No.
Definition
Score (bits)
E Value
1 ref|NM_001056036.1| Oryza sativa (japonica cultivar-group) Os03g...
391
e-105
2 dbj|AK073387.1| Oryza sativa (japonica cultivar-group) cDNA clon...
391
e-105
3 gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare str...
238
5e-59
4 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
238
5e-59
5 gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC...
121
8e-24
6 gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece
113
2e-21
7 dbj|AP004247.2| Homo sapiens genomic DNA, chromosome 11q, clone:...
50
0.023
8 ref|XM_001092455.1| PREDICTED: Macaca mulatta similar to adrenoc...
46
0.36
9 emb|BX538351.1| Cryptosporidium parvum chromosome 6, complete se...
44
1.4
10 ref|XM_001090610.1| PREDICTED: Macaca mulatta similar to Extrace...
42
5.6
11 emb|CT025859.8| Zebrafish DNA sequence from clone DKEY-238O13 in...
42
5.6
12 gb|AC183795.2| Pan troglodytes BAC clone CH251-631L8 from chromo...
42
5.6
13 gb|AC160142.4| Pan troglodytes BAC clone CH251-350E17 from chrom...
42
5.6
14 gb|CP000302.1| Shewanella denitrificans OS217, complete genome
42
5.6
15 gb|AC154110.3| Ornithorhynchus anatinus BAC clone OABb-462P24 fr...
42
5.6
16 gb|AC151748.1| Ornithorhynchus anatinus chromosome UNK clone OAB...
42
5.6
17 gb|AC151757.1| Ornithorhynchus anatinus chromosome UNK clone OAB...
42
5.6
18 gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete se...
42
5.6
19 gb|AC127486.3| Homo sapiens chromosome 15, clone CTD-2012K22, co...
42
5.6
20 gb|AC119149.2| Oryza sativa (japonica cultivar-group) chromosome...
42
5.6
21 emb|CR352242.13| Zebrafish DNA sequence from clone CH211-218G4 i...
42
5.6
22 emb|CT009533.6| Platypus DNA sequence from clone XX-522J9, compl...
42
5.6
23 emb|BX936293.11| Platypus DNA sequence from clone XX-516O5, comp...
42
5.6
24 gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genom...
42
5.6
25 gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, co...
42
5.6
26 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
42
5.6
27 emb|CR933557.2| Human DNA sequence from clone XX-FW1777B19L on c...
42
5.6
28 emb|BX537318.11| Human DNA sequence from clone CITF22-92A6 on ch...
42
5.6
29 gb|AC087456.3| Homo sapiens chromosome 15, clone RP11-26A13, com...
42
5.6
30 emb|AL138823.14| Human DNA sequence from clone RP11-64J21 on chr...
42
5.6
31 emb|AL136079.21| Human DNA sequence from clone RP3-358E10 on chr...
42
5.6
32 emb|AL133457.8| Human DNA sequence from clone RP1-149C7 on chrom...
42
5.6
33 gb|AC019322.8| Homo sapiens chromosome 15, clone RP11-382B18, co...
42
5.6
34 gb|AC021754.6| Homo sapiens chromosome 15 clone RP11-263I19 map ...
42
5.6
35 gb|AC018512.6| Homo sapiens chromosome 15 clone RP11-296A16 map ...
42
5.6
36 gb|AC011330.8| Homo sapiens chromosome 15 clone RP11-315A19 map ...
42
5.6
37 gb|AC016135.3| Homo sapiens chromosome 15 clone RP11-86F12 map 1...
42
5.6
38 emb|BX957247.4| Zebrafish DNA sequence from clone DKEYP-117H10 i...
42
5.6
39 gb|AC123768.8| Homo sapiens chromosome 15, clone RP11-1000B6, co...
42
5.6
40 gb|AC150980.20| Medicago truncatula clone mth2-165j9, complete s...
42
5.6
41 gb|AC026150.7| Homo sapiens chromosome 15, clone RP11-605N15, co...
42
5.6
42 gb|AC135983.4| Homo sapiens chromosome 15, clone RP11-632K20, co...
42
5.6
43 gb|AC094107.3| Homo sapiens chromosome 5 clone RP11-48L3, comple...
42
5.6
44 gb|AC126610.12| Homo sapiens chromosome 15, clone RP11-733O21, c...
