ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf39l04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK107276:Os03g0723400 | 208 | 3e-54 | 2 | Os05g0422600:Os05g0422600 | 32 | 0.75 | 3 | Os03g0709500:Os03g0709500 | 32 | 0.75 | 4 | AK106072:Os01g0678400 | 30 | 1.7 | 5 | Os12g0429600:Os12g0429600 | 30 | 2.8 | 6 | AK068978:Os07g0240200 | 29 | 3.7 | 7 | AK121598:Os05g0130500 | 29 | 4.9 | 8 | AK103973:Os08g0159000 | 28 | 6.3 | 9 | AK073617:Os08g0159000 | 28 | 6.3 | 10 | AK121776:Os11g0518900 | 28 | 8.3 | 11 | AK103828:Os12g0624800 | 28 | 8.3 | 12 | AK102677:Os11g0518900 | 28 | 8.3 | 13 | AK101922:Os01g0672400 | 28 | 8.3 | 14 | AK064817:Os01g0672400 | 28 | 8.3 | 15 | AK063772:Os11g0518900 | 28 | 8.3 | 16 | AK061329:Os01g0672400 | 28 | 8.3 | 17 | AK060901:Os01g0672400 | 28 | 8.3 |
|---|
>AK107276:Os03g0723400 | Length = 173 Score = 208 bits (530), Expect = 3e-54 Identities = 111/176 (63%), Positives = 124/176 (70%), Gaps = 5/176 (2%) Frame = +1 Query: 40 MYSLRLATSGSTALGFALGRKTXXXXXXXXXXXLVNLVAPATAAQVGR-RRSVSATSNAA 216 MYSLRLA+SGST LGFALGR L A +++ R RR+VS T NAA Sbjct: 1 MYSLRLASSGSTGLGFALGRLGGRSGGGGGGGGLAPASASSSSVVSARTRRTVSVTPNAA 60 Query: 217 APVPGDQDFGMDPAKQQHHLPKAQAG----EQQGNASEDTHKTTTAHGDVMTHSFGEGYS 384 AP PG+Q M+ KQQH P E++G+ +D HKTT GDVMTHSFGEGYS Sbjct: 61 APTPGEQGVAMEQGKQQHQPPPPSQPQPQQEKRGSRDDDMHKTT---GDVMTHSFGEGYS 117 Query: 385 TRSDEEGFGGVYGQNDPVLNPGTEMHPNHPEYDKSQGSEVKEKEKARHLKDDKHAT 552 TRSDEEGFGGVYGQNDPV NPGTE+HP+HPEYD SQGSEVKEKEKARH KDDKHAT Sbjct: 118 TRSDEEGFGGVYGQNDPVFNPGTEVHPSHPEYDTSQGSEVKEKEKARHHKDDKHAT 173
>Os05g0422600:Os05g0422600 | Length = 660 Score = 31.6 bits (70), Expect = 0.75 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +1 Query: 250 DPAKQQHHLPKAQAGEQQG-NASEDTHKTTTAHGDVMTHSFGEGYSTR 390 D +K HH K AG+ G +AS + + T T H H+ G G T+ Sbjct: 306 DLSKNMHHKEKYNAGQFSGLHASSNIYSTETMHLATKIHTEGSGTKTK 353
>Os03g0709500:Os03g0709500 | Length = 410 Score = 31.6 bits (70), Expect = 0.75 Identities = 32/137 (23%), Positives = 46/137 (33%), Gaps = 3/137 (2%) Frame = +1 Query: 139 LVNLVAPATAAQVGRRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAGEQQGNASE 318 L N + PA + + A P DF D A+Q+ Sbjct: 195 LTNPINPAANEFADANIEIDTAHSVATEDPAGIDFDADSAEQEPD--------------- 239 Query: 319 DTHKTTTAHGDVMTHSFG---EGYSTRSDEEGFGGVYGQNDPVLNPGTEMHPNHPEYDKS 489 T + G V THS G G TR +E G D ++ PGT E S Sbjct: 240 ----TFLSPGSVHTHSPGPHHSGADTRQHQETHAG-----DRIILPGTARQEAQGEQRSS 290 Query: 490 QGSEVKEKEKARHLKDD 540 +++ + + L DD Sbjct: 291 PSADLSSADPSSSLSDD 307
