ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf43e10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001058475.1| Oryza sativa (japonica cultivar-group) Os03g0854800 (Os03g0854800) mRNA, partial cds Length = 2479 Score = 228 bits (115), Expect = 7e-56 Identities = 292/351 (83%) Strand = Plus / Plus Query: 1289 ctatggaggagatgatgttgcgtggtgttctggaagttacaaaaccaatgctggggccaa 1348 ||||||||||||||||| || ||||| | ||||| | ||||||| ||| ||| |||| Sbjct: 1442 ctatggaggagatgatgatgaatggtgctttggaaatagcaaaacctctgcagggtccaa 1501 Query: 1349 tgtatggcattggcacacatcttgctccagcgaactgcgcccaaacctgtgccagctact 1408 ||||||| |||| | |||||||||||||| |||| | || | | ||||| | | | Sbjct: 1502 tgtatggtgttggggctcatcttgctccagcaaactcctccaatatctgtgttggtttat 1561 Query: 1409 cagatattgacgaaaatggcatcatgaggatgatgctgtgccgtgttataatggggaatg 1468 | ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 1562 ctgatattgacgaaaatggaatcataaggatgatgttgtgccgtgttataatggggaatg 1621 Query: 1469 ttgaggttgtacttcctggatcaaagcaattccagccaaccaatggaacatttgatagtg 1528 ||||||| || | ||||||||||| |||| ||||||||||| || || ||||| |||| Sbjct: 1622 ttgaggtggttttccctggatcaaatcaatgccagccaaccagtgaaagttttgacagtg 1681 Query: 1529 gcgtggatgatcttcaaaagccaaagcactatatcatatgggatgctaatgtacatcgac 1588 | ||||||||||| |||| ||||||||| || |||||||||||||||||||| ||| | Sbjct: 1682 gtgtggatgatctccaaaggccaaagcattacatcatatgggatgctaatgtgcataagc 1741 Query: 1589 atatctatgctgaatatgctgttcttatcaaagcaccttccatgaccaatg 1639 | || |||||||||||||||||| ||||||||| ||||| ||||| ||||| Sbjct: 1742 acatttatgctgaatatgctgttattatcaaagtaccttacatgaacaatg 1792 Score = 147 bits (74), Expect = 2e-31 Identities = 179/214 (83%) Strand = Plus / Plus Query: 1772 ttgggcgtgctccaactcgaaggcctcctacttcaccctggatgcccctcccaatgcttt 1831 ||||||||||||||| || |||| |||||| |||||| ||||||||| | ||||||||| Sbjct: 1910 ttgggcgtgctccaagtccaaggtctcctagttcaccttggatgcccttttcaatgcttt 1969 Query: 1832 ttgctgccatctccacaaaagttcctcgttctgacatggacataatccatggacactatg 1891 ||||||| || ||| | ||||| || ||||| |||||||| | | ||| | | |||| Sbjct: 1970 ttgctgctatttccgctaaagtaccccgttcggacatggatctggtgcataaatattatg 2029 Query: 1892 aagaattcaagaggagaaagataagcaggcccgattttgtgagacggctaagacagattg 1951 ||||||||||||||||||||||||||||||| || | |||| | ||| |||||||||| Sbjct: 2030 aagaattcaagaggagaaagataagcaggcctgacctagtgaagcagctgagacagattg 2089 Query: 1952 tcggtgacaagctgctggtttctacagtagtgag 1985 | ||||||||||| ||||||||||||||||||| Sbjct: 2090 ttggtgacaagcttttggtttctacagtagtgag 2123 Score = 123 bits (62), Expect = 3e-24 Identities = 179/218 (82%) Strand = Plus / Plus Query: 688 gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 747 ||||| |||||| | ||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 809 gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 868 Query: 748 actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 807 |||| ||| |||||| ||||| ||| | ||||||||||| ||||| ||||| || | Sbjct: 869 actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 928 Query: 808 gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 867 ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| ||||| Sbjct: 929 gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 988 Query: 868 tttccagatttatgtgctggactgataacatctaaacc 905 | ||| |||| |||||||||| | ||| ||||| |||| Sbjct: 989 tctccggattcatgtgctggagtaataccatctgaacc 1026 Score = 48.1 bits (24), Expect = 0.15 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1656 agatactgcatccaacgtatctgagatacgaaattctggt 1695 ||||||||||||||| | ||||||||| ||||||||||| Sbjct: 1794 agatactgcatccaatatctctgagataagaaattctggt 1833 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 370 acttagtggtgtaaatctgtaaagaaagtcaatacttagttttagttgag 419 |||||||||||| | |||||||||||| | ||||| ||| ||||||||| Sbjct: 461 acttagtggtgttagtctgtaaagaaaatgaatacccagtcttagttgag 510
>dbj|AK072499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E22, full insert sequence Length = 3913 Score = 228 bits (115), Expect = 7e-56 Identities = 292/351 (83%) Strand = Plus / Plus Query: 1289 ctatggaggagatgatgttgcgtggtgttctggaagttacaaaaccaatgctggggccaa 1348 ||||||||||||||||| || ||||| | ||||| | ||||||| ||| ||| |||| Sbjct: 2876 ctatggaggagatgatgatgaatggtgctttggaaatagcaaaacctctgcagggtccaa 2935 Query: 1349 tgtatggcattggcacacatcttgctccagcgaactgcgcccaaacctgtgccagctact 1408 ||||||| |||| | |||||||||||||| |||| | || | | ||||| | | | Sbjct: 2936 tgtatggtgttggggctcatcttgctccagcaaactcctccaatatctgtgttggtttat 2995 Query: 1409 cagatattgacgaaaatggcatcatgaggatgatgctgtgccgtgttataatggggaatg 1468 | ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 2996 ctgatattgacgaaaatggaatcataaggatgatgttgtgccgtgttataatggggaatg 3055 Query: 1469 ttgaggttgtacttcctggatcaaagcaattccagccaaccaatggaacatttgatagtg 1528 ||||||| || | ||||||||||| |||| ||||||||||| || || ||||| |||| Sbjct: 3056 ttgaggtggttttccctggatcaaatcaatgccagccaaccagtgaaagttttgacagtg 3115 Query: 1529 gcgtggatgatcttcaaaagccaaagcactatatcatatgggatgctaatgtacatcgac 1588 | ||||||||||| |||| ||||||||| || |||||||||||||||||||| ||| | Sbjct: 3116 gtgtggatgatctccaaaggccaaagcattacatcatatgggatgctaatgtgcataagc 3175 Query: 1589 atatctatgctgaatatgctgttcttatcaaagcaccttccatgaccaatg 1639 | || |||||||||||||||||| ||||||||| ||||| ||||| ||||| Sbjct: 3176 acatttatgctgaatatgctgttattatcaaagtaccttacatgaacaatg 3226 Score = 147 bits (74), Expect = 2e-31 Identities = 179/214 (83%) Strand = Plus / Plus Query: 1772 ttgggcgtgctccaactcgaaggcctcctacttcaccctggatgcccctcccaatgcttt 1831 ||||||||||||||| || |||| |||||| |||||| ||||||||| | ||||||||| Sbjct: 3344 ttgggcgtgctccaagtccaaggtctcctagttcaccttggatgcccttttcaatgcttt 3403 Query: 1832 ttgctgccatctccacaaaagttcctcgttctgacatggacataatccatggacactatg 1891 ||||||| || ||| | ||||| || ||||| |||||||| | | ||| | | |||| Sbjct: 3404 ttgctgctatttccgctaaagtaccccgttcggacatggatctggtgcataaatattatg 3463 Query: 1892 aagaattcaagaggagaaagataagcaggcccgattttgtgagacggctaagacagattg 1951 ||||||||||||||||||||||||||||||| || | |||| | ||| |||||||||| Sbjct: 3464 aagaattcaagaggagaaagataagcaggcctgacctagtgaagcagctgagacagattg 3523 Query: 1952 tcggtgacaagctgctggtttctacagtagtgag 1985 | ||||||||||| ||||||||||||||||||| Sbjct: 3524 ttggtgacaagcttttggtttctacagtagtgag 3557 Score = 123 bits (62), Expect = 3e-24 Identities = 179/218 (82%) Strand = Plus / Plus Query: 688 gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 747 ||||| |||||| | ||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2164 gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 2223 Query: 748 actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 807 |||| ||| |||||| ||||| ||| | ||||||||||| ||||| ||||| || | Sbjct: 2224 actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 2283 Query: 808 gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 867 ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| ||||| Sbjct: 2284 gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 2343 Query: 868 tttccagatttatgtgctggactgataacatctaaacc 905 | ||| |||| |||||||||| | ||| ||||| |||| Sbjct: 2344 tctccggattcatgtgctggagtaataccatctgaacc 2381 Score = 48.1 bits (24), Expect = 0.15 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1656 agatactgcatccaacgtatctgagatacgaaattctggt 1695 ||||||||||||||| | ||||||||| ||||||||||| Sbjct: 3228 agatactgcatccaatatctctgagataagaaattctggt 3267 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 370 acttagtggtgtaaatctgtaaagaaagtcaatacttagttttagttgag 419 |||||||||||| | |||||||||||| | ||||| ||| ||||||||| Sbjct: 1816 acttagtggtgttagtctgtaaagaaaatgaatacccagtcttagttgag 1865