42
5.6
45 gb|AC111164.6| Homo sapiens chromosome 15, clone RP11-1109N12, c...
42
5.6
46 gb|AC055876.16| Homo sapiens chromosome 15, clone RP11-578F21, c...
42
5.6
47 gb|AC159742.1| Ornithorhynchus anatinus chromosome UNK clone OAB...
42
5.6
48 emb|AL672230.6| Mouse DNA sequence from clone RP23-56L5 on chrom...
42
5.6
49 gb|AC005753.1|AC005753 Homo sapiens chromosome 5, P1 clone 254f1...
42
5.6
50 emb|AL928728.9| Zebrafish DNA sequence from clone CH211-212E24, ...
42
5.6
51 gb|AC152002.2| Ornithorhynchus anatinus chromosome UNK clone OAB...
42
5.6
52 gb|AC124094.4| Homo sapiens chromosome 15, clone RP11-1203N1, co...
42
5.6
>ref|NM_001056036.1 | Oryza sativa (japonica cultivar-group) Os03g0238700 (Os03g0238700)
mRNA, complete cds
Length = 2342
Score = 391 bits (197), Expect = e-105
Identities = 275/301 (91%)
Strand = Plus / Plus
Query: 116 ttcctctcccccgagacctgcaaggagctggagttcgtccactggagctgcgggacggcg 175
||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 98 ttcctctccccggagacctgcaaggagctggagttcgtgcaccggagctgcggcacggcc 157
Query: 176 gggtaccggccttcggtggtgtctacatcgctgccgcatctggctgccaccggctgcggc 235
|||||||| |||||||||||||| || ||||| ||||| |||||||||||||||||||||
Sbjct: 158 gggtaccgcccttcggtggtgtcgacgtcgcttccgcacctggctgccaccggctgcggc 217
Query: 236 cacctactcctccccttcgtgcccatccgcgagcgactccgcgatgccgtcgagtccttc 295
||||| |||||||| ||||| ||| |||||||||| |||||||| ||||||||||| |
Sbjct: 218 cacctcctcctcccgttcgtccccgtccgcgagcggctccgcgacgccgtcgagtcggcc 277
Query: 296 ttctcctgccacttcgacctcttcgtcgagttcaccggactagtcagttggtgcaagggt 355
|||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||
Sbjct: 278 ttctcctgccacttcgacctcttcatcgagttcaccgggctcatcagttggtgcaaggga 337
Query: 356 gcttctattggatggcacagtgacgacaacaaaccttatcttaggcaaagagccttcacg 415
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 338 gcttctattgggtggcacagtgatgacaacaaaccttatcttaggcaaagagccttcacg 397
Query: 416 g 416
|
Sbjct: 398 g 398
Score = 238 bits (120), Expect = 5e-59
Identities = 264/312 (84%)
Strand = Plus / Plus
Query: 415 ggatggtgaaccctcctctgttattccagttgccggtgatgctgtcatctacactgctga 474
|||||||||||| |||| | ||| ||||||||| ||||||| ||||||||||||||| ||
Sbjct: 457 ggatggtgaaccttcctttattactccagttgctggtgatgttgtcatctacactgcaga 516
Query: 475 taatcgtaatgtgcattgtgtagatgaggtaactgagggtgaaaggctcacgcttactct 534
|||| ||||| ||||||||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 517 taatagtaatacccattgtgtagatgaggtgactgaaggtgaaagactcaccctaactct 576
Query: 535 ttggttcaccagagacagtacctttgatgaggatccaaagctccttagttttctctccca 594
||||||||||||||||||| | | ||| ||||| |||||||||||| ||||| || ||
Sbjct: 577 ttggttcaccagagacagtgcttatgacgaggacccaaagctcctttcctttctttctca 636
Query: 595 ggcatcactgagctatgagccagctgatcagaactcttacattcctctgccagcctcaga 654
| ||||||||| |||||| |||| | |||||| ||||| |||||| |||||||||| ||
Sbjct: 637 gacatcactgaactatgaaccagttcatcagagttcttatattcctttgccagcctctga 696
Query: 655 taacatgtactggttttcctacggccagtctggctttgacatacgatgtgctagaatcca 714
|| ||||| |||||| |||| | ||| ||||| |||||| |||||||||||||| | ||
Sbjct: 697 tataatgtattggtttgcctatgaccattctggttttgacgtacgatgtgctagagtgca 756
Query: 715 cattctagggtt 726
|||||| |||||
Sbjct: 757 cattcttgggtt 768
