ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf39l16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK073387:Os03g0238700 453 e-127
2AK101983:Os01g0167800 32 1.5
3AK109356: 30 5.7
4AK106919:Os01g0819700 30 5.7
5AK059227:Os01g0819700 30 5.7
6AK100254:Os03g0661500 29 9.6
7AK072351:Os05g0195400 29 9.6

>AK073387:Os03g0238700 |
          Length = 318
 Score =  453 bits (1165), Expect = e-127
 Identities = 218/291 (74%), Positives = 243/291 (83%), Gaps = 20/291 (6%)
 Frame = +2

Query: 86  GDNVRLLIPGFLSPETCKELEFVHWSCGTAGYRPSVVSTSLPHLAATGCGHLLLPFVPIR 265
           G+++R  + GFLSPETCKELEFVH SCGTAGYRPSVVSTSLPHLAATGCGHLLLPFVP+R
Sbjct: 15  GEHLRFHLRGFLSPETCKELEFVHRSCGTAGYRPSVVSTSLPHLAATGCGHLLLPFVPVR 74

Query: 266 ERLRDAVESFFSCHFDLFVEFTGLVSWCKGASIGWHSDDNKPYLRQRAFT---------- 415
           ERLRDAVES FSCHFDLF+EFTGL+SWCKGASIGWHSDDNKPYLRQRAFT          
Sbjct: 75  ERLRDAVESAFSCHFDLFIEFTGLISWCKGASIGWHSDDNKPYLRQRAFTAVCYLNDHGK 134

Query: 416 ----------DGEPSSVIPVAGDAVIYTADNRNVHCVDEVTEGERLTLTLWFTRDSTFDE 565
                     DGEPS + PVAGD VIYTADN N HCVDEVTEGERLTLTLWFTRDS +DE
Sbjct: 135 DYKGGILQFQDGEPSFITPVAGDVVIYTADNSNTHCVDEVTEGERLTLTLWFTRDSAYDE 194

Query: 566 DPKLLSFLSQASLSYEPADQNSYIPLPASDNMYWFSYGQSGFDIRCARIHILGFNFRASS 745
           DPKLLSFLSQ SL+YEP  Q+SYIPLPASD MYWF+Y  SGFD+RCAR+HILGF+F +S 
Sbjct: 195 DPKLLSFLSQTSLNYEPVHQSSYIPLPASDIMYWFAYDHSGFDVRCARVHILGFSFHSSI 254

Query: 746 DEDSKSTSAAPADDLIELLGKPLRIGRGDDVFGKIFANSLHALQVVQFYYW 898
           DED+KS + A  DD IELLGKP+R+GRGDDVF K+FAN LHALQV  ++++
Sbjct: 255 DEDNKSVAPA-EDDPIELLGKPVRLGRGDDVFDKVFANGLHALQVSTYFHF 304



to top

>AK101983:Os01g0167800 |
          Length = 792

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
 Frame = +2

Query: 533 LWFTRDSTFDE-----------DPKLLSFLSQASLSYEPADQNSYIPLPASDNMYWFSYG 679
           LWF     FDE            P +LS  +Q  L+        +I +P  D+M W SY 
Sbjct: 30  LWFKAKPAFDELIDAVYKKLGWVPTMLSIRAQGRLNVGGGAHRHFIMVPIDDDMSWSSYV 89

Query: 680 QSGFD 694
           ++ F+
Sbjct: 90  KAVFN 94



to top

>AK109356: |
          Length = 382

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +2

Query: 122 SPETCKELEFVHWSCGTAGYRPSVVSTS 205
           SP T +ELE    S G++GY+PS VS+S
Sbjct: 175 SPLTSQELEASSSSMGSSGYQPSGVSSS 202



to top

>AK106919:Os01g0819700 |
          Length = 467

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +2

Query: 122 SPETCKELEFVHWSCGTAGYRPSVVSTS 205
           SP T +ELE    S G++GY+PS VS+S
Sbjct: 175 SPLTSQELEASSSSMGSSGYQPSGVSSS 202



to top

>AK059227:Os01g0819700 |
          Length = 375

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +2

Query: 122 SPETCKELEFVHWSCGTAGYRPSVVSTS 205
           SP T +ELE    S G++GY+PS VS+S
Sbjct: 175 SPLTSQELEASSSSMGSSGYQPSGVSSS 202



to top

>AK100254:Os03g0661500 |
          Length = 427

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -2

Query: 873 RACKLLANILPKTSSPLPIRSGFPSN 796
           R  +LLA + P  + PLP+++GFP++
Sbjct: 12  RLGRLLAALRPARAGPLPVQTGFPTS 37



to top

>AK072351:Os05g0195400 |
          Length = 158

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 205 AAASGCHRLRPPTPPL 252
           AAA+G HRL PP PP+
Sbjct: 103 AAAAGLHRLHPPPPPV 118


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 41,006,034
Number of extensions: 946094
Number of successful extensions: 2742
Number of sequences better than 10.0: 7
Number of HSP's gapped: 2725
Number of HSP's successfully gapped: 7
Length of query: 487
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 382
Effective length of database: 11,195,550
Effective search space: 4276700100
Effective search space used: 4276700100
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top