>dbj|AK060748.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F11, full insert sequence Length = 2479 Score = 228 bits (115), Expect = 7e-56 Identities = 292/351 (83%) Strand = Plus / Plus Query: 1289 ctatggaggagatgatgttgcgtggtgttctggaagttacaaaaccaatgctggggccaa 1348 ||||||||||||||||| || ||||| | ||||| | ||||||| ||| ||| |||| Sbjct: 1442 ctatggaggagatgatgatgaatggtgctttggaaatagcaaaacctctgcagggtccaa 1501 Query: 1349 tgtatggcattggcacacatcttgctccagcgaactgcgcccaaacctgtgccagctact 1408 ||||||| |||| | |||||||||||||| |||| | || | | ||||| | | | Sbjct: 1502 tgtatggtgttggggctcatcttgctccagcaaactcctccaatatctgtgttggtttat 1561 Query: 1409 cagatattgacgaaaatggcatcatgaggatgatgctgtgccgtgttataatggggaatg 1468 | ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 1562 ctgatattgacgaaaatggaatcataaggatgatgttgtgccgtgttataatggggaatg 1621 Query: 1469 ttgaggttgtacttcctggatcaaagcaattccagccaaccaatggaacatttgatagtg 1528 ||||||| || | ||||||||||| |||| ||||||||||| || || ||||| |||| Sbjct: 1622 ttgaggtggttttccctggatcaaatcaatgccagccaaccagtgaaagttttgacagtg 1681 Query: 1529 gcgtggatgatcttcaaaagccaaagcactatatcatatgggatgctaatgtacatcgac 1588 | ||||||||||| |||| ||||||||| || |||||||||||||||||||| ||| | Sbjct: 1682 gtgtggatgatctccaaaggccaaagcattacatcatatgggatgctaatgtgcataagc 1741 Query: 1589 atatctatgctgaatatgctgttcttatcaaagcaccttccatgaccaatg 1639 | || |||||||||||||||||| ||||||||| ||||| ||||| ||||| Sbjct: 1742 acatttatgctgaatatgctgttattatcaaagtaccttacatgaacaatg 1792 Score = 147 bits (74), Expect = 2e-31 Identities = 179/214 (83%) Strand = Plus / Plus Query: 1772 ttgggcgtgctccaactcgaaggcctcctacttcaccctggatgcccctcccaatgcttt 1831 ||||||||||||||| || |||| |||||| |||||| ||||||||| | ||||||||| Sbjct: 1910 ttgggcgtgctccaagtccaaggtctcctagttcaccttggatgcccttttcaatgcttt 1969 Query: 1832 ttgctgccatctccacaaaagttcctcgttctgacatggacataatccatggacactatg 1891 ||||||| || ||| | ||||| || ||||| |||||||| | | ||| | | |||| Sbjct: 1970 ttgctgctatttccgctaaagtaccccgttcggacatggatctggtgcataaatattatg 2029 Query: 1892 aagaattcaagaggagaaagataagcaggcccgattttgtgagacggctaagacagattg 1951 ||||||||||||||||||||||||||||||| || | |||| | ||| |||||||||| Sbjct: 2030 aagaattcaagaggagaaagataagcaggcctgacctagtgaagcagctgagacagattg 2089 Query: 1952 tcggtgacaagctgctggtttctacagtagtgag 1985 | ||||||||||| ||||||||||||||||||| Sbjct: 2090 ttggtgacaagcttttggtttctacagtagtgag 2123 Score = 123 bits (62), Expect = 3e-24 Identities = 179/218 (82%) Strand = Plus / Plus Query: 688 gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 747 ||||| |||||| | ||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 809 gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 868 Query: 748 actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 807 |||| ||| |||||| ||||| ||| | ||||||||||| ||||| ||||| || | Sbjct: 869 actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 928 Query: 808 gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 867 ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| ||||| Sbjct: 929 gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 988 Query: 868 tttccagatttatgtgctggactgataacatctaaacc 905 | ||| |||| |||||||||| | ||| ||||| |||| Sbjct: 989 tctccggattcatgtgctggagtaataccatctgaacc 1026 Score = 48.1 bits (24), Expect = 0.15 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1656 agatactgcatccaacgtatctgagatacgaaattctggt 1695 ||||||||||||||| | ||||||||| ||||||||||| Sbjct: 1794 agatactgcatccaatatctctgagataagaaattctggt 1833 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 370 acttagtggtgtaaatctgtaaagaaagtcaatacttagttttagttgag 419 |||||||||||| | |||||||||||| | ||||| ||| ||||||||| Sbjct: 461 acttagtggtgttagtctgtaaagaaaatgaatacccagtcttagttgag 510
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 224 bits (113), Expect = 1e-54 Identities = 200/229 (87%) Strand = Plus / Minus Query: 1411 gatattgacgaaaatggcatcatgaggatgatgctgtgccgtgttataatggggaatgtt 1470 ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 97996 gatattgacgaaaatggaatcataaggatgatgttgtgccgtgttataatggggaatgtt 97937 Query: 1471 gaggttgtacttcctggatcaaagcaattccagccaaccaatggaacatttgatagtggc 1530 ||||| || | ||||||||||| |||| ||||||||||| || || ||||| ||||| Sbjct: 97936 gaggtggttttccctggatcaaatcaatgccagccaaccagtgaaagttttgacagtggt 97877 Query: 1531 gtggatgatcttcaaaagccaaagcactatatcatatgggatgctaatgtacatcgacat 1590 ||||||||||| |||| ||||||||| || |||||||||||||||||||| ||| || Sbjct: 97876 gtggatgatctccaaaggccaaagcattacatcatatgggatgctaatgtgcataagcac 97817 Query: 1591 atctatgctgaatatgctgttcttatcaaagcaccttccatgaccaatg 1639 || |||||||||||||||||| ||||||||| ||||| ||||| ||||| Sbjct: 97816 atttatgctgaatatgctgttattatcaaagtaccttacatgaacaatg 97768 Score = 123 bits (62), Expect = 3e-24 Identities = 179/218 (82%) Strand = Plus / Minus Query: 688 gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 747 ||||| |||||| | ||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 98943 gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 98884 Query: 748 actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 807 |||| ||| |||||| ||||| ||| | ||||||||||| ||||| ||||| || | Sbjct: 98883 actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 98824 Query: 808 gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 867 ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| ||||| Sbjct: 98823 gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 98764 Query: 868 tttccagatttatgtgctggactgataacatctaaacc 905 | ||| |||| |||||||||| | ||| ||||| |||| Sbjct: 98763 tctccggattcatgtgctggagtaataccatctgaacc 98726 Score = 81.8 bits (41), Expect = 1e-11 Identities = 74/85 (87%) Strand = Plus / Minus Query: 1901 agaggagaaagataagcaggcccgattttgtgagacggctaagacagattgtcggtgaca 1960 |||||||||||||||||||||| || | |||| | ||| ||||||||||| ||||||| Sbjct: 96578 agaggagaaagataagcaggcctgacctagtgaagcagctgagacagattgttggtgaca 96519 Query: 1961 agctgctggtttctacagtagtgag 1985 |||| ||||||||||||||||||| Sbjct: 96518 agcttttggtttctacagtagtgag 96494 Score = 79.8 bits (40), Expect = 4e-11 Identities = 85/100 (85%) Strand = Plus / Minus Query: 1772 ttgggcgtgctccaactcgaaggcctcctacttcaccctggatgcccctcccaatgcttt 1831 ||||||||||||||| || |||| |||||| |||||| ||||||||| | ||||||||| Sbjct: 96798 ttgggcgtgctccaagtccaaggtctcctagttcaccttggatgcccttttcaatgcttt 96739 Query: 1832 ttgctgccatctccacaaaagttcctcgttctgacatgga 1871 ||||||| || ||| | ||||| || ||||| |||||||| Sbjct: 96738 ttgctgctatttccgctaaagtaccccgttcggacatgga 96699 Score = 48.1 bits (24), Expect = 0.15 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1656 agatactgcatccaacgtatctgagatacgaaattctggt 1695 ||||||||||||||| | ||||||||| ||||||||||| Sbjct: 97663 agatactgcatccaatatctctgagataagaaattctggt 97624 Score = 48.1 bits (24), Expect = 0.15 Identities = 78/96 (81%) Strand = Plus / Minus Query: 1289 ctatggaggagatgatgttgcgtggtgttctggaagttacaaaaccaatgctggggccaa 1348 ||||||||||||||||| || ||||| | ||||| | ||||||| ||| ||| |||| Sbjct: 98231 ctatggaggagatgatgatgaatggtgctttggaaatagcaaaacctctgcagggtccaa 98172 Query: 1349 tgtatggcattggcacacatcttgctccagcgaact 1384 ||||||| |||| | |||||||||||||| |||| Sbjct: 98171 tgtatggtgttggggctcatcttgctccagcaaact 98136 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Minus Query: 370 acttagtggtgtaaatctgtaaagaaagtcaatacttagttttagttgag 419 |||||||||||| | |||||||||||| | ||||| ||| ||||||||| Sbjct: 99291 acttagtggtgttagtctgtaaagaaaatgaatacccagtcttagttgag 99242
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 224 bits (113), Expect = 1e-54 Identities = 200/229 (87%) Strand = Plus / Minus Query: 1411 gatattgacgaaaatggcatcatgaggatgatgctgtgccgtgttataatggggaatgtt 1470 ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 35790291 gatattgacgaaaatggaatcataaggatgatgttgtgccgtgttataatggggaatgtt 35790232 Query: 1471 gaggttgtacttcctggatcaaagcaattccagccaaccaatggaacatttgatagtggc 1530 ||||| || | ||||||||||| |||| ||||||||||| || || ||||| ||||| Sbjct: 35790231 gaggtggttttccctggatcaaatcaatgccagccaaccagtgaaagttttgacagtggt 35790172 Query: 1531 gtggatgatcttcaaaagccaaagcactatatcatatgggatgctaatgtacatcgacat 1590 ||||||||||| |||| ||||||||| || |||||||||||||||||||| ||| || Sbjct: 35790171 gtggatgatctccaaaggccaaagcattacatcatatgggatgctaatgtgcataagcac 35790112 Query: 1591 atctatgctgaatatgctgttcttatcaaagcaccttccatgaccaatg 1639 || |||||||||||||||||| ||||||||| ||||| ||||| ||||| Sbjct: 35790111 atttatgctgaatatgctgttattatcaaagtaccttacatgaacaatg 35790063 Score = 123 bits (62), Expect = 3e-24 Identities = 179/218 (82%) Strand = Plus / Minus Query: 688 gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 747 ||||| |||||| | ||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 35791238 gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 35791179 Query: 748 actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 807 |||| ||| |||||| ||||| ||| | ||||||||||| ||||| ||||| || | Sbjct: 35791178 actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 35791119 Query: 808 gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 867 ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| ||||| Sbjct: 35791118 gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 35791059 Query: 868 tttccagatttatgtgctggactgataacatctaaacc 905 | ||| |||| |||||||||| | ||| ||||| |||| Sbjct: 35791058 tctccggattcatgtgctggagtaataccatctgaacc 35791021 Score = 81.8 bits (41), Expect = 1e-11 Identities = 74/85 (87%) Strand = Plus / Minus Query: 1901 agaggagaaagataagcaggcccgattttgtgagacggctaagacagattgtcggtgaca 1960 |||||||||||||||||||||| || | |||| | ||| ||||||||||| ||||||| Sbjct: 35788873 agaggagaaagataagcaggcctgacctagtgaagcagctgagacagattgttggtgaca 35788814 Query: 1961 agctgctggtttctacagtagtgag 1985 |||| ||||||||||||||||||| Sbjct: 35788813 agcttttggtttctacagtagtgag 35788789 Score = 79.8 bits (40), Expect = 4e-11 Identities = 85/100 (85%) Strand = Plus / Minus Query: 1772 ttgggcgtgctccaactcgaaggcctcctacttcaccctggatgcccctcccaatgcttt 1831 ||||||||||||||| || |||| |||||| |||||| ||||||||| | ||||||||| Sbjct: 35789093 ttgggcgtgctccaagtccaaggtctcctagttcaccttggatgcccttttcaatgcttt 35789034 Query: 1832 ttgctgccatctccacaaaagttcctcgttctgacatgga 1871 ||||||| || ||| | ||||| || ||||| |||||||| Sbjct: 35789033 ttgctgctatttccgctaaagtaccccgttcggacatgga 35788994 Score = 48.1 bits (24), Expect = 0.15 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1656 agatactgcatccaacgtatctgagatacgaaattctggt 1695 ||||||||||||||| | ||||||||| ||||||||||| Sbjct: 35789958 agatactgcatccaatatctctgagataagaaattctggt 35789919 Score = 48.1 bits (24), Expect = 0.15 Identities = 78/96 (81%) Strand = Plus / Minus Query: 1289 ctatggaggagatgatgttgcgtggtgttctggaagttacaaaaccaatgctggggccaa 1348 ||||||||||||||||| || ||||| | ||||| | ||||||| ||| ||| |||| Sbjct: 35790526 ctatggaggagatgatgatgaatggtgctttggaaatagcaaaacctctgcagggtccaa 35790467 Query: 1349 tgtatggcattggcacacatcttgctccagcgaact 1384 ||||||| |||| | |||||||||||||| |||| Sbjct: 35790466 tgtatggtgttggggctcatcttgctccagcaaact 35790431 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Minus Query: 370 acttagtggtgtaaatctgtaaagaaagtcaatacttagttttagttgag 419 |||||||||||| | |||||||||||| | ||||| ||| ||||||||| Sbjct: 35791586 acttagtggtgttagtctgtaaagaaaatgaatacccagtcttagttgag 35791537 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 33842510 cggcgcggcagcggcggcggc 33842530
>gb|AY109834.1| Zea mays CL7866_1 mRNA sequence Length = 1353 Score = 188 bits (95), Expect = 6e-44 Identities = 188/219 (85%) Strand = Plus / Minus Query: 1424 atggcatcatgaggatgatgctgtgccgtgttataatggggaatgttgaggttgtacttc 1483 |||||||||| || |||||| |||||||||| |||||||| |||||||||||||| | | Sbjct: 911 atggcatcatcagaatgatgttgtgccgtgtaataatgggtaatgttgaggttgttttgc 852 Query: 1484 ctggatcaaagcaattccagccaaccaatggaacatttgatagtggcgtggatgatcttc 1543 |||||||||||||||| |||||| ||||||||| ||||||| ||| ||||||||||||| Sbjct: 851 ctggatcaaagcaatttcagccatccaatggaagttttgataatggtgtggatgatcttc 792 Query: 1544 aaaagccaaagcactatatcatatgggatgctaatgtacatcgacatatctatgctgaat 1603 |||| ||| || | || ||| |||||||||||||||| ||| ||| || |||||||||| Sbjct: 791 aaaatccacagaattacatcgtatgggatgctaatgtgcataaacacatatatgctgaat 732 Query: 1604 atgctgttcttatcaaagcaccttccatgaccaatgaat 1642 |||||||| || || |||||||| | |||||||||||| Sbjct: 731 atgctgttattgtccaagcacctctcgtgaccaatgaat 693 Score = 50.1 bits (25), Expect = 0.038 Identities = 67/81 (82%) Strand = Plus / Minus Query: 1080 acgtgttgattcagctgtgcggaaattattacttgaaggggtaggccaacctttcagtga 1139 |||| ||||||||||||||||||| || || || |||| |||| || || || ||||| Sbjct: 1255 acgtattgattcagctgtgcggaatttgttgctcaaaggattaggtcagccgtttagtga 1196 Query: 1140 agaagatattattggcatcta 1160 |||||||||||||| ||||| Sbjct: 1195 ggaagatattattggtatcta 1175 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1886 actatgaagaattcaagagga 1906 ||||||||||||||||||||| Sbjct: 464 actatgaagaattcaagagga 444