Score = 119 bits (60), Expect = 3e-23
Identities = 156/188 (82%)
Strand = Plus / Plus
Query: 979 tcaatcaagtggaacagaacttccattaccgtgtaaccatggacttgcacaaaccatatt 1038
|||||| || |||||| |||| ||||| || || |||||||| |||| ||||||||||||
Sbjct: 1397 tcaatccagaggaacaaaactaccattgccatgcaaccatggccttgaacaaaccatatt 1456
Query: 1039 tggatcatatagcaatgtggattctgttgtcgaatgggatgatgttgtgttagcacttgc 1098
||||||| ||| ||||| || || | | |||||| |||| ||| ||||| | |
Sbjct: 1457 tggatcacataagaatgtagagattgattttgaatggagtgattttgaattagccgtatc 1516
Query: 1099 tatgtgggagaattattcagaagaactgaagagaaagttgtcgacatttttgccatattg 1158
||||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||||
Sbjct: 1517 tatgtgggagaattattcagaagaattgcagagaaagctgttgacatttttgccatattg 1576
Query: 1159 gctgtcca 1166
||||||||
Sbjct: 1577 gctgtcca 1584
Score = 99.6 bits (50), Expect = 3e-17
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 782 gatgacctcatagagttgcttgggaagccactgcgaattgggaggggagatgatgtcttt 841
||||||| ||||||||||||||||||||| | ||| |||| ||||||||||||||||||
Sbjct: 821 gatgaccctatagagttgcttgggaagccagtacgacttggtaggggagatgatgtcttt 880
Query: 842 ggcaagatatttgccaacagcttgcatgctcttcaggt 879
| ||| | |||||||| |||||||||||||||||||
Sbjct: 881 gacaaagtttttgccaatggcttgcatgctcttcaggt 918
Score = 91.7 bits (46), Expect = 7e-15
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 875 caggtggtgcaattttactactggaaagcacctgagctggcagcaaggagaaaccagact 934
||||||||||| ||||||||||||||||||||||||||| |||||| ||| || || |||
Sbjct: 1302 caggtggtgcagttttactactggaaagcacctgagctgtcagcaaagaggaaacaaact 1361
Query: 935 aatggtggttcagaaacagtttgctatcct 964
||||||||||| |||||| |||| ||||
Sbjct: 1362 tctggtggttcaggaacagtctgctgtcct 1391
>dbj|AK073387.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033043K11, full
insert sequence
Length = 2343
Score = 391 bits (197), Expect = e-105
Identities = 275/301 (91%)
Strand = Plus / Plus
Query: 116 ttcctctcccccgagacctgcaaggagctggagttcgtccactggagctgcgggacggcg 175
||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 99 ttcctctccccggagacctgcaaggagctggagttcgtgcaccggagctgcggcacggcc 158
Query: 176 gggtaccggccttcggtggtgtctacatcgctgccgcatctggctgccaccggctgcggc 235
|||||||| |||||||||||||| || ||||| ||||| |||||||||||||||||||||
Sbjct: 159 gggtaccgcccttcggtggtgtcgacgtcgcttccgcacctggctgccaccggctgcggc 218
Query: 236 cacctactcctccccttcgtgcccatccgcgagcgactccgcgatgccgtcgagtccttc 295
||||| |||||||| ||||| ||| |||||||||| |||||||| ||||||||||| |
Sbjct: 219 cacctcctcctcccgttcgtccccgtccgcgagcggctccgcgacgccgtcgagtcggcc 278
Query: 296 ttctcctgccacttcgacctcttcgtcgagttcaccggactagtcagttggtgcaagggt 355
|||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||
Sbjct: 279 ttctcctgccacttcgacctcttcatcgagttcaccgggctcatcagttggtgcaaggga 338
Query: 356 gcttctattggatggcacagtgacgacaacaaaccttatcttaggcaaagagccttcacg 415
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 339 gcttctattgggtggcacagtgatgacaacaaaccttatcttaggcaaagagccttcacg 398
Query: 416 g 416
|
Sbjct: 399 g 399
Score = 238 bits (120), Expect = 5e-59
Identities = 264/312 (84%)
Strand = Plus / Plus
Query: 415 ggatggtgaaccctcctctgttattccagttgccggtgatgctgtcatctacactgctga 474
