ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf43e10 |
|---|---|
| Clone Library Name | barley_pub |
>Q2EMV9:PAR14_MOUSE Poly [ADP-ribose] polymerase 14 - Mus musculus (Mouse)| Length = 1817 Score = 41.2 bits (95), Expect = 0.020 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%) Frame = +1 Query: 1351 YGIGTHLAPANCAQTCASYSDIDENGIMRMMLCRVIM-----GNVEVVLPGSKQFQPTNG 1515 YG GT+ A C +YS D NG M RV+ GN +++P S+ Q Sbjct: 1725 YGKGTYFAVKASYSACDTYSRPDTNGRKYMYYVRVLTGNYTNGNASLIVPPSRDPQNAAD 1784 Query: 1516 TFDSGVDDLQKPKHYIIWDANVHRHIYAEYAVLIK 1620 +D+ D+ + P ++++ N Y EY + + Sbjct: 1785 LYDTVTDNDKNPSIFVVFYDN---QTYPEYLITFR 1816
>P37528:PDXT_BACSU Glutamine amidotransferase subunit pdxT - Bacillus subtilis| Length = 196 Score = 37.7 bits (86), Expect = 0.22 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%) Frame = +1 Query: 934 GKSEAGECAGTLILTAAAESLSSDSVDAVLPHVNKANKILEQEQKKIGQRVDSAVRKLLL 1113 GK G CAG +IL A E SD+ PH+ N ++E+ G++VDS L + Sbjct: 72 GKPMFGTCAGLIIL--AKEIAGSDN-----PHLGLLNVVVERNS--FGRQVDSFEADLTI 122 Query: 1114 EGVGQPFSEEDIIGIY-RTPLVDQQGRARFNLFQKELEVTKMHRG 1245 +G+ +PF+ G++ R P + + G + +EV H G Sbjct: 123 KGLDEPFT-----GVFIRAPHILEAG--------ENVEVLSEHNG 154
>Q460N3:PAR15_HUMAN Poly [ADP-ribose] polymerase 15 - Homo sapiens (Human)| Length = 656 Score = 36.6 bits (83), Expect = 0.50 Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 5/96 (5%) Frame = +1 Query: 1351 YGIGTHLAPANCAQTCASYSDIDENGIMRMMLCRVI-----MGNVEVVLPGSKQFQPTNG 1515 YG GT+ A +YS D NG M + RV+ G +V P K Sbjct: 564 YGKGTYFAVDASYSAKDTYSKPDSNGRKHMYVVRVLTGVFTKGRAGLVTPPPKNPHNPTD 623 Query: 1516 TFDSGVDDLQKPKHYIIWDANVHRHIYAEYAVLIKA 1623 FDS ++ + PK ++++ N Y EY + A Sbjct: 624 LFDSVTNNTRSPKLFVVFFDN---QAYPEYLITFTA 656
>P46983:YJS5_YEAST Uncharacterized protein YJL185C - Saccharomyces cerevisiae (Baker's| yeast) Length = 293 Score = 35.8 bits (81), Expect = 0.85 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 4/102 (3%) Frame = +1 Query: 1621 APSMTNEYLAREDTASNVSEIRNSGSEESVIKDDSSESLA-SPADKQQAP--RFGRAPTR 1791 +P TN ++R++T + S S+E I SS+S SP +Q AP R R+ + Sbjct: 65 SPECTNTAISRDETLESASSAFEVPSDEIAILSISSDSNKNSPPSEQPAPALRNIRSSSN 124 Query: 1792 RPPTSPWMPLPMLFAAISTKVPRSDMDIIHGH-YEEFKRRKI 1914 W LF + VP+S + HG FK R++ Sbjct: 125 SDRIDEWCLGSHLFNELHQNVPQSSDGVNHGFPVYSFKEREL 166
>Q8CFF0:PAR11_MOUSE Poly [ADP-ribose] polymerase 11 - Mus musculus (Mouse)| Length = 331 Score = 35.4 bits (80), Expect = 1.1 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = +1 Query: 1429 IMRMMLCRVIMGNVEVVLPGSKQFQPTNGTFDSGVDDLQKPKHYIIWDANVHRHIYAEYA 1608 + R+++ I G+ + + P SK N +DS VDD PK ++++DAN IY EY Sbjct: 272 LARVLIGDYINGDSKYMRPPSKDGSYVN-LYDSCVDDTWNPKIFVVFDAN---QIYPEYL 327 Query: 1609 V 1611 + Sbjct: 328 I 328