>dbj|AB260621.1| Oryza rufipogon DNA, locus RLD24, clone:24SNP99W1965 Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260620.1| Oryza rufipogon DNA, locus RLD24, clone:24SNP98W1964 Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260619.1| Oryza rufipogon DNA, locus RLD24, clone:24SNP96W1956 Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260618.1| Oryza rufipogon DNA, locus RLD24, clone:24SNP91W108 Length = 653 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260617.1| Oryza glaberrima DNA, locus RLD24, clone:24SNP87W440 Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260616.1| Oryza glaberrima DNA, locus RLD24, clone:24SNP85W401 Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260615.1| Oryza sativa (indica cultivar-group) DNA, locus RLD24, clone:24SNP84C8005 Length = 654 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260614.1| Oryza sativa (indica cultivar-group) DNA, locus RLD24, clone:24SNP82_1034 Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260613.1| Oryza sativa (indica cultivar-group) DNA, locus RLD24, clone:24SNP79_435 Length = 653 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260612.1| Oryza sativa (indica cultivar-group) DNA, locus RLD24, clone:24SNP77_415 Length = 654 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260611.1| Oryza sativa (indica cultivar-group) DNA, locus RLD24, clone:24SNP71_101 Length = 654 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260610.1| Oryza sativa (indica cultivar-group) DNA, locus RLD24, clone:24SNP70IR36 Length = 654 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260609.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD24, clone:24SNP62Nippo Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260608.1| Oryza sativa (indica cultivar-group) DNA, locus RLD24, clone:24SNP45Kasal Length = 654 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260607.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD24, clone:24SNP42Dungh Length = 654 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260606.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD24, clone:24SNP356_CT55 Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260605.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD24, clone:24SNP40Iwate Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260604.1| Oryza rufipogon DNA, locus RLD24, clone:24SNP375W1294-1 Length = 648 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260603.1| Oryza rufipogon DNA, locus RLD24, clone:24SNP374W1236-1 Length = 654 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260602.1| Oryza rufipogon DNA, locus RLD24, clone:24SNP369_SN Length = 653 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260601.1| Oryza rufipogon DNA, locus RLD24, clone:24SNP362_CB22 Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260600.1| Oryza rufipogon DNA, locus RLD24, clone:24SNP358_YG2A Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260599.1| Oryza rufipogon DNA, locus RLD24, clone:24SNP356_CT55 Length = 653 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260598.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD24, clone:24SNP225Kosh Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260597.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD24, clone:24SNP216Yume Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260596.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD24, clone:24SNP208Some Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260595.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD24, clone:24SNP16Unr17 Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260594.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD24, clone:24SNP166Hime Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260593.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD24, clone:24SNP117Kake Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260592.1| Oryza barthii DNA, locus RLD24, clone:24SNP114W720 Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260591.1| Oryza meridionalis DNA, locus RLD24, clone:24SNP108W1300 Length = 652 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB260590.1| Oryza glumipatula DNA, locus RLD24, clone:24SNP102W1169 Length = 648 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1947 gattgtcggtgacaagctgctggtttctacagtagtgag 1985 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 1 gattgttggtgacaagcttttggtttctacagtagtgag 39
>dbj|AB089269.1| Triticum aestivum D31 mRNA for fructan exohydrolase, complete cds Length = 2319 Score = 52.0 bits (26), Expect = 0.010 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1931 tgagacggctaagacagattgtcggtgacaagctgctggtttctacagta 1980 |||||| || |||| |||| || || |||||||||||||||||||||||| Sbjct: 2296 tgagacagccaagaaagatcgttggcgacaagctgctggtttctacagta 2247
>gb|BT018474.1| Zea mays clone EL01N0423D02.d mRNA sequence Length = 1287 Score = 50.1 bits (25), Expect = 0.038 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1438 atgatgctgtgccgtgttataatggggaa 1466 |||||| |||||||||||||||||||||| Sbjct: 269 atgatgttgtgccgtgttataatggggaa 297
>gb|AY596578.1| Saccharum officinarum clone SCCCCL4008H10, complete sequence Length = 2639 Score = 50.1 bits (25), Expect = 0.038 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1438 atgatgctgtgccgtgttataatggggaa 1466 |||||| |||||||||||||||||||||| Sbjct: 1620 atgatgttgtgccgtgttataatggggaa 1648
>gb|AY104183.1| Zea mays PCO088366 mRNA sequence Length = 2628 Score = 50.1 bits (25), Expect = 0.038 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1438 atgatgctgtgccgtgttataatggggaa 1466 |||||| |||||||||||||||||||||| Sbjct: 1607 atgatgttgtgccgtgttataatggggaa 1635
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 46.1 bits (23), Expect = 0.59 Identities = 26/27 (96%) Strand = Plus / Plus Query: 76 tgctccgcggcgcggcagcggcggcgg 102 ||||| ||||||||||||||||||||| Sbjct: 3400482 tgctcggcggcgcggcagcggcggcgg 3400508
>ref|NM_001067326.1| Oryza sativa (japonica cultivar-group) Os08g0106300 (Os08g0106300) mRNA, complete cds Length = 1575 Score = 46.1 bits (23), Expect = 0.59 Identities = 26/27 (96%) Strand = Plus / Plus Query: 77 gctccgcggcgcggcagcggcggcggc 103 ||||||||||||||| ||||||||||| Sbjct: 543 gctccgcggcgcggcggcggcggcggc 569
>ref|XM_001089583.1| PREDICTED: Macaca mulatta hypothetical protein LOC701261 (LOC701261), mRNA Length = 2092 Score = 46.1 bits (23), Expect = 0.59 Identities = 26/27 (96%) Strand = Plus / Plus Query: 591 gaccttctgtgctggccatattctgga 617 |||||||||||||||||||||| |||| Sbjct: 788 gaccttctgtgctggccatattttgga 814
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 46.1 bits (23), Expect = 0.59 Identities = 26/27 (96%) Strand = Plus / Plus Query: 77 gctccgcggcgcggcagcggcggcggc 103 ||||||||||||||| ||||||||||| Sbjct: 313160 gctccgcggcgcggcggcggcggcggc 313186 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 11353487 cggcgcggcagcggcggcggc 11353507
