgactattcagccacgaatgccagc 854 | |||||||| ||||| ||||||||||| |||||||| ||||||| || ||||| ||| Sbjct: 21191758 atggcacaaaatcacataatggaagctgactatgatgattattcagtaacaaatgcgagc 21191817 Query: 855 actgctgccttttgccgttctgctgc 880 |||||||||||||||| |||||||| Sbjct: 21191818 tctgctgccttttgccgctctgctgc 21191843 Score = 83.8 bits (42), Expect = 2e-12 Identities = 66/74 (89%) Strand = Plus / Plus Query: 598 agtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaaggagatgtgacatgtg 657 ||||||| ||| ||||||| || || ||||||||| |||||||||||||| ||||||||| Sbjct: 21190450 agtatgctcatcgggcttgcgtgcagagatggtgcgatgagaaaggagatttgacatgtg 21190509 Query: 658 aaatctgccatgag 671 |||| ||||||||| Sbjct: 21190510 aaatttgccatgag 21190523 Score = 65.9 bits (33), Expect = 4e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 1074 gcaactgaggtggcattcatcctccagtctgggcaagggagaggagtgcatttcaccata 1133 |||||||||||||||||||| || ||||| || ||| | || || || |||||||||| Sbjct: 21192468 gcaactgaggtggcattcattctacagtcaggacaaagaaggggcatgaatttcaccatc 21192527 Query: 1134 gcaccagattctcctgccacgccccagca 1162 ||||||||||| |||||||| || ||||| Sbjct: 21192528 gcaccagattcccctgccacacctcagca 21192556 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 679 aacatgggtacactgcacctcccagaccccatcctgatgaaactaccatcgatataag 736 |||| ||||||||||||| ||| ||| | ||||||||||| || ||||| |||||||| Sbjct: 21191505 aacacgggtacactgcacttcctagagctcatcctgatgagacaaccattgatataag 21191562 Score = 46.1 bits (23), Expect = 0.39 Identities = 47/55 (85%) Strand = Plus / Plus Query: 909 aggcatgcgttgacactaactgatgaagatgatgatgacacttcagcaatgtttt 963 ||||||| |||| |||||||||||||||||| || ||| |||| ||||||||| Sbjct: 21191959 aggcatgtgttggtactaactgatgaagatgaagacgacgcttcttcaatgtttt 21192013 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 346 tgaaggatcatctaatgctcaatgtt 371 ||||||||||||||||||| |||||| Sbjct: 21190003 tgaaggatcatctaatgcttaatgtt 21190028
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 131 bits (66), Expect = 9e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 735 agtggtggctggaccattactggcacagcatttgacttgcgtgatcctaggatcctggca 794 |||||||| ||||||||||| |||||||||||||| |||| |||||| ||||| | ||| Sbjct: 17975 agtggtggttggaccattaccggcacagcatttgatttgcatgatccaaggattattgca 18034 Query: 795 gtagcacaaaaccacattatggaagctgaatatgatgactattcagccacgaatgccagc 854 | |||||||| ||||| ||||||||||| |||||||| ||||||| || ||||| ||| Sbjct: 18035 atggcacaaaatcacataatggaagctgactatgatgattattcagtaacaaatgcgagc 18094 Query: 855 actgctgccttttgccgttctgctgc 880 |||||||||||||||| |||||||| Sbjct: 18095 tctgctgccttttgccgctctgctgc 18120 Score = 83.8 bits (42), Expect = 2e-12 Identities = 66/74 (89%) Strand = Plus / Plus Query: 598 agtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaaggagatgtgacatgtg 657 ||||||| ||| ||||||| || || ||||||||| |||||||||||||| ||||||||| Sbjct: 16727 agtatgctcatcgggcttgcgtgcagagatggtgcgatgagaaaggagatttgacatgtg 16786 Query: 658 aaatctgccatgag 671 |||| ||||||||| Sbjct: 16787 aaatttgccatgag 16800 Score = 65.9 bits (33), Expect = 4e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 1074 gcaactgaggtggcattcatcctccagtctgggcaagggagaggagtgcatttcaccata 1133 |||||||||||||||||||| || ||||| || ||| | || || || |||||||||| Sbjct: 18745 gcaactgaggtggcattcattctacagtcaggacaaagaaggggcatgaatttcaccatc 18804 Query: 1134 gcaccagattctcctgccacgccccagca 1162 ||||||||||| |||||||| || ||||| Sbjct: 18805 gcaccagattcccctgccacacctcagca 18833 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 679 aacatgggtacactgcacctcccagaccccatcctgatgaaactaccatcgatataag 736 |||| ||||||||||||| ||| ||| | ||||||||||| || ||||| |||||||| Sbjct: 17782 aacacgggtacactgcacttcctagagctcatcctgatgagacaaccattgatataag 17839 Score = 46.1 bits (23), Expect = 0.39 Identities = 47/55 (85%) Strand = Plus / Plus Query: 909 aggcatgcgttgacactaactgatgaagatgatgatgacacttcagcaatgtttt 963 ||||||| |||| |||||||||||||||||| || ||| |||| ||||||||| Sbjct: 18236 aggcatgtgttggtactaactgatgaagatgaagacgacgcttcttcaatgtttt 18290 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 346 tgaaggatcatctaatgctcaatgtt 371 ||||||||||||||||||| |||||| Sbjct: 16280 tgaaggatcatctaatgcttaatgtt 16305
>ref|NM_001074756.1| Oryza sativa (japonica cultivar-group) Os11g0600700 (Os11g0600700) mRNA, complete cds Length = 1504 Score = 99.6 bits (50), Expect = 3e-17 Identities = 125/150 (83%) Strand = Plus / Plus Query: 523 cggagtgccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgctt 582 ||||||||||||| || |||||||| ||| ||| ||||| || |||| || ||||||| Sbjct: 460 cggagtgccgtatatgccaggaggaggatagcatcaagaacctcgagaagccttgtgctt 519 Query: 583 gcaccggcagtgtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaag 642 ||| ||||| | |||||||| ||||| |||||||| ||| | |||||||||||||||| Sbjct: 520 gcagtggcagcctcaagtatgctcatagagcttgtgtgcaacgctggtgcaatgagaaag 579 Query: 643 gagatgtgacatgtgaaatctgccatgagc 672 |||| | |||||||||||||| ||||||| Sbjct: 580 gagacattacatgtgaaatctgtcatgagc 609
>dbj|AK071098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081C09, full insert sequence Length = 1505 Score = 99.6 bits (50), Expect = 3e-17 Identities = 125/150 (83%) Strand = Plus / Plus Query: 523 cggagtgccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgctt 582 ||||||||||||| || |||||||| ||| ||| ||||| || |||| || ||||||| Sbjct: 460 cggagtgccgtatatgccaggaggaggatagcatcaagaacctcgagaagccttgtgctt 519 Query: 583 gcaccggcagtgtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaag 642 ||| ||||| | |||||||| ||||| |||||||| ||| | |||||||||||||||| Sbjct: 520 gcagtggcagcctcaagtatgctcatagagcttgtgtgcaacgctggtgcaatgagaaag 579 Query: 643 gagatgtgacatgtgaaatctgccatgagc 672 |||| | |||||||||||||| ||||||| Sbjct: 580 gagacattacatgtgaaatctgtcatgagc 609