|||||||||||| |||| | ||| ||||||||| ||||||| ||||||||||||||| ||
Sbjct: 458 ggatggtgaaccttcctttattactccagttgctggtgatgttgtcatctacactgcaga 517
Query: 475 taatcgtaatgtgcattgtgtagatgaggtaactgagggtgaaaggctcacgcttactct 534
|||| ||||| ||||||||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 518 taatagtaatacccattgtgtagatgaggtgactgaaggtgaaagactcaccctaactct 577
Query: 535 ttggttcaccagagacagtacctttgatgaggatccaaagctccttagttttctctccca 594
||||||||||||||||||| | | ||| ||||| |||||||||||| ||||| || ||
Sbjct: 578 ttggttcaccagagacagtgcttatgacgaggacccaaagctcctttcctttctttctca 637
Query: 595 ggcatcactgagctatgagccagctgatcagaactcttacattcctctgccagcctcaga 654
| ||||||||| |||||| |||| | |||||| ||||| |||||| |||||||||| ||
Sbjct: 638 gacatcactgaactatgaaccagttcatcagagttcttatattcctttgccagcctctga 697
Query: 655 taacatgtactggttttcctacggccagtctggctttgacatacgatgtgctagaatcca 714
|| ||||| |||||| |||| | ||| ||||| |||||| |||||||||||||| | ||
Sbjct: 698 tataatgtattggtttgcctatgaccattctggttttgacgtacgatgtgctagagtgca 757
Query: 715 cattctagggtt 726
|||||| |||||
Sbjct: 758 cattcttgggtt 769
Score = 119 bits (60), Expect = 3e-23
Identities = 156/188 (82%)
Strand = Plus / Plus
Query: 979 tcaatcaagtggaacagaacttccattaccgtgtaaccatggacttgcacaaaccatatt 1038
|||||| || |||||| |||| ||||| || || |||||||| |||| ||||||||||||
Sbjct: 1398 tcaatccagaggaacaaaactaccattgccatgcaaccatggccttgaacaaaccatatt 1457
Query: 1039 tggatcatatagcaatgtggattctgttgtcgaatgggatgatgttgtgttagcacttgc 1098
||||||| ||| ||||| || || | | |||||| |||| ||| ||||| | |
Sbjct: 1458 tggatcacataagaatgtagagattgattttgaatggagtgattttgaattagccgtatc 1517
Query: 1099 tatgtgggagaattattcagaagaactgaagagaaagttgtcgacatttttgccatattg 1158
||||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||||
Sbjct: 1518 tatgtgggagaattattcagaagaattgcagagaaagctgttgacatttttgccatattg 1577
Query: 1159 gctgtcca 1166
||||||||
Sbjct: 1578 gctgtcca 1585
Score = 99.6 bits (50), Expect = 3e-17
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 782 gatgacctcatagagttgcttgggaagccactgcgaattgggaggggagatgatgtcttt 841
||||||| ||||||||||||||||||||| | ||| |||| ||||||||||||||||||
Sbjct: 822 gatgaccctatagagttgcttgggaagccagtacgacttggtaggggagatgatgtcttt 881
Query: 842 ggcaagatatttgccaacagcttgcatgctcttcaggt 879
| ||| | |||||||| |||||||||||||||||||
Sbjct: 882 gacaaagtttttgccaatggcttgcatgctcttcaggt 919
Score = 91.7 bits (46), Expect = 7e-15
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 875 caggtggtgcaattttactactggaaagcacctgagctggcagcaaggagaaaccagact 934
||||||||||| ||||||||||||||||||||||||||| |||||| ||| || || |||
Sbjct: 1303 caggtggtgcagttttactactggaaagcacctgagctgtcagcaaagaggaaacaaact 1362
Query: 935 aatggtggttcagaaacagtttgctatcct 964
||||||||||| |||||| |||| ||||
Sbjct: 1363 tctggtggttcaggaacagtctgctgtcct 1392
>gb|AC118981.1 | Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0060E18, from chromosome 3, complete sequence
Length = 147983
Score = 238 bits (120), Expect = 5e-59
Identities = 177/196 (90%)
Strand = Plus / Minus
Query: 138 aggagctggagttcgtccactggagctgcgggacggcggggtaccggccttcggtggtgt 197
|||||||||||||||| ||| |||||||||| ||||| |||||||| |||||||||||||
Sbjct: 49496 aggagctggagttcgtgcaccggagctgcggcacggccgggtaccgcccttcggtggtgt 49437