>emb|AL078594.36|HSDJ293L8 Human DNA sequence from clone RP1-293L8 on chromosome 6q22.2-22.33 Contains the 3' part of a novel gene, the 5' part of a novel gene, the HEY2 gene for hairy/enhancer-of-split related with YRPW motif 2, a novel gene, the 5' part of the gene for endoplasmic reticulum associated protein 140 kDa (ERAP140) (similar to nucleolar protein C7B) and four putative CpG islands, complete sequence Length = 164808 Score = 46.1 bits (23), Expect = 0.59 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 ctgatctgaacaacaggagcagc 199 ||||||||||||||||||||||| Sbjct: 137772 ctgatctgaacaacaggagcagc 137750
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 46.1 bits (23), Expect = 0.59 Identities = 26/27 (96%) Strand = Plus / Plus Query: 77 gctccgcggcgcggcagcggcggcggc 103 ||||||||||||||| ||||||||||| Sbjct: 22674 gctccgcggcgcggcggcggcggcggc 22700
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1300_E01 Length = 103022 Score = 46.1 bits (23), Expect = 0.59 Identities = 26/27 (96%) Strand = Plus / Plus Query: 77 gctccgcggcgcggcagcggcggcggc 103 ||||||||||||||| ||||||||||| Sbjct: 79586 gctccgcggcgcggcggcggcggcggc 79612
>ref|XM_414842.2| PREDICTED: Gallus gallus similar to KIAA1738 protein (LOC416541), mRNA Length = 2883 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 ggcgcggcagcggcggcggctt 105 |||||||||||||||||||||| Sbjct: 787 ggcgcggcagcggcggcggctt 766
>emb|BX248583.1| Blochmannia floridanus complete genome Length = 705557 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1658 atactgcatccaacgtatctgagata 1683 |||||||||||||| ||||||||||| Sbjct: 570324 atactgcatccaacttatctgagata 570349
>emb|CT832146.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA127M21, full insert sequence Length = 1885 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 370 acttagtggtgtaaatctgtaaagaaagtcaatacttagttttagttgag 419 |||||||||||| | |||||||||||| | ||||| ||| ||||||||| Sbjct: 1829 acttagtggtgttagtctgtaaagaaaatgaatacccagtcttagttgag 1878
>ref|NM_001052981.1| Oryza sativa (japonica cultivar-group) Os02g0251700 (Os02g0251700) mRNA, complete cds Length = 988 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 ccgcggcgcggcagcggcggcg 101 |||||||||||||||||||||| Sbjct: 113 ccgcggcgcggcagcggcggcg 92
>ref|XM_001173845.1| PREDICTED: Pan troglodytes carnitine palmitoyltransferase 1A, transcript variant 5 (CPT1A), mRNA Length = 4394 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 gcggcgcggcagcggcggcggc 103 |||||||||||||||||||||| Sbjct: 123 gcggcgcggcagcggcggcggc 102
>ref|XM_001173853.1| PREDICTED: Pan troglodytes carnitine palmitoyltransferase 1A, transcript variant 6 (CPT1A), mRNA Length = 4431 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 gcggcgcggcagcggcggcggc 103 |||||||||||||||||||||| Sbjct: 127 gcggcgcggcagcggcggcggc 106
>ref|XM_001173820.1| PREDICTED: Pan troglodytes carnitine palmitoyltransferase 1A, transcript variant 2 (CPT1A), mRNA Length = 4427 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 gcggcgcggcagcggcggcggc 103 |||||||||||||||||||||| Sbjct: 30 gcggcgcggcagcggcggcggc 9
>ref|XM_508606.2| PREDICTED: Pan troglodytes carnitine palmitoyltransferase 1A, transcript variant 7 (CPT1A), mRNA Length = 2638 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 gcggcgcggcagcggcggcggc 103 |||||||||||||||||||||| Sbjct: 123 gcggcgcggcagcggcggcggc 102
>gb|AC147990.3| Mus musculus BAC clone RP24-396B13 from chromosome 17, complete sequence Length = 145085 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1738 gcatctccagctgataaacaac 1759 |||||||||||||||||||||| Sbjct: 60392 gcatctccagctgataaacaac 60413
>gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, complete sequence Length = 194372 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1738 gcatctccagctgataaacaac 1759 |||||||||||||||||||||| Sbjct: 6814 gcatctccagctgataaacaac 6835
>gb|AC023483.5| Homo sapiens chromosome 3 clone RP11-453A3 map 3p, complete sequence Length = 171051 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 381 taaatctgtaaagaaagtcaat 402 |||||||||||||||||||||| Sbjct: 97057 taaatctgtaaagaaagtcaat 97078
>gb|AC034191.6| Homo sapiens chromosome 3 clone RP11-344L9 map 3p, complete sequence Length = 172221 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 381 taaatctgtaaagaaagtcaat 402 |||||||||||||||||||||| Sbjct: 32846 taaatctgtaaagaaagtcaat 32867
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 ccgcggcgcggcagcggcggcg 101 |||||||||||||||||||||| Sbjct: 8535585 ccgcggcgcggcagcggcggcg 8535564
>dbj|AB029901.2| Homo sapiens CST gene for cerebroside sulfotransferase, complete cds Length = 25926 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 cgcggcgcggcagcggcggcgg 102 |||||||||||||||||||||| Sbjct: 5728 cgcggcgcggcagcggcggcgg 5749
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0009N02 Length = 121142 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 ccgcggcgcggcagcggcggcg 101 |||||||||||||||||||||| Sbjct: 4908 ccgcggcgcggcagcggcggcg 4887
>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1113_G05 Length = 131445 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 ccgcggcgcggcagcggcggcg 101 |||||||||||||||||||||| Sbjct: 84855 ccgcggcgcggcagcggcggcg 84834
>gb|AC005006.2|AC005006 Homo sapiens clone RP1-56J10, complete sequence Length = 101720 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 cgcggcgcggcagcggcggcgg 102 |||||||||||||||||||||| Sbjct: 23899 cgcggcgcggcagcggcggcgg 23878
>dbj|AK101906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071E07, full insert sequence Length = 989 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 ccgcggcgcggcagcggcggcg 101 |||||||||||||||||||||| Sbjct: 114 ccgcggcgcggcagcggcggcg 93
>dbj|AK062754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-G06, full insert sequence Length = 417 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 370 acttagtggtgtaaatctgtaaagaaagtcaatacttagttttagttgag 419 |||||||||||| | |||||||||||| | ||||| ||| ||||||||| Sbjct: 360 acttagtggtgttagtctgtaaagaaaatgaatacccagtcttagttgag 409
>ref|XM_565198.1| Anopheles gambiae str. PEST ENSANGP00000028565 (ENSANGG00000024686), partial mRNA Length = 2187 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggct 104 |||||||||||||||||||||| Sbjct: 792 cggcgcggcagcggcggcggct 771
>gb|AF129401.1|AF129401 Petromyzon marinus engrailed-related homeobox protein (enga) gene, exon 2 and partial cds Length = 1275 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcggcgcggcagcggcggcggc 103 |||||||||||||||||||||| Sbjct: 884 gcggcgcggcagcggcggcggc 905
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 gcggcgcggcagcggcggcgg 102 ||||||||||||||||||||| Sbjct: 1989902 gcggcgcggcagcggcggcgg 1989882
