ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf36o11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT829297.1| Oryza sativa (indica cultivar-group) cDNA clone:... 250 7e-63
2ref|NM_001064996.1| Oryza sativa (japonica cultivar-group) Os06g... 190 6e-45
3dbj|AK068912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 6e-45
4ref|NM_001058415.1| Oryza sativa (japonica cultivar-group) Os03g... 151 5e-33
5dbj|AK062622.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 5e-33
6gb|DQ244706.1| Zea mays clone 10219 mRNA sequence 115 3e-22
7gb|AY106067.2| Zea mays PCO144871 mRNA sequence 113 1e-21
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 105 3e-19
9dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 105 3e-19
10gb|DQ244414.1| Zea mays clone 7318 mRNA sequence 98 7e-17
11gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 70 1e-08
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
13gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genom... 70 1e-08
14gb|DQ245729.1| Zea mays clone 19979 mRNA sequence 60 1e-05
15ref|NM_115822.1| Arabidopsis thaliana DNA-directed RNA polymeras... 60 1e-05
16gb|BT008531.1| Arabidopsis thaliana clone U51390 unknown protein... 60 1e-05
17gb|AY086002.1| Arabidopsis thaliana clone 20583 mRNA, complete s... 60 1e-05
18emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, B... 60 1e-05
19dbj|AK119016.1| Arabidopsis thaliana At3g59600 mRNA for unknown ... 60 1e-05
20emb|BX826263.1|CNS0A7MO Arabidopsis thaliana Full-length cDNA Co... 60 1e-05
21emb|AJ538728.1|NTA538728 Nicotiana tabacum cDNA-AFLP-fragment BC... 56 2e-04
22dbj|AK227855.1| Arabidopsis thaliana mRNA for RNA polymerase I, ... 52 0.003
23ref|NM_104303.1| Arabidopsis thaliana ATRPABC16.5; DNA-directed ... 52 0.003
24gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 geno... 52 0.003
25gb|AY086894.1| Arabidopsis thaliana clone 29173 mRNA, complete s... 52 0.003
26gb|BT004791.1| Arabidopsis thaliana At1g54250 gene, complete cds 52 0.003
27gb|AF017074.1|AF017074 Arabidopsis thaliana RNA polymerase I, II... 52 0.003
28emb|Z21510.1|TATRINF4A T.aestivum translation initiation factor 4A 50 0.014
29gb|DQ381262.1| Ictalurus punctatus clone SGA12 SWAP-70 protein i... 48 0.054
30gb|AC186981.7| Canis Familiaris chromosome 6, clone XX-288M21, c... 44 0.84
31gb|DQ213335.1| Taeniopygia guttata clone 0062P0003E01 RNA polyme... 42 3.3
32emb|AL389915.19| Human DNA sequence from clone RP11-438P9 on chr... 42 3.3
33gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 3.3
34gb|AC074228.9|AC074228 Arabidopsis thaliana chromosome 1 BAC T7O... 42 3.3
35gb|AC073641.3| Homo sapiens BAC clone RP11-368E14 from 2, comple... 42 3.3
36ref|NM_207748.1| Eremothecium gossypii AAL147Cp (AAL147C), mRNA 42 3.3
37emb|AL935270.6| Mouse DNA sequence from clone RP23-391A14 on chr... 42 3.3
38gb|AY285246.1| Sus scrofa clone UMNp1098.gcg microsatellite sequ... 42 3.3 
>emb|CT829297.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN011E08, full
           insert sequence
          Length = 728
 Score =  250 bits (126), Expect = 7e-63
 Identities = 258/302 (85%)
 Strand = Plus / Plus

                                                                       
Query: 122 aaaatggcggagcatctcttcgaggacatcttccacgtgaccaggatcgaccctgacggc 181
           |||||||  ||||| || |||||||| ||||||   ||||||||| |||| ||||| || 
Sbjct: 63  aaaatggttgagcacctattcgaggatatcttcactgtgaccaggctcgatcctgatggg 122

                                                                       
Query: 182 aagaagttcgacagagttaatcgcattgaagctagaagtgagcagttggacatgtacatg 241
           ||||||||||||||||||| |||||| |||||| | ||||||||||| ||||||||||||
Sbjct: 123 aagaagttcgacagagttagtcgcatcgaagctcgtagtgagcagttcgacatgtacatg 182

                                                                       
Query: 242 caattagatatcgccactgatgtctacccaatgcatatgggtgacaagttcaccatggtt 301
           || |||||| | || ||||| ||||| || |||| |   |||||||  ||||||||||||
Sbjct: 183 cagttagatgttgctactgaggtctatccgatgcgtgctggtgacagattcaccatggtt 242

                                                                       
Query: 302 ttagctccgacattgaatctggatgggactccagacactggctactatacacaggctggt 361
           |||||||| ||  ||||||||||||| ||||| |||||||||| ||| || |||||||| 
Sbjct: 243 ttagctcctactctgaatctggatggaactccggacactggcttctacacgcaggctggc 302

                                                                       
Query: 362 aggaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagatttca 421
           || ||||||||||||||||||| ||||||||||||||| |||||||| |||||||| |||
Sbjct: 303 agaaaaacacttgctgacaagtttgactatgtcatgcatggaaagctctacaagatctca 362

