ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf36o11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK062622:Os03g0845700 249 2e-66
2AK068912:Os06g0697400 148 4e-36
3AK072244:Os05g0405900 31 1.0
4AK107377: 28 8.5

>AK062622:Os03g0845700 |
          Length = 148
 Score =  249 bits (635), Expect = 2e-66
 Identities = 120/148 (81%), Positives = 135/148 (91%)
 Frame = +2

Query: 125 MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLDMYMQLDIATDVYPMHMGDKFTMVL 304
           MAE LFEDIF VTR+DPDGKKFDRV+RIEARS+Q DMYMQLD+ATDVYPMH GD+FTMVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60

Query: 305 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDGGSKDKTAPKVEIYASFGG 484
            PTLNLDGTPD+ ++TQAGRKTLADKY+YVMHGKLYKISED  + D+ A KVE+YASFGG
Sbjct: 61  VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 120

Query: 485 LLMLLKGDASSAANLELDQRLFLLIRKV 568
           LL++LKGD SSAAN ELDQRLFLL+RKV
Sbjct: 121 LLVMLKGDPSSAANFELDQRLFLLMRKV 148



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>AK068912:Os06g0697400 |
          Length = 103

 Score =  148 bits (374), Expect = 4e-36
 Identities = 70/84 (83%), Positives = 76/84 (90%)
 Frame = +2

Query: 197 VNRIEARSEQLDMYMQLDIATDVYPMHMGDKFTMVLAPTLNLDGTPDTGYYTQAGRKTLA 376
           V+RIEARSEQ DMYMQLD+AT+VYPM  GD+FTMVLAPTLNLDGTPDTG+YTQAGRKTLA
Sbjct: 10  VSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLA 69

Query: 377 DKYDYVMHGKLYKISEDGGSKDKT 448
           DK+DYVMHGKLYKISED  S   T
Sbjct: 70  DKFDYVMHGKLYKISEDSSSGQAT 93



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>AK072244:Os05g0405900 |
          Length = 1006

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
 Frame = -3

Query: 336 SGVPSRFNVGAKTMVNLSPICIG*TSVAISNCMYMSNCSLLASMRLTLSNFLPSGSILVT 157
           S  P   + G  +  NL+P      S  +S     S+ SL+A   +  S  + +G I + 
Sbjct: 256 SNSPLLSSTGRLSPQNLTP------SPGVSPSTSPSSGSLVARYAMESSKQIAAGIINLG 309

Query: 156 ---WKMSSKRCSAIFPEAPGRSRSGSPGLRCGE 67
              +K  SK C    P+  G   S SPG R G+
Sbjct: 310 DMGYKTLSKYCQEFLPDGSGSPLSSSPGRRSGK 342



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>AK107377: |
          Length = 347

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 748 LRGNKDKRLVLLRRRCTNPESYYRQKSTQGGR 653
           + G  +K+L  L+++  NP+ Y   K+ +GG+
Sbjct: 302 ISGLSEKKLAKLKKKGINPQLYMEMKAARGGK 333


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 26,281,542
Number of extensions: 597254
Number of successful extensions: 1469
Number of sequences better than 10.0: 4
Number of HSP's gapped: 1469
Number of HSP's successfully gapped: 4
Length of query: 294
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 194
Effective length of database: 11,395,755
Effective search space: 2210776470
Effective search space used: 2210776470
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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