>Q9NR21:PAR11_HUMAN Poly [ADP-ribose] polymerase 11 - Homo sapiens (Human)| Length = 331 Score = 35.4 bits (80), Expect = 1.1 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = +1 Query: 1429 IMRMMLCRVIMGNVEVVLPGSKQFQPTNGTFDSGVDDLQKPKHYIIWDANVHRHIYAEYA 1608 + R+++ I G+ + + P SK N +DS VDD PK ++++DAN IY EY Sbjct: 272 LARVLIGDYINGDSKYMRPPSKDGSYVN-LYDSCVDDTWNPKIFVVFDAN---QIYPEYL 327 Query: 1609 V 1611 + Sbjct: 328 I 328
>Q2J6Q9:GLGB_FRASC 1,4-alpha-glucan-branching enzyme - Frankia sp. (strain CcI3)| Length = 812 Score = 35.0 bits (79), Expect = 1.4 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 1/135 (0%) Frame = +1 Query: 1651 REDTASNVSEIRNSGSEESVIKDDSSESLASPADKQQAPRFGRAPTRRPPTSPWMPLPML 1830 R + + +RN G ++ D+S + A P P AP PP++ P + Sbjct: 24 RPNPRGAATAVRNGGGRVALADRDASSASAQPGQTADDPAVPSAPPSAPPSALPADPPAV 83 Query: 1831 FAAISTKVPRSDMD-IIHGHYEEFKRRKISRPDFVRRLRQIVGDKLLVSTVVRLQPKEVP 2007 A+S +P D++ ++ G + + P + G V V+R + V Sbjct: 84 APAVSVDLPYDDLERLVSGAHHD--------PHALLGAHPHPGSDATVVRVLRPDARAVT 135 Query: 2008 PMAGAELLPRRAPGT 2052 + G P R P T Sbjct: 136 VLVG----PARYPAT 146
>O75161:NPHP4_HUMAN Nephrocystin-4 - Homo sapiens (Human)| Length = 1426 Score = 34.3 bits (77), Expect = 2.5 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Frame = +1 Query: 1723 SSESLASPADKQQAPRFGRAPTRRPPTSPW---MPLPMLFAA 1839 S E L +P + P+ R P+R+PPTSP P+P + AA Sbjct: 451 SEEHLDAPTEPVSGPKVERRPSRKPPTSPSSPPAPVPRVLAA 492
>O86781:GLMS_STRCO Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] -| Streptomyces coelicolor Length = 615 Score = 33.9 bits (76), Expect = 3.2 Identities = 22/86 (25%), Positives = 37/86 (43%) Frame = +1 Query: 1591 IYAEYAVLIKAPSMTNEYLAREDTASNVSEIRNSGSEESVIKDDSSESLASPADKQQAPR 1770 I + V++ PS + + SN+ EIR G+ VI ++ E++ AD R Sbjct: 513 IEEDLPVVVVVPSPRGRSVLHDKIVSNIQEIRARGARTIVIAEEGDEAVVPYAD--HLVR 570 Query: 1771 FGRAPTRRPPTSPWMPLPMLFAAIST 1848 PT P +PL + ++T Sbjct: 571 IPATPTLLQPLVATVPLQVFACELAT 596
>Q12947:FOXF2_HUMAN Forkhead box protein F2 - Homo sapiens (Human)| Length = 444 Score = 33.5 bits (75), Expect = 4.2 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = -2 Query: 2072 LWRCCSPVPGALLGS--SSAPAMGGTSLGCSLTTVETSSLSPTICLSRLTKS 1923 L R CSPVPGAL + S PA + TT +SS S C S + S Sbjct: 12 LRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSS 63
>Q9AC25:IF2_CAUCR Translation initiation factor IF-2 - Caulobacter crescentus| (Caulobacter vibrioides) Length = 1009 Score = 33.5 bits (75), Expect = 4.2 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 12/85 (14%) Frame = +1 Query: 1648 AREDTASNVSE----------IRNSGSEESVIKDDSSESLASPADKQQAPRFGR--APTR 1791 ARE A V+E + + E+ K + + A+P QAP AP Sbjct: 106 AREAQARQVAEQAAAEARARAAQEAAQREAAAKAAAERAAAAPPPVAQAPAAPAPAAPVT 165 Query: 1792 RPPTSPWMPLPMLFAAISTKVPRSD 1866 PP +P P P+ A ++ PR D Sbjct: 166 PPPAAPQAPRPVAQAPVAPSAPRQD 190