             
Query: 422 ga 423
           ||
Sbjct: 363 ga 364



 Score =  111 bits (56), Expect = 4e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                       
Query: 455 aaagtggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgcttca 514
           |||||||||||||||||||| ||||||||||| |||||| ||||||| |||||  | || 
Sbjct: 390 aaagtggagatctatgcatcgtttggtggccttctgatgatgctcaagggtgacccctcc 449

                                                                   
Query: 515 agtgctgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgta 570
           ||||| |||| | | |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 450 agtgccgctagctttgagctggaccagaggctgttcctcctcattcgaaaggtgta 505
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>ref|NM_001064996.1| Oryza sativa (japonica cultivar-group) Os06g0697400 (Os06g0697400)
           mRNA, partial cds
          Length = 1725

 Score =  190 bits (96), Expect = 6e-45
 Identities = 195/228 (85%)
 Strand = Plus / Plus

                                                                       
Query: 196 agttaatcgcattgaagctagaagtgagcagttggacatgtacatgcaattagatatcgc 255
           ||||| |||||| |||||| | || |||||||| |||||||||||||| |||||| | ||
Sbjct: 362 agttagtcgcatcgaagctcgtagcgagcagttcgacatgtacatgcagttagatgttgc 421

                                                                       
Query: 256 cactgatgtctacccaatgcatatgggtgacaagttcaccatggttttagctccgacatt 315
            ||||| ||||| || |||| |   |||||||  |||||||||||||||||||| ||  |
Sbjct: 422 tactgaggtctatccgatgcgtgctggtgacagattcaccatggttttagctcctactct 481

                                                                       
Query: 316 gaatctggatgggactccagacactggctactatacacaggctggtaggaaaacacttgc 375
           |||||||||||| ||||| |||||||||| ||| || |||||||| || |||||||||||
Sbjct: 482 gaatctggatggaactccggacactggcttctacacgcaggctggcagaaaaacacttgc 541

                                                           
Query: 376 tgacaagtatgactatgtcatgcacggaaagctttacaagatttcaga 423
           |||||||| ||||||||||||||| |||||||| |||||||| |||||
Sbjct: 542 tgacaagtttgactatgtcatgcatggaaagctctacaagatctcaga 589



 Score =  101 bits (51), Expect = 4e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                        
Query: 460  ggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgcttcaagtgc 519
            ||||||||||||||| ||||||||||| |||||| ||||||| |||||  | || |||||
Sbjct: 1431 ggagatctatgcatcgtttggtggccttctgatgatgctcaagggtgacccctccagtgc 1490

                                                               
Query: 520  tgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgta 570
             |||| | | |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 1491 cgctagctttgagctggaccagaggctgttcctcctcattcgaaaggtgta 1541



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                       
Query: 122 aaaatggcggagcatctcttcgaggacatcttccacgtgaccaggatcgaccctgacggc 181
           |||||||  ||||| || |||||||| ||||||   ||||||||| |||| ||||| || 
Sbjct: 44  aaaatggttgagcacctattcgaggatatcttcactgtgaccaggctcgatcctgatggg 103

                           
Query: 182 aagaagttcgacagag 197
           ||||||||||||||||
Sbjct: 104 aagaagttcgacagag 119
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>dbj|AK068912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001I09, full
           insert sequence
          Length = 1726

 Score =  190 bits (96), Expect = 6e-45
 Identities = 195/228 (85%)
 Strand = Plus / Plus

                                                                       
Query: 196 agttaatcgcattgaagctagaagtgagcagttggacatgtacatgcaattagatatcgc 255
           ||||| |||||| |||||| | || |||||||| |||||||||||||| |||||| | ||
Sbjct: 363 agttagtcgcatcgaagctcgtagcgagcagttcgacatgtacatgcagttagatgttgc 422

                                                                       
Query: 256 cactgatgtctacccaatgcatatgggtgacaagttcaccatggttttagctccgacatt 315
            ||||| ||||| || |||| |   |||||||  |||||||||||||||||||| ||  |
Sbjct: 423 tactgaggtctatccgatgcgtgctggtgacagattcaccatggttttagctcctactct 482

                                                                       
Query: 316 gaatctggatgggactccagacactggctactatacacaggctggtaggaaaacacttgc 375
           |||||||||||| ||||| |||||||||| ||| || |||||||| || |||||||||||
Sbjct: 483 gaatctggatggaactccggacactggcttctacacgcaggctggcagaaaaacacttgc 542

                                                           
Query: 376 tgacaagtatgactatgtcatgcacggaaagctttacaagatttcaga 423
           |||||||| ||||||||||||||| |||||||| |||||||| |||||
Sbjct: 543 tgacaagtttgactatgtcatgcatggaaagctctacaagatctcaga 590



 Score =  101 bits (51), Expect = 4e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                        
Query: 460  ggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgcttcaagtgc 519
            ||||||||||||||| ||||||||||| |||||| ||||||| |||||  | || |||||
Sbjct: 1432 ggagatctatgcatcgtttggtggccttctgatgatgctcaagggtgacccctccagtgc 1491

                                                               
Query: 520  tgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgta 570
             |||| | | |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 1492 cgctagctttgagctggaccagaggctgttcctcctcattcgaaaggtgta 1542



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                       
Query: 122 aaaatggcggagcatctcttcgaggacatcttccacgtgaccaggatcgaccctgacggc 181
           |||||||  ||||| || |||||||| ||||||   ||||||||| |||| ||||| || 
Sbjct: 45  aaaatggttgagcacctattcgaggatatcttcactgtgaccaggctcgatcctgatggg 104