>gb|BC126534.1| Bos taurus microtubule-associated protein 4, mRNA (cDNA clone IMAGE:8242687), complete cds Length = 3008 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 78 cggcgcggcagcggcggcggc 98
>emb|CR846082.13| Zebrafish DNA sequence from clone DKEY-126H10 in linkage group 20, complete sequence Length = 174032 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tctataaaatatggaaaggaa 443 ||||||||||||||||||||| Sbjct: 58288 tctataaaatatggaaaggaa 58308
>ref|NM_001072026.1| Oryza sativa (japonica cultivar-group) Os10g0577800 (Os10g0577800) mRNA, complete cds Length = 2591 Score = 42.1 bits (21), Expect = 9.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1438 atgatgctgtgccgtgttataatggggaa 1466 |||||| ||||||||||| |||||||||| Sbjct: 1654 atgatgttgtgccgtgttgtaatggggaa 1682
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 ccgtcttcgccccgcccaccg 27 ||||||||||||||||||||| Sbjct: 11772963 ccgtcttcgccccgcccaccg 11772983
>gb|AC188471.2| Taeniopygia guttata BAC clone TGMCBa-42H12 from chromosome unknown, complete sequence Length = 128807 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1123 ggccaacctttcagtgaagaa 1143 ||||||||||||||||||||| Sbjct: 85941 ggccaacctttcagtgaagaa 85921
>emb|CT963079.4| M.truncatula DNA sequence from clone MTH2-64N20 on chromosome 3, complete sequence Length = 92896 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 gatctgaacaacaggagcagc 199 ||||||||||||||||||||| Sbjct: 11872 gatctgaacaacaggagcagc 11892
>gb|CP000246.1| Clostridium perfringens ATCC 13124, complete genome Length = 3256683 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1206 tttccagaaggaacttgaagt 1226 ||||||||||||||||||||| Sbjct: 1880618 tttccagaaggaacttgaagt 1880598
>gb|AC185999.2| Pan troglodytes BAC clone CH251-186C12 from chromosome 9, complete sequence Length = 169499 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1619 aagcaccttccatgaccaatgaata 1643 ||||| ||||||||||||||||||| Sbjct: 28044 aagcagcttccatgaccaatgaata 28020
>gb|AC183772.2| Pan troglodytes BAC clone CH251-73E21 from chromosome 9, complete sequence Length = 162544 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1619 aagcaccttccatgaccaatgaata 1643 ||||| ||||||||||||||||||| Sbjct: 81069 aagcagcttccatgaccaatgaata 81093
>gb|AC007470.12| Drosophila melanogaster clone BACR14H22, complete sequence Length = 175977 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ccgtcttcgccccgcccaccg 27 ||||||||||||||||||||| Sbjct: 21215 ccgtcttcgccccgcccaccg 21195
>gb|AC107752.8| Mus musculus chromosome 10, clone RP23-244J13, complete sequence Length = 208458 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1739 catctccagctgataaacaac 1759 ||||||||||||||||||||| Sbjct: 169595 catctccagctgataaacaac 169615
>gb|AY020229.1| Oryza sativa microsatellite MRG2554 containing (GA)X12, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 160 cggcgcggcagcggcggcggc 180
>gb|AC130730.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0681D04, complete sequence Length = 163670 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 113349 cggcgcggcagcggcggcggc 113329 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 117804 cggcgcggcagcggcggcggc 117824
>ref|XM_873209.1| PREDICTED: Bos taurus similar to Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2), transcript variant 3 (LOC539629), mRNA Length = 761 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 72 cggcgcggcagcggcggcggc 52
>ref|XM_588477.2| PREDICTED: Bos taurus similar to Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2), transcript variant 1 (LOC539629), mRNA Length = 2110 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 72 cggcgcggcagcggcggcggc 52
>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete sequence Length = 191358 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1894 gaattcaagaggagaaagata 1914 ||||||||||||||||||||| Sbjct: 23249 gaattcaagaggagaaagata 23229
>gb|AC132486.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0473H02, complete sequence Length = 141027 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 11759 cggcgcggcagcggcggcggc 11739 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 16214 cggcgcggcagcggcggcggc 16234
>gb|AC127303.3| Mus musculus BAC clone RP23-280E20 from chromosome X, complete sequence Length = 212318 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1739 catctccagctgataaacaac 1759 ||||||||||||||||||||| Sbjct: 88802 catctccagctgataaacaac 88782
>gb|AC100708.10| Mus musculus chromosome 10, clone RP23-169I18, complete sequence Length = 196776 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2210 tggtgtagctttgtttggttc 2230 ||||||||||||||||||||| Sbjct: 8438 tggtgtagctttgtttggttc 8458
>ref|XM_862378.1| PREDICTED: Canis familiaris similar to Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2), transcript variant 2 (LOC612973), mRNA Length = 1542 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 72 cggcgcggcagcggcggcggc 52
>ref|XM_848395.1| PREDICTED: Canis familiaris similar to Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2), transcript variant 1 (LOC612973), mRNA Length = 1793 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 72 cggcgcggcagcggcggcggc 52
>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence, complete sequence Length = 159795 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 121202 cggcgcggcagcggcggcggc 121182
>gb|AC131341.3| Mus musculus BAC clone RP24-263O10 from chromosome 17, complete sequence Length = 152220 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1055 agcaagaacagaagaaaattg 1075 ||||||||||||||||||||| Sbjct: 114258 agcaagaacagaagaaaattg 114278
>gb|AC006035.2| Homo sapiens BAC clone RP11-196O16 from 7, complete sequence Length = 182372 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 863 gcttctttccagatttatgtg 883 ||||||||||||||||||||| Sbjct: 66906 gcttctttccagatttatgtg 66926
>gb|AC114407.24| Mus musculus chromosome 10, clone RP23-51G1, complete sequence Length = 143388 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1739 catctccagctgataaacaac 1759 ||||||||||||||||||||| Sbjct: 46048 catctccagctgataaacaac 46068
>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome Length = 1166239 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1053 ggagcaagaacagaagaaaat 1073 ||||||||||||||||||||| Sbjct: 321381 ggagcaagaacagaagaaaat 321401
>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete sequence Length = 64582 Score = 42.1 bits (21), Expect = 9.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1438 atgatgctgtgccgtgttataatggggaa 1466 |||||| ||||||||||| |||||||||| Sbjct: 32400 atgatgttgtgccgtgttgtaatggggaa 32372
>gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genomic sequence, complete sequence Length = 126862 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 123407 cggcgcggcagcggcggcggc 123427