>P35413:GPR3_MOUSE Probable G-protein coupled receptor 3 - Mus musculus (Mouse)| Length = 330 Score = 33.1 bits (74), Expect = 5.5 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = -2 Query: 1526 LSNVPLVGWNCFDPGSTTS--TFPIITRHSIILMMPFSSISE*LAQVWAQFAGARC 1365 L VP++ WNC D G TT +P+ H ++L + F + + Q++AQ C Sbjct: 167 LGLVPVLAWNCRD-GLTTCGVVYPLSKNHLVVLAIAFFMVFGIMLQLYAQICRIVC 221
>P46089:GPR3_HUMAN Probable G-protein coupled receptor 3 - Homo sapiens (Human)| Length = 330 Score = 33.1 bits (74), Expect = 5.5 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = -2 Query: 1526 LSNVPLVGWNCFDPGSTTS--TFPIITRHSIILMMPFSSISE*LAQVWAQFAGARC 1365 L +P++ WNC D G TT +P+ H ++L + F + + Q++AQ C Sbjct: 167 LGLLPVLAWNCLD-GLTTCGVVYPLSKNHLVVLAIAFFMVFGIMLQLYAQICRIVC 221
>Q8BZ60:STON2_MOUSE Stonin-2 - Mus musculus (Mouse)| Length = 895 Score = 32.7 bits (73), Expect = 7.2 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +1 Query: 1666 SNVSEIRNSGSEESVIKDDSSESLASPADKQQAPRFGR-APTRRPPTSPWMPLPMLFAAI 1842 S+ SE S S E+ + D+ S+ L+ + + G + PP SP P P L +AI Sbjct: 40 SSSSERSESSSGENHVVDEGSQDLSHSEQDDSSEKMGLISEAASPPGSPVQPTPDLASAI 99 Query: 1843 STKVPRSD 1866 S V D Sbjct: 100 SNWVQFED 107
>Q5QWB4:EFG_IDILO Elongation factor G - Idiomarina loihiensis| Length = 707 Score = 32.7 bits (73), Expect = 7.2 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Frame = +1 Query: 613 LEWYKNFKTSGLPVR---VLCYHQGKWKDFPEHVVNLVQQDFQLKRPITNAVFKNQQVLL 783 ++W + + G+ + C+ QG K FPEH VN++ + T V ++ +VL Sbjct: 50 MDWMEQEQERGITITSAATTCFWQGMDKQFPEHRVNIIDTPGHV--DFTIEVERSLRVLD 107 Query: 784 DFMHMVCIDSAVTTNKPIAW 843 + ++C S V W Sbjct: 108 GAVVVLCASSGVQPQTETVW 127
>Q96301:SPY_ARATH Probable UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase SPINDLY - Arabidopsis thaliana (Mouse-ear cress) Length = 914 Score = 32.3 bits (72), Expect = 9.4 Identities = 19/46 (41%), Positives = 22/46 (47%) Frame = -1 Query: 2010 GWHFLRLQPHYCRNQQLVTDNLS*PSHKIGPAYLSPLEFFIVSMDY 1873 GW F RL P Y DNL P I Y+SP +FF S+ Y Sbjct: 460 GWRFTRLHPQYTS-----WDNLKDPERPITIGYISP-DFFTHSVSY 499 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 439,315,436 Number of extensions: 10130140 Number of successful extensions: 27709 Number of sequences better than 10.0: 16 Number of HSP's gapped: 27672 Number of HSP's successfully gapped: 16 Length of query: 800 Length of database: 100,686,439 Length adjustment: 121 Effective length of query: 679 Effective length of database: 67,496,744 Effective search space: 45830289176 Effective search space used: 45830289176 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