                           
Query: 182 aagaagttcgacagag 197
           ||||||||||||||||
Sbjct: 105 aagaagttcgacagag 120
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>ref|NM_001058415.1| Oryza sativa (japonica cultivar-group) Os03g0845700 (Os03g0845700)
           mRNA, complete cds
          Length = 668

 Score =  151 bits (76), Expect = 5e-33
 Identities = 235/288 (81%)
 Strand = Plus / Plus

                                                                       
Query: 136 tctcttcgaggacatcttccacgtgaccaggatcgaccctgacggcaagaagttcgacag 195
           |||||||||||||||||||   || |||||| |||||||||| ||||||||||| |||||
Sbjct: 106 tctcttcgaggacatcttcactgtcaccaggctcgaccctgatggcaagaagtttgacag 165

                                                                       
Query: 196 agttaatcgcattgaagctagaagtgagcagttggacatgtacatgcaattagatatcgc 255
           ||||  ||| || |||||| | ||||| ||||| || ||||||||||| |||||| | ||
Sbjct: 166 agtttctcgtatcgaagctcgcagtgaccagttcgatatgtacatgcagttagatgttgc 225

                                                                       
Query: 256 cactgatgtctacccaatgcatatgggtgacaagttcaccatggttttagctccgacatt 315
           ||| |||||||| || ||||||   |||||||  || |||||||| || | ||| || ||
Sbjct: 226 cacagatgtctatcctatgcatccaggtgacagatttaccatggtcttggttcctacttt 285

                                                                       
Query: 316 gaatctggatgggactccagacactggctactatacacaggctggtaggaaaacacttgc 375
           |||  | ||||| || ||||| |  | || || |||||||||||| |||||||| || ||
Sbjct: 286 gaacttagatggtaccccagatagcgccttctttacacaggctggcaggaaaactctggc 345

                                                           
Query: 376 tgacaagtatgactatgtcatgcacggaaagctttacaagatttcaga 423
           |||||| ||||| ||||||||||| || |||||||| ||||| |||||
Sbjct: 346 tgacaaatatgagtatgtcatgcatgggaagctttataagatctcaga 393



 Score = 71.9 bits (36), Expect = 4e-09
 Identities = 96/116 (82%)
 Strand = Plus / Plus

                                                                       
Query: 455 aaagtggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgcttca 514
           ||||||||||| |||||||| ||||||||||||||  || |||| || |||||| | || 
Sbjct: 425 aaagtggagatgtatgcatcatttggtggcctcctagtgatgcttaagggtgatccctcc 484

                                                                   
Query: 515 agtgctgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgta 570
           |||||||| ||  | |||||||| || ||||||||||| || || || ||||||||
Sbjct: 485 agtgctgcgaattttgagctggaccagaggctgttcctacttatgcgcaaggtgta 540
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>dbj|AK062622.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-B10, full
           insert sequence
          Length = 668

 Score =  151 bits (76), Expect = 5e-33
 Identities = 235/288 (81%)
 Strand = Plus / Plus

                                                                       
Query: 136 tctcttcgaggacatcttccacgtgaccaggatcgaccctgacggcaagaagttcgacag 195
           |||||||||||||||||||   || |||||| |||||||||| ||||||||||| |||||
Sbjct: 106 tctcttcgaggacatcttcactgtcaccaggctcgaccctgatggcaagaagtttgacag 165

                                                                       
Query: 196 agttaatcgcattgaagctagaagtgagcagttggacatgtacatgcaattagatatcgc 255
           ||||  ||| || |||||| | ||||| ||||| || ||||||||||| |||||| | ||
Sbjct: 166 agtttctcgtatcgaagctcgcagtgaccagttcgatatgtacatgcagttagatgttgc 225

                                                                       
Query: 256 cactgatgtctacccaatgcatatgggtgacaagttcaccatggttttagctccgacatt 315
           ||| |||||||| || ||||||   |||||||  || |||||||| || | ||| || ||
Sbjct: 226 cacagatgtctatcctatgcatccaggtgacagatttaccatggtcttggttcctacttt 285

                                                                       
Query: 316 gaatctggatgggactccagacactggctactatacacaggctggtaggaaaacacttgc 375
           |||  | ||||| || ||||| |  | || || |||||||||||| |||||||| || ||
Sbjct: 286 gaacttagatggtaccccagatagcgccttctttacacaggctggcaggaaaactctggc 345

                                                           
Query: 376 tgacaagtatgactatgtcatgcacggaaagctttacaagatttcaga 423
           |||||| ||||| ||||||||||| || |||||||| ||||| |||||
Sbjct: 346 tgacaaatatgagtatgtcatgcatgggaagctttataagatctcaga 393



 Score = 71.9 bits (36), Expect = 4e-09
 Identities = 96/116 (82%)
 Strand = Plus / Plus

                                                                       
Query: 455 aaagtggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgcttca 514
           ||||||||||| |||||||| ||||||||||||||  || |||| || |||||| | || 
Sbjct: 425 aaagtggagatgtatgcatcatttggtggcctcctagtgatgcttaagggtgatccctcc 484

                                                                   
Query: 515 agtgctgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgta 570
           |||||||| ||  | |||||||| || ||||||||||| || || || ||||||||
Sbjct: 485 agtgctgcgaattttgagctggaccagaggctgttcctacttatgcgcaaggtgta 540
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>gb|DQ244706.1| Zea mays clone 10219 mRNA sequence
          Length = 811