>dbj|AK061258.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B06, full insert sequence Length = 1390 Score = 99.6 bits (50), Expect = 3e-17 Identities = 125/150 (83%) Strand = Plus / Plus Query: 523 cggagtgccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgctt 582 ||||||||||||| || |||||||| ||| ||| ||||| || |||| || ||||||| Sbjct: 358 cggagtgccgtatatgccaggaggaggatagcatcaagaacctcgagaagccttgtgctt 417 Query: 583 gcaccggcagtgtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaag 642 ||| ||||| | |||||||| ||||| |||||||| ||| | |||||||||||||||| Sbjct: 418 gcagtggcagcctcaagtatgctcatagagcttgtgtgcaacgctggtgcaatgagaaag 477 Query: 643 gagatgtgacatgtgaaatctgccatgagc 672 |||| | |||||||||||||| ||||||| Sbjct: 478 gagacattacatgtgaaatctgtcatgagc 507
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 77.8 bits (39), Expect = 1e-10 Identities = 69/79 (87%) Strand = Plus / Minus Query: 593 tgtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaaggagatgtgac 652 |||| ||||||| ||||| |||||||| ||| | |||||||||||||||||||| | || Sbjct: 126439 tgtacagtatgctcatagagcttgtgtgcaacgctggtgcaatgagaaaggagacattac 126380 Query: 653 atgtgaaatctgccatgag 671 |||||||||||| |||||| Sbjct: 126379 atgtgaaatctgtcatgag 126361
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 77.8 bits (39), Expect = 1e-10 Identities = 69/79 (87%) Strand = Plus / Plus Query: 593 tgtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaaggagatgtgac 652 |||| ||||||| ||||| |||||||| ||| | |||||||||||||||||||| | || Sbjct: 22214859 tgtacagtatgctcatagagcttgtgtgcaacgctggtgcaatgagaaaggagacattac 22214918 Query: 653 atgtgaaatctgccatgag 671 |||||||||||| |||||| Sbjct: 22214919 atgtgaaatctgtcatgag 22214937 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 792 gcagtagcacaaaaccacatt 812 ||||||||||||||||||||| Sbjct: 4758947 gcagtagcacaaaaccacatt 4758967
>gb|AY103639.1| Zea mays PCO142382 mRNA sequence Length = 1209 Score = 71.9 bits (36), Expect = 7e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 524 ggagtgccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgcttg 583 ||||||||| ||||| |||||||| || || ||||| || ||||||||||| ||||| Sbjct: 265 ggagtgccgcatttgccaggaggaggacctcaggaagaacctcgagagcccctgcgcttg 324 Query: 584 caccggcagtgtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaagg 643 || |||||| | |||||||| || || | ||||| ||| ||||||||||||||||||| Sbjct: 325 caacggcagcctcaagtatgctcacagagaatgtgtgcaacgatggtgcaatgagaaagg 384 Query: 644 agatgtgacatgtgaaatctgccatgag 671 ||| | |||||||||||||||||| Sbjct: 385 ggatacaatctgtgaaatctgccatgag 412 Score = 46.1 bits (23), Expect = 0.39 Identities = 32/35 (91%) Strand = Plus / Plus Query: 708 catcctgatgaaactaccatcgatataagtggtgg 742 |||| ||||||||||||||| || ||||||||||| Sbjct: 449 catcatgatgaaactaccatagagataagtggtgg 483 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Plus Query: 999 ccattctatataatggcttgggcaattagtatattgcagcgtc 1041 |||| |||||| ||||||||||| |||||||| ||||||||| Sbjct: 752 ccatgctatattatggcttgggctattagtatcatgcagcgtc 794
>emb|CT832352.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA118A01, full insert sequence Length = 1151 Score = 60.0 bits (30), Expect = 3e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 558 aagaatctagagagcccctgtgcttgcaccggcagtgtaaagtatgcgcatagggcttgt 617 ||||| || ||||||||||| ||||| | ||| || | ||||| || ||||| | ||| Sbjct: 326 aagaacctcgagagcccctgcgcttgtagcggtagcctcaagtacgctcatagagaatgt 385 Query: 618 gtacaaagatggtgcaatgagaaaggagatgtgacatgtgaaatctgcca 667 || |||||||||||||||||||||||||| | | |||||||||||||| Sbjct: 386 gtgcaaagatggtgcaatgagaaaggagacataatctgtgaaatctgcca 435
>ref|NM_001053754.1| Oryza sativa (japonica cultivar-group) Os02g0577100 (Os02g0577100) mRNA, complete cds Length = 1301 Score = 60.0 bits (30), Expect = 3e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 558 aagaatctagagagcccctgtgcttgcaccggcagtgtaaagtatgcgcatagggcttgt 617 ||||| || ||||||||||| ||||| | ||| || | ||||| || ||||| | ||| Sbjct: 219 aagaacctcgagagcccctgcgcttgtagcggtagcctcaagtacgctcatagagaatgt 278 Query: 618 gtacaaagatggtgcaatgagaaaggagatgtgacatgtgaaatctgcca 667 || |||||||||||||||||||||||||| | | |||||||||||||| Sbjct: 279 gtgcaaagatggtgcaatgagaaaggagacataatctgtgaaatctgcca 328 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| ||| | || |||| |||||| ||||||||||| |||||||| Sbjct: 654 gctgctggatttttgctgccatgctatatcatggcttgggctattagtat 703
>ref|NM_101292.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT1G14260) mRNA, complete cds Length = 1307 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 523 cggagtgccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgctt 582 ||||||| || ||||||||||| ||| ||| ||||||||||| ||||| || ||||||| Sbjct: 300 cggagtgtcggatttgtcaggatgaatgtgatattaagaatcttgagagtccttgtgctt 359 Query: 583 gcaccggcagtgtaaagtatgc 604 ||| ||||| |||||||||| Sbjct: 360 gcaatggcagcttaaagtatgc 381
>ref|NM_179329.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT1G14260) mRNA, complete cds Length = 1352 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 523 cggagtgccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgctt 582 ||||||| || ||||||||||| ||| ||| ||||||||||| ||||| || ||||||| Sbjct: 322 cggagtgtcggatttgtcaggatgaatgtgatattaagaatcttgagagtccttgtgctt 381 Query: 583 gcaccggcagtgtaaagtatgc 604 ||| ||||| |||||||||| Sbjct: 382 gcaatggcagcttaaagtatgc 403
>gb|BT024486.1| Arabidopsis thaliana At1g14260 mRNA, complete cds Length = 798 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 523 cggagtgccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgctt 582 ||||||| || ||||||||||| ||| ||| ||||||||||| ||||| || ||||||| Sbjct: 164 cggagtgtcggatttgtcaggatgaatgtgatattaagaatcttgagagtccttgtgctt 223 Query: 583 gcaccggcagtgtaaagtatgc 604 ||| ||||| |||||||||| Sbjct: 224 gcaatggcagcttaaagtatgc 245
>gb|AY084822.1| Arabidopsis thaliana clone 118756 mRNA, complete sequence Length = 1308 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 523 cggagtgccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgctt 582 ||||||| || ||||||||||| ||| ||| ||||||||||| ||||| || ||||||| Sbjct: 300 cggagtgtcggatttgtcaggatgaatgtgatattaagaatcttgagagtccttgtgctt 359 Query: 583 gcaccggcagtgtaaagtatgc 604 ||| ||||| |||||||||| Sbjct: 360 gcaatggcagcttaaagtatgc 381