Query: 198 ctacatcgctgccgcatctggctgccaccggctgcggccacctactcctccccttcgtgc 257
| || ||||| ||||| |||||||||||||||||||||||||| |||||||| ||||| |
Sbjct: 49436 cgacgtcgcttccgcacctggctgccaccggctgcggccacctcctcctcccgttcgtcc 49377
Query: 258 ccatccgcgagcgactccgcgatgccgtcgagtccttcttctcctgccacttcgacctct 317
|| |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 49376 ccgtccgcgagcggctccgcgacgccgtcgagtcggccttctcctgccacttcgacctct 49317
Query: 318 tcgtcgagttcaccgg 333
|| |||||||||||||
Sbjct: 49316 tcatcgagttcaccgg 49301
Score = 155 bits (78), Expect = 5e-34
Identities = 189/226 (83%)
Strand = Plus / Minus
Query: 501 aggtaactgagggtgaaaggctcacgcttactctttggttcaccagagacagtacctttg 560
|||| ||||| |||||||| ||||| || |||||||||||||||||||||||| | | ||
Sbjct: 47611 aggtgactgaaggtgaaagactcaccctaactctttggttcaccagagacagtgcttatg 47552
Query: 561 atgaggatccaaagctccttagttttctctcccaggcatcactgagctatgagccagctg 620
| ||||| |||||||||||| ||||| || ||| ||||||||| |||||| |||| |
Sbjct: 47551 acgaggacccaaagctcctttcctttctttctcagacatcactgaactatgaaccagttc 47492
Query: 621 atcagaactcttacattcctctgccagcctcagataacatgtactggttttcctacggcc 680
|||||| ||||| |||||| |||||||||| |||| ||||| |||||| |||| | ||
Sbjct: 47491 atcagagttcttatattcctttgccagcctctgatataatgtattggtttgcctatgacc 47432
Query: 681 agtctggctttgacatacgatgtgctagaatccacattctagggtt 726
| ||||| |||||| |||||||||||||| | |||||||| |||||
Sbjct: 47431 attctggttttgacgtacgatgtgctagagtgcacattcttgggtt 47386
Score = 129 bits (65), Expect = 3e-26
Identities = 74/77 (96%)
Strand = Plus / Minus
Query: 340 cagttggtgcaagggtgcttctattggatggcacagtgacgacaacaaaccttatcttag 399
||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 48729 cagttggtgcaagggagcttctattgggtggcacagtgatgacaacaaaccttatcttag 48670
Query: 400 gcaaagagccttcacgg 416
|||||||||||||||||
Sbjct: 48669 gcaaagagccttcacgg 48653
Score = 119 bits (60), Expect = 3e-23
Identities = 156/188 (82%)
Strand = Plus / Minus
Query: 979 tcaatcaagtggaacagaacttccattaccgtgtaaccatggacttgcacaaaccatatt 1038
|||||| || |||||| |||| ||||| || || |||||||| |||| ||||||||||||
Sbjct: 46757 tcaatccagaggaacaaaactaccattgccatgcaaccatggccttgaacaaaccatatt 46698
Query: 1039 tggatcatatagcaatgtggattctgttgtcgaatgggatgatgttgtgttagcacttgc 1098
||||||| ||| ||||| || || | | |||||| |||| ||| ||||| | |
Sbjct: 46697 tggatcacataagaatgtagagattgattttgaatggagtgattttgaattagccgtatc 46638
Query: 1099 tatgtgggagaattattcagaagaactgaagagaaagttgtcgacatttttgccatattg 1158
||||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||||
Sbjct: 46637 tatgtgggagaattattcagaagaattgcagagaaagctgttgacatttttgccatattg 46578
Query: 1159 gctgtcca 1166
||||||||
Sbjct: 46577 gctgtcca 46570
Score = 99.6 bits (50), Expect = 3e-17
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 782 gatgacctcatagagttgcttgggaagccactgcgaattgggaggggagatgatgtcttt 841
||||||| ||||||||||||||||||||| | ||| |||| ||||||||||||||||||
Sbjct: 47333 gatgaccctatagagttgcttgggaagccagtacgacttggtaggggagatgatgtcttt 47274
Query: 842 ggcaagatatttgccaacagcttgcatgctcttcaggt 879
| ||| | |||||||| |||||||||||||||||||
Sbjct: 47273 gacaaagtttttgccaatggcttgcatgctcttcaggt 47236
Score = 91.7 bits (46), Expect = 7e-15