 Score =  115 bits (58), Expect = 3e-22
 Identities = 244/306 (79%)
 Strand = Plus / Plus

                                                                       
Query: 118 aggaaaaatggcggagcatctcttcgaggacatcttccacgtgaccaggatcgaccctga 177
           |||| ||||| | ||||||||||| ||||||| ||||  ||| || ||  ||||||||||
Sbjct: 206 aggagaaatgtctgagcatctctttgaggacaccttcgtcgtcactagactcgaccctga 265

                                                                       
Query: 178 cggcaagaagttcgacagagttaatcgcattgaagctagaagtgagcagttggacatgta 237
            ||||| ||||| || ||||||  |||  |||||||| | ||||||||||| || |||||
Sbjct: 266 tggcaaaaagtttgatagagtttctcgtgttgaagctcgcagtgagcagttagatatgta 325

                                                                       
Query: 238 catgcaattagatatcgccactgatgtctacccaatgcatatgggtgacaagttcaccat 297
            |||||  ||||| | ||||| ||||| || || ||||||   || || || || | |||
Sbjct: 326 tatgcagctagatgttgccacagatgtttatcctatgcatgctggcgagaaatttaacat 385

                                                                       
Query: 298 ggttttagctccgacattgaatctggatgggactccagacactggctactatacacaggc 357
           |||| |||| || ||  ||||| ||||||| || ||||| |||||||||||||| |||||
Sbjct: 386 ggttatagcgcctactctgaatttggatggcaccccagatactggctactatactcaggc 445

                                                                       
Query: 358 tggtaggaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           ||| || ||||| || || ||||| ||||| || |||||||| || ||||||||||| ||
Sbjct: 446 tggcagaaaaactctggcagacaattatgagtacgtcatgcaagggaagctttacaaaat 505

                 
Query: 418 ttcaga 423
            |||||
Sbjct: 506 ctcaga 511
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>gb|AY106067.2| Zea mays PCO144871 mRNA sequence
          Length = 777

 Score =  113 bits (57), Expect = 1e-21
 Identities = 234/293 (79%)
 Strand = Plus / Plus

                                                                       
Query: 131 gagcatctcttcgaggacatcttccacgtgaccaggatcgaccctgacggcaagaagttc 190
           ||||||||||| ||||||| ||||  ||| || ||  |||||||||| ||||| ||||| 
Sbjct: 178 gagcatctctttgaggacaccttcgtcgtcactagactcgaccctgatggcaaaaagttt 237

                                                                       
Query: 191 gacagagttaatcgcattgaagctagaagtgagcagttggacatgtacatgcaattagat 250
           || ||||||  |||  |||||||| | ||||||||||| || ||||| |||||  |||||
Sbjct: 238 gatagagtttctcgtgttgaagctcgcagtgagcagttagatatgtatatgcagctagat 297

                                                                       
Query: 251 atcgccactgatgtctacccaatgcatatgggtgacaagttcaccatggttttagctccg 310
            | ||||| ||||| || || ||||||   || || || || | ||||||| |||| || 
Sbjct: 298 gttgccacagatgtttatcctatgcatgctggcgagaaatttaacatggttatagcgcct 357

                                                                       
Query: 311 acattgaatctggatgggactccagacactggctactatacacaggctggtaggaaaaca 370
           ||  ||||| ||||||| || ||||| |||||||||||||| |||||||| || ||||| 
Sbjct: 358 actctgaatttggatggcaccccagatactggctactatactcaggctggcagaaaaact 417

                                                                
Query: 371 cttgctgacaagtatgactatgtcatgcacggaaagctttacaagatttcaga 423
           || || ||||| ||||| || |||||||| || ||||||||||| || |||||
Sbjct: 418 ctggcagacaattatgagtacgtcatgcaagggaagctttacaaaatctcaga 470



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 453 ctaaagtggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgctt 512
           ||||||||||||| |||||||| || || || || || ||| ||||||  |||||  |||
Sbjct: 494 ctaaagtggagatgtatgcatcgttcggcgggcttcttatgctgctcaggggtgaccctt 553

                                                                      
Query: 513 caagtgctgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgtaa 571
           | | ||| |||| | | ||||| ||||| ||||| || || |||||||| |||||||||
Sbjct: 554 ccactgccgctagctttgagcttgatcagaggctctttctgctcatccgcaaggtgtaa 612
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  105 bits (53), Expect = 3e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                            
Query: 196      agttaatcgcattgaagctagaagtgagcagttggacatgtacatgcaattagatatcgc 255
                ||||| |||||| |||||| | || |||||||| |||||||||||||| |||||| | ||
Sbjct: 28791285 agttagtcgcatcgaagctcgtagcgagcagttcgacatgtacatgcagttagatgttgc 28791226

                                                                            
Query: 256      cactgatgtctacccaatgcatatgggtgacaagttcaccatggttttagctccgacatt 315
                 ||||| ||||| || |||| |   |||||||  |||||||||||||||||||| ||  |
Sbjct: 28791225 tactgaggtctatccgatgcgtgctggtgacagattcaccatggttttagctcctactct 28791166

                                             
Query: 316      gaatctggatgggactccagacactggct 344
                |||||||||||| ||||| ||||||||||
Sbjct: 28791165 gaatctggatggaactccggacactggct 28791137



 Score =  101 bits (51), Expect = 4e-18
 Identities = 96/111 (86%)
 Strand = Plus / Minus