>gb|DQ059090.1| Arabidopsis thaliana RING domain protein (At1g14260) mRNA, complete cds Length = 798 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 523 cggagtgccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgctt 582 ||||||| || ||||||||||| ||| ||| ||||||||||| ||||| || ||||||| Sbjct: 164 cggagtgtcggatttgtcaggatgaatgtgatattaagaatcttgagagtccttgtgctt 223 Query: 583 gcaccggcagtgtaaagtatgc 604 ||| ||||| |||||||||| Sbjct: 224 gcaatggcagcttaaagtatgc 245
>dbj|AK118121.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL19-40-F08 Length = 1352 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 523 cggagtgccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgctt 582 ||||||| || ||||||||||| ||| ||| ||||||||||| ||||| || ||||||| Sbjct: 322 cggagtgtcggatttgtcaggatgaatgtgatattaagaatcttgagagtccttgtgctt 381 Query: 583 gcaccggcagtgtaaagtatgc 604 ||| ||||| |||||||||| Sbjct: 382 gcaatggcagcttaaagtatgc 403
>dbj|AK071239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083D22, full insert sequence Length = 1304 Score = 60.0 bits (30), Expect = 3e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 558 aagaatctagagagcccctgtgcttgcaccggcagtgtaaagtatgcgcatagggcttgt 617 ||||| || ||||||||||| ||||| | ||| || | ||||| || ||||| | ||| Sbjct: 222 aagaacctcgagagcccctgcgcttgtagcggtagcctcaagtacgctcatagagaatgt 281 Query: 618 gtacaaagatggtgcaatgagaaaggagatgtgacatgtgaaatctgcca 667 || |||||||||||||||||||||||||| | | |||||||||||||| Sbjct: 282 gtgcaaagatggtgcaatgagaaaggagacataatctgtgaaatctgcca 331 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| ||| | || |||| |||||| ||||||||||| |||||||| Sbjct: 657 gctgctggatttttgctgccatgctatatcatggcttgggctattagtat 706
>emb|CT984264.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 510 Score = 58.0 bits (29), Expect = 1e-04 Identities = 80/97 (82%) Strand = Plus / Minus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtatattgcagcgt 1040 |||||||| |||||| | || | ||| |||||||||||||| || ||||| |||||||| Sbjct: 473 gctgctgggtttcttttgccctgctacataatggcttgggctatcagtatcttgcagcgc 414 Query: 1041 cgcagacatcggcaggaggcagctgcgttggcagcaa 1077 ||||| || | |||||||| || |||||||| |||| Sbjct: 413 cgcaggcagagacaggaggctgcagcgttggcggcaa 377
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Minus Query: 615 tgtgtacaaagatggtgcaatgagaaaggagatgtgacatgtgaaatctgcca 667 ||||| |||||||||||||||||||||||||| | | |||||||||||||| Sbjct: 22185426 tgtgtgcaaagatggtgcaatgagaaaggagacataatctgtgaaatctgcca 22185374 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Minus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| ||| | || |||| |||||| ||||||||||| |||||||| Sbjct: 22183951 gctgctggatttttgctgccatgctatatcatggcttgggctattagtat 22183902
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Minus Query: 615 tgtgtacaaagatggtgcaatgagaaaggagatgtgacatgtgaaatctgcca 667 ||||| |||||||||||||||||||||||||| | | |||||||||||||| Sbjct: 81270 tgtgtgcaaagatggtgcaatgagaaaggagacataatctgtgaaatctgcca 81218 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Minus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| ||| | || |||| |||||| ||||||||||| |||||||| Sbjct: 79795 gctgctggatttttgctgccatgctatatcatggcttgggctattagtat 79746
>emb|CT980160.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 640 Score = 54.0 bits (27), Expect = 0.002 Identities = 108/135 (80%) Strand = Plus / Plus Query: 534 atttgtcaggaggaagatgacattaagaatctagagagcccctgtgcttgcaccggcagt 593 ||||| |||||||| ||| |||||||||| | |||| || |||||||||| |||||| Sbjct: 201 atttgccaggaggaggatagcattaagaatttggagactccttgtgcttgcagtggcagt 260 Query: 594 gtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgagaaaggagatgtgaca 653 | |||||||| || ||| ||||| || | |||||||||||||||||||| || | Sbjct: 261 ttgaagtatgctcacaggaaatgtgtgcagcggtggtgcaatgagaaaggagacgtaatt 320 Query: 654 tgtgaaatctgccat 668 |||||||| |||||| Sbjct: 321 tgtgaaatatgccat 335
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 523 cggagtgccgtatttgtcaggaggaagatgacattaagaatctagagagcccctgtgctt 582 ||||||| || ||||||||||| ||| ||| ||||||||||| ||||| || ||||||| Sbjct: 4442 cggagtgtcggatttgtcaggatgaatgtgatattaagaatcttgagagtccttgtgctt 4501 Query: 583 gca 585 ||| Sbjct: 4502 gca 4504
>ref|NM_201678.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT2G02960) mRNA, complete cds Length = 1560 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| |||||||| |||| |||||| ||||||||||| || ||||| Sbjct: 1077 gctgctggatttcttcttccatgctatatcatggcttgggccatcagtat 1126
>ref|NM_201676.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT2G02960) mRNA, complete cds Length = 1459 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| |||||||| |||| |||||| ||||||||||| || ||||| Sbjct: 976 gctgctggatttcttcttccatgctatatcatggcttgggccatcagtat 1025
>ref|NM_201677.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT2G02960) mRNA, complete cds Length = 1258 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| |||||||| |||| |||||| ||||||||||| || ||||| Sbjct: 775 gctgctggatttcttcttccatgctatatcatggcttgggccatcagtat 824
>ref|NM_179598.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT2G02960) mRNA, complete cds Length = 1245 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| |||||||| |||| |||||| ||||||||||| || ||||| Sbjct: 762 gctgctggatttcttcttccatgctatatcatggcttgggccatcagtat 811
>ref|NM_126348.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT2G02960) mRNA, complete cds Length = 1249 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| |||||||| |||| |||||| ||||||||||| || ||||| Sbjct: 766 gctgctggatttcttcttccatgctatatcatggcttgggccatcagtat 815