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 875 caggtggtgcaattttactactggaaagcacctgagctggcagcaaggagaaaccagact 934
||||||||||| ||||||||||||||||||||||||||| |||||| ||| || || |||
Sbjct: 46852 caggtggtgcagttttactactggaaagcacctgagctgtcagcaaagaggaaacaaact 46793
Query: 935 aatggtggttcagaaacagtttgctatcct 964
||||||||||| |||||| |||| ||||
Sbjct: 46792 tctggtggttcaggaacagtctgctgtcct 46763
Score = 60.0 bits (30), Expect = 2e-05
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 452 gatgctgtcatctacactgctgataatcgtaatgtgcattgtgtagatgaggta 505
|||| ||||||||||||||| |||||| ||||| ||||||||||||||||||
Sbjct: 48051 gatgttgtcatctacactgcagataatagtaatacccattgtgtagatgaggta 47998
Score = 42.1 bits (21), Expect = 5.6
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 116 ttcctctcccccgagacctgcaagg 140
||||||||||| |||||||||||||
Sbjct: 49612 ttcctctccccggagacctgcaagg 49588
>dbj|AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
Length = 36192742
Score = 238 bits (120), Expect = 5e-59
Identities = 177/196 (90%)
Strand = Plus / Minus
Query: 138 aggagctggagttcgtccactggagctgcgggacggcggggtaccggccttcggtggtgt 197
|||||||||||||||| ||| |||||||||| ||||| |||||||| |||||||||||||
Sbjct: 7296135 aggagctggagttcgtgcaccggagctgcggcacggccgggtaccgcccttcggtggtgt 7296076
Query: 198 ctacatcgctgccgcatctggctgccaccggctgcggccacctactcctccccttcgtgc 257
| || ||||| ||||| |||||||||||||||||||||||||| |||||||| ||||| |
Sbjct: 7296075 cgacgtcgcttccgcacctggctgccaccggctgcggccacctcctcctcccgttcgtcc 7296016
Query: 258 ccatccgcgagcgactccgcgatgccgtcgagtccttcttctcctgccacttcgacctct 317
|| |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 7296015 ccgtccgcgagcggctccgcgacgccgtcgagtcggccttctcctgccacttcgacctct 7295956
Query: 318 tcgtcgagttcaccgg 333
|| |||||||||||||
Sbjct: 7295955 tcatcgagttcaccgg 7295940
Score = 155 bits (78), Expect = 5e-34
Identities = 189/226 (83%)
Strand = Plus / Minus
Query: 501 aggtaactgagggtgaaaggctcacgcttactctttggttcaccagagacagtacctttg 560
|||| ||||| |||||||| ||||| || |||||||||||||||||||||||| | | ||
Sbjct: 7294250 aggtgactgaaggtgaaagactcaccctaactctttggttcaccagagacagtgcttatg 7294191
Query: 561 atgaggatccaaagctccttagttttctctcccaggcatcactgagctatgagccagctg 620
| ||||| |||||||||||| ||||| || ||| ||||||||| |||||| |||| |
Sbjct: 7294190 acgaggacccaaagctcctttcctttctttctcagacatcactgaactatgaaccagttc 7294131
Query: 621 atcagaactcttacattcctctgccagcctcagataacatgtactggttttcctacggcc 680
|||||| ||||| |||||| |||||||||| |||| ||||| |||||| |||| | ||
Sbjct: 7294130 atcagagttcttatattcctttgccagcctctgatataatgtattggtttgcctatgacc 7294071
Query: 681 agtctggctttgacatacgatgtgctagaatccacattctagggtt 726
| ||||| |||||| |||||||||||||| | |||||||| |||||
Sbjct: 7294070 attctggttttgacgtacgatgtgctagagtgcacattcttgggtt 7294025
Score = 129 bits (65), Expect = 3e-26
Identities = 74/77 (96%)
Strand = Plus / Minus
Query: 340 cagttggtgcaagggtgcttctattggatggcacagtgacgacaacaaaccttatcttag 399
||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 7295368 cagttggtgcaagggagcttctattgggtggcacagtgatgacaacaaaccttatcttag 7295309
Query: 400 gcaaagagccttcacgg 416
|||||||||||||||||
Sbjct: 7295308 gcaaagagccttcacgg 7295292
Score = 119 bits (60), Expect = 3e-23
Identities = 156/188 (82%)