                                                                            
Query: 460      ggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgcttcaagtgc 519
                ||||||||||||||| ||||||||||| |||||| ||||||| |||||  | || |||||
Sbjct: 28789876 ggagatctatgcatcgtttggtggccttctgatgatgctcaagggtgacccctccagtgc 28789817

                                                                   
Query: 520      tgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgta 570
                 |||| | | |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 28789816 cgctagctttgagctggaccagaggctgttcctcctcattcgaaaggtgta 28789766



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                            
Query: 353      caggctggtaggaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttac 412
                |||||||| || ||||||||||||||||||| ||||||||||||||| |||||||| |||
Sbjct: 28790788 caggctggcagaaaaacacttgctgacaagtttgactatgtcatgcatggaaagctctac 28790729

                           
Query: 413      aagatttcaga 423
                ||||| |||||
Sbjct: 28790728 aagatctcaga 28790718



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                            
Query: 122      aaaatggcggagcatctcttcgaggacatcttccacgtgaccaggatcgaccctgacggc 181
                |||||||  ||||| || |||||||| ||||||   ||||||||| |||| ||||| || 
Sbjct: 28791603 aaaatggttgagcacctattcgaggatatcttcactgtgaccaggctcgatcctgatggg 28791544

                                
Query: 182      aagaagttcgacagag 197
                ||||||||||||||||
Sbjct: 28791543 aagaagttcgacagag 28791528
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score =  105 bits (53), Expect = 3e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                         
Query: 196   agttaatcgcattgaagctagaagtgagcagttggacatgtacatgcaattagatatcgc 255
             ||||| |||||| |||||| | || |||||||| |||||||||||||| |||||| | ||
Sbjct: 99060 agttagtcgcatcgaagctcgtagcgagcagttcgacatgtacatgcagttagatgttgc 99001

                                                                         
Query: 256   cactgatgtctacccaatgcatatgggtgacaagttcaccatggttttagctccgacatt 315
              ||||| ||||| || |||| |   |||||||  |||||||||||||||||||| ||  |
Sbjct: 99000 tactgaggtctatccgatgcgtgctggtgacagattcaccatggttttagctcctactct 98941

                                          
Query: 316   gaatctggatgggactccagacactggct 344
             |||||||||||| ||||| ||||||||||
Sbjct: 98940 gaatctggatggaactccggacactggct 98912



 Score =  101 bits (51), Expect = 4e-18
 Identities = 96/111 (86%)
 Strand = Plus / Minus

                                                                         
Query: 460   ggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgcttcaagtgc 519
             ||||||||||||||| ||||||||||| |||||| ||||||| |||||  | || |||||
Sbjct: 97651 ggagatctatgcatcgtttggtggccttctgatgatgctcaagggtgacccctccagtgc 97592

                                                                
Query: 520   tgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgta 570
              |||| | | |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 97591 cgctagctttgagctggaccagaggctgttcctcctcattcgaaaggtgta 97541



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                         
Query: 353   caggctggtaggaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttac 412
             |||||||| || ||||||||||||||||||| ||||||||||||||| |||||||| |||
Sbjct: 98563 caggctggcagaaaaacacttgctgacaagtttgactatgtcatgcatggaaagctctac 98504

                        
Query: 413   aagatttcaga 423
             ||||| |||||
Sbjct: 98503 aagatctcaga 98493



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                         
Query: 122   aaaatggcggagcatctcttcgaggacatcttccacgtgaccaggatcgaccctgacggc 181
             |||||||  ||||| || |||||||| ||||||   ||||||||| |||| ||||| || 
Sbjct: 99378 aaaatggttgagcacctattcgaggatatcttcactgtgaccaggctcgatcctgatggg 99319

                             
Query: 182   aagaagttcgacagag 197
             ||||||||||||||||
Sbjct: 99318 aagaagttcgacagag 99303
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>gb|DQ244414.1| Zea mays clone 7318 mRNA sequence
          Length = 744

 Score = 97.6 bits (49), Expect = 7e-17
 Identities = 232/293 (79%)
 Strand = Plus / Plus

                                                                       
Query: 131 gagcatctcttcgaggacatcttccacgtgaccaggatcgaccctgacggcaagaagttc 190
           ||||||||||| ||||||| ||||  ||| || ||  |||||||||| ||||| ||||| 
Sbjct: 123 gagcatctctttgaggacaccttcgtcgtcactagactcgaccctgatggcaaaaagttt 182

                                                                       
Query: 191 gacagagttaatcgcattgaagctagaagtgagcagttggacatgtacatgcaattagat 250
           || ||||||  |||  |||||||| | || |||||||| || ||||| |||||  | |||
Sbjct: 183 gatagagtttctcgtgttgaagctcgcagcgagcagttagatatgtatatgcagcttgat 242

                                                                       
Query: 251 atcgccactgatgtctacccaatgcatatgggtgacaagttcaccatggttttagctccg 310
            | ||||| ||||| || || ||||||   || || || || | ||||||| |||| || 
Sbjct: 243 gttgccacagatgtttatcctatgcatgctggcgagaaatttaacatggttatagcgcct 302

                                                                       
Query: 311 acattgaatctggatgggactccagacactggctactatacacaggctggtaggaaaaca 370
           ||  ||||| ||||||| || || ||||||||||||||||| |||||||| || ||||| 
Sbjct: 303 actctgaatttggatggcacccctgacactggctactatactcaggctggcagaaaaact 362