>gb|AY091335.1| Arabidopsis thaliana unknown protein (At2g02960) mRNA, complete cds Length = 847 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| |||||||| |||| |||||| ||||||||||| || ||||| Sbjct: 592 gctgctggatttcttcttccatgctatatcatggcttgggccatcagtat 641
>gb|AY065284.1| Arabidopsis thaliana unknown protein (At2g02960) mRNA, complete cds Length = 1245 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| |||||||| |||| |||||| ||||||||||| || ||||| Sbjct: 760 gctgctggatttcttcttccatgctatatcatggcttgggccatcagtat 809
>gb|AC004138.3| Arabidopsis thaliana chromosome 2 clone T17M13 map CIC11A04, complete sequence Length = 104016 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Minus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| |||||||| |||| |||||| ||||||||||| || ||||| Sbjct: 42923 gctgctggatttcttcttccatgctatatcatggcttgggccatcagtat 42874
>emb|BX820794.1|CNS0A9IB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1525 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| |||||||| |||| |||||| ||||||||||| || ||||| Sbjct: 1077 gctgctggatttcttcttccatgctatatcatggcttgggccatcagtat 1126
>emb|BX820739.1|CNS0A9LA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH65ZC01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1364 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| |||||||| |||| |||||| ||||||||||| || ||||| Sbjct: 976 gctgctggatttcttcttccatgctatatcatggcttgggccatcagtat 1025
>emb|BX821079.1|CNS0A986 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZE04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1216 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 981 gctgctggttttcttctcccattctatataatggcttgggcaattagtat 1030 |||||||| |||||||| |||| |||||| ||||||||||| || ||||| Sbjct: 775 gctgctggatttcttcttccatgctatatcatggcttgggccatcagtat 824
>ref|NM_125640.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT5G62460) mRNA, complete cds Length = 1310 Score = 50.1 bits (25), Expect = 0.025 Identities = 55/65 (84%) Strand = Plus / Plus Query: 984 gctggttttcttctcccattctatataatggcttgggcaattagtatattgcagcgtcgc 1043 ||||||||||| ||||| | || || ||||||||||| ||||||||||| || ||||| Sbjct: 877 gctggttttctcctcccgtgttacatcatggcttgggctattagtatattacaacgtcga 936 Query: 1044 agaca 1048 ||||| Sbjct: 937 agaca 941
>gb|AC144375.14| Medicago truncatula clone mth2-11p13, complete sequence Length = 123953 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Plus Query: 615 tgtgtacaaagatggtgcaatgagaaagg 643 ||||| ||||||||||||||||||||||| Sbjct: 2610 tgtgttcaaagatggtgcaatgagaaagg 2638
>gb|AY142052.1| Arabidopsis thaliana At5g62460/K19B1_7 mRNA, complete cds Length = 924 Score = 50.1 bits (25), Expect = 0.025 Identities = 55/65 (84%) Strand = Plus / Plus Query: 984 gctggttttcttctcccattctatataatggcttgggcaattagtatattgcagcgtcgc 1043 ||||||||||| ||||| | || || ||||||||||| ||||||||||| || ||||| Sbjct: 703 gctggttttctcctcccgtgttacatcatggcttgggctattagtatattacaacgtcga 762 Query: 1044 agaca 1048 ||||| Sbjct: 763 agaca 767
>emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i20, COMPLETE SEQUENCE Length = 123473 Score = 50.1 bits (25), Expect = 0.025 Identities = 55/65 (84%) Strand = Plus / Plus Query: 966 cttttcttactgcgtgctgctggttttcttctcccattctatataatggcttgggcaatt 1025 ||||||||||| || |||||||| ||||| | || | |||||| |||||||||||||| Sbjct: 37019 cttttcttacttcgagctgctggatttctcttaccttgctatattatggcttgggcaatc 37078 Query: 1026 agtat 1030 ||||| Sbjct: 37079 agtat 37083
>gb|AY060581.1| Arabidopsis thaliana AT5g62460/K19B1_7 mRNA, complete cds Length = 1290 Score = 50.1 bits (25), Expect = 0.025 Identities = 55/65 (84%) Strand = Plus / Plus Query: 984 gctggttttcttctcccattctatataatggcttgggcaattagtatattgcagcgtcgc 1043 ||||||||||| ||||| | || || ||||||||||| ||||||||||| || ||||| Sbjct: 857 gctggttttctcctcccgtgttacatcatggcttgggctattagtatattacaacgtcga 916 Query: 1044 agaca 1048 ||||| Sbjct: 917 agaca 921
>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1 Length = 69927 Score = 50.1 bits (25), Expect = 0.025 Identities = 55/65 (84%) Strand = Plus / Plus Query: 984 gctggttttcttctcccattctatataatggcttgggcaattagtatattgcagcgtcgc 1043 ||||||||||| ||||| | || || ||||||||||| ||||||||||| || ||||| Sbjct: 16481 gctggttttctcctcccgtgttacatcatggcttgggctattagtatattacaacgtcga 16540 Query: 1044 agaca 1048 ||||| Sbjct: 16541 agaca 16545
>emb|BX830110.1|CNS0A02Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1252 Score = 50.1 bits (25), Expect = 0.025 Identities = 55/65 (84%) Strand = Plus / Plus Query: 984 gctggttttcttctcccattctatataatggcttgggcaattagtatattgcagcgtcgc 1043 ||||||||||| ||||| | || || ||||||||||| ||||||||||| || ||||| Sbjct: 833 gctggttttctcctcccgtgttacatcatggcttgggctattagtatattacaacgtcga 892 Query: 1044 agaca 1048 ||||| Sbjct: 893 agaca 897
>emb|BX829421.1|CNS0A023 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1238 Score = 50.1 bits (25), Expect = 0.025 Identities = 55/65 (84%) Strand = Plus / Plus Query: 984 gctggttttcttctcccattctatataatggcttgggcaattagtatattgcagcgtcgc 1043 ||||||||||| ||||| | || || ||||||||||| ||||||||||| || ||||| Sbjct: 861 gctggttttctcctcccgtgttacatcatggcttgggctattagtatattacaacgtcga 920 Query: 1044 agaca 1048 ||||| Sbjct: 921 agaca 925
>emb|BX830793.1|CNS09YMH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1274 Score = 50.1 bits (25), Expect = 0.025 Identities = 55/65 (84%) Strand = Plus / Plus Query: 984 gctggttttcttctcccattctatataatggcttgggcaattagtatattgcagcgtcgc 1043 ||||||||||| ||||| | || || ||||||||||| ||||||||||| || ||||| Sbjct: 877 gctggttttctcctcccgtgttacatcatggcttgggctattagtatattacaacgtcga 936 Query: 1044 agaca 1048 ||||| Sbjct: 937 agaca 941
>gb|AC189597.1| Brassica rapa subsp. pekinensis clone KBrH014E13, complete sequence Length = 101610 Score = 48.1 bits (24), Expect = 0.100 Identities = 48/56 (85%) Strand = Plus / Plus Query: 978 cgtgctgctggttttcttctcccattctatataatggcttgggcaattagtatatt 1033 ||||||||||||||||| ||||| | || || ||||||||||| || |||||||| Sbjct: 78395 cgtgctgctggttttctcctcccgtgttacatcatggcttgggccatcagtatatt 78450