>AK106072:Os01g0678400 | Length = 546 Score = 30.4 bits (67), Expect = 1.7 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 1/83 (1%) Frame = +1 Query: 148 LVAPATAAQVGRRRSVSATSNAAAPVPG-DQDFGMDPAKQQHHLPKAQAGEQQGNASEDT 324 LV AT + S +S A+P P DQ G+D A + +G G +E Sbjct: 21 LVLSATTTTLSTALSGPYSSRCASPSPAADQHTGVDDASALLRSFRITSGIFSGEGAETL 80 Query: 325 HKTTTAHGDVMTHSFGEGYSTRS 393 + + V HSF + ++ RS Sbjct: 81 FSPRSYYSIVGQHSFTDSFARRS 103
>Os12g0429600:Os12g0429600 | Length = 1597 Score = 29.6 bits (65), Expect = 2.8 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -3 Query: 455 SVPGLSTGSFWP*TPPNPSSSDLVEYPSPN 366 ++PG GS P TPP+P++S L+ P P+ Sbjct: 930 AIPGAGAGS--PATPPSPAASPLMTAPGPS 957
>AK068978:Os07g0240200 | Length = 501 Score = 29.3 bits (64), Expect = 3.7 Identities = 23/93 (24%), Positives = 35/93 (37%) Frame = +1 Query: 154 APATAAQVGRRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAGEQQGNASEDTHKT 333 APA ++ VG++ S AT AP P D + + E++ +D T Sbjct: 388 APAPSS-VGKKVSTKAT----APAPSDDGSASPEPSEGESADEKNPEEEEEEEGDDAAAT 442 Query: 334 TTAHGDVMTHSFGEGYSTRSDEEGFGGVYGQND 432 TT GD + + EG +G D Sbjct: 443 TTPGGDGDSPETEAAGDDAKESEGKNNPHGHGD 475
>AK121598:Os05g0130500 | Length = 130 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 11/54 (20%) Frame = +1 Query: 178 GRRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLP-----------KAQAGEQQG 306 G RR +A + P+P G +PA + HH P +A AG Q+G Sbjct: 66 GHRRDDAALDASPLPLPQPCPGGAEPASRSHHRPRTMVTTTTRRRRAAAGGQEG 119
>AK103973:Os08g0159000 | Length = 325 Score = 28.5 bits (62), Expect = 6.3 Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 9/95 (9%) Frame = +1 Query: 157 PATAAQVGRRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAG----EQQGNASEDT 324 PA ++ GRR+S S+ P P D + P +H A A G A ED Sbjct: 114 PAPTSRRGRRQSSSSNPTPPPPKPSDP---IAPPPPRHAAAAAAAAATAVSDGGEAVEDA 170 Query: 325 HKTTTAHGDVM-----THSFGEGYSTRSDEEGFGG 414 + T D++ H GE FGG Sbjct: 171 GEWTDQEMDILRRQMVKHPAGEPQRWEKIAAAFGG 205
>AK073617:Os08g0159000 | Length = 325 Score = 28.5 bits (62), Expect = 6.3 Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 9/95 (9%) Frame = +1 Query: 157 PATAAQVGRRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAG----EQQGNASEDT 324 PA ++ GRR+S S+ P P D + P +H A A G A ED Sbjct: 114 PAPTSRRGRRQSSSSNPTPPPPKPSDP---IAPPPPRHAAAAAAAAATAVSDGGEAVEDA 170 Query: 325 HKTTTAHGDVM-----THSFGEGYSTRSDEEGFGG 414 + T D++ H GE FGG Sbjct: 171 GEWTDQEMDILRRQMVKHPAGEPQRWEKIAAAFGG 205
>AK121776:Os11g0518900 | Length = 977 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +1 Query: 760 DFSCTPHACVRGEIRSSECFTKAPM 834 DF CTP + G I ++CFT+ M Sbjct: 395 DFKCTPSTSLVGYILLNDCFTRLSM 419
>AK103828:Os12g0624800 | Length = 587 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = +1 Query: 724 SFFLQEALDVRDDFSCTPHACVRGEIRSSECFTKAPMTFLCSS 852 S L + D+RDD SC H+C + S F C S Sbjct: 303 SHSLMDDADIRDDGSCDSHSCDLNSVHLSTDFDSQHSVGQCGS 345