                                                                
Query: 371 cttgctgacaagtatgactatgtcatgcacggaaagctttacaagatttcaga 423
           || || ||||| ||||| || |||||||| || ||||||||||| || |||||
Sbjct: 363 ctggcagacaattatgagtacgtcatgcaagggaagctttacaaaatctcaga 415



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 453 ctaaagtggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgctt 512
           ||||||||||||| |||||||| || || || || || ||| ||||||  |||||  |||
Sbjct: 439 ctaaagtggagatgtatgcatcgttcggagggcttcttatgctgctcaggggtgaccctt 498

                                                                      
Query: 513 caagtgctgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgtaa 571
           | | ||| |||| | | ||||| ||||| ||||| || || |||||||| |||||||||
Sbjct: 499 ccactgccgctagctttgagcttgatcagaggctctttctgctcatccgcaaggtgtaa 557
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>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
              sequence
          Length = 156606

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                          
Query: 353    caggctggtaggaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttac 412
              |||||||| |||||||| || |||||||| ||||| ||||||||||| || |||||||| 
Sbjct: 138709 caggctggcaggaaaactctggctgacaaatatgagtatgtcatgcatgggaagctttat 138650

                         
Query: 413    aagatttcaga 423
              ||||| |||||
Sbjct: 138649 aagatctcaga 138639



 Score = 67.9 bits (34), Expect = 6e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                          
Query: 136    tctcttcgaggacatcttccacgtgaccaggatcgaccctgacggcaagaagttcgacag 195
              |||||||||||||||||||   || |||||| |||||||||| ||||||||||| |||||
Sbjct: 139649 tctcttcgaggacatcttcactgtcaccaggctcgaccctgatggcaagaagtttgacag 139590

                
Query: 196    ag 197
              ||
Sbjct: 139589 ag 139588



 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 91/111 (81%)
 Strand = Plus / Minus

                                                                          
Query: 460    ggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgcttcaagtgc 519
              |||||| |||||||| ||||||||||||||  || |||| || |||||| | || |||||
Sbjct: 138064 ggagatgtatgcatcatttggtggcctcctagtgatgcttaagggtgatccctccagtgc 138005

                                                                 
Query: 520    tgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgta 570
              ||| ||  | |||||||| || ||||||||||| || || || ||||||||
Sbjct: 138004 tgcgaattttgagctggaccagaggctgttcctacttatgcgcaaggtgta 137954



 Score = 50.1 bits (25), Expect = 0.014
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                          
Query: 209    gaagctagaagtgagcagttggacatgtacatgcaattagatatcgccactgatgtctac 268
              |||||| | ||||| ||||| || ||||||||||| |||||| | ||||| |||||||| 
Sbjct: 139046 gaagctcgcagtgaccagttcgatatgtacatgcagttagatgttgccacagatgtctat 138987

                       
Query: 269    ccaatgcat 277
              || ||||||
Sbjct: 138986 cctatgcat 138978
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                            
Query: 353      caggctggtaggaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttac 412
                |||||||| |||||||| || |||||||| ||||| ||||||||||| || |||||||| 
Sbjct: 35350020 caggctggcaggaaaactctggctgacaaatatgagtatgtcatgcatgggaagctttat 35349961

                           
Query: 413      aagatttcaga 423
                ||||| |||||
Sbjct: 35349960 aagatctcaga 35349950



 Score = 67.9 bits (34), Expect = 6e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                            
Query: 136      tctcttcgaggacatcttccacgtgaccaggatcgaccctgacggcaagaagttcgacag 195
                |||||||||||||||||||   || |||||| |||||||||| ||||||||||| |||||
Sbjct: 35350960 tctcttcgaggacatcttcactgtcaccaggctcgaccctgatggcaagaagtttgacag 35350901

                  
Query: 196      ag 197
                ||
Sbjct: 35350900 ag 35350899



 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 91/111 (81%)
 Strand = Plus / Minus

                                                                            
Query: 460      ggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgcttcaagtgc 519
                |||||| |||||||| ||||||||||||||  || |||| || |||||| | || |||||
Sbjct: 35349375 ggagatgtatgcatcatttggtggcctcctagtgatgcttaagggtgatccctccagtgc 35349316

                                                                   
Query: 520      tgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgta 570
                ||| ||  | |||||||| || ||||||||||| || || || ||||||||
Sbjct: 35349315 tgcgaattttgagctggaccagaggctgttcctacttatgcgcaaggtgta 35349265



 Score = 50.1 bits (25), Expect = 0.014
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                            
Query: 209      gaagctagaagtgagcagttggacatgtacatgcaattagatatcgccactgatgtctac 268
                |||||| | ||||| ||||| || ||||||||||| |||||| | ||||| |||||||| 
Sbjct: 35350357 gaagctcgcagtgaccagttcgatatgtacatgcagttagatgttgccacagatgtctat 35350298

                         
Query: 269      ccaatgcat 277
                || ||||||
Sbjct: 35350297 cctatgcat 35350289
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>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete
              sequence
          Length = 116443

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                          
Query: 353    caggctggtaggaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttac 412
              |||||||| |||||||| || |||||||| ||||| ||||||||||| || |||||||| 
Sbjct: 108506 caggctggcaggaaaactctggctgacaaatatgagtatgtcatgcatgggaagctttat 108565

                         
Query: 413    aagatttcaga 423
              ||||| |||||
Sbjct: 108566 aagatctcaga 108576