>ref|NM_147230.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT2G01275) mRNA, complete cds Length = 1398 Score = 48.1 bits (24), Expect = 0.100 Identities = 54/64 (84%) Strand = Plus / Plus Query: 580 cttgcaccggcagtgtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgaga 639 |||||| |||||| || ||||||||||||||| || ||||| |||||||| || |||| Sbjct: 415 cttgcagcggcagcgtcaagtatgcgcataggaggtgcgtacagagatggtgtaacgaga 474 Query: 640 aagg 643 |||| Sbjct: 475 aagg 478
>ref|NM_001035859.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT2G01275) mRNA, complete cds Length = 1361 Score = 48.1 bits (24), Expect = 0.100 Identities = 54/64 (84%) Strand = Plus / Plus Query: 580 cttgcaccggcagtgtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgaga 639 |||||| |||||| || ||||||||||||||| || ||||| |||||||| || |||| Sbjct: 335 cttgcagcggcagcgtcaagtatgcgcataggaggtgcgtacagagatggtgtaacgaga 394 Query: 640 aagg 643 |||| Sbjct: 395 aagg 398
>gb|BT012639.1| Arabidopsis thaliana At2g01275 mRNA, complete cds Length = 780 Score = 48.1 bits (24), Expect = 0.100 Identities = 54/64 (84%) Strand = Plus / Plus Query: 580 cttgcaccggcagtgtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgaga 639 |||||| |||||| || ||||||||||||||| || ||||| |||||||| || |||| Sbjct: 227 cttgcagcggcagcgtcaagtatgcgcataggaggtgcgtacagagatggtgtaacgaga 286 Query: 640 aagg 643 |||| Sbjct: 287 aagg 290
>emb|BX819618.1|CNS0A9S0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZH06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1080 Score = 48.1 bits (24), Expect = 0.100 Identities = 54/64 (84%) Strand = Plus / Plus Query: 580 cttgcaccggcagtgtaaagtatgcgcatagggcttgtgtacaaagatggtgcaatgaga 639 |||||| |||||| || ||||||||||||||| || ||||| |||||||| || |||| Sbjct: 415 cttgcagcggcagcgtcaagtatgcgcataggaggtgcgtacagagatggtgtaacgaga 474 Query: 640 aagg 643 |||| Sbjct: 475 aagg 478
>ref|XM_001154801.1| PREDICTED: Pan troglodytes solute carrier family 22, member 16, transcript variant 1 (SLC22A16), mRNA Length = 2270 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 gcattccttttttgcagttgga 482 |||||||||||||||||||||| Sbjct: 805 gcattccttttttgcagttgga 826
>ref|XM_001155073.1| PREDICTED: Pan troglodytes solute carrier family 22, member 16, transcript variant 3 (SLC22A16), mRNA Length = 1937 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 gcattccttttttgcagttgga 482 |||||||||||||||||||||| Sbjct: 768 gcattccttttttgcagttgga 789
>ref|XM_001155022.1| PREDICTED: Pan troglodytes solute carrier family 22, member 16, transcript variant 2 (SLC22A16), mRNA Length = 2089 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 gcattccttttttgcagttgga 482 |||||||||||||||||||||| Sbjct: 920 gcattccttttttgcagttgga 941
>ref|XM_518688.2| PREDICTED: Pan troglodytes solute carrier family 22, member 16, transcript variant 4 (SLC22A16), mRNA Length = 1974 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 gcattccttttttgcagttgga 482 |||||||||||||||||||||| Sbjct: 805 gcattccttttttgcagttgga 826
>dbj|AK226509.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL06-82-N16 Length = 1296 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 627 tggtgcaatgagaaaggagatgtgacatgtgaaatctgccatgagccgtatgaacatggg 686 ||||| ||||||||||| || | || |||||||| || || |||| ||| ||||||| Sbjct: 493 tggtgtaatgagaaaggcgacataacctgtgaaatatgtcaccagccttatcaacatgga 552 Query: 687 tacactgcacctcc 700 |||||||||||||| Sbjct: 553 tacactgcacctcc 566 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 978 cgtgctgctggttttcttctcccat 1002 ||||||||||||||||| ||||||| Sbjct: 853 cgtgctgctggttttctcctcccat 877
>ref|NM_202667.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT3G47550) mRNA, complete cds Length = 1835 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 627 tggtgcaatgagaaaggagatgtgacatgtgaaatctgccatgagccgtatgaacatggg 686 ||||| ||||||||||| || | || |||||||| || || |||| ||| ||||||| Sbjct: 647 tggtgtaatgagaaaggcgacataacctgtgaaatatgtcaccagccttatcaacatgga 706 Query: 687 tacactgcacctcc 700 |||||||||||||| Sbjct: 707 tacactgcacctcc 720 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 978 cgtgctgctggttttcttctcccat 1002 ||||||||||||||||| ||||||| Sbjct: 1007 cgtgctgctggttttctcctcccat 1031
>ref|NM_180337.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT3G47550) mRNA, complete cds Length = 1674 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 627 tggtgcaatgagaaaggagatgtgacatgtgaaatctgccatgagccgtatgaacatggg 686 ||||| ||||||||||| || | || |||||||| || || |||| ||| ||||||| Sbjct: 493 tggtgtaatgagaaaggcgacataacctgtgaaatatgtcaccagccttatcaacatgga 552 Query: 687 tacactgcacctcc 700 |||||||||||||| Sbjct: 553 tacactgcacctcc 566 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 978 cgtgctgctggttttcttctcccat 1002 ||||||||||||||||| ||||||| Sbjct: 853 cgtgctgctggttttctcctcccat 877
>ref|NM_114623.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT3G47550) mRNA, complete cds Length = 1681 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 627 tggtgcaatgagaaaggagatgtgacatgtgaaatctgccatgagccgtatgaacatggg 686 ||||| ||||||||||| || | || |||||||| || || |||| ||| ||||||| Sbjct: 493 tggtgtaatgagaaaggcgacataacctgtgaaatatgtcaccagccttatcaacatgga 552 Query: 687 tacactgcacctcc 700 |||||||||||||| Sbjct: 553 tacactgcacctcc 566 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 978 cgtgctgctggttttcttctcccat 1002 ||||||||||||||||| ||||||| Sbjct: 853 cgtgctgctggttttctcctcccat 877
>ref|NM_180336.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT3G47550) mRNA, complete cds Length = 1751 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 627 tggtgcaatgagaaaggagatgtgacatgtgaaatctgccatgagccgtatgaacatggg 686 ||||| ||||||||||| || | || |||||||| || || |||| ||| ||||||| Sbjct: 493 tggtgtaatgagaaaggcgacataacctgtgaaatatgtcaccagccttatcaacatgga 552 Query: 687 tacactgcacctcc 700 |||||||||||||| Sbjct: 553 tacactgcacctcc 566 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 978 cgtgctgctggttttcttctcccat 1002 ||||||||||||||||| ||||||| Sbjct: 923 cgtgctgctggttttctcctcccat 947