>gb|AC108724.4| Homo sapiens 3 BAC RP11-413E6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186773 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2115 ggagacggagagcacaaggac 2135 ||||||||||||||||||||| Sbjct: 61178 ggagacggagagcacaaggac 61158
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 853236 cggcgcggcagcggcggcggc 853256
>gb|AC139337.5| Homo sapiens 3 BAC RP11-301H7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142201 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 404 cttagttttagttgagctttctata 428 |||||||||| |||||||||||||| Sbjct: 53293 cttagttttacttgagctttctata 53269
>gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, complete sequence Length = 191144 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2115 ggagacggagagcacaaggac 2135 ||||||||||||||||||||| Sbjct: 142665 ggagacggagagcacaaggac 142645
>gb|AC144547.6| Homo sapiens 12 BAC RP13-653N12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 59051 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 781 ttggactttatgcacatggtc 801 ||||||||||||||||||||| Sbjct: 34622 ttggactttatgcacatggtc 34642
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 gctccgcggcgcggcagcggc 97 ||||||||||||||||||||| Sbjct: 5272024 gctccgcggcgcggcagcggc 5272044
>gb|AC104322.4| Oryza sativa chromosome 10 BAC OSJNBb0005F01 genomic sequence, complete sequence Length = 151428 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 6615 cggcgcggcagcggcggcggc 6635
>gb|AC163294.2| Mus musculus BAC clone RP23-187J1 from chromosome 9, complete sequence Length = 203706 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1739 catctccagctgataaacaac 1759 ||||||||||||||||||||| Sbjct: 69793 catctccagctgataaacaac 69773
>gb|AC105746.10| Oryza sativa chromosome 10 BAC OSJNBb0086I08 genomic sequence, complete sequence Length = 126842 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 81879 cggcgcggcagcggcggcggc 81899
>gb|AC090577.4| Homo sapiens chromosome 8, clone RP11-575N24, complete sequence Length = 162391 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 609 tattctggagtggtataagaa 629 ||||||||||||||||||||| Sbjct: 16002 tattctggagtggtataagaa 15982
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12, complete sequence Length = 129420 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 82946 cggcgcggcagcggcggcggc 82926
>ref|XM_741745.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g00920) partial mRNA Length = 1272 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 722 aggacttccagttgaagaggc 742 ||||||||||||||||||||| Sbjct: 952 aggacttccagttgaagaggc 932
>emb|BX284677.8| Human DNA sequence from clone RP11-315E10 on chromosome 9, complete sequence Length = 166687 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1619 aagcaccttccatgaccaatgaata 1643 ||||| ||||||||||||||||||| Sbjct: 91084 aagcaacttccatgaccaatgaata 91108
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 853236 cggcgcggcagcggcggcggc 853256 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 5585243 cggcgcggcagcggcggcggc 5585223 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 6071610 cggcgcggcagcggcggcggc 6071630 Score = 42.1 bits (21), Expect = 9.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1438 atgatgctgtgccgtgttataatggggaa 1466 |||||| ||||||||||| |||||||||| Sbjct: 22516682 atgatgttgtgccgtgttgtaatggggaa 22516654 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 22658893 cggcgcggcagcggcggcggc 22658913
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 agctaggttaagctatactct 363 ||||||||||||||||||||| Sbjct: 13091979 agctaggttaagctatactct 13091999
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 3480804 cggcgcggcagcggcggcggc 3480824 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 26990652 cggcgcggcagcggcggcggc 26990632
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 5689385 cggcgcggcagcggcggcggc 5689365 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 5693840 cggcgcggcagcggcggcggc 5693860
>emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chromosome 9 Contains a RAB28, member RAS oncogene family pseudogene (RAB28), a pseudogene similar to part of recombining binding protein suppressor of hairless (Drosophila) (RBPSUH), two novel pseudogenes, a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), the 3' end of a novel gene and two CpG islands, complete sequence Length = 163837 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1619 aagcaccttccatgaccaatgaata 1643 ||||| ||||||||||||||||||| Sbjct: 102010 aagcaacttccatgaccaatgaata 102034
>emb|BX664718.7| Human DNA sequence from clone RP11-175I6 on chromosome 9 Conatins a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), two novel pseudogenes, a pseudogene similar to part of G protein-coupled receptor 116 (GPR116), a novel gene and a pseudogene similar to part of meprin A, alpha (PABA peptide hydrolase) (MEP1A), complete sequence Length = 167646 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1619 aagcaccttccatgaccaatgaata 1643 ||||| ||||||||||||||||||| Sbjct: 79142 aagcagcttccatgaccaatgaata 79118
>emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chromosome 9 Contains a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), three novel pseudogenes, two novel genes, a recombining binding protein suppressor of hairless (Drosophila) (RBPSUH) pseudogene, a RAB28, member RAS oncogene family (RAB28) pseudogene and two CpG islands, complete sequence Length = 202891 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1619 aagcaccttccatgaccaatgaata 1643 ||||| ||||||||||||||||||| Sbjct: 112273 aagcaacttccatgaccaatgaata 112249
>emb|BX005266.6| Human DNA sequence from clone RP11-211N8 on chromosome 9 Contains two novel pseudogenes, two novel genes, a recombining binding protein suppressor of hairless (Drosophila) (RBPSUH) pseudogene, a RAB28, member RAS oncogene family (RAB28) pseudogene and a G protein-coupled receptor, family C, group 5,member B (GPRC5B) pseudogene, complete sequence Length = 157298 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1619 aagcaccttccatgaccaatgaata 1643 ||||| ||||||||||||||||||| Sbjct: 69507 aagcaacttccatgaccaatgaata 69483
>emb|AL512625.10| Human DNA sequence from clone RP11-262H14 on chromosome 9 Contains three novel genes, a novel pseudogene, two novel pseudogenes (LOC339742), a tumor suppressor deleted in oral cancer-related 1 (DOC-1R) pseudogene, a pseudogene similar to part of prostaglandin E receptor 4 (subtype EP4) (PTGER4), a pseudogene similar to part of myosin VA (heavy polypeptide 12, myoxin) (MYO5A), a pseudogene similar to part of G protein-coupled receptor 116 (GPR116), a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7) and five CpG islands, complete sequence Length = 159539 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1619 aagcaccttccatgaccaatgaata 1643 ||||| ||||||||||||||||||| Sbjct: 114757 aagcaacttccatgaccaatgaata 114733