 Score = 67.9 bits (34), Expect = 6e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                          
Query: 136    tctcttcgaggacatcttccacgtgaccaggatcgaccctgacggcaagaagttcgacag 195
              |||||||||||||||||||   || |||||| |||||||||| ||||||||||| |||||
Sbjct: 107566 tctcttcgaggacatcttcactgtcaccaggctcgaccctgatggcaagaagtttgacag 107625

                
Query: 196    ag 197
              ||
Sbjct: 107626 ag 107627



 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 91/111 (81%)
 Strand = Plus / Plus

                                                                          
Query: 460    ggagatctatgcatcttttggtggcctcctgatgttgctcaaaggtgatgcttcaagtgc 519
              |||||| |||||||| ||||||||||||||  || |||| || |||||| | || |||||
Sbjct: 109151 ggagatgtatgcatcatttggtggcctcctagtgatgcttaagggtgatccctccagtgc 109210

                                                                 
Query: 520    tgctaacctcgagctggatcaaaggctgttcctcctcatccgaaaggtgta 570
              ||| ||  | |||||||| || ||||||||||| || || || ||||||||
Sbjct: 109211 tgcgaattttgagctggaccagaggctgttcctacttatgcgcaaggtgta 109261



 Score = 50.1 bits (25), Expect = 0.014
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                          
Query: 209    gaagctagaagtgagcagttggacatgtacatgcaattagatatcgccactgatgtctac 268
              |||||| | ||||| ||||| || ||||||||||| |||||| | ||||| |||||||| 
Sbjct: 108169 gaagctcgcagtgaccagttcgatatgtacatgcagttagatgttgccacagatgtctat 108228

                       
Query: 269    ccaatgcat 277
              || ||||||
Sbjct: 108229 cctatgcat 108237
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>gb|DQ245729.1| Zea mays clone 19979 mRNA sequence
          Length = 698

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 364 gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           ||||||||||||||| ||||| || || || |||||||| ||||||||||||||
Sbjct: 319 gaaaacacttgctgataagtacgaatacgttatgcacgggaagctttacaagat 372
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>ref|NM_115822.1| Arabidopsis thaliana DNA-directed RNA polymerase (AT3G59600) mRNA,
           complete cds
          Length = 745

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 364 gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           |||||||||||| || |||||||| ||  |||||||||| ||||||||||||||
Sbjct: 377 gaaaacacttgcagataagtatgaatacatcatgcacgggaagctttacaagat 430
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>gb|BT008531.1| Arabidopsis thaliana clone U51390 unknown protein (At3g59600) mRNA,
           complete cds
          Length = 472

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 364 gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           |||||||||||| || |||||||| ||  |||||||||| ||||||||||||||
Sbjct: 246 gaaaacacttgcagataagtatgaatacatcatgcacgggaagctttacaagat 299
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>gb|AY086002.1| Arabidopsis thaliana clone 20583 mRNA, complete sequence
          Length = 747

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 364 gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           |||||||||||| || |||||||| ||  |||||||||| ||||||||||||||
Sbjct: 378 gaaaacacttgcagataagtatgaatacatcatgcacgggaagctttacaagat 431
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>emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, BAC clone T16L24
          Length = 91851

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                   
Query: 364   gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
             |||||||||||| || |||||||| ||  |||||||||| ||||||||||||||
Sbjct: 40563 gaaaacacttgcagataagtatgaatacatcatgcacgggaagctttacaagat 40616
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>dbj|AK119016.1| Arabidopsis thaliana At3g59600 mRNA for unknown protein, complete
           cds, clone: RAFL21-34-F06
          Length = 690

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 364 gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           |||||||||||| || |||||||| ||  |||||||||| ||||||||||||||
Sbjct: 358 gaaaacacttgcagataagtatgaatacatcatgcacgggaagctttacaagat 411
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>emb|BX826263.1|CNS0A7MO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL95ZA05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 654

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 364 gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           |||||||||||| || |||||||| ||  |||||||||| ||||||||||||||
Sbjct: 335 gaaaacacttgcagataagtatgaatacatcatgcacgggaagctttacaagat 388
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>emb|AJ538728.1|NTA538728 Nicotiana tabacum cDNA-AFLP-fragment BC4-M42-042
          Length = 172

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 199 taatcgcattgaagctagaagtgagcagttggacatgtacatgc 242
           |||||||||||||||  | ||||||||||| |||||||||||||
Sbjct: 172 taatcgcattgaagcacgtagtgagcagtttgacatgtacatgc 129
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>dbj|AK227855.1| Arabidopsis thaliana mRNA for RNA polymerase I, II and III 16.5 kDa
           subunit, complete cds, clone: RAFL14-42-M04
          Length = 646

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 364 gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           |||||||||||| || |||||||| ||  | |||||||| ||||||||||||||
Sbjct: 318 gaaaacacttgccgataagtatgaatacataatgcacgggaagctttacaagat 371
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>ref|NM_104303.1| Arabidopsis thaliana ATRPABC16.5; DNA-directed RNA polymerase
           (ATRPABC16.5) mRNA, complete cds
          Length = 766

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 364 gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           |||||||||||| || |||||||| ||  | |||||||| ||||||||||||||
Sbjct: 353 gaaaacacttgccgataagtatgaatacataatgcacgggaagctttacaagat 406
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>gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 genomic sequence, complete
             sequence
          Length = 143186