>ref|NM_202666.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT3G47550) mRNA, complete cds Length = 1868 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 627 tggtgcaatgagaaaggagatgtgacatgtgaaatctgccatgagccgtatgaacatggg 686 ||||| ||||||||||| || | || |||||||| || || |||| ||| ||||||| Sbjct: 687 tggtgtaatgagaaaggcgacataacctgtgaaatatgtcaccagccttatcaacatgga 746 Query: 687 tacactgcacctcc 700 |||||||||||||| Sbjct: 747 tacactgcacctcc 760 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 978 cgtgctgctggttttcttctcccat 1002 ||||||||||||||||| ||||||| Sbjct: 1047 cgtgctgctggttttctcctcccat 1071
>ref|NM_202665.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT3G47550) mRNA, complete cds Length = 1945 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 627 tggtgcaatgagaaaggagatgtgacatgtgaaatctgccatgagccgtatgaacatggg 686 ||||| ||||||||||| || | || |||||||| || || |||| ||| ||||||| Sbjct: 687 tggtgtaatgagaaaggcgacataacctgtgaaatatgtcaccagccttatcaacatgga 746 Query: 687 tacactgcacctcc 700 |||||||||||||| Sbjct: 747 tacactgcacctcc 760 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 978 cgtgctgctggttttcttctcccat 1002 ||||||||||||||||| ||||||| Sbjct: 1117 cgtgctgctggttttctcctcccat 1141
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 gcccgcgggccccgcccccgtc 39 |||||||||||||||||||||| Sbjct: 183529 gcccgcgggccccgcccccgtc 183508
>gb|BC037247.1| Homo sapiens solute carrier family 22 (organic cation transporter), member 16, mRNA (cDNA clone IMAGE:5179269), partial cds Length = 1941 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 gcattccttttttgcagttgga 482 |||||||||||||||||||||| Sbjct: 753 gcattccttttttgcagttgga 774
>dbj|AK057306.1| Homo sapiens cDNA FLJ32744 fis, clone TESTI2001420, weakly similar to D.melanogaster mRNA for putative organic cation transporter Length = 1954 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 gcattccttttttgcagttgga 482 |||||||||||||||||||||| Sbjct: 489 gcattccttttttgcagttgga 510
>ref|NM_033125.2| Homo sapiens solute carrier family 22 (organic cation transporter), member 16 (SLC22A16), mRNA gb|BC047565.1| Homo sapiens solute carrier family 22 (organic cation transporter), member 16, mRNA (cDNA clone MGC:48287 IMAGE:4838011), complete cds Length = 1983 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 gcattccttttttgcagttgga 482 |||||||||||||||||||||| Sbjct: 805 gcattccttttttgcagttgga 826
>emb|AL445588.12| Human DNA sequence from clone RP11-522H16 on chromosome 13, complete sequence Length = 174591 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 940 atgatgacacttcagcaatgttttca 965 ||||||||| |||||||||||||||| Sbjct: 130722 atgatgacagttcagcaatgttttca 130747
>emb|AL078588.9|HSDJ784K2 Human DNA sequence from clone RP4-784K2 on chromosome 20 Contains an STS and GSSs, complete sequence Length = 62421 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1517 tgttgtttttacaagaaaaata 1538 |||||||||||||||||||||| Sbjct: 27344 tgttgtttttacaagaaaaata 27365
>gb|AF268892.1|AF268892 Homo sapiens organic cation transporter OKB1 mRNA, complete cds Length = 1734 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 gcattccttttttgcagttgga 482 |||||||||||||||||||||| Sbjct: 738 gcattccttttttgcagttgga 759
>emb|BX823484.1|CNS0A59W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS42ZG04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1002 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 627 tggtgcaatgagaaaggagatgtgacatgtgaaatctgccatgagccgtatgaacatggg 686 ||||| ||||||||||| || | || |||||||| || || |||| ||| ||||||| Sbjct: 195 tggtgtaatgagaaaggcgacataacctgtgaaatatgtcaccagccttatcaacatgga 254 Query: 687 tacactgcacctcc 700 |||||||||||||| Sbjct: 255 tacactgcacctcc 268 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 978 cgtgctgctggttttcttctcccat 1002 ||||||||||||||||| ||||||| Sbjct: 556 cgtgctgctggttttctcctcccat 580
>emb|BX841685.1|CNS09YJL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZD10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1098 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 984 gctggttttcttctcccattctatataatggcttgggcaattagtatatt 1033 ||||||||||| ||||| | || || ||||||||||| ||||||||||| Sbjct: 838 gctggttttctcctcccgtgttacatcatggcttgggctattagtatatt 887
>gb|AC002464.1|AC002464 Human BAC clone CTA-331P3, complete sequence Length = 123805 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 gcattccttttttgcagttgga 482 |||||||||||||||||||||| Sbjct: 113652 gcattccttttttgcagttgga 113673
>dbj|AB055798.1| Homo sapiens hCT2 mRNA for carnitine transporter 2, complete cds Length = 2048 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 gcattccttttttgcagttgga 482 |||||||||||||||||||||| Sbjct: 920 gcattccttttttgcagttgga 941
>gb|AY145502.1| Homo sapiens putative transmembrane transporter FLIPT 2 mRNA, complete cds Length = 1734 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 gcattccttttttgcagttgga 482 |||||||||||||||||||||| Sbjct: 738 gcattccttttttgcagttgga 759
>dbj|AK243523.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100075L24, full insert sequence Length = 2334 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 792 gcagtagcacaaaaccacatt 812 ||||||||||||||||||||| Sbjct: 1675 gcagtagcacaaaaccacatt 1695
>ref|XM_508699.2| PREDICTED: Pan troglodytes hypothetical LOC451487 (LOC451487), mRNA Length = 6214 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1383 ggccagggagtctcggtgagt 1403 ||||||||||||||||||||| Sbjct: 2448 ggccagggagtctcggtgagt 2428
>ref|XM_001169527.1| PREDICTED: Pan troglodytes VprBP protein, transcript variant 1 (VPRBP), mRNA Length = 8397 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 3045 tgatgaagatgatgatgacac 3065