Strand = Plus / Minus
Query: 979 tcaatcaagtggaacagaacttccattaccgtgtaaccatggacttgcacaaaccatatt 1038
|||||| || |||||| |||| ||||| || || |||||||| |||| ||||||||||||
Sbjct: 7293396 tcaatccagaggaacaaaactaccattgccatgcaaccatggccttgaacaaaccatatt 7293337
Query: 1039 tggatcatatagcaatgtggattctgttgtcgaatgggatgatgttgtgttagcacttgc 1098
||||||| ||| ||||| || || | | |||||| |||| ||| ||||| | |
Sbjct: 7293336 tggatcacataagaatgtagagattgattttgaatggagtgattttgaattagccgtatc 7293277
Query: 1099 tatgtgggagaattattcagaagaactgaagagaaagttgtcgacatttttgccatattg 1158
||||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||||
Sbjct: 7293276 tatgtgggagaattattcagaagaattgcagagaaagctgttgacatttttgccatattg 7293217
Query: 1159 gctgtcca 1166
||||||||
Sbjct: 7293216 gctgtcca 7293209
Score = 99.6 bits (50), Expect = 3e-17
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 782 gatgacctcatagagttgcttgggaagccactgcgaattgggaggggagatgatgtcttt 841
||||||| ||||||||||||||||||||| | ||| |||| ||||||||||||||||||
Sbjct: 7293972 gatgaccctatagagttgcttgggaagccagtacgacttggtaggggagatgatgtcttt 7293913
Query: 842 ggcaagatatttgccaacagcttgcatgctcttcaggt 879
| ||| | |||||||| |||||||||||||||||||
Sbjct: 7293912 gacaaagtttttgccaatggcttgcatgctcttcaggt 7293875
Score = 91.7 bits (46), Expect = 7e-15
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 875 caggtggtgcaattttactactggaaagcacctgagctggcagcaaggagaaaccagact 934
||||||||||| ||||||||||||||||||||||||||| |||||| ||| || || |||
Sbjct: 7293491 caggtggtgcagttttactactggaaagcacctgagctgtcagcaaagaggaaacaaact 7293432
Query: 935 aatggtggttcagaaacagtttgctatcct 964
||||||||||| |||||| |||| ||||
Sbjct: 7293431 tctggtggttcaggaacagtctgctgtcct 7293402
Score = 60.0 bits (30), Expect = 2e-05
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 452 gatgctgtcatctacactgctgataatcgtaatgtgcattgtgtagatgaggta 505
|||| ||||||||||||||| |||||| ||||| ||||||||||||||||||
Sbjct: 7294690 gatgttgtcatctacactgcagataatagtaatacccattgtgtagatgaggta 7294637
Score = 42.1 bits (21), Expect = 5.6
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 116 ttcctctcccccgagacctgcaagg 140
||||||||||| |||||||||||||
Sbjct: 7296251 ttcctctccccggagacctgcaagg 7296227
Score = 42.1 bits (21), Expect = 5.6
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 707 agaatccacattctagggttt 727
|||||||||||||||||||||
Sbjct: 31422569 agaatccacattctagggttt 31422589
>gb|AC124094.4 | Homo sapiens chromosome 15, clone RP11-1203N1, complete sequence
Length = 139165
Score = 42.1 bits (21), Expect = 5.6
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 486 tgcattgtgtagatgaggtaactga 510
|||||| ||||||||||||||||||
Sbjct: 111013 tgcattttgtagatgaggtaactga 110989
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 258,008,319
Number of extensions: 13656153
Number of successful extensions: 273626
Number of sequences better than 10.0: 52
Number of HSP's gapped: 273626
Number of HSP's successfully gapped: 82
Length of query: 1462
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1439
Effective length of database: 18,503,978,556
Effective search space: 26627225142084
Effective search space used: 26627225142084
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)