>gb|AC158998.2| Mus musculus BAC clone RP24-290P19 from chromosome 9, complete sequence Length = 173036 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1739 catctccagctgataaacaac 1759 ||||||||||||||||||||| Sbjct: 24141 catctccagctgataaacaac 24161
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 113562 cggcgcggcagcggcggcggc 113582
>gb|AC093199.1| Drosophila melanogaster, chromosome 2L, region 33A-33A, BAC clone BACR05B13, complete sequence Length = 168641 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ccgtcttcgccccgcccaccg 27 ||||||||||||||||||||| Sbjct: 105807 ccgtcttcgccccgcccaccg 105787
>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a pseudogene similar to part of a novel protein (DKFZp434A171), a pseudogene similar to part of meprin A, alpha (PABA peptide hydrolase) (MEP1A), a pseudogene similar to part of a novel transmembrane receptor protein and two novel pseudogenes, complete sequence Length = 189495 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1619 aagcaccttccatgaccaatgaata 1643 ||||| ||||||||||||||||||| Sbjct: 117018 aagcagcttccatgaccaatgaata 117042
>emb|AL590616.23| Mouse DNA sequence from clone RP23-231P12 on chromosome 13 Contains the gene for prolactin-like protein L and the Prlpa gene for prolactin-like protein A, complete sequence Length = 202629 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1739 catctccagctgataaacaac 1759 ||||||||||||||||||||| Sbjct: 143036 catctccagctgataaacaac 143056
>gb|AC097475.2| Homo sapiens BAC clone RP11-95J1 from 4, complete sequence Length = 136159 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1049 tactggagcaagaacagaaga 1069 ||||||||||||||||||||| Sbjct: 13209 tactggagcaagaacagaaga 13189
>gb|AC108066.3| Homo sapiens BAC clone RP11-521H5 from 2, complete sequence Length = 158599 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1288 gctatggaggagatgatgttg 1308 ||||||||||||||||||||| Sbjct: 155421 gctatggaggagatgatgttg 155401
>gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome 17, complete sequence Length = 217844 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1055 agcaagaacagaagaaaattg 1075 ||||||||||||||||||||| Sbjct: 140586 agcaagaacagaagaaaattg 140566
>dbj|AP005168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066B06 Length = 154025 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 agctaggttaagctatactct 363 ||||||||||||||||||||| Sbjct: 10306 agctaggttaagctatactct 10326
>dbj|AP004696.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0475A09 Length = 143417 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 91092 cggcgcggcagcggcggcggc 91112
>emb|CR759739.2| Human DNA sequence from clone XX-NCIH2171_18I22, complete sequence Length = 252905 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 609 tattctggagtggtataagaa 629 ||||||||||||||||||||| Sbjct: 199844 tattctggagtggtataagaa 199824
>emb|CR788307.3| Human DNA sequence from clone RP11-384N15 on chromosome 9, complete sequence Length = 166827 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1619 aagcaccttccatgaccaatgaata 1643 ||||| ||||||||||||||||||| Sbjct: 113509 aagcaacttccatgaccaatgaata 113485
>gb|AC132265.4| Mus musculus BAC clone RP24-373J20 from chromosome 10, complete sequence Length = 178780 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2210 tggtgtagctttgtttggttc 2230 ||||||||||||||||||||| Sbjct: 53390 tggtgtagctttgtttggttc 53370
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1206 tttccagaaggaacttgaagt 1226 ||||||||||||||||||||| Sbjct: 1662440 tttccagaaggaacttgaagt 1662420
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 97508 cggcgcggcagcggcggcggc 97528
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 114413 cggcgcggcagcggcggcggc 114393
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 agctaggttaagctatactct 363 ||||||||||||||||||||| Sbjct: 166276 agctaggttaagctatactct 166296
>dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene for fertility restorer, PPR794, PPR683, PPR762 genes for hypothetical protein, complete cds Length = 76363 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcgcggcagcggcggcggc 103 ||||||||||||||||||||| Sbjct: 59634 cggcgcggcagcggcggcggc 59614
>dbj|AK072769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139M21, full insert sequence Length = 2592 Score = 42.1 bits (21), Expect = 9.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1438 atgatgctgtgccgtgttataatggggaa 1466 |||||| ||||||||||| |||||||||| Sbjct: 1655 atgatgttgtgccgtgttgtaatggggaa 1683
>emb|AL672245.6| Mouse DNA sequence from clone RP23-43K8 on chromosome X, complete sequence Length = 235666 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1739 catctccagctgataaacaac 1759 ||||||||||||||||||||| Sbjct: 216326 catctccagctgataaacaac 216306
>emb|AL592170.21| Human DNA sequence from clone RP11-298A19 on chromosome 22, complete sequence Length = 186861 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2115 ggagacggagagcacaaggac 2135 ||||||||||||||||||||| Sbjct: 61390 ggagacggagagcacaaggac 61370
>emb|BX072557.8| Mouse DNA sequence from clone RP23-79L4 on chromosome X, complete sequence Length = 198694 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1739 catctccagctgataaacaac 1759 ||||||||||||||||||||| Sbjct: 1124 catctccagctgataaacaac 1104
>emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on chromosome 9, complete sequence Length = 186615 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1619 aagcaccttccatgaccaatgaata 1643 ||||| ||||||||||||||||||| Sbjct: 26772 aagcaacttccatgaccaatgaata 26796
>emb|AL929532.12| Mouse DNA sequence from clone RP23-138C21 on chromosome 4, complete sequence Length = 133386 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1739 catctccagctgataaacaac 1759 ||||||||||||||||||||| Sbjct: 121130 catctccagctgataaacaac 121110
>emb|AL683827.6| Mouse DNA sequence from clone RP23-473F3 on chromosome X, complete sequence Length = 181878 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1739 catctccagctgataaacaac 1759 ||||||||||||||||||||| Sbjct: 181002 catctccagctgataaacaac 180982 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 429,466,209 Number of extensions: 23067631 Number of successful extensions: 142213 Number of sequences better than 10.0: 146 Number of HSP's gapped: 142207 Number of HSP's successfully gapped: 188 Length of query: 2400 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2377 Effective length of database: 18,503,978,556 Effective search space: 43983957027612 Effective search space used: 43983957027612 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