>ref|XM_526203.2| PREDICTED: Pan troglodytes VprBP protein, transcript variant 5 (VPRBP), mRNA Length = 9689 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 4337 tgatgaagatgatgatgacac 4357
>ref|XM_001169605.1| PREDICTED: Pan troglodytes VprBP protein, transcript variant 4 (VPRBP), mRNA Length = 9732 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 4380 tgatgaagatgatgatgacac 4400
>ref|XM_001169562.1| PREDICTED: Pan troglodytes VprBP protein, transcript variant 3 (VPRBP), mRNA Length = 9722 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 4370 tgatgaagatgatgatgacac 4390
>ref|XM_001169544.1| PREDICTED: Pan troglodytes VprBP protein, transcript variant 2 (VPRBP), mRNA Length = 9740 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 4388 tgatgaagatgatgatgacac 4408
>ref|XM_936724.2| PREDICTED: Homo sapiens hephaestin-like 1 (HEPHL1), mRNA Length = 6181 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1383 ggccagggagtctcggtgagt 1403 ||||||||||||||||||||| Sbjct: 2418 ggccagggagtctcggtgagt 2398
>ref|XM_291947.7| PREDICTED: Homo sapiens hephaestin-like 1 (HEPHL1), mRNA Length = 6181 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1383 ggccagggagtctcggtgagt 1403 ||||||||||||||||||||| Sbjct: 2418 ggccagggagtctcggtgagt 2398
>gb|DQ832259.1| Sus scrofa breed Rongchang interleukin-6 protein mRNA, complete cds Length = 741 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 630 tgcaatgagaaaggagatgtg 650 ||||||||||||||||||||| Sbjct: 240 tgcaatgagaaaggagatgtg 260
>gb|CP000383.1| Cytophaga hutchinsonii ATCC 33406, complete genome Length = 4433218 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 agttcttttgttcaaaaattt 327 ||||||||||||||||||||| Sbjct: 3308816 agttcttttgttcaaaaattt 3308796
>ref|XM_001086917.1| PREDICTED: Macaca mulatta similar to hephaestin isoform 1 (LOC698404), mRNA Length = 5898 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1383 ggccagggagtctcggtgagt 1403 ||||||||||||||||||||| Sbjct: 2160 ggccagggagtctcggtgagt 2140
>ref|XM_988149.1| PREDICTED: Mus musculus similar to SMAD specific E3 ubiquitin protein ligase 2 (LOC671633), mRNA Length = 615 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 cccgcccgcgggccccgcccccgtc 39 ||||||||| ||||||||||||||| Sbjct: 172 cccgcccgccggccccgcccccgtc 196
>gb|DQ214534.1| Taeniopygia guttata clone 0058P0040D05 fetal globin-inducing factor variant 1-like mRNA, complete sequence Length = 1308 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 928 ctgatgaagatgatgatgaca 948 ||||||||||||||||||||| Sbjct: 105 ctgatgaagatgatgatgaca 125
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 792 gcagtagcacaaaaccacatt 812 ||||||||||||||||||||| Sbjct: 72727 gcagtagcacaaaaccacatt 72707
>gb|AC121517.7| Mus musculus chromosome 15, clone RP23-120A12, complete sequence Length = 222681 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 attgacactaagatttattta 259 ||||||||||||||||||||| Sbjct: 12003 attgacactaagatttattta 12023
>gb|AC100378.10| Mus musculus chromosome 10, clone RP23-130O4, complete sequence Length = 218363 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1278 ccagtgcagagccatgttatt 1298 ||||||||||||||||||||| Sbjct: 46487 ccagtgcagagccatgttatt 46507
>gb|AE009151.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 177 of 256 of the complete sequence Length = 10009 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 857 tgctgccttttgccgttctgc 877 ||||||||||||||||||||| Sbjct: 1061 tgctgccttttgccgttctgc 1081
>gb|AC129012.4| Mus musculus BAC clone RP24-545L10 from chromosome 10, complete sequence Length = 143029 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1278 ccagtgcagagccatgttatt 1298 ||||||||||||||||||||| Sbjct: 19808 ccagtgcagagccatgttatt 19788
>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence Length = 214124 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 636 gagaaaggagatgtgacatgt 656 ||||||||||||||||||||| Sbjct: 183867 gagaaaggagatgtgacatgt 183847
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 857 tgctgccttttgccgttctgc 877 ||||||||||||||||||||| Sbjct: 1953132 tgctgccttttgccgttctgc 1953152
>gb|BC039504.2| Homo sapiens cDNA clone IMAGE:5561426, partial cds Length = 1125 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 931 atgaagatgatgatgacactt 951 ||||||||||||||||||||| Sbjct: 832 atgaagatgatgatgacactt 812
>dbj|AK023239.1| Homo sapiens cDNA FLJ13177 fis, clone NT2RP3003870, highly similar to Homo sapiens mRNA for KIAA0800 protein Length = 2876 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 2222 tgatgaagatgatgatgacac 2242
>gb|AY038877.1|AY038861S16 Mus musculus protein tyrosine phosphatase receptor-like protein J (Ptprj) gene, exons 2 through 24 and complete cds Length = 70607 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 tggagacagcatggttcctga 499 ||||||||||||||||||||| Sbjct: 67613 tggagacagcatggttcctga 67593
>gb|AC105179.6| Homo sapiens chromosome 11, clone RP11-124M12, complete sequence Length = 171683 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 cttaaaaagagttcttttgtt 318 ||||||||||||||||||||| Sbjct: 93810 cttaaaaagagttcttttgtt 93830
>gb|AF493992.1| Sus scrofa interleukin-6 precursor, mRNA, complete cds Length = 675 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 630 tgcaatgagaaaggagatgtg 650 ||||||||||||||||||||| Sbjct: 195 tgcaatgagaaaggagatgtg 215
>gb|AC027118.9| Homo sapiens chromosome 10 clone RP11-573I11, complete sequence Length = 170255 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 931 atgaagatgatgatgacactt 951 ||||||||||||||||||||| Sbjct: 149715 atgaagatgatgatgacactt 149735