>AK102677:Os11g0518900 | Length = 764 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +1 Query: 760 DFSCTPHACVRGEIRSSECFTKAPM 834 DF CTP + G I ++CFT+ M Sbjct: 395 DFKCTPSTSLVGYILLNDCFTRLSM 419
>AK101922:Os01g0672400 | Length = 246 Score = 28.1 bits (61), Expect = 8.3 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 4/86 (4%) Frame = +1 Query: 274 LPKAQAGEQQGNASEDTHKTTTA---HGDVMTHSFGEGYST-RSDEEGFGGVYGQNDPVL 441 L AQ G TTA D + SFG G+ST S+E V +D + Sbjct: 140 LRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFSTLDSEERSKAPVPIPDDTSI 199 Query: 442 NPGTEMHPNHPEYDKSQGSEVKEKEK 519 + T P D S SE +E+++ Sbjct: 200 HKDTPAQPWESRIDSSLTSEEREQKR 225
>AK064817:Os01g0672400 | Length = 143 Score = 28.1 bits (61), Expect = 8.3 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 4/86 (4%) Frame = +1 Query: 274 LPKAQAGEQQGNASEDTHKTTTA---HGDVMTHSFGEGYST-RSDEEGFGGVYGQNDPVL 441 L AQ G TTA D + SFG G+ST S+E V +D + Sbjct: 37 LRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFSTLDSEERSKAPVPIPDDTSI 96 Query: 442 NPGTEMHPNHPEYDKSQGSEVKEKEK 519 + T P D S SE +E+++ Sbjct: 97 HKDTPAQPWESRIDSSLTSEEREQKR 122
>AK063772:Os11g0518900 | Length = 977 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +1 Query: 760 DFSCTPHACVRGEIRSSECFTKAPM 834 DF CTP + G I ++CFT+ M Sbjct: 395 DFKCTPSTSLVGYILLNDCFTRLSM 419
>AK061329:Os01g0672400 | Length = 246 Score = 28.1 bits (61), Expect = 8.3 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 4/86 (4%) Frame = +1 Query: 274 LPKAQAGEQQGNASEDTHKTTTA---HGDVMTHSFGEGYST-RSDEEGFGGVYGQNDPVL 441 L AQ G TTA D + SFG G+ST S+E V +D + Sbjct: 140 LRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFSTLDSEERSKAPVPIPDDTSI 199 Query: 442 NPGTEMHPNHPEYDKSQGSEVKEKEK 519 + T P D S SE +E+++ Sbjct: 200 HKDTPAQPWESRIDSSLTSEEREQKR 225
>AK060901:Os01g0672400 | Length = 246 Score = 28.1 bits (61), Expect = 8.3 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 4/86 (4%) Frame = +1 Query: 274 LPKAQAGEQQGNASEDTHKTTTA---HGDVMTHSFGEGYST-RSDEEGFGGVYGQNDPVL 441 L AQ G TTA D + SFG G+ST S+E V +D + Sbjct: 140 LRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFSTLDSEERSKAPVPIPDDTSI 199 Query: 442 NPGTEMHPNHPEYDKSQGSEVKEKEK 519 + T P D S SE +E+++ Sbjct: 200 HKDTPAQPWESRIDSSLTSEEREQKR 225 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,447,317 Number of extensions: 348301 Number of successful extensions: 1260 Number of sequences better than 10.0: 17 Number of HSP's gapped: 1251 Number of HSP's successfully gapped: 17 Length of query: 289 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 189 Effective length of database: 11,395,755 Effective search space: 2153797695 Effective search space used: 2153797695 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