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                   
Query: 364   gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
             |||||||||||| || |||||||| ||  | |||||||| ||||||||||||||
Sbjct: 27531 gaaaacacttgccgataagtatgaatacataatgcacgggaagctttacaagat 27584
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>gb|AY086894.1| Arabidopsis thaliana clone 29173 mRNA, complete sequence
          Length = 766

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 364 gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           |||||||||||| || |||||||| ||  | |||||||| ||||||||||||||
Sbjct: 353 gaaaacacttgccgataagtatgaatacataatgcacgggaagctttacaagat 406
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>gb|BT004791.1| Arabidopsis thaliana At1g54250 gene, complete cds
          Length = 441

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 364 gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           |||||||||||| || |||||||| ||  | |||||||| ||||||||||||||
Sbjct: 246 gaaaacacttgccgataagtatgaatacataatgcacgggaagctttacaagat 299
to top
>gb|AF017074.1|AF017074 Arabidopsis thaliana RNA polymerase I, II and III 16.5 kDa subunit
           (AtRPABC16.5) mRNA, complete cds
          Length = 633

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 364 gaaaacacttgctgacaagtatgactatgtcatgcacggaaagctttacaagat 417
           |||||||||||| || |||||||| ||  | |||||||| ||||||||||||||
Sbjct: 292 gaaaacacttgccgataagtatgaatacataatgcacgggaagctttacaagat 345
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>emb|Z21510.1|TATRINF4A T.aestivum translation initiation factor 4A
          Length = 1715

 Score = 50.1 bits (25), Expect = 0.014
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 34 tccccacatcgcctccgctcccacgccgc 62
          ||||| |||||||||||||||||||||||
Sbjct: 18 tcccctcatcgcctccgctcccacgccgc 46
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>gb|DQ381262.1| Ictalurus punctatus clone SGA12 SWAP-70 protein isoform 4-like
           protein mRNA, partial cds
          Length = 663

 Score = 48.1 bits (24), Expect = 0.054
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 13  ctgtttttcctctcctgccagtcc 36
           ||||||||||||||||||||||||
Sbjct: 367 ctgtttttcctctcctgccagtcc 344
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>gb|AC186981.7| Canis Familiaris chromosome 6, clone XX-288M21, complete sequence
          Length = 191895

 Score = 44.1 bits (22), Expect = 0.84
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 460    ggagatctatgcatcttttggtggcc 485
              ||||||||||||||||| ||||||||
Sbjct: 182759 ggagatctatgcatcttgtggtggcc 182784
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>gb|DQ213335.1| Taeniopygia guttata clone 0062P0003E01 RNA polymerase II
           polypeptide H-like mRNA, complete sequence
          Length = 894

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 141 tcgaggacatcttccacgtgaccaggatcgaccctgacggcaagaagttcgac 193
           |||||||||||||| ||||||     |||||||| || |||||||||||||||
Sbjct: 59  tcgaggacatcttcgacgtgaaggacatcgacccggagggcaagaagttcgac 111
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>emb|AL389915.19| Human DNA sequence from clone RP11-438P9 on chromosome 9 Contains a
              ribosomal protein S16 (RPS16) pseudogene, a peptidylprolyl
              isomerase A (cyclophilin A) (PPIA) pseudogene and a CpG
              island, complete sequence
          Length = 199601

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 258    ctgatgtctacccaatgcata 278
              |||||||||||||||||||||
Sbjct: 174241 ctgatgtctacccaatgcata 174221
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>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
             complete sequence
          Length = 691920

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 545   ctgttcctcctcatccgaaag 565
             |||||||||||||||||||||
Sbjct: 86329 ctgttcctcctcatccgaaag 86349
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>gb|AC074228.9|AC074228 Arabidopsis thaliana chromosome 1 BAC T7O23 genomic sequence, complete
             sequence
          Length = 72832

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 287   aagttcaccatggttttagct 307
             |||||||||||||||||||||
Sbjct: 46739 aagttcaccatggttttagct 46719
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>gb|AC073641.3| Homo sapiens BAC clone RP11-368E14 from 2, complete sequence
          Length = 197709

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 353    caggctggtaggaaaacactt 373
              |||||||||||||||||||||
Sbjct: 163280 caggctggtaggaaaacactt 163260
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>ref|NM_207748.1| Eremothecium gossypii AAL147Cp (AAL147C), mRNA
          Length = 5442

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 545  ctgttcctcctcatccgaaag 565
            |||||||||||||||||||||
Sbjct: 5040 ctgttcctcctcatccgaaag 5020
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>emb|AL935270.6| Mouse DNA sequence from clone RP23-391A14 on chromosome 2, complete
            sequence
          Length = 127274

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 18   tttcctctcctgccagtcccc 38
            |||||||||||||||||||||
Sbjct: 7883 tttcctctcctgccagtcccc 7863
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>gb|AY285246.1| Sus scrofa clone UMNp1098.gcg microsatellite sequence
          Length = 720

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 9   ccctctgtttttcctctcctgccagtccc 37
           ||||||||| ||||||||||||| |||||
Sbjct: 419 ccctctgttcttcctctcctgcctgtccc 447


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 135,874,140
Number of extensions: 6711342
Number of successful extensions: 151033
Number of sequences better than 10.0: 38
Number of HSP's gapped: 151030
Number of HSP's successfully gapped: 65
Length of query: 884
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 862
Effective length of database: 18,508,616,841
Effective search space: 15954427716942
Effective search space used: 15954427716942
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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