>emb|AL158048.35| Human DNA sequence from clone RP5-963K15 on chromosome 1p36.21-36.33 Contains the SLC2A5 gene for solute carrier family 2 (facilitated glucose/fructose transporter) member 5, two novel genes and two CpG islands, complete sequence Length = 139111 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1100 gtctgggcaagggagaggagtgcat 1124 ||||||| ||||||||||||||||| Sbjct: 54152 gtctggggaagggagaggagtgcat 54128
>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2 Length = 101154 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 978 cgtgctgctggttttcttctcccat 1002 ||||||||||||||||| ||||||| Sbjct: 38325 cgtgctgctggttttctcctcccat 38349
>gb|AC109617.11| Mus musculus chromosome 15, clone RP24-360D1, complete sequence Length = 189763 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 attgacactaagatttattta 259 ||||||||||||||||||||| Sbjct: 155884 attgacactaagatttattta 155904
>gb|DQ000491.1| Mus musculus brain glucose regulatory protein (Grp58) gene, complete cds Length = 29700 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 cattacagggcattccttttt 472 ||||||||||||||||||||| Sbjct: 12384 cattacagggcattccttttt 12364
>gb|AC113303.16| Mus musculus chromosome 5, clone RP23-431E5, complete sequence Length = 221109 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 636 gagaaaggagatgtgacatgt 656 ||||||||||||||||||||| Sbjct: 220297 gagaaaggagatgtgacatgt 220317
>emb|AL080145.1|HSM800657 Homo sapiens mRNA; cDNA DKFZp434P113 (from clone DKFZp434P113) Length = 3935 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 3122 tgatgaagatgatgatgacac 3142
>gb|AF309651.1|AF309651 Sus scrofa interleukin 6 precursor (IL-6) mRNA, complete cds Length = 741 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 630 tgcaatgagaaaggagatgtg 650 ||||||||||||||||||||| Sbjct: 240 tgcaatgagaaaggagatgtg 260
>gb|AF061935.1|AF061935 Homo sapiens HIV-1 Vpr-binding protein (VprBP) mRNA, partial cds Length = 4207 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 3925 tgatgaagatgatgatgacac 3945
>dbj|AB194100.1| Sus scrofa IL-6 mRNA for interleukin 6, partial cds Length = 585 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 630 tgcaatgagaaaggagatgtg 650 ||||||||||||||||||||| Sbjct: 113 tgcaatgagaaaggagatgtg 133
>dbj|AK173949.1| Ciona intestinalis cDNA, clone:cicl002m06, full insert sequence Length = 1313 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1229 tgctggcttgcatgaatcaccaaag 1253 |||||| |||||||||||||||||| Sbjct: 561 tgctggattgcatgaatcaccaaag 585
>gb|AC092037.2| Homo sapiens chromosome 3 clone RP11-89F17, complete sequence Length = 168499 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 25244 tgatgaagatgatgatgacac 25224
>ref|NM_014703.1| Homo sapiens Vpr (HIV-1) binding protein (VPRBP), mRNA dbj|AB018343.1| Homo sapiens mRNA for KIAA0800 protein, partial cds Length = 5984 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 4410 tgatgaagatgatgatgacac 4430
>emb|BX664625.12| Zebrafish DNA sequence from clone DKEY-286J17 in linkage group 22, complete sequence Length = 142350 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 926 aactgatgaagatgatgatga 946 ||||||||||||||||||||| Sbjct: 115625 aactgatgaagatgatgatga 115605
>gb|BC022792.1| Homo sapiens Vpr (HIV-1) binding protein, mRNA (cDNA clone MGC:23092 IMAGE:4853730), complete cds Length = 4356 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 3094 tgatgaagatgatgatgacac 3114
>dbj|AB107656.1| Camelus bactrianus IL-6 mRNA for interleukin 6, complete cds Length = 730 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 630 tgcaatgagaaaggagatgtg 650 ||||||||||||||||||||| Sbjct: 233 tgcaatgagaaaggagatgtg 253
>dbj|AB107647.1| Lama glama IL-6 mRNA for interleukin 6, complete cds Length = 730 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 630 tgcaatgagaaaggagatgtg 650 ||||||||||||||||||||| Sbjct: 233 tgcaatgagaaaggagatgtg 253
>emb|AL845466.4| Mouse DNA sequence from clone RP23-433P19 on chromosome 2, complete sequence Length = 197839 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 cattacagggcattccttttt 472 ||||||||||||||||||||| Sbjct: 128424 cattacagggcattccttttt 128404
>ref|NM_214399.1| Sus scrofa interleukin-6 protein (IL6), mRNA gb|M86722.1|PIGPRO Sus scrofa prointerleukin 6 mRNA, complete cds Length = 1123 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 630 tgcaatgagaaaggagatgtg 650 ||||||||||||||||||||| Sbjct: 258 tgcaatgagaaaggagatgtg 278
>gb|M80258.1|PIGIL6A Sus scrofa interleukin 6 (IL-6) mRNA, complete cds Length = 1050 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 630 tgcaatgagaaaggagatgtg 650 ||||||||||||||||||||| Sbjct: 257 tgcaatgagaaaggagatgtg 277
>gb|BC110371.1| Homo sapiens Vpr (HIV-1) binding protein, mRNA (cDNA clone MGC:102804 IMAGE:5547856), complete cds Length = 5954 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 tgatgaagatgatgatgacac 949 ||||||||||||||||||||| Sbjct: 4367 tgatgaagatgatgatgacac 4387
>emb|AL593847.36| Mouse DNA sequence from clone RP23-170A23 on chromosome 11, complete sequence Length = 222315 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 cccgcccgcgggccccgcccccgtc 39 ||||||||| ||||||||||||||| Sbjct: 120257 cccgcccgccggccccgcccccgtc 120233
>dbj|AP003966.2| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2508F7, complete sequence Length = 97000 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1383 ggccagggagtctcggtgagt 1403 ||||||||||||||||||||| Sbjct: 7308 ggccagggagtctcggtgagt 7288 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 304,802,537 Number of extensions: 17272247 Number of successful extensions: 418809 Number of sequences better than 10.0: 127 Number of HSP's gapped: 418793 Number of HSP's successfully gapped: 176 Length of query: 1618 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1595 Effective length of database: 18,503,978,556 Effective search space: 29513845796820 Effective search space used: 29513845796820 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)